HEADER TRANSPORT PROTEIN 27-JUL-18 6E7V TITLE HETERODIMER OF THE GLUN1B-GLUN2B NMDA RECEPTOR AMINO-TERMINAL DOMAINS TITLE 2 BOUND TO ALLOSTERIC INHIBITOR 93-88 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: EXTRACELLULAR RESIDUES 23-407; COMPND 5 SYNONYM: GLUN1,N-METHYL-D-ASPARTATE RECEPTOR SUBUNIT NR1,NMD-R1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: EXTRACELLULAR RESIDUES 32-394; COMPND 12 SYNONYM: GLUN2B,GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2,N-METHYL COMPND 13 D-ASPARTATE RECEPTOR SUBTYPE 2B,NR2B; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: GRIN1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 12 ORGANISM_COMMON: RAT; SOURCE 13 ORGANISM_TAXID: 10116; SOURCE 14 GENE: GRIN2B; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NMDA RECEPTOR, ION CHANNEL, ALLOSTERIC MODULATION, EXTRACELLULAR KEYWDS 2 DOMAIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.C.REGAN,H.FURUKAWA REVDAT 5 09-OCT-24 6E7V 1 REMARK REVDAT 4 11-OCT-23 6E7V 1 HETSYN LINK REVDAT 3 29-JUL-20 6E7V 1 CAVEAT COMPND REMARK HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 27-NOV-19 6E7V 1 REMARK REVDAT 1 30-JAN-19 6E7V 0 JRNL AUTH M.C.REGAN,H.FURUKAWA JRNL TITL STRUCTURAL ELEMENTS OF A PH-SENSITIVE INHIBITOR BINDING SITE JRNL TITL 2 IN NMDA RECEPTORS JRNL REF NAT COMMUN V. 10 321 2019 JRNL REFN ESSN 2041-1723 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 73.6 REMARK 3 NUMBER OF REFLECTIONS : 44677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2326 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 936 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 21.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10917 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 205 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.68000 REMARK 3 B22 (A**2) : -0.18000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.65000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.344 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.248 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.177 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11377 ; 0.001 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 10330 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15523 ; 0.346 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 23864 ; 0.409 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1422 ; 5.707 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 455 ;33.560 ;24.352 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1762 ;13.776 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;16.253 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1820 ; 0.032 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12565 ; 0.018 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2251 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 23 A 405 1 REMARK 3 1 C 23 C 405 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 1 A (A**2): 2692 ; 4.580 ; 0.500 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 32 B 394 1 REMARK 3 1 D 32 D 394 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 2 B (A**2): 2658 ; 4.250 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 509 REMARK 3 ORIGIN FOR THE GROUP (A): 255.9357 -63.6330 141.3239 REMARK 3 T TENSOR REMARK 3 T11: 0.0358 T22: 0.1470 REMARK 3 T33: 0.0529 T12: -0.0504 REMARK 3 T13: -0.0287 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.1970 L22: 1.8986 REMARK 3 L33: 3.2208 L12: -0.5961 REMARK 3 L13: 0.7354 L23: -0.7701 REMARK 3 S TENSOR REMARK 3 S11: -0.1860 S12: 0.1739 S13: 0.1929 REMARK 3 S21: 0.0534 S22: -0.0032 S23: -0.0014 REMARK 3 S31: -0.1853 S32: 0.1344 S33: 0.1892 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 32 B 501 REMARK 3 ORIGIN FOR THE GROUP (A): 250.6800 -56.3372 174.0084 REMARK 3 T TENSOR REMARK 3 T11: 0.2422 T22: 0.1270 REMARK 3 T33: 0.0468 T12: 0.0619 REMARK 3 T13: -0.0531 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.9447 L22: 2.5454 REMARK 3 L33: 2.4673 L12: 1.2146 REMARK 3 L13: 0.6444 L23: 0.2457 REMARK 3 S TENSOR REMARK 3 S11: -0.1318 S12: -0.2685 S13: 0.0909 REMARK 3 S21: 0.3418 S22: -0.0185 S23: 0.1668 REMARK 3 S31: -0.3719 S32: -0.1877 S33: 0.1503 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 23 C 503 REMARK 3 ORIGIN FOR THE GROUP (A): 192.7694 -73.0223 183.3580 REMARK 3 T TENSOR REMARK 3 T11: 0.2012 T22: 0.1443 REMARK 3 T33: 0.1427 T12: 0.0222 REMARK 3 T13: -0.0556 T23: 0.1003 REMARK 3 L TENSOR REMARK 3 L11: 1.5035 L22: 3.4054 REMARK 3 L33: 2.9764 L12: 0.2518 REMARK 3 L13: 0.9912 L23: 1.0212 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.1057 S13: -0.0441 REMARK 3 S21: 0.4967 S22: -0.0474 S23: 0.0838 REMARK 3 S31: 0.0170 S32: -0.2239 S33: 0.0477 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 32 D 501 REMARK 3 ORIGIN FOR THE GROUP (A): 195.3629 -67.8283 150.5676 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.3498 REMARK 3 T33: 0.1093 T12: -0.0203 REMARK 3 T13: -0.0744 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 3.4726 L22: 1.1417 REMARK 3 L33: 1.2725 L12: -0.6042 REMARK 3 L13: 0.6918 L23: -0.1736 REMARK 3 S TENSOR REMARK 3 S11: -0.0943 S12: 0.4274 S13: -0.0124 REMARK 3 S21: -0.1087 S22: 0.0948 S23: -0.1553 REMARK 3 S31: -0.0577 S32: 0.2477 S33: -0.0005 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6E7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000234392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 63.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.65900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3QEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0-3.5 M SODIUM FORMATE, 0.1 M HEPES, REMARK 280 35 MM SODIUM CHLORIDE, 7 MM TRIS-HCL, 50 UM IFENPRODIL, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 134.06550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.80600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 134.06550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.80600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 98 REMARK 465 THR A 99 REMARK 465 ASP A 100 REMARK 465 LYS A 187 REMARK 465 GLU A 188 REMARK 465 SER A 189 REMARK 465 LYS A 190 REMARK 465 SER A 191 REMARK 465 LYS A 192 REMARK 465 LYS A 193 REMARK 465 ARG A 194 REMARK 465 ASN A 195 REMARK 465 TYR A 196 REMARK 465 GLU A 197 REMARK 465 ASN A 198 REMARK 465 LEU A 199 REMARK 465 ASP A 200 REMARK 465 GLN A 201 REMARK 465 LEU A 202 REMARK 465 SER A 203 REMARK 465 TYR A 204 REMARK 465 ASP A 205 REMARK 465 ASN A 206 REMARK 465 LYS A 207 REMARK 465 ARG A 208 REMARK 465 GLU A 406 REMARK 465 THR A 407 REMARK 465 GLU B 55 REMARK 465 LYS B 56 REMARK 465 ASP B 57 REMARK 465 PRO C 98 REMARK 465 THR C 99 REMARK 465 ASP C 100 REMARK 465 GLY C 186 REMARK 465 LYS C 187 REMARK 465 GLU C 188 REMARK 465 SER C 189 REMARK 465 LYS C 190 REMARK 465 SER C 191 REMARK 465 LYS C 192 REMARK 465 LYS C 193 REMARK 465 ARG C 194 REMARK 465 ASN C 195 REMARK 465 TYR C 196 REMARK 465 GLU C 197 REMARK 465 ASN C 198 REMARK 465 LEU C 199 REMARK 465 ASP C 200 REMARK 465 GLN C 201 REMARK 465 LEU C 202 REMARK 465 SER C 203 REMARK 465 TYR C 204 REMARK 465 ASP C 205 REMARK 465 ASN C 206 REMARK 465 LYS C 207 REMARK 465 ARG C 208 REMARK 465 GLU C 406 REMARK 465 THR C 407 REMARK 465 GLU D 55 REMARK 465 LYS D 56 REMARK 465 ASP D 57 REMARK 465 ASP D 58 REMARK 465 PHE D 59 REMARK 465 HIS D 60 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 ILE A 58 CD1 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 214 CE NZ REMARK 470 LYS A 223 CG CD CE NZ REMARK 470 GLU A 234 CG CD OE1 OE2 REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 MET A 258 CG SD CE REMARK 470 ARG A 281 NE CZ NH1 NH2 REMARK 470 GLU A 320 CG CD OE1 OE2 REMARK 470 LYS A 337 CG CD CE NZ REMARK 470 LYS A 350 CE NZ REMARK 470 ASP A 353 CG OD1 OD2 REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 LYS A 399 CE NZ REMARK 470 SER B 34 OG REMARK 470 ASP B 46 CG OD1 OD2 REMARK 470 GLU B 47 CD OE1 OE2 REMARK 470 VAL B 48 CG1 CG2 REMARK 470 LYS B 51 CD CE NZ REMARK 470 ASP B 58 CG OD1 OD2 REMARK 470 PHE B 59 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS B 61 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 91 CG OD1 OD2 REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 ILE B 94 CG2 REMARK 470 GLU B 139 CD OE1 OE2 REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 SER B 214 OG REMARK 470 LYS B 215 NZ REMARK 470 LYS B 221 CE NZ REMARK 470 LYS B 222 CE NZ REMARK 470 GLU B 235 CG CD OE1 OE2 REMARK 470 ASP B 283 CG OD1 OD2 REMARK 470 SER B 319 OG REMARK 470 ASN B 323 CG OD1 ND2 REMARK 470 LYS B 327 CG CD CE NZ REMARK 470 ARG B 347 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 353 CG CD OE1 OE2 REMARK 470 LYS B 361 CG CD CE NZ REMARK 470 LYS B 369 CG CD CE NZ REMARK 470 LYS B 378 CG CD CE NZ REMARK 470 LYS B 380 CG CD CE NZ REMARK 470 ASP B 381 CG OD1 OD2 REMARK 470 LYS B 382 CG CD CE NZ REMARK 470 SER B 383 OG REMARK 470 GLN B 385 CG CD OE1 NE2 REMARK 470 ARG B 393 CG CD NE CZ NH1 NH2 REMARK 470 MET B 394 CG SD CE REMARK 470 ASP C 23 CG OD1 OD2 REMARK 470 LYS C 37 CG CD CE NZ REMARK 470 LYS C 51 CD CE NZ REMARK 470 PHE C 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG C 56 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 57 CG CD CE NZ REMARK 470 LYS C 178 CD CE NZ REMARK 470 GLU C 185 CG CD OE1 OE2 REMARK 470 LYS C 211 CG CD CE NZ REMARK 470 ASN C 224 CG OD1 ND2 REMARK 470 LYS C 233 CE NZ REMARK 470 ARG C 238 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 285 CG OD1 OD2 REMARK 470 GLU C 320 CG CD OE1 OE2 REMARK 470 LYS C 337 CG CD CE NZ REMARK 470 LYS C 350 CE NZ REMARK 470 ASP C 353 CG OD1 OD2 REMARK 470 LYS C 381 CG CD CE NZ REMARK 470 TYR C 392 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP C 397 CG OD1 OD2 REMARK 470 ARG C 398 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 399 CG CD CE NZ REMARK 470 SER D 34 OG REMARK 470 THR D 44 OG1 CG2 REMARK 470 ASP D 46 CG OD1 OD2 REMARK 470 GLU D 47 CG CD OE1 OE2 REMARK 470 VAL D 48 CG1 CG2 REMARK 470 ILE D 50 CG1 CG2 CD1 REMARK 470 LYS D 51 CD CE NZ REMARK 470 ASP D 52 CG OD1 OD2 REMARK 470 ARG D 67 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 69 CG CD OE1 OE2 REMARK 470 VAL D 71 CG1 CG2 REMARK 470 ARG D 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 93 CG CD CE NZ REMARK 470 GLU D 151 CG CD OE1 OE2 REMARK 470 GLU D 162 CG CD OE1 OE2 REMARK 470 GLU D 191 CG CD OE1 OE2 REMARK 470 SER D 193 OG REMARK 470 PHE D 194 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 198 CG CD OE1 OE2 REMARK 470 ASP D 283 O REMARK 470 ARG D 294 CG CD NE CZ NH1 NH2 REMARK 470 SER D 312 OG REMARK 470 LYS D 318 CG CD CE NZ REMARK 470 SER D 319 OG REMARK 470 TYR D 322 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN D 323 CG OD1 ND2 REMARK 470 LYS D 327 CG CD CE NZ REMARK 470 GLU D 345 CG CD OE1 OE2 REMARK 470 ARG D 347 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 348 CG OD1 OD2 REMARK 470 LEU D 349 CG CD1 CD2 REMARK 470 GLU D 353 CG CD OE1 OE2 REMARK 470 HIS D 359 CG ND1 CD2 CE1 NE2 REMARK 470 LYS D 361 CG CD CE NZ REMARK 470 LYS D 369 CG CD CE NZ REMARK 470 GLU D 370 CG CD OE1 OE2 REMARK 470 LYS D 372 CG CD CE NZ REMARK 470 LYS D 378 CD CE NZ REMARK 470 LYS D 380 CG CD CE NZ REMARK 470 ASP D 381 CG OD1 OD2 REMARK 470 LYS D 382 CG CD CE NZ REMARK 470 SER D 383 OG REMARK 470 GLN D 385 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA C 232 O HOH C 601 1.73 REMARK 500 O LYS C 233 O HOH C 602 1.87 REMARK 500 O SER B 312 O HOH B 601 1.97 REMARK 500 O HOH C 646 O HOH C 651 2.15 REMARK 500 OD1 ASP B 165 O HOH B 602 2.15 REMARK 500 O SER D 312 O HOH D 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR B 389 NH1 ARG C 380 4758 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 82 -63.67 -105.58 REMARK 500 SER A 136 66.36 -151.27 REMARK 500 ASN A 224 100.39 72.56 REMARK 500 ASN A 321 40.15 73.42 REMARK 500 ASP A 353 53.29 -95.78 REMARK 500 SER A 391 -13.72 -151.63 REMARK 500 ASP B 46 89.17 -69.38 REMARK 500 PHE B 59 43.11 -78.55 REMARK 500 GLN B 224 -20.42 -141.60 REMARK 500 CYS B 232 -176.56 -174.45 REMARK 500 PRO B 270 151.78 -49.86 REMARK 500 TYR B 282 19.43 -154.20 REMARK 500 GLU B 284 65.68 68.74 REMARK 500 ASN B 323 20.92 -142.15 REMARK 500 ASN B 333 36.04 -90.16 REMARK 500 VAL B 376 14.70 -142.62 REMARK 500 LEU C 82 -63.30 -107.42 REMARK 500 SER C 136 61.89 -152.40 REMARK 500 ALA C 237 151.94 -40.45 REMARK 500 ASN C 321 45.59 70.96 REMARK 500 ASP C 353 55.01 -97.82 REMARK 500 SER C 391 -15.81 -150.29 REMARK 500 SER D 45 141.42 -171.69 REMARK 500 THR D 76 27.54 -140.33 REMARK 500 ILE D 133 124.49 -38.13 REMARK 500 ASP D 136 61.63 60.62 REMARK 500 CYS D 232 -173.28 -175.19 REMARK 500 GLU D 284 98.17 -48.30 REMARK 500 TRP D 285 -66.98 -109.70 REMARK 500 GLU D 345 -30.41 79.04 REMARK 500 LEU D 349 37.66 -80.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR D 389 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG C 501 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 137 O REMARK 620 2 ASP A 364 O 119.8 REMARK 620 3 HOH A 629 O 112.0 123.1 REMARK 620 4 HOH A 636 O 80.6 73.4 94.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 137 O REMARK 620 2 ASP C 364 O 123.7 REMARK 620 3 HOH C 622 O 88.9 76.9 REMARK 620 4 HOH C 634 O 109.5 123.8 87.7 REMARK 620 5 HOH C 651 O 88.9 106.3 176.8 90.9 REMARK 620 N 1 2 3 4 DBREF1 6E7V A 23 407 UNP NMDZ1_XENLA DBREF2 6E7V A A0A1L8F5J9 23 407 DBREF 6E7V B 32 394 UNP Q00960 NMDE2_RAT 32 394 DBREF1 6E7V C 23 407 UNP NMDZ1_XENLA DBREF2 6E7V C A0A1L8F5J9 23 407 DBREF 6E7V D 32 394 UNP Q00960 NMDE2_RAT 32 394 SEQADV 6E7V GLN A 61 UNP A0A1L8F5J ASN 61 ENGINEERED MUTATION SEQADV 6E7V GLN A 371 UNP A0A1L8F5J ASN 371 ENGINEERED MUTATION SEQADV 6E7V ASP B 348 UNP Q00960 ASN 348 ENGINEERED MUTATION SEQADV 6E7V GLN C 61 UNP A0A1L8F5J ASN 61 ENGINEERED MUTATION SEQADV 6E7V GLN C 371 UNP A0A1L8F5J ASN 371 ENGINEERED MUTATION SEQADV 6E7V ASP D 348 UNP Q00960 ASN 348 ENGINEERED MUTATION SEQRES 1 A 385 ASP PRO LYS ILE VAL ASN ILE GLY ALA VAL LEU SER THR SEQRES 2 A 385 LYS LYS HIS GLU GLN ILE PHE ARG GLU ALA VAL ASN GLN SEQRES 3 A 385 ALA ASN LYS ARG HIS PHE THR ARG LYS ILE GLN LEU GLN SEQRES 4 A 385 ALA THR SER VAL THR HIS ARG PRO ASN ALA ILE GLN MET SEQRES 5 A 385 ALA LEU SER VAL CYS GLU ASP LEU ILE SER SER GLN VAL SEQRES 6 A 385 TYR ALA ILE LEU VAL SER HIS PRO PRO ALA PRO THR ASP SEQRES 7 A 385 HIS LEU THR PRO THR PRO ILE SER TYR THR ALA GLY PHE SEQRES 8 A 385 TYR ARG ILE PRO VAL ILE GLY LEU THR THR ARG MET SER SEQRES 9 A 385 ILE TYR SER ASP LYS SER ILE HIS LEU SER PHE LEU ARG SEQRES 10 A 385 THR VAL PRO PRO TYR SER HIS GLN ALA LEU VAL TRP PHE SEQRES 11 A 385 GLU MET MET ARG LEU PHE ASN TRP ASN HIS VAL ILE LEU SEQRES 12 A 385 ILE VAL SER ASP ASP HIS GLU GLY ARG ALA ALA GLN LYS SEQRES 13 A 385 LYS LEU GLU THR LEU LEU GLU GLY LYS GLU SER LYS SER SEQRES 14 A 385 LYS LYS ARG ASN TYR GLU ASN LEU ASP GLN LEU SER TYR SEQRES 15 A 385 ASP ASN LYS ARG GLY PRO LYS ALA ASP LYS VAL LEU GLN SEQRES 16 A 385 PHE GLU PRO GLY THR LYS ASN LEU THR ALA LEU LEU LEU SEQRES 17 A 385 GLU ALA LYS GLU LEU GLU ALA ARG VAL ILE ILE LEU SER SEQRES 18 A 385 ALA SER GLU ASP ASP ALA THR ALA VAL TYR LYS SER ALA SEQRES 19 A 385 ALA MET LEU ASP MET THR GLY ALA GLY TYR VAL TRP LEU SEQRES 20 A 385 VAL GLY GLU ARG GLU ILE SER GLY SER ALA LEU ARG TYR SEQRES 21 A 385 ALA PRO ASP GLY ILE ILE GLY LEU GLN LEU ILE ASN GLY SEQRES 22 A 385 LYS ASN GLU SER ALA HIS ILE SER ASP ALA VAL ALA VAL SEQRES 23 A 385 VAL ALA GLN ALA ILE HIS GLU LEU PHE GLU MET GLU ASN SEQRES 24 A 385 ILE THR ASP PRO PRO ARG GLY CYS VAL GLY ASN THR ASN SEQRES 25 A 385 ILE TRP LYS THR GLY PRO LEU PHE LYS ARG VAL LEU MET SEQRES 26 A 385 SER SER LYS TYR PRO ASP GLY VAL THR GLY ARG ILE GLU SEQRES 27 A 385 PHE ASN GLU ASP GLY ASP ARG LYS PHE ALA GLN TYR SER SEQRES 28 A 385 ILE MET ASN LEU GLN ASN ARG LYS LEU VAL GLN VAL GLY SEQRES 29 A 385 ILE PHE ASN GLY SER TYR ILE ILE GLN ASN ASP ARG LYS SEQRES 30 A 385 ILE ILE TRP PRO GLY GLY GLU THR SEQRES 1 B 363 PRO PRO SER ILE GLY ILE ALA VAL ILE LEU VAL GLY THR SEQRES 2 B 363 SER ASP GLU VAL ALA ILE LYS ASP ALA HIS GLU LYS ASP SEQRES 3 B 363 ASP PHE HIS HIS LEU SER VAL VAL PRO ARG VAL GLU LEU SEQRES 4 B 363 VAL ALA MET ASN GLU THR ASP PRO LYS SER ILE ILE THR SEQRES 5 B 363 ARG ILE CYS ASP LEU MET SER ASP ARG LYS ILE GLN GLY SEQRES 6 B 363 VAL VAL PHE ALA ASP ASP THR ASP GLN GLU ALA ILE ALA SEQRES 7 B 363 GLN ILE LEU ASP PHE ILE SER ALA GLN THR LEU THR PRO SEQRES 8 B 363 ILE LEU GLY ILE HIS GLY GLY SER SER MET ILE MET ALA SEQRES 9 B 363 ASP LYS ASP GLU SER SER MET PHE PHE GLN PHE GLY PRO SEQRES 10 B 363 SER ILE GLU GLN GLN ALA SER VAL MET LEU ASN ILE MET SEQRES 11 B 363 GLU GLU TYR ASP TRP TYR ILE PHE SER ILE VAL THR THR SEQRES 12 B 363 TYR PHE PRO GLY TYR GLN ASP PHE VAL ASN LYS ILE ARG SEQRES 13 B 363 SER THR ILE GLU ASN SER PHE VAL GLY TRP GLU LEU GLU SEQRES 14 B 363 GLU VAL LEU LEU LEU ASP MET SER LEU ASP ASP GLY ASP SEQRES 15 B 363 SER LYS ILE GLN ASN GLN LEU LYS LYS LEU GLN SER PRO SEQRES 16 B 363 ILE ILE LEU LEU TYR CYS THR LYS GLU GLU ALA THR TYR SEQRES 17 B 363 ILE PHE GLU VAL ALA ASN SER VAL GLY LEU THR GLY TYR SEQRES 18 B 363 GLY TYR THR TRP ILE VAL PRO SER LEU VAL ALA GLY ASP SEQRES 19 B 363 THR ASP THR VAL PRO SER GLU PHE PRO THR GLY LEU ILE SEQRES 20 B 363 SER VAL SER TYR ASP GLU TRP ASP TYR GLY LEU PRO ALA SEQRES 21 B 363 ARG VAL ARG ASP GLY ILE ALA ILE ILE THR THR ALA ALA SEQRES 22 B 363 SER ASP MET LEU SER GLU HIS SER PHE ILE PRO GLU PRO SEQRES 23 B 363 LYS SER SER CYS TYR ASN THR HIS GLU LYS ARG ILE TYR SEQRES 24 B 363 GLN SER ASN MET LEU ASN ARG TYR LEU ILE ASN VAL THR SEQRES 25 B 363 PHE GLU GLY ARG ASP LEU SER PHE SER GLU ASP GLY TYR SEQRES 26 B 363 GLN MET HIS PRO LYS LEU VAL ILE ILE LEU LEU ASN LYS SEQRES 27 B 363 GLU ARG LYS TRP GLU ARG VAL GLY LYS TRP LYS ASP LYS SEQRES 28 B 363 SER LEU GLN MET LYS TYR TYR VAL TRP PRO ARG MET SEQRES 1 C 385 ASP PRO LYS ILE VAL ASN ILE GLY ALA VAL LEU SER THR SEQRES 2 C 385 LYS LYS HIS GLU GLN ILE PHE ARG GLU ALA VAL ASN GLN SEQRES 3 C 385 ALA ASN LYS ARG HIS PHE THR ARG LYS ILE GLN LEU GLN SEQRES 4 C 385 ALA THR SER VAL THR HIS ARG PRO ASN ALA ILE GLN MET SEQRES 5 C 385 ALA LEU SER VAL CYS GLU ASP LEU ILE SER SER GLN VAL SEQRES 6 C 385 TYR ALA ILE LEU VAL SER HIS PRO PRO ALA PRO THR ASP SEQRES 7 C 385 HIS LEU THR PRO THR PRO ILE SER TYR THR ALA GLY PHE SEQRES 8 C 385 TYR ARG ILE PRO VAL ILE GLY LEU THR THR ARG MET SER SEQRES 9 C 385 ILE TYR SER ASP LYS SER ILE HIS LEU SER PHE LEU ARG SEQRES 10 C 385 THR VAL PRO PRO TYR SER HIS GLN ALA LEU VAL TRP PHE SEQRES 11 C 385 GLU MET MET ARG LEU PHE ASN TRP ASN HIS VAL ILE LEU SEQRES 12 C 385 ILE VAL SER ASP ASP HIS GLU GLY ARG ALA ALA GLN LYS SEQRES 13 C 385 LYS LEU GLU THR LEU LEU GLU GLY LYS GLU SER LYS SER SEQRES 14 C 385 LYS LYS ARG ASN TYR GLU ASN LEU ASP GLN LEU SER TYR SEQRES 15 C 385 ASP ASN LYS ARG GLY PRO LYS ALA ASP LYS VAL LEU GLN SEQRES 16 C 385 PHE GLU PRO GLY THR LYS ASN LEU THR ALA LEU LEU LEU SEQRES 17 C 385 GLU ALA LYS GLU LEU GLU ALA ARG VAL ILE ILE LEU SER SEQRES 18 C 385 ALA SER GLU ASP ASP ALA THR ALA VAL TYR LYS SER ALA SEQRES 19 C 385 ALA MET LEU ASP MET THR GLY ALA GLY TYR VAL TRP LEU SEQRES 20 C 385 VAL GLY GLU ARG GLU ILE SER GLY SER ALA LEU ARG TYR SEQRES 21 C 385 ALA PRO ASP GLY ILE ILE GLY LEU GLN LEU ILE ASN GLY SEQRES 22 C 385 LYS ASN GLU SER ALA HIS ILE SER ASP ALA VAL ALA VAL SEQRES 23 C 385 VAL ALA GLN ALA ILE HIS GLU LEU PHE GLU MET GLU ASN SEQRES 24 C 385 ILE THR ASP PRO PRO ARG GLY CYS VAL GLY ASN THR ASN SEQRES 25 C 385 ILE TRP LYS THR GLY PRO LEU PHE LYS ARG VAL LEU MET SEQRES 26 C 385 SER SER LYS TYR PRO ASP GLY VAL THR GLY ARG ILE GLU SEQRES 27 C 385 PHE ASN GLU ASP GLY ASP ARG LYS PHE ALA GLN TYR SER SEQRES 28 C 385 ILE MET ASN LEU GLN ASN ARG LYS LEU VAL GLN VAL GLY SEQRES 29 C 385 ILE PHE ASN GLY SER TYR ILE ILE GLN ASN ASP ARG LYS SEQRES 30 C 385 ILE ILE TRP PRO GLY GLY GLU THR SEQRES 1 D 363 PRO PRO SER ILE GLY ILE ALA VAL ILE LEU VAL GLY THR SEQRES 2 D 363 SER ASP GLU VAL ALA ILE LYS ASP ALA HIS GLU LYS ASP SEQRES 3 D 363 ASP PHE HIS HIS LEU SER VAL VAL PRO ARG VAL GLU LEU SEQRES 4 D 363 VAL ALA MET ASN GLU THR ASP PRO LYS SER ILE ILE THR SEQRES 5 D 363 ARG ILE CYS ASP LEU MET SER ASP ARG LYS ILE GLN GLY SEQRES 6 D 363 VAL VAL PHE ALA ASP ASP THR ASP GLN GLU ALA ILE ALA SEQRES 7 D 363 GLN ILE LEU ASP PHE ILE SER ALA GLN THR LEU THR PRO SEQRES 8 D 363 ILE LEU GLY ILE HIS GLY GLY SER SER MET ILE MET ALA SEQRES 9 D 363 ASP LYS ASP GLU SER SER MET PHE PHE GLN PHE GLY PRO SEQRES 10 D 363 SER ILE GLU GLN GLN ALA SER VAL MET LEU ASN ILE MET SEQRES 11 D 363 GLU GLU TYR ASP TRP TYR ILE PHE SER ILE VAL THR THR SEQRES 12 D 363 TYR PHE PRO GLY TYR GLN ASP PHE VAL ASN LYS ILE ARG SEQRES 13 D 363 SER THR ILE GLU ASN SER PHE VAL GLY TRP GLU LEU GLU SEQRES 14 D 363 GLU VAL LEU LEU LEU ASP MET SER LEU ASP ASP GLY ASP SEQRES 15 D 363 SER LYS ILE GLN ASN GLN LEU LYS LYS LEU GLN SER PRO SEQRES 16 D 363 ILE ILE LEU LEU TYR CYS THR LYS GLU GLU ALA THR TYR SEQRES 17 D 363 ILE PHE GLU VAL ALA ASN SER VAL GLY LEU THR GLY TYR SEQRES 18 D 363 GLY TYR THR TRP ILE VAL PRO SER LEU VAL ALA GLY ASP SEQRES 19 D 363 THR ASP THR VAL PRO SER GLU PHE PRO THR GLY LEU ILE SEQRES 20 D 363 SER VAL SER TYR ASP GLU TRP ASP TYR GLY LEU PRO ALA SEQRES 21 D 363 ARG VAL ARG ASP GLY ILE ALA ILE ILE THR THR ALA ALA SEQRES 22 D 363 SER ASP MET LEU SER GLU HIS SER PHE ILE PRO GLU PRO SEQRES 23 D 363 LYS SER SER CYS TYR ASN THR HIS GLU LYS ARG ILE TYR SEQRES 24 D 363 GLN SER ASN MET LEU ASN ARG TYR LEU ILE ASN VAL THR SEQRES 25 D 363 PHE GLU GLY ARG ASP LEU SER PHE SER GLU ASP GLY TYR SEQRES 26 D 363 GLN MET HIS PRO LYS LEU VAL ILE ILE LEU LEU ASN LYS SEQRES 27 D 363 GLU ARG LYS TRP GLU ARG VAL GLY LYS TRP LYS ASP LYS SEQRES 28 D 363 SER LEU GLN MET LYS TYR TYR VAL TRP PRO ARG MET HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG A 501 14 HET NAG A 507 14 HET NA A 508 1 HET CL A 509 1 HET CL A 510 1 HET NAG B 501 14 HET T88 B 502 31 HET CL B 503 1 HET CL B 504 1 HET CL B 505 1 HET CL B 506 1 HET NAG C 501 13 HET NAG C 502 14 HET NA C 503 1 HET CL C 504 1 HET CL C 505 1 HET T88 D 502 31 HET CL D 503 1 HET CL D 504 1 HET CL D 505 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM T88 N-{4-[(2R)-3-{BUTYL[2-(3,4-DICHLOROPHENYL)ETHYL]AMINO}- HETNAM 2 T88 2-HYDROXYPROPOXY]PHENYL}METHANESULFONAMIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 7(C8 H15 N O6) FORMUL 5 BMA C6 H12 O6 FORMUL 5 MAN 2(C6 H12 O6) FORMUL 8 NA 2(NA 1+) FORMUL 9 CL 11(CL 1-) FORMUL 12 T88 2(C22 H30 CL2 N2 O4 S) FORMUL 26 HOH *243(H2 O) HELIX 1 AA1 THR A 35 HIS A 53 1 19 HELIX 2 AA2 ASN A 70 LEU A 82 1 13 HELIX 3 AA3 ILE A 83 SER A 85 5 3 HELIX 4 AA4 PRO A 104 TYR A 114 1 11 HELIX 5 AA5 MET A 125 ASP A 130 5 6 HELIX 6 AA6 PRO A 143 SER A 145 5 3 HELIX 7 AA7 HIS A 146 PHE A 158 1 13 HELIX 8 AA8 ASP A 170 GLY A 186 1 17 HELIX 9 AA9 LEU A 225 LEU A 235 1 11 HELIX 10 AB1 SER A 245 LEU A 259 1 15 HELIX 11 AB2 GLU A 272 ILE A 275 5 4 HELIX 12 AB3 SER A 276 ALA A 283 1 8 HELIX 13 AB4 ASN A 297 PHE A 317 1 21 HELIX 14 AB5 THR A 338 SER A 348 1 11 HELIX 15 AB6 ASP B 46 ALA B 53 1 8 HELIX 16 AB7 ASP B 77 ARG B 92 1 16 HELIX 17 AB8 GLU B 106 LEU B 120 1 15 HELIX 18 AB9 GLY B 128 MET B 132 5 5 HELIX 19 AC1 SER B 149 TYR B 164 1 16 HELIX 20 AC2 GLY B 178 ASN B 192 1 15 HELIX 21 AC3 SER B 214 LYS B 221 1 8 HELIX 22 AC4 THR B 233 VAL B 247 1 15 HELIX 23 AC5 PRO B 259 GLY B 264 1 6 HELIX 24 AC6 GLY B 288 SER B 312 1 25 HELIX 25 AC7 HIS B 325 GLN B 331 5 7 HELIX 26 AC8 LEU B 335 ILE B 340 1 6 HELIX 27 AC9 THR C 35 HIS C 53 1 19 HELIX 28 AD1 ASN C 70 LEU C 82 1 13 HELIX 29 AD2 ILE C 83 SER C 85 5 3 HELIX 30 AD3 PRO C 104 TYR C 114 1 11 HELIX 31 AD4 MET C 125 ASP C 130 5 6 HELIX 32 AD5 PRO C 143 SER C 145 5 3 HELIX 33 AD6 HIS C 146 PHE C 158 1 13 HELIX 34 AD7 ASP C 170 GLU C 185 1 16 HELIX 35 AD8 LEU C 225 LEU C 235 1 11 HELIX 36 AD9 SER C 245 LEU C 259 1 15 HELIX 37 AE1 GLU C 272 SER C 276 5 5 HELIX 38 AE2 GLY C 277 ALA C 283 1 7 HELIX 39 AE3 ASN C 297 GLU C 318 1 22 HELIX 40 AE4 THR C 338 SER C 348 1 11 HELIX 41 AE5 ASP D 46 ALA D 53 1 8 HELIX 42 AE6 ASP D 77 ARG D 92 1 16 HELIX 43 AE7 GLU D 106 LEU D 120 1 15 HELIX 44 AE8 GLY D 128 MET D 132 5 5 HELIX 45 AE9 SER D 149 TYR D 164 1 16 HELIX 46 AF1 GLY D 178 ASN D 192 1 15 HELIX 47 AF2 SER D 214 LYS D 221 1 8 HELIX 48 AF3 THR D 233 VAL D 247 1 15 HELIX 49 AF4 PRO D 259 GLY D 264 1 6 HELIX 50 AF5 GLY D 288 SER D 312 1 25 HELIX 51 AF6 HIS D 325 ILE D 329 5 5 HELIX 52 AF7 LEU D 335 ILE D 340 1 6 SHEET 1 AA1 5 ILE A 58 THR A 66 0 SHEET 2 AA1 5 LYS A 25 LEU A 33 1 N ILE A 29 O THR A 63 SHEET 3 AA1 5 VAL A 87 VAL A 92 1 O ALA A 89 N GLY A 30 SHEET 4 AA1 5 VAL A 118 GLY A 120 1 O ILE A 119 N ILE A 90 SHEET 5 AA1 5 PHE A 137 ARG A 139 1 O LEU A 138 N GLY A 120 SHEET 1 AA2 4 LYS A 211 PHE A 218 0 SHEET 2 AA2 4 HIS A 162 SER A 168 1 N LEU A 165 O LEU A 216 SHEET 3 AA2 4 VAL A 239 SER A 243 1 O ILE A 241 N ILE A 166 SHEET 4 AA2 4 VAL A 267 VAL A 270 1 O VAL A 267 N ILE A 240 SHEET 1 AA3 4 ILE A 288 LEU A 292 0 SHEET 2 AA3 4 TYR A 372 GLN A 378 -1 O SER A 373 N GLN A 291 SHEET 3 AA3 4 LYS A 381 PHE A 388 -1 O VAL A 383 N ASN A 376 SHEET 4 AA3 4 ILE A 393 GLN A 395 -1 O ILE A 394 N ILE A 387 SHEET 1 AA4 3 TYR A 351 GLY A 354 0 SHEET 2 AA4 3 GLY A 357 PHE A 361 -1 O ILE A 359 N TYR A 351 SHEET 3 AA4 3 ARG A 367 LYS A 368 -1 O LYS A 368 N GLU A 360 SHEET 1 AA5 5 VAL B 65 MET B 73 0 SHEET 2 AA5 5 SER B 34 VAL B 42 1 N LEU B 41 O VAL B 71 SHEET 3 AA5 5 ILE B 94 ALA B 100 1 O VAL B 98 N ILE B 40 SHEET 4 AA5 5 ILE B 123 HIS B 127 1 O LEU B 124 N PHE B 99 SHEET 5 AA5 5 PHE B 143 GLN B 145 1 O PHE B 144 N ILE B 123 SHEET 1 AA6 8 GLU B 198 LEU B 204 0 SHEET 2 AA6 8 ILE B 168 THR B 173 1 N ILE B 171 O LEU B 203 SHEET 3 AA6 8 ILE B 227 TYR B 231 1 O LEU B 229 N VAL B 172 SHEET 4 AA6 8 THR B 255 VAL B 258 1 O ILE B 257 N ILE B 228 SHEET 5 AA6 8 ILE B 278 SER B 281 1 O ILE B 278 N VAL B 258 SHEET 6 AA6 8 LEU B 362 LEU B 367 -1 O ILE B 365 N SER B 279 SHEET 7 AA6 8 TRP B 373 LYS B 380 -1 O TRP B 379 N LEU B 362 SHEET 8 AA6 8 SER B 383 MET B 386 -1 O GLN B 385 N LYS B 378 SHEET 1 AA7 2 THR B 343 PHE B 344 0 SHEET 2 AA7 2 ARG B 347 ASP B 348 -1 O ARG B 347 N PHE B 344 SHEET 1 AA8 5 ILE C 58 THR C 66 0 SHEET 2 AA8 5 LYS C 25 LEU C 33 1 N ILE C 29 O GLN C 61 SHEET 3 AA8 5 VAL C 87 VAL C 92 1 O ALA C 89 N GLY C 30 SHEET 4 AA8 5 VAL C 118 GLY C 120 1 O ILE C 119 N ILE C 90 SHEET 5 AA8 5 PHE C 137 ARG C 139 1 O LEU C 138 N GLY C 120 SHEET 1 AA9 4 LYS C 211 PHE C 218 0 SHEET 2 AA9 4 HIS C 162 SER C 168 1 N LEU C 165 O LEU C 216 SHEET 3 AA9 4 VAL C 239 SER C 243 1 O ILE C 241 N ILE C 166 SHEET 4 AA9 4 VAL C 267 LEU C 269 1 O VAL C 267 N ILE C 240 SHEET 1 AB1 4 ILE C 288 LEU C 292 0 SHEET 2 AB1 4 TYR C 372 GLN C 378 -1 O SER C 373 N GLN C 291 SHEET 3 AB1 4 LYS C 381 PHE C 388 -1 O VAL C 383 N ASN C 376 SHEET 4 AB1 4 ILE C 393 GLN C 395 -1 O ILE C 394 N ILE C 387 SHEET 1 AB2 3 TYR C 351 GLY C 354 0 SHEET 2 AB2 3 GLY C 357 PHE C 361 -1 O ILE C 359 N TYR C 351 SHEET 3 AB2 3 ARG C 367 LYS C 368 -1 O LYS C 368 N GLU C 360 SHEET 1 AB3 5 VAL D 65 MET D 73 0 SHEET 2 AB3 5 SER D 34 VAL D 42 1 N VAL D 39 O VAL D 71 SHEET 3 AB3 5 ILE D 94 ALA D 100 1 O VAL D 98 N ILE D 40 SHEET 4 AB3 5 ILE D 123 HIS D 127 1 O LEU D 124 N PHE D 99 SHEET 5 AB3 5 PHE D 143 GLN D 145 1 O PHE D 144 N GLY D 125 SHEET 1 AB4 8 GLU D 198 LEU D 204 0 SHEET 2 AB4 8 ILE D 168 THR D 173 1 N ILE D 171 O LEU D 203 SHEET 3 AB4 8 ILE D 227 TYR D 231 1 O LEU D 229 N VAL D 172 SHEET 4 AB4 8 THR D 255 VAL D 258 1 O ILE D 257 N ILE D 228 SHEET 5 AB4 8 ILE D 278 SER D 281 1 O ILE D 278 N VAL D 258 SHEET 6 AB4 8 LEU D 362 LEU D 367 -1 O ILE D 365 N SER D 279 SHEET 7 AB4 8 TRP D 373 LYS D 380 -1 O GLY D 377 N ILE D 364 SHEET 8 AB4 8 SER D 383 MET D 386 -1 O GLN D 385 N LYS D 378 SSBOND 1 CYS A 79 CYS A 329 1555 1555 2.03 SSBOND 2 CYS B 86 CYS B 321 1555 1555 2.03 SSBOND 3 CYS C 79 CYS C 329 1555 1555 2.03 SSBOND 4 CYS D 86 CYS D 321 1555 1555 2.03 LINK ND2 ASN A 297 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN A 321 C1 NAG A 507 1555 1555 1.44 LINK ND2 ASN A 389 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 74 C1 NAG B 501 1555 1555 1.44 LINK ND2 ASN C 297 C1 NAG C 501 1555 1555 1.44 LINK ND2 ASN C 389 C1 NAG C 502 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.44 LINK O PHE A 137 NA NA A 508 1555 1555 2.20 LINK O ASP A 364 NA NA A 508 1555 1555 2.43 LINK NA NA A 508 O HOH A 629 1555 1555 2.29 LINK NA NA A 508 O HOH A 636 1555 1555 2.72 LINK O PHE C 137 NA NA C 503 1555 1555 2.24 LINK O ASP C 364 NA NA C 503 1555 1555 2.24 LINK NA NA C 503 O HOH C 622 1555 1555 2.59 LINK NA NA C 503 O HOH C 634 1555 1555 2.42 LINK NA NA C 503 O HOH C 651 1555 1555 2.35 CRYST1 268.131 59.612 145.526 90.00 116.86 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003730 0.000000 0.001889 0.00000 SCALE2 0.000000 0.016775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007703 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.927976 -0.372636 -0.001996 407.15030 1 MTRIX2 2 -0.370640 0.923534 -0.098541 93.44453 1 MTRIX3 2 0.038563 -0.090704 -0.995131 309.97272 1 MTRIX1 3 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 3 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 3 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 4 -0.933340 -0.358727 -0.013857 411.27591 1 MTRIX2 4 -0.355353 0.928667 -0.106314 92.26268 1 MTRIX3 4 0.051007 -0.094303 -0.994236 307.06226 1