HEADER HYDROLASE 19-SEP-17 6EIC TITLE CRYSTAL STRUCTURE OF RV0183, A MONOGLYCERIDE LIPASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYCOBACTERIUM TUBERCULOSIS MONOGLYCERIDE LIPASE; COMPND 3 CHAIN: C, A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: RV0183; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONOGLYCERID LIPASE, HYDROLASE, LIPASE, ALPHA/BETA HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.ASCHAUER,T.PAVKOV-KELLER,M.OBERER REVDAT 2 29-SEP-21 6EIC 1 TITLE REVDAT 1 27-JUN-18 6EIC 0 JRNL AUTH P.ASCHAUER,R.ZIMMERMANN,R.BREINBAUER,T.PAVKOV-KELLER, JRNL AUTH 2 M.OBERER JRNL TITL THE CRYSTAL STRUCTURE OF MONOACYLGLYCEROL LIPASE FROM M. JRNL TITL 2 TUBERCULOSIS REVEALS THE BASIS FOR SPECIFIC INHIBITION. JRNL REF SCI REP V. 8 8948 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29895832 JRNL DOI 10.1038/S41598-018-27051-7 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 77233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3805 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.0291 - 4.8737 0.95 3824 208 0.2103 0.2284 REMARK 3 2 4.8737 - 3.8736 0.95 3716 201 0.1736 0.2111 REMARK 3 3 3.8736 - 3.3855 0.96 3706 170 0.1814 0.2077 REMARK 3 4 3.3855 - 3.0766 0.95 3673 201 0.1994 0.2156 REMARK 3 5 3.0766 - 2.8565 0.95 3674 191 0.2092 0.2454 REMARK 3 6 2.8565 - 2.6883 0.95 3667 201 0.2189 0.2631 REMARK 3 7 2.6883 - 2.5538 0.95 3657 205 0.2257 0.2463 REMARK 3 8 2.5538 - 2.4428 0.95 3643 179 0.2246 0.2507 REMARK 3 9 2.4428 - 2.3488 0.95 3682 206 0.2290 0.2663 REMARK 3 10 2.3488 - 2.2678 0.95 3640 188 0.2331 0.2710 REMARK 3 11 2.2678 - 2.1970 0.95 3620 209 0.2314 0.2731 REMARK 3 12 2.1970 - 2.1342 0.95 3664 212 0.2380 0.2586 REMARK 3 13 2.1342 - 2.0781 0.95 3649 189 0.2428 0.2795 REMARK 3 14 2.0781 - 2.0274 0.95 3634 179 0.2515 0.2924 REMARK 3 15 2.0274 - 1.9813 0.95 3634 210 0.2582 0.3188 REMARK 3 16 1.9813 - 1.9392 0.96 3659 166 0.2607 0.2809 REMARK 3 17 1.9392 - 1.9004 0.95 3640 190 0.2899 0.3138 REMARK 3 18 1.9004 - 1.8646 0.96 3642 168 0.3088 0.3397 REMARK 3 19 1.8646 - 1.8313 0.96 3646 169 0.3292 0.3381 REMARK 3 20 1.8313 - 1.8002 0.96 3689 163 0.3710 0.4373 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6478 REMARK 3 ANGLE : 1.010 8841 REMARK 3 CHIRALITY : 0.043 1020 REMARK 3 PLANARITY : 0.004 1161 REMARK 3 DIHEDRAL : 22.324 2356 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1200006622. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97895 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77304 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.209 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.85300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.03M SODIUM NITRATE, 0.03M DI-SODIUM REMARK 280 HYDROGENPHOSPHATE, 0.03M AMMONIUM SULFATE, 0.1M MOPS/HEPES, 12% REMARK 280 2-METHYL 2,4 PENTANDIOL, 12% PEG1000, 12% PEG3350. MICROSEEDING, REMARK 280 PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.66000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.32000 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 131.32000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.66000 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 517 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN C 140 REMARK 465 ASP C 141 REMARK 465 LEU C 142 REMARK 465 VAL C 143 REMARK 465 MET A 1 REMARK 465 ALA A 138 REMARK 465 ALA A 139 REMARK 465 GLN A 140 REMARK 465 ASP A 141 REMARK 465 LEU A 142 REMARK 465 LEU A 279 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 119 O HOH A 401 2.14 REMARK 500 O HOH B 500 O HOH B 523 2.18 REMARK 500 O HOH B 434 O HOH B 517 2.18 REMARK 500 OD1 ASP A 125 O HOH A 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE ARG B 236 NE ARG B 236 6555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP C 26 36.17 -78.20 REMARK 500 GLU C 41 -150.02 -96.43 REMARK 500 VAL C 76 34.09 39.46 REMARK 500 SER C 110 -121.55 58.72 REMARK 500 ALA C 134 65.40 37.36 REMARK 500 ALA C 138 73.07 -117.74 REMARK 500 VAL C 163 -64.61 -131.94 REMARK 500 TYR C 255 -158.68 -95.97 REMARK 500 GLU A 41 -150.10 -93.50 REMARK 500 SER A 110 -118.29 57.87 REMARK 500 ALA A 134 64.30 31.22 REMARK 500 VAL A 163 -66.89 -126.61 REMARK 500 ASP A 225 32.75 -88.63 REMARK 500 TYR A 255 -149.08 -91.12 REMARK 500 GLU B 41 -155.87 -100.51 REMARK 500 VAL B 76 37.71 36.12 REMARK 500 SER B 110 -119.14 56.75 REMARK 500 LEU B 142 54.38 -91.25 REMARK 500 VAL B 163 -69.06 -121.72 REMARK 500 TYR B 255 -156.23 -90.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 544 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH A 545 DISTANCE = 7.60 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 302 DBREF 6EIC C 1 279 UNP O07427 MGLL_MYCTU 1 279 DBREF 6EIC A 1 279 UNP O07427 MGLL_MYCTU 1 279 DBREF 6EIC B 1 279 UNP O07427 MGLL_MYCTU 1 279 SEQRES 1 C 279 MET THR THR THR ARG THR GLU ARG ASN PHE ALA GLY ILE SEQRES 2 C 279 GLY ASP VAL ARG ILE VAL TYR ASP VAL TRP THR PRO ASP SEQRES 3 C 279 THR ALA PRO GLN ALA VAL VAL VAL LEU ALA HIS GLY LEU SEQRES 4 C 279 GLY GLU HIS ALA ARG ARG TYR ASP HIS VAL ALA GLN ARG SEQRES 5 C 279 LEU GLY ALA ALA GLY LEU VAL THR TYR ALA LEU ASP HIS SEQRES 6 C 279 ARG GLY HIS GLY ARG SER GLY GLY LYS ARG VAL LEU VAL SEQRES 7 C 279 ARG ASP ILE SER GLU TYR THR ALA ASP PHE ASP THR LEU SEQRES 8 C 279 VAL GLY ILE ALA THR ARG GLU TYR PRO GLY CYS LYS ARG SEQRES 9 C 279 ILE VAL LEU GLY HIS SER MET GLY GLY GLY ILE VAL PHE SEQRES 10 C 279 ALA TYR GLY VAL GLU ARG PRO ASP ASN TYR ASP LEU MET SEQRES 11 C 279 VAL LEU SER ALA PRO ALA VAL ALA ALA GLN ASP LEU VAL SEQRES 12 C 279 SER PRO VAL VAL ALA VAL ALA ALA LYS LEU LEU GLY VAL SEQRES 13 C 279 VAL VAL PRO GLY LEU PRO VAL GLN GLU LEU ASP PHE THR SEQRES 14 C 279 ALA ILE SER ARG ASP PRO GLU VAL VAL GLN ALA TYR ASN SEQRES 15 C 279 THR ASP PRO LEU VAL HIS HIS GLY ARG VAL PRO ALA GLY SEQRES 16 C 279 ILE GLY ARG ALA LEU LEU GLN VAL GLY GLU THR MET PRO SEQRES 17 C 279 ARG ARG ALA PRO ALA LEU THR ALA PRO LEU LEU VAL LEU SEQRES 18 C 279 HIS GLY THR ASP ASP ARG LEU ILE PRO ILE GLU GLY SER SEQRES 19 C 279 ARG ARG LEU VAL GLU CYS VAL GLY SER ALA ASP VAL GLN SEQRES 20 C 279 LEU LYS GLU TYR PRO GLY LEU TYR HIS GLU VAL PHE ASN SEQRES 21 C 279 GLU PRO GLU ARG ASN GLN VAL LEU ASP ASP VAL VAL ALA SEQRES 22 C 279 TRP LEU THR GLU ARG LEU SEQRES 1 A 279 MET THR THR THR ARG THR GLU ARG ASN PHE ALA GLY ILE SEQRES 2 A 279 GLY ASP VAL ARG ILE VAL TYR ASP VAL TRP THR PRO ASP SEQRES 3 A 279 THR ALA PRO GLN ALA VAL VAL VAL LEU ALA HIS GLY LEU SEQRES 4 A 279 GLY GLU HIS ALA ARG ARG TYR ASP HIS VAL ALA GLN ARG SEQRES 5 A 279 LEU GLY ALA ALA GLY LEU VAL THR TYR ALA LEU ASP HIS SEQRES 6 A 279 ARG GLY HIS GLY ARG SER GLY GLY LYS ARG VAL LEU VAL SEQRES 7 A 279 ARG ASP ILE SER GLU TYR THR ALA ASP PHE ASP THR LEU SEQRES 8 A 279 VAL GLY ILE ALA THR ARG GLU TYR PRO GLY CYS LYS ARG SEQRES 9 A 279 ILE VAL LEU GLY HIS SER MET GLY GLY GLY ILE VAL PHE SEQRES 10 A 279 ALA TYR GLY VAL GLU ARG PRO ASP ASN TYR ASP LEU MET SEQRES 11 A 279 VAL LEU SER ALA PRO ALA VAL ALA ALA GLN ASP LEU VAL SEQRES 12 A 279 SER PRO VAL VAL ALA VAL ALA ALA LYS LEU LEU GLY VAL SEQRES 13 A 279 VAL VAL PRO GLY LEU PRO VAL GLN GLU LEU ASP PHE THR SEQRES 14 A 279 ALA ILE SER ARG ASP PRO GLU VAL VAL GLN ALA TYR ASN SEQRES 15 A 279 THR ASP PRO LEU VAL HIS HIS GLY ARG VAL PRO ALA GLY SEQRES 16 A 279 ILE GLY ARG ALA LEU LEU GLN VAL GLY GLU THR MET PRO SEQRES 17 A 279 ARG ARG ALA PRO ALA LEU THR ALA PRO LEU LEU VAL LEU SEQRES 18 A 279 HIS GLY THR ASP ASP ARG LEU ILE PRO ILE GLU GLY SER SEQRES 19 A 279 ARG ARG LEU VAL GLU CYS VAL GLY SER ALA ASP VAL GLN SEQRES 20 A 279 LEU LYS GLU TYR PRO GLY LEU TYR HIS GLU VAL PHE ASN SEQRES 21 A 279 GLU PRO GLU ARG ASN GLN VAL LEU ASP ASP VAL VAL ALA SEQRES 22 A 279 TRP LEU THR GLU ARG LEU SEQRES 1 B 279 MET THR THR THR ARG THR GLU ARG ASN PHE ALA GLY ILE SEQRES 2 B 279 GLY ASP VAL ARG ILE VAL TYR ASP VAL TRP THR PRO ASP SEQRES 3 B 279 THR ALA PRO GLN ALA VAL VAL VAL LEU ALA HIS GLY LEU SEQRES 4 B 279 GLY GLU HIS ALA ARG ARG TYR ASP HIS VAL ALA GLN ARG SEQRES 5 B 279 LEU GLY ALA ALA GLY LEU VAL THR TYR ALA LEU ASP HIS SEQRES 6 B 279 ARG GLY HIS GLY ARG SER GLY GLY LYS ARG VAL LEU VAL SEQRES 7 B 279 ARG ASP ILE SER GLU TYR THR ALA ASP PHE ASP THR LEU SEQRES 8 B 279 VAL GLY ILE ALA THR ARG GLU TYR PRO GLY CYS LYS ARG SEQRES 9 B 279 ILE VAL LEU GLY HIS SER MET GLY GLY GLY ILE VAL PHE SEQRES 10 B 279 ALA TYR GLY VAL GLU ARG PRO ASP ASN TYR ASP LEU MET SEQRES 11 B 279 VAL LEU SER ALA PRO ALA VAL ALA ALA GLN ASP LEU VAL SEQRES 12 B 279 SER PRO VAL VAL ALA VAL ALA ALA LYS LEU LEU GLY VAL SEQRES 13 B 279 VAL VAL PRO GLY LEU PRO VAL GLN GLU LEU ASP PHE THR SEQRES 14 B 279 ALA ILE SER ARG ASP PRO GLU VAL VAL GLN ALA TYR ASN SEQRES 15 B 279 THR ASP PRO LEU VAL HIS HIS GLY ARG VAL PRO ALA GLY SEQRES 16 B 279 ILE GLY ARG ALA LEU LEU GLN VAL GLY GLU THR MET PRO SEQRES 17 B 279 ARG ARG ALA PRO ALA LEU THR ALA PRO LEU LEU VAL LEU SEQRES 18 B 279 HIS GLY THR ASP ASP ARG LEU ILE PRO ILE GLU GLY SER SEQRES 19 B 279 ARG ARG LEU VAL GLU CYS VAL GLY SER ALA ASP VAL GLN SEQRES 20 B 279 LEU LYS GLU TYR PRO GLY LEU TYR HIS GLU VAL PHE ASN SEQRES 21 B 279 GLU PRO GLU ARG ASN GLN VAL LEU ASP ASP VAL VAL ALA SEQRES 22 B 279 TRP LEU THR GLU ARG LEU HET SO4 C 301 5 HET MPD C 302 8 HET MPD A 301 8 HET MPD B 301 8 HET NO3 B 302 4 HETNAM SO4 SULFATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM NO3 NITRATE ION FORMUL 4 SO4 O4 S 2- FORMUL 5 MPD 3(C6 H14 O2) FORMUL 8 NO3 N O3 1- FORMUL 9 HOH *459(H2 O) HELIX 1 AA1 ILE C 13 ASP C 15 5 3 HELIX 2 AA2 HIS C 42 ARG C 45 5 4 HELIX 3 AA3 TYR C 46 ALA C 56 1 11 HELIX 4 AA4 ASP C 80 TYR C 99 1 20 HELIX 5 AA5 SER C 110 ARG C 123 1 14 HELIX 6 AA6 PRO C 145 VAL C 158 1 14 HELIX 7 AA7 ASP C 167 ILE C 171 5 5 HELIX 8 AA8 ASP C 174 THR C 183 1 10 HELIX 9 AA9 ALA C 194 ALA C 211 1 18 HELIX 10 AB1 PRO C 212 LEU C 214 5 3 HELIX 11 AB2 PRO C 230 VAL C 241 1 12 HELIX 12 AB3 GLU C 263 GLU C 277 1 15 HELIX 13 AB4 ILE A 13 ASP A 15 5 3 HELIX 14 AB5 HIS A 42 ARG A 45 5 4 HELIX 15 AB6 TYR A 46 ALA A 56 1 11 HELIX 16 AB7 ASP A 80 TYR A 99 1 20 HELIX 17 AB8 SER A 110 ARG A 123 1 14 HELIX 18 AB9 SER A 144 VAL A 158 1 15 HELIX 19 AC1 ASP A 167 ILE A 171 5 5 HELIX 20 AC2 ASP A 174 THR A 183 1 10 HELIX 21 AC3 ALA A 194 GLU A 205 1 12 HELIX 22 AC4 ARG A 210 LEU A 214 5 5 HELIX 23 AC5 ILE A 231 VAL A 241 1 11 HELIX 24 AC6 GLU A 263 GLU A 277 1 15 HELIX 25 AC7 ILE B 13 ASP B 15 5 3 HELIX 26 AC8 HIS B 42 ARG B 45 5 4 HELIX 27 AC9 TYR B 46 ALA B 56 1 11 HELIX 28 AD1 ASP B 80 TYR B 99 1 20 HELIX 29 AD2 SER B 110 ARG B 123 1 14 HELIX 30 AD3 SER B 144 VAL B 158 1 15 HELIX 31 AD4 ASP B 167 SER B 172 5 6 HELIX 32 AD5 ASP B 174 ASP B 184 1 11 HELIX 33 AD6 ALA B 194 THR B 206 1 13 HELIX 34 AD7 THR B 206 ALA B 211 1 6 HELIX 35 AD8 PRO B 212 LEU B 214 5 3 HELIX 36 AD9 PRO B 230 VAL B 241 1 12 HELIX 37 AE1 GLU B 263 GLU B 277 1 15 SHEET 1 AA1 8 THR C 3 ALA C 11 0 SHEET 2 AA1 8 ARG C 17 PRO C 25 -1 O ILE C 18 N PHE C 10 SHEET 3 AA1 8 LEU C 58 LEU C 63 -1 O ALA C 62 N ASP C 21 SHEET 4 AA1 8 ALA C 31 ALA C 36 1 N VAL C 33 O TYR C 61 SHEET 5 AA1 8 LYS C 103 HIS C 109 1 O ILE C 105 N VAL C 34 SHEET 6 AA1 8 LEU C 129 SER C 133 1 O SER C 133 N GLY C 108 SHEET 7 AA1 8 LEU C 218 GLY C 223 1 O LEU C 221 N LEU C 132 SHEET 8 AA1 8 VAL C 246 TYR C 251 1 O LYS C 249 N VAL C 220 SHEET 1 AA2 2 PRO C 162 GLN C 164 0 SHEET 2 AA2 2 VAL C 192 PRO C 193 -1 O VAL C 192 N GLN C 164 SHEET 1 AA3 8 THR A 3 ALA A 11 0 SHEET 2 AA3 8 ARG A 17 PRO A 25 -1 O ILE A 18 N PHE A 10 SHEET 3 AA3 8 LEU A 58 LEU A 63 -1 O ALA A 62 N ASP A 21 SHEET 4 AA3 8 ALA A 31 ALA A 36 1 N VAL A 33 O TYR A 61 SHEET 5 AA3 8 LYS A 103 HIS A 109 1 O LEU A 107 N VAL A 34 SHEET 6 AA3 8 LEU A 129 SER A 133 1 O SER A 133 N GLY A 108 SHEET 7 AA3 8 LEU A 218 GLY A 223 1 O LEU A 219 N LEU A 132 SHEET 8 AA3 8 VAL A 246 TYR A 251 1 O LYS A 249 N VAL A 220 SHEET 1 AA4 2 PRO A 162 GLN A 164 0 SHEET 2 AA4 2 VAL A 192 PRO A 193 -1 O VAL A 192 N GLN A 164 SHEET 1 AA5 8 THR B 3 ALA B 11 0 SHEET 2 AA5 8 ARG B 17 PRO B 25 -1 O ILE B 18 N PHE B 10 SHEET 3 AA5 8 LEU B 58 LEU B 63 -1 O THR B 60 N TRP B 23 SHEET 4 AA5 8 ALA B 31 ALA B 36 1 N VAL B 33 O TYR B 61 SHEET 5 AA5 8 LYS B 103 HIS B 109 1 O LEU B 107 N VAL B 34 SHEET 6 AA5 8 LEU B 129 SER B 133 1 O SER B 133 N GLY B 108 SHEET 7 AA5 8 LEU B 218 GLY B 223 1 O LEU B 219 N LEU B 132 SHEET 8 AA5 8 VAL B 246 TYR B 251 1 O LYS B 249 N VAL B 220 SHEET 1 AA6 2 PRO B 162 GLN B 164 0 SHEET 2 AA6 2 VAL B 192 PRO B 193 -1 O VAL B 192 N GLN B 164 SITE 1 AC1 3 LEU C 39 LEU C 166 HOH C 422 SITE 1 AC2 6 LEU C 39 GLU C 41 HIS C 109 SER C 110 SITE 2 AC2 6 HIS C 256 GLU C 257 SITE 1 AC3 7 LEU A 39 HIS A 109 SER A 110 TYR A 181 SITE 2 AC3 7 LEU A 228 HIS A 256 GLU A 257 SITE 1 AC4 7 GLY B 38 LEU B 39 ARG B 45 HIS B 109 SITE 2 AC4 7 TYR B 181 HIS B 256 GLU B 257 SITE 1 AC5 3 LEU B 39 LEU B 200 HOH B 428 CRYST1 85.825 85.825 196.980 90.00 90.00 120.00 P 31 1 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011652 0.006727 0.000000 0.00000 SCALE2 0.000000 0.013454 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005077 0.00000