HEADER HYDROLASE 08-AUG-18 6ED2 TITLE FAECALIBACTERIUM PRAUSNITZII BETA-GLUCURONIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL HYDROLASE FAMILY 2, TIM BARREL DOMAIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FAECALIBACTERIUM PRAUSNITZII A2-165; SOURCE 3 ORGANISM_TAXID: 411483; SOURCE 4 GENE: FAEPRAA2165_01145; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYL HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.PELLOCK,K.A.BIERNAT,M.R.REDINBO REVDAT 3 13-MAR-24 6ED2 1 REMARK REVDAT 2 04-DEC-19 6ED2 1 REMARK REVDAT 1 13-FEB-19 6ED2 0 JRNL AUTH K.A.BIERNAT,S.J.PELLOCK,A.P.BHATT,M.M.BIVINS,W.G.WALTON, JRNL AUTH 2 B.N.T.TRAN,L.WEI,M.C.SNIDER,A.P.CESMAT,A.TRIPATHY,D.A.ERIE, JRNL AUTH 3 M.R.REDINBO JRNL TITL STRUCTURE, FUNCTION, AND INHIBITION OF DRUG REACTIVATING JRNL TITL 2 HUMAN GUT MICROBIAL BETA-GLUCURONIDASES. JRNL REF SCI REP V. 9 825 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30696850 JRNL DOI 10.1038/S41598-018-36069-W REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 65044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1637 - 5.5317 1.00 4866 154 0.1763 0.1836 REMARK 3 2 5.5317 - 4.3956 1.00 4609 147 0.1357 0.1579 REMARK 3 3 4.3956 - 3.8413 1.00 4556 144 0.1424 0.1862 REMARK 3 4 3.8413 - 3.4907 1.00 4502 142 0.1609 0.1919 REMARK 3 5 3.4907 - 3.2409 1.00 4494 143 0.1710 0.1980 REMARK 3 6 3.2409 - 3.0500 1.00 4487 142 0.1790 0.2197 REMARK 3 7 3.0500 - 2.8974 1.00 4467 141 0.1899 0.1841 REMARK 3 8 2.8974 - 2.7714 1.00 4471 141 0.1929 0.2068 REMARK 3 9 2.7714 - 2.6648 1.00 4451 142 0.1884 0.1884 REMARK 3 10 2.6648 - 2.5729 1.00 4430 140 0.1912 0.2364 REMARK 3 11 2.5729 - 2.4925 1.00 4448 141 0.2003 0.2407 REMARK 3 12 2.4925 - 2.4213 1.00 4397 140 0.2048 0.2404 REMARK 3 13 2.4213 - 2.3576 1.00 4443 141 0.2210 0.2759 REMARK 3 14 2.3576 - 2.3001 1.00 4425 140 0.2308 0.2675 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4937 REMARK 3 ANGLE : 0.906 6700 REMARK 3 CHIRALITY : 0.054 706 REMARK 3 PLANARITY : 0.006 868 REMARK 3 DIHEDRAL : 7.577 3973 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ED2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67984 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 28.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE: HCL, PH 7 0.4 REMARK 280 M MAGNESIUM FORMATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.96567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 155.93133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.96567 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 155.93133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.96567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 155.93133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 77.96567 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 155.93133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 73100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -163.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 145.23200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 145.23200 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 849 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 870 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1057 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 VAL A -10 REMARK 465 ASP A -9 REMARK 465 LEU A -8 REMARK 465 GLY A -7 REMARK 465 THR A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 SER A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 365 REMARK 465 SER A 366 REMARK 465 THR A 367 REMARK 465 ALA A 368 REMARK 465 ASN A 369 REMARK 465 PHE A 370 REMARK 465 LEU A 371 REMARK 465 ALA A 372 REMARK 465 ALA A 373 REMARK 465 ASN A 374 REMARK 465 GLN A 375 REMARK 465 GLY A 376 REMARK 465 ASN A 377 REMARK 465 GLY A 378 REMARK 465 ARG A 379 REMARK 465 GLN A 380 REMARK 465 LYS A 610 REMARK 465 LYS A 611 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 169 O HOH A 801 2.03 REMARK 500 O1 FMT A 705 O HOH A 802 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1020 O HOH A 1113 10555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 250 13.86 57.07 REMARK 500 ALA A 251 58.21 -145.32 REMARK 500 ILE A 307 -53.89 74.34 REMARK 500 PRO A 359 40.81 -75.49 REMARK 500 TRP A 480 -81.34 -118.59 REMARK 500 TYR A 516 154.73 175.94 REMARK 500 TRP A 532 -8.44 96.14 REMARK 500 ARG A 586 40.89 74.43 REMARK 500 LYS A 607 65.27 79.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 299 GLY A 300 144.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 703 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 219 OG1 REMARK 620 2 GLU A 221 OE1 112.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 707 DBREF 6ED2 A 4 611 UNP C7H4D2 C7H4D2_9FIRM 1 608 SEQADV 6ED2 HIS A -19 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 HIS A -18 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 HIS A -17 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 HIS A -16 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 HIS A -15 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 HIS A -14 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 SER A -13 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 SER A -12 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 GLY A -11 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 VAL A -10 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 ASP A -9 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 LEU A -8 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 GLY A -7 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 THR A -6 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 GLU A -5 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 ASN A -4 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 LEU A -3 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 TYR A -2 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 PHE A -1 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 GLN A 0 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 SER A 1 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 ASN A 2 UNP C7H4D2 EXPRESSION TAG SEQADV 6ED2 ALA A 3 UNP C7H4D2 EXPRESSION TAG SEQRES 1 A 631 HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU GLY SEQRES 2 A 631 THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASN ARG SEQRES 3 A 631 SER LEU LEU TYR PRO ARG ALA THR THR THR ARG ARG LEU SEQRES 4 A 631 ILE GLY LEU ASP GLY MET TRP ARG PHE SER PHE ASP PRO SEQRES 5 A 631 GLU SER LYS GLY VAL GLU ALA GLY TRP ALA LEU ASP LEU SEQRES 6 A 631 PRO SER SER LEU SER MET PRO VAL PRO ALA SER PHE CYS SEQRES 7 A 631 ASP LEU PHE THR ASP LYS ALA SER ARG GLU TYR CYS GLY SEQRES 8 A 631 ASP PHE TRP TYR GLU THR SER PHE PHE VAL PRO ALA GLU SEQRES 9 A 631 TRP SER GLY TRP ASP ILE VAL LEU ARG PHE GLY SER VAL SEQRES 10 A 631 THR HIS ARG ALA ARG VAL PHE VAL ASN GLY VAL GLU VAL SEQRES 11 A 631 ALA GLN HIS GLU GLY GLY PHE LEU PRO PHE ASP ALA THR SEQRES 12 A 631 VAL THR ASN ILE VAL ARG TYR ASN GLN PHE ASN LYS LEU SEQRES 13 A 631 SER VAL LEU ALA ASN ASN GLU LEU SER GLU THR MET LEU SEQRES 14 A 631 PRO ALA GLY THR THR CYS THR LEU ALA ASP GLY ARG LYS SEQRES 15 A 631 ILE ALA ALA PRO TYR PHE ASP PHE TYR ASN TYR ALA GLY SEQRES 16 A 631 ILE HIS ARG PRO VAL TRP LEU MET ALA LEU PRO LYS GLU SEQRES 17 A 631 ARG VAL LEU ASP TYR SER THR ARG TYR ARG LEU THR GLU SEQRES 18 A 631 THR GLY ALA GLU ILE ASP TYR THR VAL SER THR ASN GLY SEQRES 19 A 631 PRO HIS PRO VAL THR VAL GLU LEU TYR ASP GLY THR THR SEQRES 20 A 631 ARG VAL ALA GLU SER SER GLY THR THR GLY THR LEU VAL SEQRES 21 A 631 VAL LYS ASN ALA ARG LEU TRP ASN VAL HIS ALA ALA TYR SEQRES 22 A 631 LEU TYR ASP LEU VAL ILE ARG ILE HIS GLU GLY SER ALA SEQRES 23 A 631 VAL VAL ASP GLU TYR LEU ASP ARG ILE GLY ILE ARG THR SEQRES 24 A 631 PHE GLU ILE ARG HIS GLY ARG PHE LEU LEU ASN GLY SER SEQRES 25 A 631 PRO VAL TYR LEU ARG GLY PHE GLY ARG HIS GLU ASP ALA SEQRES 26 A 631 ASP ILE ARG GLY ARG GLY LEU ASP LEU PRO THR VAL LYS SEQRES 27 A 631 ARG ASP PHE GLU LEU MET LYS TRP ILE GLY ALA ASN CYS SEQRES 28 A 631 PHE ARG THR SER HIS TYR PRO TYR ALA GLU GLU ILE TYR SEQRES 29 A 631 GLN MET ALA ASP GLU GLU GLY PHE LEU ILE ILE ASP GLU SEQRES 30 A 631 VAL PRO ALA VAL GLY PHE MET GLN SER THR ALA ASN PHE SEQRES 31 A 631 LEU ALA ALA ASN GLN GLY ASN GLY ARG GLN GLN GLY PHE SEQRES 32 A 631 PHE GLU LYS GLU THR THR PRO ALA LEU LEU LYS ASN HIS SEQRES 33 A 631 LYS ALA ALA LEU THR ASP MET ILE ASP ARG ASP LYS ASN SEQRES 34 A 631 HIS PRO SER VAL ILE ALA TRP SER LEU LEU ASN GLU PRO SEQRES 35 A 631 GLN CYS THR SER ALA GLY THR GLU GLU TYR PHE LYS PRO SEQRES 36 A 631 LEU PHE GLU LEU ALA ARG ARG LEU ASP PRO GLN LYS ARG SEQRES 37 A 631 PRO ARG THR TYR THR VAL LEU MET THR SER LEU PRO ASP SEQRES 38 A 631 THR SER LYS GLY GLN ARG PHE ALA ASP PHE VAL SER LEU SEQRES 39 A 631 ASN ARG TYR TYR GLY TRP TYR VAL LEU GLY GLY ALA GLY SEQRES 40 A 631 LEU ALA ASP ALA GLU ALA ALA PHE HIS HIS GLU MET ASP SEQRES 41 A 631 GLY TRP ALA LYS VAL LEU HIS GLY ARG PRO LEU ILE PHE SEQRES 42 A 631 THR GLU TYR GLY THR ASP ASN LEU SER GLY ALA HIS LYS SEQRES 43 A 631 LEU PRO SER VAL MET TRP SER ALA GLU TYR GLN ASN GLU SEQRES 44 A 631 TYR LEU GLU MET THR HIS ALA VAL PHE ASP HIS TYR ASP SEQRES 45 A 631 PHE VAL GLN GLY GLU LEU VAL TRP ASN PHE ALA ASP PHE SEQRES 46 A 631 GLN THR THR GLU GLY ILE LEU ARG VAL ASP GLY ASN LYS SEQRES 47 A 631 LYS GLY ILE PHE THR ARG GLN ARG GLN PRO LYS ASP ALA SEQRES 48 A 631 ALA TYR LEU PHE ARG LYS ARG TRP THR THR LEU PRO VAL SEQRES 49 A 631 ASP PHE LYS LYS ARG LYS LYS HET GOL A 701 6 HET MG A 702 1 HET MG A 703 1 HET FMT A 704 3 HET FMT A 705 3 HET FMT A 706 3 HET FMT A 707 3 HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 MG 2(MG 2+) FORMUL 5 FMT 4(C H2 O2) FORMUL 9 HOH *356(H2 O) HELIX 1 AA1 LYS A 35 GLY A 40 1 6 HELIX 2 AA2 CYS A 58 PHE A 61 5 4 HELIX 3 AA3 ASP A 63 GLU A 68 1 6 HELIX 4 AA4 PRO A 82 SER A 86 5 5 HELIX 5 AA5 ASP A 313 GLY A 328 1 16 HELIX 6 AA6 ALA A 340 GLY A 351 1 12 HELIX 7 AA7 GLY A 382 LYS A 386 5 5 HELIX 8 AA8 THR A 388 LYS A 408 1 21 HELIX 9 AA9 GLY A 428 ASP A 444 1 17 HELIX 10 AB1 GLY A 465 ALA A 469 5 5 HELIX 11 AB2 GLY A 487 LEU A 506 1 20 HELIX 12 AB3 SER A 533 TYR A 551 1 19 HELIX 13 AB4 LYS A 589 LEU A 602 1 14 SHEET 1 AA1 4 ARG A 18 GLY A 21 0 SHEET 2 AA1 4 VAL A 180 LEU A 185 -1 O LEU A 182 N ILE A 20 SHEET 3 AA1 4 ASP A 89 PHE A 94 -1 N ASP A 89 O LEU A 185 SHEET 4 AA1 4 PHE A 120 THR A 123 -1 O ALA A 122 N LEU A 92 SHEET 1 AA2 6 LEU A 49 VAL A 53 0 SHEET 2 AA2 6 GLY A 24 ASP A 31 -1 N TRP A 26 O MET A 51 SHEET 3 AA2 6 ASP A 72 VAL A 81 -1 O TRP A 74 N SER A 29 SHEET 4 AA2 6 GLN A 132 ASN A 141 -1 O ALA A 140 N PHE A 73 SHEET 5 AA2 6 ARG A 100 VAL A 105 -1 N ARG A 102 O LEU A 139 SHEET 6 AA2 6 VAL A 108 GLU A 114 -1 O VAL A 110 N VAL A 103 SHEET 1 AA3 2 ALA A 55 SER A 56 0 SHEET 2 AA3 2 GLY A 175 ILE A 176 -1 O ILE A 176 N ALA A 55 SHEET 1 AA4 2 GLY A 152 THR A 156 0 SHEET 2 AA4 2 LYS A 162 PRO A 166 -1 O ALA A 165 N THR A 153 SHEET 1 AA5 3 VAL A 190 LEU A 199 0 SHEET 2 AA5 3 GLY A 203 THR A 212 -1 O SER A 211 N LEU A 191 SHEET 3 AA5 3 THR A 236 LYS A 242 -1 O LEU A 239 N ILE A 206 SHEET 1 AA6 4 THR A 227 SER A 233 0 SHEET 2 AA6 4 VAL A 218 ASP A 224 -1 N ASP A 224 O THR A 227 SHEET 3 AA6 4 TYR A 255 GLU A 263 -1 O ASP A 256 N TYR A 223 SHEET 4 AA6 4 ALA A 266 ILE A 275 -1 O ASP A 273 N LEU A 257 SHEET 1 AA7 3 PHE A 280 ARG A 283 0 SHEET 2 AA7 3 ARG A 286 LEU A 289 -1 O LEU A 288 N GLU A 281 SHEET 3 AA7 3 SER A 292 PRO A 293 -1 O SER A 292 N LEU A 289 SHEET 1 AA8 9 LEU A 296 GLY A 300 0 SHEET 2 AA8 9 CYS A 331 ARG A 333 1 O ARG A 333 N PHE A 299 SHEET 3 AA8 9 LEU A 353 GLU A 357 1 O LEU A 353 N PHE A 332 SHEET 4 AA8 9 VAL A 413 ASN A 420 1 O SER A 417 N ASP A 356 SHEET 5 AA8 9 ARG A 450 VAL A 454 1 O THR A 451 N LEU A 418 SHEET 6 AA8 9 VAL A 472 ASN A 475 1 O SER A 473 N VAL A 454 SHEET 7 AA8 9 LEU A 511 GLU A 515 1 O ILE A 512 N VAL A 472 SHEET 8 AA8 9 VAL A 554 TRP A 560 1 O GLN A 555 N LEU A 511 SHEET 9 AA8 9 LEU A 296 GLY A 300 1 N LEU A 296 O GLU A 557 LINK O BASP A 169 MG MG A 702 1555 1555 2.88 LINK OG1 THR A 219 MG MG A 703 1555 1555 2.75 LINK OE1 GLU A 221 MG MG A 703 1555 1555 2.81 CISPEP 1 VAL A 53 PRO A 54 0 2.36 CISPEP 2 THR A 98 HIS A 99 0 4.04 CISPEP 3 LEU A 149 PRO A 150 0 3.54 CISPEP 4 SER A 335 HIS A 336 0 -8.53 CISPEP 5 LEU A 527 PRO A 528 0 -0.55 CISPEP 6 TRP A 560 ASN A 561 0 0.92 SITE 1 AC1 6 ASP A 169 HIS A 336 ASN A 420 GLU A 421 SITE 2 AC1 6 GLU A 515 FMT A 706 SITE 1 AC2 7 ASP A 169 PHE A 170 HIS A 302 HIS A 336 SITE 2 AC2 7 TRP A 560 PHE A 565 HOH A 828 SITE 1 AC3 4 THR A 219 GLU A 221 VAL A 258 ARG A 260 SITE 1 AC4 1 ASN A 538 SITE 1 AC5 3 ARG A 196 ARG A 283 HOH A 802 SITE 1 AC6 9 ASP A 169 TYR A 477 TYR A 481 TRP A 560 SITE 2 AC6 9 ARG A 573 ASN A 577 LYS A 579 GOL A 701 SITE 3 AC6 9 HOH A 828 SITE 1 AC7 4 ARG A 301 ASP A 304 ASP A 320 HOH A 878 CRYST1 145.232 145.232 233.897 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006886 0.003975 0.000000 0.00000 SCALE2 0.000000 0.007951 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004275 0.00000