data_6ED9 # _entry.id 6ED9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ED9 pdb_00006ed9 10.2210/pdb6ed9/pdb WWPDB D_1000235468 ? ? BMRB 30506 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6DM7 unspecified PDB . 6DVT unspecified PDB . 6DXM unspecified BMRB ;NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA) ; 30506 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6ED9 _pdbx_database_status.recvd_initial_deposition_date 2018-08-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Davis, E.V.' 1 ? 'Hennig, M.' 2 ? 'Arya, D.P.' 3 0000-0001-5873-1066 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Davis, E.V.' 1 ? primary 'Hennig, M.' 2 ? primary 'Arya, D.P.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*A)-3') ; 2836.859 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*A)-3') ; 2636.739 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DG)(DG)(DG)(DC)(DG)(DG)(DG)(DA)' TGGGCGGGA A ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DC)(DG)(DC)(DC)(DC)(DA)' TCCCGCCCA B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DG n 1 9 DA n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DG n 2 6 DC n 2 7 DC n 2 8 DC n 2 9 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'Homo sapiens' Human 9606 ? 2 1 sample 1 9 'Homo sapiens' Human 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6ED9 6ED9 ? 1 ? 1 2 PDB 6ED9 6ED9 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6ED9 A 1 ? 9 ? 6ED9 1 ? 9 ? 1 9 2 2 6ED9 B 1 ? 9 ? 6ED9 10 ? 18 ? 10 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D DQF-COSY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 1 1 '2D 1H-13C HSQC' 1 isotropic 4 1 1 '2D 1H-1H NOESY' 1 isotropic 5 1 2 '2D 1H-1H NOESY' 2 isotropic 6 1 1 '2D ECOSY' 2 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '30 mM Na+' _pdbx_nmr_exptl_sample_conditions.details 'all nmr experiments' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label general _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '650 uM DNA, 25 mM sodium chloride, 5 mM Na Phosphate, 0.5 mM EDTA, 100% D2O' '100% D2O' non-exchange solution ;equal molar eq. d(TGGGCGGGA).d(TCCCGCCCA) 100% D2O 25 mM NaCl, 5.0 mM Na Phosphate, 0.5 mM EDTA pH 7.0 ; 2 '675 uM DNA, 25 mM sodium chloride, 5 mM Na Phosphate, 0.5 mM EDTA, 90% H2O/10% D2O' '90% H2O/10% D2O' exchange solution ;equal molar eq. d(TGGGCGGGA).d(TCCCGCCCA) 90% H2O/10% D2O 25 mM NaCl, 5.0 mM Na Phosphate, 0.5 mM EDTA pH 7.0 ; # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 800 ? 2 'AVANCE III' ? Bruker 850 ? # _pdbx_nmr_refine.entry_id 6ED9 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # _pdbx_nmr_ensemble.entry_id 6ED9 _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6ED9 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' CYANA 3.97 'Guntert, Mumenthaler and Wuthrich' 2 refinement Amber 14.0 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 3 'chemical shift assignment' Sparky ? Goddard 4 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 5 'data analysis' 3DNA ? Lu 6 collection TopSpin ? 'Bruker Biospin' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ED9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6ED9 _struct.title ;NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ED9 _struct_keywords.text 'Sp1 Consensus Sequence, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 1 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 1 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 2 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 2 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 2 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 7 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 7 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 7 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 8 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 8 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 8 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 9 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 1 O4 ? ? A DA 9 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6ED9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DA 9 9 9 DA DA A . n B 2 1 DT 1 10 10 DT DT B . n B 2 2 DC 2 11 11 DC DC B . n B 2 3 DC 3 12 12 DC DC B . n B 2 4 DC 4 13 13 DC DC B . n B 2 5 DG 5 14 14 DG DG B . n B 2 6 DC 6 15 15 DC DC B . n B 2 7 DC 7 16 16 DC DC B . n B 2 8 DC 8 17 17 DC DC B . n B 2 9 DA 9 18 18 DA DA B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 870 ? 1 MORE -7 ? 1 'SSA (A^2)' 3660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-14 2 'Structure model' 1 1 2019-12-18 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 2 'Structure model' pdbx_nmr_spectrometer 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 2 'Structure model' '_pdbx_nmr_spectrometer.model' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DNA 650 ? uM 'natural abundance' 1 'sodium chloride' 25 ? mM 'natural abundance' 1 'Na Phosphate' 5 ? mM 'natural abundance' 1 EDTA 0.5 ? mM 'natural abundance' 2 DNA 675 ? uM 'natural abundance' 2 'sodium chloride' 25 ? mM 'natural abundance' 2 'Na Phosphate' 5 ? mM 'natural abundance' 2 EDTA 0.5 ? mM 'natural abundance' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.22 108.30 1.92 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.64 108.30 3.34 0.30 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.03 108.30 3.73 0.30 N 4 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.21 108.30 1.91 0.30 N 5 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.04 108.30 2.74 0.30 N 6 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.77 118.90 3.87 0.60 N 7 1 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.36 121.90 -5.54 0.70 N 8 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.70 108.30 3.40 0.30 N 9 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.99 108.30 3.69 0.30 N 10 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.27 108.30 1.97 0.30 N 11 1 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.71 117.00 -3.29 0.50 N 12 1 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.35 117.70 3.65 0.50 N 13 1 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.63 118.60 -4.97 0.60 N 14 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.48 108.30 2.18 0.30 N 15 1 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.78 121.90 -5.12 0.70 N 16 1 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 110.84 108.30 2.54 0.30 N 17 1 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.55 118.90 3.65 0.60 N 18 1 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.36 121.90 -5.54 0.70 N 19 1 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 114.70 108.30 6.40 0.30 N 20 1 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.77 121.90 -5.13 0.70 N 21 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.63 108.30 2.33 0.30 N 22 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.26 108.30 1.96 0.30 N 23 1 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.04 121.90 -4.86 0.70 N 24 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.28 108.30 2.98 0.30 N 25 1 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.82 121.90 -5.08 0.70 N 26 1 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 110.79 108.30 2.49 0.30 N 27 1 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.87 121.90 -5.03 0.70 N 28 1 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.65 117.00 -3.35 0.50 N 29 1 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.38 117.70 3.68 0.50 N 30 1 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.67 118.60 -4.93 0.60 N 31 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.58 108.30 3.28 0.30 N 32 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.00 108.30 2.70 0.30 N 33 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.52 108.30 3.22 0.30 N 34 2 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.82 108.30 2.52 0.30 N 35 2 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.95 121.90 -4.95 0.70 N 36 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.34 108.30 3.04 0.30 N 37 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.38 108.30 3.08 0.30 N 38 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.03 108.30 2.73 0.30 N 39 2 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.23 108.30 2.93 0.30 N 40 2 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.65 117.00 -3.35 0.50 N 41 2 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.37 117.70 3.67 0.50 N 42 2 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.63 118.60 -4.97 0.60 N 43 2 C6 B DT 10 ? ? C5 B DT 10 ? ? C7 B DT 10 ? ? 119.28 122.90 -3.62 0.60 N 44 2 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 111.22 108.30 2.92 0.30 N 45 2 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.76 121.90 -5.14 0.70 N 46 2 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.76 108.30 3.46 0.30 N 47 2 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.93 121.90 -4.97 0.70 N 48 2 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.76 108.30 2.46 0.30 N 49 2 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.69 121.90 -5.21 0.70 N 50 2 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.80 108.30 3.50 0.30 N 51 2 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.75 108.30 2.45 0.30 N 52 2 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.00 121.90 -4.90 0.70 N 53 2 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.70 108.30 3.40 0.30 N 54 2 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.56 121.90 -5.34 0.70 N 55 2 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 112.15 108.30 3.85 0.30 N 56 2 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.93 121.90 -4.97 0.70 N 57 2 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.63 117.00 -3.37 0.50 N 58 2 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.41 117.70 3.71 0.50 N 59 2 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.65 118.60 -4.95 0.60 N 60 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.11 108.30 2.81 0.30 N 61 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.08 108.30 3.78 0.30 N 62 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.18 108.30 1.88 0.30 N 63 3 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.06 108.30 3.76 0.30 N 64 3 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.53 121.90 -5.37 0.70 N 65 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.85 108.30 2.55 0.30 N 66 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.22 108.30 1.92 0.30 N 67 3 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.59 117.00 -3.41 0.50 N 68 3 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.19 117.70 3.49 0.50 N 69 3 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.54 118.60 -5.06 0.60 N 70 3 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.90 121.90 -5.00 0.70 N 71 3 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.41 108.30 3.11 0.30 N 72 3 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.34 121.90 -5.56 0.70 N 73 3 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 111.93 108.30 3.63 0.30 N 74 3 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.76 121.90 -5.14 0.70 N 75 3 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 111.52 108.30 3.22 0.30 N 76 3 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 116.85 121.90 -5.05 0.70 N 77 3 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.03 108.30 2.73 0.30 N 78 3 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.95 121.90 -4.95 0.70 N 79 3 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 110.89 108.30 2.59 0.30 N 80 3 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.81 121.90 -5.09 0.70 N 81 3 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.69 117.00 -3.31 0.50 N 82 3 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.35 117.70 3.65 0.50 N 83 3 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.81 118.60 -4.79 0.60 N 84 4 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.16 108.30 2.86 0.30 N 85 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.80 108.30 3.50 0.30 N 86 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.15 108.30 1.85 0.30 N 87 4 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.63 108.30 3.33 0.30 N 88 4 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.50 121.90 -5.40 0.70 N 89 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.49 108.30 3.19 0.30 N 90 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.95 108.30 2.65 0.30 N 91 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.13 108.30 3.83 0.30 N 92 4 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.56 117.00 -3.44 0.50 N 93 4 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.41 117.70 3.71 0.50 N 94 4 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.60 118.60 -5.00 0.60 N 95 4 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.17 108.30 1.87 0.30 N 96 4 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.89 121.90 -5.01 0.70 N 97 4 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.48 108.30 3.18 0.30 N 98 4 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.54 118.90 3.64 0.60 N 99 4 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.45 121.90 -5.45 0.70 N 100 4 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 112.37 108.30 4.07 0.30 N 101 4 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.71 121.90 -5.19 0.70 N 102 4 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 111.46 108.30 3.16 0.30 N 103 4 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 116.91 121.90 -4.99 0.70 N 104 4 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.24 108.30 2.94 0.30 N 105 4 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.93 121.90 -4.97 0.70 N 106 4 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 110.22 108.30 1.92 0.30 N 107 4 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.75 121.90 -5.15 0.70 N 108 4 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.65 117.00 -3.35 0.50 N 109 4 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.19 117.70 3.49 0.50 N 110 4 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.49 118.60 -5.11 0.60 N 111 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.78 108.30 2.48 0.30 N 112 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.33 108.30 4.03 0.30 N 113 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.69 108.30 2.39 0.30 N 114 5 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.37 108.30 6.07 0.30 N 115 5 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 117.06 121.90 -4.84 0.70 N 116 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.51 108.30 4.21 0.30 N 117 5 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.73 117.00 -3.27 0.50 N 118 5 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.30 117.70 3.60 0.50 N 119 5 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.59 118.60 -5.01 0.60 N 120 5 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.91 108.30 2.61 0.30 N 121 5 N1 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 122.60 118.90 3.70 0.60 N 122 5 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.43 121.90 -5.47 0.70 N 123 5 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 113.77 108.30 5.47 0.30 N 124 5 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.82 121.90 -5.08 0.70 N 125 5 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.84 108.30 2.54 0.30 N 126 5 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.77 121.90 -5.13 0.70 N 127 5 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.84 108.30 2.54 0.30 N 128 5 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.23 108.30 1.93 0.30 N 129 5 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.00 121.90 -4.90 0.70 N 130 5 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.93 121.90 -4.97 0.70 N 131 5 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 112.54 108.30 4.24 0.30 N 132 5 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.84 121.90 -5.06 0.70 N 133 5 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 110.33 108.30 2.03 0.30 N 134 5 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.71 117.00 -3.29 0.50 N 135 5 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.40 117.70 3.70 0.50 N 136 5 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.74 118.60 -4.86 0.60 N 137 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.28 108.30 2.98 0.30 N 138 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.76 108.30 3.46 0.30 N 139 6 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.31 108.30 4.01 0.30 N 140 6 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.36 108.30 3.06 0.30 N 141 6 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.57 118.90 3.67 0.60 N 142 6 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.65 121.90 -5.25 0.70 N 143 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.93 108.30 2.63 0.30 N 144 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.35 108.30 2.05 0.30 N 145 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.96 108.30 3.66 0.30 N 146 6 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.66 117.00 -3.34 0.50 N 147 6 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.35 117.70 3.65 0.50 N 148 6 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.55 118.60 -5.05 0.60 N 149 6 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.22 108.30 1.92 0.30 N 150 6 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.93 121.90 -4.97 0.70 N 151 6 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.11 108.30 2.81 0.30 N 152 6 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.58 118.90 3.68 0.60 N 153 6 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.51 121.90 -5.39 0.70 N 154 6 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 111.56 108.30 3.26 0.30 N 155 6 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.88 121.90 -5.02 0.70 N 156 6 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 111.09 108.30 2.79 0.30 N 157 6 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.08 121.90 -4.82 0.70 N 158 6 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.15 108.30 2.85 0.30 N 159 6 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.95 121.90 -4.95 0.70 N 160 6 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 111.86 108.30 3.56 0.30 N 161 6 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.86 121.90 -5.04 0.70 N 162 6 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.60 117.00 -3.40 0.50 N 163 6 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.40 117.70 3.70 0.50 N 164 6 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.56 118.60 -5.04 0.60 N 165 7 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.29 122.90 -3.61 0.60 N 166 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.67 108.30 3.37 0.30 N 167 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.19 108.30 2.89 0.30 N 168 7 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.86 108.30 3.56 0.30 N 169 7 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.20 108.30 2.90 0.30 N 170 7 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 117.04 121.90 -4.86 0.70 N 171 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.20 108.30 1.90 0.30 N 172 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.28 108.30 2.98 0.30 N 173 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.44 108.30 3.14 0.30 N 174 7 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.65 117.00 -3.35 0.50 N 175 7 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.29 117.70 3.59 0.50 N 176 7 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.59 118.60 -5.01 0.60 N 177 7 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.53 108.30 2.23 0.30 N 178 7 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.88 121.90 -5.02 0.70 N 179 7 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 110.72 108.30 2.42 0.30 N 180 7 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.92 121.90 -4.98 0.70 N 181 7 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.93 108.30 2.63 0.30 N 182 7 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 122.51 118.90 3.61 0.60 N 183 7 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.35 121.90 -5.55 0.70 N 184 7 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.99 108.30 3.69 0.30 N 185 7 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 111.10 108.30 2.80 0.30 N 186 7 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.51 118.90 3.61 0.60 N 187 7 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 116.48 121.90 -5.42 0.70 N 188 7 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 112.82 108.30 4.52 0.30 N 189 7 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 117.05 121.90 -4.85 0.70 N 190 7 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 111.04 108.30 2.74 0.30 N 191 7 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.88 121.90 -5.02 0.70 N 192 7 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.75 117.00 -3.25 0.50 N 193 7 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.42 117.70 3.72 0.50 N 194 7 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.65 118.60 -4.95 0.60 N 195 8 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.58 108.30 6.28 0.30 N 196 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.34 108.30 4.04 0.30 N 197 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.33 108.30 3.03 0.30 N 198 8 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 113.04 108.30 4.74 0.30 N 199 8 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.43 108.30 2.13 0.30 N 200 8 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 117.18 121.90 -4.72 0.70 N 201 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.40 108.30 2.10 0.30 N 202 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.19 108.30 2.89 0.30 N 203 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.29 108.30 2.99 0.30 N 204 8 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.66 117.00 -3.34 0.50 N 205 8 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.27 117.70 3.57 0.50 N 206 8 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.60 118.60 -5.00 0.60 N 207 8 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.49 108.30 2.19 0.30 N 208 8 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.91 121.90 -4.99 0.70 N 209 8 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 110.99 108.30 2.69 0.30 N 210 8 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.96 121.90 -4.94 0.70 N 211 8 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.48 108.30 2.18 0.30 N 212 8 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 122.66 118.90 3.76 0.60 N 213 8 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.33 121.90 -5.57 0.70 N 214 8 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.03 108.30 3.73 0.30 N 215 8 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.97 108.30 2.67 0.30 N 216 8 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.01 121.90 -4.89 0.70 N 217 8 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.89 108.30 3.59 0.30 N 218 8 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.69 121.90 -5.21 0.70 N 219 8 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 111.88 108.30 3.58 0.30 N 220 8 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.77 121.90 -5.13 0.70 N 221 8 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.61 117.00 -3.39 0.50 N 222 8 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.14 117.70 3.44 0.50 N 223 8 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.32 118.60 -5.28 0.60 N 224 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.32 108.30 4.02 0.30 N 225 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.20 108.30 3.90 0.30 N 226 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.40 108.30 3.10 0.30 N 227 9 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.63 108.30 3.33 0.30 N 228 9 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.60 118.90 3.70 0.60 N 229 9 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.67 121.90 -5.23 0.70 N 230 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.03 108.30 3.73 0.30 N 231 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.37 108.30 3.07 0.30 N 232 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.64 108.30 3.34 0.30 N 233 9 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.63 117.00 -3.37 0.50 N 234 9 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.33 117.70 3.63 0.50 N 235 9 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.56 118.60 -5.04 0.60 N 236 9 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.74 108.30 2.44 0.30 N 237 9 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.95 121.90 -4.95 0.70 N 238 9 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.69 108.30 3.39 0.30 N 239 9 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.56 118.90 3.66 0.60 N 240 9 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.43 121.90 -5.47 0.70 N 241 9 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 114.33 108.30 6.03 0.30 N 242 9 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.80 121.90 -5.10 0.70 N 243 9 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.41 108.30 3.11 0.30 N 244 9 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.84 108.30 2.54 0.30 N 245 9 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 116.86 121.90 -5.04 0.70 N 246 9 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.77 108.30 3.47 0.30 N 247 9 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 117.22 121.90 -4.68 0.70 N 248 9 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.91 121.90 -4.99 0.70 N 249 9 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 111.19 108.30 2.89 0.30 N 250 9 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.56 117.00 -3.44 0.50 N 251 9 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.32 117.70 3.62 0.50 N 252 9 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.40 118.60 -5.20 0.60 N 253 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.12 108.30 2.82 0.30 N 254 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.15 108.30 3.85 0.30 N 255 10 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.50 108.30 3.20 0.30 N 256 10 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.63 108.30 2.33 0.30 N 257 10 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.55 118.90 3.65 0.60 N 258 10 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.62 121.90 -5.28 0.70 N 259 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.46 108.30 2.16 0.30 N 260 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.06 108.30 2.76 0.30 N 261 10 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.57 108.30 3.27 0.30 N 262 10 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.64 117.00 -3.36 0.50 N 263 10 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.17 117.70 3.47 0.50 N 264 10 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.31 118.60 -5.29 0.60 N 265 10 "O4'" B DT 10 ? ? "C1'" B DT 10 ? ? N1 B DT 10 ? ? 113.14 108.30 4.84 0.30 N 266 10 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 111.34 108.30 3.04 0.30 N 267 10 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 116.89 121.90 -5.01 0.70 N 268 10 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1 B DC 12 ? ? 111.65 108.30 3.35 0.30 N 269 10 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.57 118.90 3.67 0.60 N 270 10 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 116.34 121.90 -5.56 0.70 N 271 10 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 112.18 108.30 3.88 0.30 N 272 10 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 116.70 121.90 -5.20 0.70 N 273 10 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.46 108.30 2.16 0.30 N 274 10 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.19 121.90 -4.71 0.70 N 275 10 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.36 108.30 3.06 0.30 N 276 10 N3 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 116.95 121.90 -4.95 0.70 N 277 10 N3 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 116.78 121.90 -5.12 0.70 N 278 10 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 110.94 108.30 2.64 0.30 N 279 10 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.51 117.00 -3.49 0.50 N 280 10 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.50 117.70 3.80 0.50 N 281 10 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 113.46 118.60 -5.14 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 4 ? ? 0.059 'SIDE CHAIN' 2 1 DG A 6 ? ? 0.061 'SIDE CHAIN' 3 1 DG B 14 ? ? 0.099 'SIDE CHAIN' 4 3 DG A 4 ? ? 0.061 'SIDE CHAIN' 5 3 DG A 7 ? ? 0.072 'SIDE CHAIN' 6 3 DC B 11 ? ? 0.068 'SIDE CHAIN' 7 3 DC B 13 ? ? 0.063 'SIDE CHAIN' 8 3 DG B 14 ? ? 0.069 'SIDE CHAIN' 9 4 DG A 4 ? ? 0.066 'SIDE CHAIN' 10 4 DG A 7 ? ? 0.069 'SIDE CHAIN' 11 4 DG B 14 ? ? 0.070 'SIDE CHAIN' 12 5 DG A 7 ? ? 0.099 'SIDE CHAIN' 13 5 DC B 13 ? ? 0.092 'SIDE CHAIN' 14 6 DC A 5 ? ? 0.060 'SIDE CHAIN' 15 6 DG A 7 ? ? 0.067 'SIDE CHAIN' 16 6 DC B 13 ? ? 0.082 'SIDE CHAIN' 17 7 DG B 14 ? ? 0.053 'SIDE CHAIN' 18 9 DG A 4 ? ? 0.060 'SIDE CHAIN' 19 9 DG B 14 ? ? 0.091 'SIDE CHAIN' 20 10 DG A 7 ? ? 0.064 'SIDE CHAIN' 21 10 DC B 15 ? ? 0.066 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6ED9 'double helix' 6ED9 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 9 1_555 -0.193 -0.014 -0.469 -1.531 -13.813 -0.851 1 A_DT1:DA18_B A 1 ? B 18 ? 20 1 1 A DG 2 1_555 B DC 8 1_555 -0.406 -0.091 -0.097 -11.812 -14.293 0.309 2 A_DG2:DC17_B A 2 ? B 17 ? 19 1 1 A DG 3 1_555 B DC 7 1_555 -0.520 -0.138 0.066 -0.756 -10.445 -0.141 3 A_DG3:DC16_B A 3 ? B 16 ? 19 1 1 A DG 4 1_555 B DC 6 1_555 -0.557 -0.156 -0.087 -10.817 -12.493 0.461 4 A_DG4:DC15_B A 4 ? B 15 ? 19 1 1 A DC 5 1_555 B DG 5 1_555 0.438 -0.119 0.040 -1.288 -5.081 -1.704 5 A_DC5:DG14_B A 5 ? B 14 ? 19 1 1 A DG 6 1_555 B DC 4 1_555 -0.379 -0.094 0.018 -4.867 -12.992 0.778 6 A_DG6:DC13_B A 6 ? B 13 ? 19 1 1 A DG 7 1_555 B DC 3 1_555 -0.469 -0.127 0.037 2.840 -0.979 -0.150 7 A_DG7:DC12_B A 7 ? B 12 ? 19 1 1 A DG 8 1_555 B DC 2 1_555 -0.344 -0.100 0.036 2.492 -13.051 0.230 8 A_DG8:DC11_B A 8 ? B 11 ? 19 1 1 A DA 9 1_555 B DT 1 1_555 0.201 0.009 -0.150 9.444 -17.051 -0.971 9 A_DA9:DT10_B A 9 ? B 10 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 9 1_555 A DG 2 1_555 B DC 8 1_555 0.427 -1.053 3.637 -5.884 13.071 31.165 -3.938 -1.693 2.856 22.874 10.297 34.229 1 AA_DT1DG2:DC17DA18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A DG 2 1_555 B DC 8 1_555 A DG 3 1_555 B DC 7 1_555 0.127 -1.722 3.044 -1.946 6.391 28.491 -4.619 -0.620 2.590 12.764 3.886 29.248 2 AA_DG2DG3:DC16DC17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A DG 3 1_555 B DC 7 1_555 A DG 4 1_555 B DC 6 1_555 -0.332 -1.257 3.487 0.245 5.565 35.872 -2.826 0.569 3.259 8.968 -0.395 36.288 3 AA_DG3DG4:DC15DC16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A DG 4 1_555 B DC 6 1_555 A DC 5 1_555 B DG 5 1_555 0.277 -0.660 3.099 0.230 7.076 33.764 -2.133 -0.435 2.907 12.019 -0.390 34.477 4 AA_DG4DC5:DG14DC15_BB A 4 ? B 15 ? A 5 ? B 14 ? 1 A DC 5 1_555 B DG 5 1_555 A DG 6 1_555 B DC 4 1_555 0.882 -1.499 3.579 -0.494 0.120 24.381 -3.589 -2.257 3.554 0.283 1.169 24.386 5 AA_DC5DG6:DC13DG14_BB A 5 ? B 14 ? A 6 ? B 13 ? 1 A DG 6 1_555 B DC 4 1_555 A DG 7 1_555 B DC 3 1_555 -1.041 -1.279 3.090 -0.638 0.298 23.024 -3.301 2.394 3.100 0.746 1.598 23.035 6 AA_DG6DG7:DC12DC13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A DG 7 1_555 B DC 3 1_555 A DG 8 1_555 B DC 2 1_555 -1.273 0.220 3.305 -3.486 5.317 36.929 -0.378 1.510 3.405 8.318 5.454 37.453 7 AA_DG7DG8:DC11DC12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A DG 8 1_555 B DC 2 1_555 A DA 9 1_555 B DT 1 1_555 -0.087 -0.572 3.270 4.526 2.531 33.776 -1.371 0.858 3.182 4.324 -7.732 34.160 8 AA_DG8DA9:DT10DC11_BB A 8 ? B 11 ? A 9 ? B 10 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM097917 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'UV Thermal Denaturation, CD Spectroscopy' #