HEADER HYDROLASE/HYDROLASE INHIBITOR 03-AUG-18 6EAT TITLE CRYSTALLOGRAPHIC STRUCTURE OF THE CYCLIC NONAPEPTIDE DERIVED FROM THE TITLE 2 BTCI INHIBITOR BOUND TO BETA-TRYPSIN IN SPACE GROUP P 21 21 21. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATIONIC TRYPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-TRYPSIN; COMPND 5 EC: 3.4.21.4; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 9MER-PEPTIDE; COMPND 8 CHAIN: I; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: VIGNA UNGUICULATA; SOURCE 8 ORGANISM_TAXID: 3917 KEYWDS INHIBITOR COMPLEX, BTCI, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.C.FERNANDES,N.F.VALADARES,S.M.FREITAS,J.A.R.G.BARBOSA REVDAT 4 11-OCT-23 6EAT 1 REMARK REVDAT 3 08-JAN-20 6EAT 1 REMARK REVDAT 2 20-MAR-19 6EAT 1 JRNL REVDAT 1 13-MAR-19 6EAT 0 JRNL AUTH J.P.C.FERNANDES,A.MEHDAD,N.F.VALADARES,C.B.F.MOURAO, JRNL AUTH 2 M.M.VENTURA,J.A.R.G.BARBOSA,S.M.FREITAS JRNL TITL CRYSTALLOGRAPHIC STRUCTURE OF A COMPLEX BETWEEN TRYPSIN AND JRNL TITL 2 A NONAPEPTIDE DERIVED FROM A BOWMAN-BIRK INHIBITOR FOUND IN JRNL TITL 3 VIGNA UNGUICULATA SEEDS. JRNL REF ARCH. BIOCHEM. BIOPHYS. V. 665 79 2019 JRNL REFN ESSN 1096-0384 JRNL PMID 30817908 JRNL DOI 10.1016/J.ABB.2019.02.013 REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 83128 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.410 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9271 - 2.7693 1.00 6507 160 0.1339 0.1367 REMARK 3 2 2.7693 - 2.1983 1.00 6264 158 0.1319 0.1493 REMARK 3 3 2.1983 - 1.9205 1.00 6201 154 0.1282 0.1345 REMARK 3 4 1.9205 - 1.7449 1.00 6223 154 0.1325 0.1603 REMARK 3 5 1.7449 - 1.6199 1.00 6142 147 0.1364 0.1372 REMARK 3 6 1.6199 - 1.5244 1.00 6152 159 0.1366 0.1518 REMARK 3 7 1.5244 - 1.4480 1.00 6133 150 0.1410 0.1579 REMARK 3 8 1.4480 - 1.3850 0.99 6113 147 0.1448 0.1567 REMARK 3 9 1.3850 - 1.3317 0.98 6003 155 0.1553 0.1776 REMARK 3 10 1.3317 - 1.2857 0.93 5695 135 0.1622 0.1661 REMARK 3 11 1.2857 - 1.2455 0.90 5495 137 0.2309 0.2345 REMARK 3 12 1.2455 - 1.2099 0.85 5176 129 0.2193 0.2326 REMARK 3 13 1.2099 - 1.1781 0.83 5090 127 0.2727 0.2954 REMARK 3 14 1.1781 - 1.1493 0.64 3932 90 0.4606 0.4808 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.024 1876 REMARK 3 ANGLE : 1.453 2580 REMARK 3 CHIRALITY : 0.091 283 REMARK 3 PLANARITY : 0.008 323 REMARK 3 DIHEDRAL : 12.590 696 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0966 67.6534 148.2681 REMARK 3 T TENSOR REMARK 3 T11: 0.0938 T22: 0.0987 REMARK 3 T33: 0.1033 T12: -0.0003 REMARK 3 T13: 0.0069 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.7878 L22: 1.2539 REMARK 3 L33: 1.1376 L12: -0.2751 REMARK 3 L13: -0.3079 L23: 0.1531 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: -0.0380 S13: 0.0343 REMARK 3 S21: 0.0677 S22: 0.0361 S23: 0.0571 REMARK 3 S31: -0.0182 S32: 0.0039 S33: -0.0450 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0578 59.8883 144.7556 REMARK 3 T TENSOR REMARK 3 T11: 0.0407 T22: 0.0847 REMARK 3 T33: 0.0881 T12: -0.0297 REMARK 3 T13: -0.0094 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.4056 L22: 5.1809 REMARK 3 L33: 1.6435 L12: -1.6736 REMARK 3 L13: -0.3859 L23: 0.0072 REMARK 3 S TENSOR REMARK 3 S11: -0.0764 S12: -0.0049 S13: 0.0366 REMARK 3 S21: 0.0510 S22: 0.0498 S23: 0.0313 REMARK 3 S31: 0.1170 S32: -0.0508 S33: 0.0330 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8925 60.2557 136.2183 REMARK 3 T TENSOR REMARK 3 T11: 0.0922 T22: 0.0995 REMARK 3 T33: 0.0804 T12: 0.0149 REMARK 3 T13: 0.0122 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.8516 L22: 1.3866 REMARK 3 L33: 1.8434 L12: -0.1857 REMARK 3 L13: -0.8103 L23: 0.3203 REMARK 3 S TENSOR REMARK 3 S11: -0.0428 S12: 0.0001 S13: -0.0205 REMARK 3 S21: -0.0518 S22: 0.0346 S23: -0.0757 REMARK 3 S31: 0.1807 S32: 0.1556 S33: -0.0054 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4585 54.7520 138.5186 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.0535 REMARK 3 T33: 0.0737 T12: 0.0073 REMARK 3 T13: -0.0039 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 6.7533 L22: 1.0508 REMARK 3 L33: 2.0603 L12: 0.9678 REMARK 3 L13: -1.9150 L23: -0.4564 REMARK 3 S TENSOR REMARK 3 S11: -0.1739 S12: 0.0700 S13: -0.1240 REMARK 3 S21: -0.1179 S22: 0.1262 S23: 0.0177 REMARK 3 S31: 0.2884 S32: 0.0130 S33: 0.0489 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7367 56.3181 149.8307 REMARK 3 T TENSOR REMARK 3 T11: 0.1384 T22: 0.1883 REMARK 3 T33: 0.0964 T12: 0.0379 REMARK 3 T13: -0.0096 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 8.4548 L22: 6.1045 REMARK 3 L33: 5.8413 L12: -0.6728 REMARK 3 L13: 2.0470 L23: -4.0112 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: -0.3010 S13: -0.1406 REMARK 3 S21: 0.2276 S22: -0.2477 S23: -0.3170 REMARK 3 S31: 0.2578 S32: 0.7713 S33: 0.2186 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000235777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.20011 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83153 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.149 REMARK 200 RESOLUTION RANGE LOW (A) : 29.917 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RU4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES SODIUM 1 M MONOHYDRATE REMARK 280 LITHIUM SULFATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.91700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.51500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.78450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.51500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.91700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.78450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -162.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 98 O2 SO4 A 307 1.51 REMARK 500 HG1 THR A 134 O2 SO4 A 308 1.53 REMARK 500 O LYS A 159 HH TYR A 184A 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 220 CB CYS A 220 SG -0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 189 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 71 -78.77 -123.88 REMARK 500 ASN A 79 -13.08 83.52 REMARK 500 SER A 214 -67.42 -126.11 REMARK 500 LYS I 3 39.27 -99.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 ASN A 72 O 91.1 REMARK 620 3 VAL A 75 O 163.6 81.7 REMARK 620 4 GLU A 80 OE2 103.1 156.7 88.7 REMARK 620 5 HOH A 427 O 84.3 84.2 109.4 79.0 REMARK 620 6 HOH A 521 O 80.3 104.5 87.2 96.1 162.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 313 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RU4 RELATED DB: PDB REMARK 900 RELATED ID: 2G81 RELATED DB: PDB REMARK 900 RELATED ID: 6EAU RELATED DB: PDB REMARK 900 RELATED ID: 6EAV RELATED DB: PDB REMARK 900 RELATED ID: 6EAW RELATED DB: PDB REMARK 900 RELATED ID: 6EAX RELATED DB: PDB REMARK 900 RELATED ID: 6E5M RELATED DB: PDB DBREF 6EAT A 16 245 UNP P00760 TRY1_BOVIN 24 246 DBREF 6EAT I 1 9 PDB 6EAT 6EAT 1 9 SEQRES 1 A 223 ILE VAL GLY GLY TYR THR CYS GLY ALA ASN THR VAL PRO SEQRES 2 A 223 TYR GLN VAL SER LEU ASN SER GLY TYR HIS PHE CYS GLY SEQRES 3 A 223 GLY SER LEU ILE ASN SER GLN TRP VAL VAL SER ALA ALA SEQRES 4 A 223 HIS CYS TYR LYS SER GLY ILE GLN VAL ARG LEU GLY GLU SEQRES 5 A 223 ASP ASN ILE ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SEQRES 6 A 223 SER ALA SER LYS SER ILE VAL HIS PRO SER TYR ASN SER SEQRES 7 A 223 ASN THR LEU ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SEQRES 8 A 223 SER ALA ALA SER LEU ASN SER ARG VAL ALA SER ILE SER SEQRES 9 A 223 LEU PRO THR SER CYS ALA SER ALA GLY THR GLN CYS LEU SEQRES 10 A 223 ILE SER GLY TRP GLY ASN THR LYS SER SER GLY THR SER SEQRES 11 A 223 TYR PRO ASP VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SEQRES 12 A 223 SER ASP SER SER CYS LYS SER ALA TYR PRO GLY GLN ILE SEQRES 13 A 223 THR SER ASN MET PHE CYS ALA GLY TYR LEU GLU GLY GLY SEQRES 14 A 223 LYS ASP SER CYS GLN GLY ASP SER GLY GLY PRO VAL VAL SEQRES 15 A 223 CYS SER GLY LYS LEU GLN GLY ILE VAL SER TRP GLY SER SEQRES 16 A 223 GLY CYS ALA GLN LYS ASN LYS PRO GLY VAL TYR THR LYS SEQRES 17 A 223 VAL CYS ASN TYR VAL SER TRP ILE LYS GLN THR ILE ALA SEQRES 18 A 223 SER ASN SEQRES 1 I 9 CYS THR LYS SER ILE PRO PRO GLN CYS HET CA A 301 1 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET SO4 A 309 5 HET SO4 A 310 5 HET SO4 A 311 5 HET SO4 A 312 5 HET SO4 A 313 5 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 3 CA CA 2+ FORMUL 4 SO4 12(O4 S 2-) FORMUL 16 HOH *369(H2 O) HELIX 1 AA1 ALA A 55 TYR A 59 5 5 HELIX 2 AA2 SER A 164 TYR A 172 1 9 HELIX 3 AA3 TYR A 234 SER A 244 1 11 SHEET 1 AA1 7 TYR A 20 THR A 21 0 SHEET 2 AA1 7 LYS A 156 PRO A 161 -1 O CYS A 157 N TYR A 20 SHEET 3 AA1 7 GLN A 135 GLY A 140 -1 N ILE A 138 O LEU A 158 SHEET 4 AA1 7 PRO A 198 CYS A 201 -1 O VAL A 200 N LEU A 137 SHEET 5 AA1 7 LYS A 204 TRP A 215 -1 O LYS A 204 N CYS A 201 SHEET 6 AA1 7 GLY A 226 LYS A 230 -1 O VAL A 227 N TRP A 215 SHEET 7 AA1 7 MET A 180 ALA A 183 -1 N PHE A 181 O TYR A 228 SHEET 1 AA2 7 GLN A 30 ASN A 34 0 SHEET 2 AA2 7 HIS A 40 ASN A 48 -1 O CYS A 42 N LEU A 33 SHEET 3 AA2 7 TRP A 51 SER A 54 -1 O VAL A 53 N SER A 45 SHEET 4 AA2 7 MET A 104 LEU A 108 -1 O ILE A 106 N VAL A 52 SHEET 5 AA2 7 GLN A 81 VAL A 90 -1 N ILE A 89 O LEU A 105 SHEET 6 AA2 7 GLN A 64 LEU A 67 -1 N LEU A 67 O GLN A 81 SHEET 7 AA2 7 GLN A 30 ASN A 34 -1 N SER A 32 O ARG A 66 SSBOND 1 CYS A 22 CYS A 157 1555 1555 1.98 SSBOND 2 CYS A 42 CYS A 58 1555 1555 1.99 SSBOND 3 CYS A 128 CYS A 232 1555 1555 1.99 SSBOND 4 CYS A 136 CYS A 201 1555 1555 1.98 SSBOND 5 CYS A 168 CYS A 182 1555 1555 2.03 SSBOND 6 CYS A 191 CYS A 220 1555 1555 2.04 SSBOND 7 CYS I 1 CYS I 9 1555 1555 2.02 LINK OE1 GLU A 70 CA CA A 301 1555 1555 2.20 LINK O ASN A 72 CA CA A 301 1555 1555 2.19 LINK O VAL A 75 CA CA A 301 1555 1555 2.18 LINK OE2 GLU A 80 CA CA A 301 1555 1555 2.23 LINK CA CA A 301 O HOH A 427 1555 1555 2.33 LINK CA CA A 301 O HOH A 521 1555 1555 2.27 CISPEP 1 ILE I 5 PRO I 6 0 -2.06 CISPEP 2 ILE I 5 PRO I 6 0 -2.93 SITE 1 AC1 6 GLU A 70 ASN A 72 VAL A 75 GLU A 80 SITE 2 AC1 6 HOH A 427 HOH A 521 SITE 1 AC2 6 SER A 164 ASP A 165 HOH A 405 HOH A 408 SITE 2 AC2 6 HOH A 430 HOH A 609 SITE 1 AC3 5 LYS A 169 PRO A 173 GLY A 174 HOH A 486 SITE 2 AC3 5 HOH A 551 SITE 1 AC4 7 PRO A 152 ASP A 153 VAL A 154 LYS A 156 SITE 2 AC4 7 HOH A 481 HOH A 544 HOH A 649 SITE 1 AC5 3 SER A 110 HOH A 545 HOH A 591 SITE 1 AC6 6 ILE A 47 ASN A 48 LEU A 123 ILE A 238 SITE 2 AC6 6 ILE A 242 HOH A 629 SITE 1 AC7 6 ASN A 95 THR A 98 ASN A 100 HOH A 456 SITE 2 AC7 6 HOH A 495 HOH A 527 SITE 1 AC8 9 CYS A 128 ALA A 129 SER A 130 THR A 134 SITE 2 AC8 9 SER A 202 HOH A 409 HOH A 413 HOH A 421 SITE 3 AC8 9 HOH A 437 SITE 1 AC9 4 LYS A 145 SER A 146 SER A 147 HOH A 647 SITE 1 AD1 6 THR A 144 LYS A 156 HOH A 407 HOH A 439 SITE 2 AD1 6 HOH A 449 HOH A 511 SITE 1 AD2 6 SER A 217 GLY A 219 HOH A 410 HOH A 411 SITE 2 AD2 6 CYS I 1 HOH I 107 SITE 1 AD3 9 ARG A 66 PHE A 82 SER A 166 SER A 167 SITE 2 AD3 9 SER A 170 HOH A 402 HOH A 489 HOH A 493 SITE 3 AD3 9 HOH A 642 SITE 1 AD4 6 CYS A 232 ASN A 233 TYR A 234 VAL A 235 SITE 2 AD4 6 SER A 236 HOH A 589 CRYST1 59.834 61.569 67.030 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016713 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016242 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014919 0.00000