HEADER TRANSFERASE 05-OCT-17 6ENK TITLE THE X-RAY CRYSTAL STRUCTURE OF DESE BOUND TO DESFERRIOXAMINE B COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 GENE: SCO2780; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACETYLTRANSFERASE SIDEROPHORE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.H.NAISMITH,S.A.MCMAHON,G.L.CHALLIS,N.KADI,M.OKE,H.LIU,L.G.CARTER, AUTHOR 2 K.A.JOHNSON REVDAT 2 17-JAN-24 6ENK 1 LINK REVDAT 1 02-MAY-18 6ENK 0 JRNL AUTH J.L.RONAN,N.KADI,S.A.MCMAHON,J.H.NAISMITH,L.M.ALKHALAF, JRNL AUTH 2 G.L.CHALLIS JRNL TITL DESFERRIOXAMINE BIOSYNTHESIS: DIVERSE HYDROXAMATE ASSEMBLY JRNL TITL 2 BY SUBSTRATE-TOLERANT ACYL TRANSFERASE DESC. JRNL REF PHILOS. TRANS. R. SOC. V. 373 2018 JRNL REF 2 LOND., B, BIOL. SCI. JRNL REFN ESSN 1471-2970 JRNL PMID 29685972 JRNL DOI 10.1098/RSTB.2017.0068 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 20684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1123 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1462 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.1560 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2267 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 319 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.166 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.683 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2378 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2272 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3245 ; 1.499 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5294 ; 0.914 ; 2.962 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 6.045 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;29.214 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 397 ;12.729 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;21.571 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2633 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 439 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1197 ; 0.943 ; 1.781 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1196 ; 0.941 ; 1.781 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1496 ; 1.421 ; 2.665 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1497 ; 1.420 ; 2.665 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1181 ; 1.589 ; 1.991 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1182 ; 1.589 ; 1.993 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1747 ; 2.506 ; 2.894 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2745 ; 4.327 ;22.305 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2746 ; 4.329 ;22.311 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ENK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200006882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20684 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 30.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2X4L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.63M SODIUM MALONATE, 0.1M BISTRIS PH REMARK 280 6.0, 0.24M NACL., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.58150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.59700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.02750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.59700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.58150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.02750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 25 REMARK 465 ILE A 26 REMARK 465 ASP A 27 REMARK 465 PRO A 28 REMARK 465 PHE A 29 REMARK 465 TYR A 30 REMARK 465 MET A 31 REMARK 465 GLY A 32 REMARK 465 GLY A 33 REMARK 465 ASP A 34 REMARK 465 GLY A 35 REMARK 465 LYS A 36 REMARK 465 SER A 37 REMARK 465 ASP A 38 REMARK 465 GLY A 39 REMARK 465 ALA A 40 REMARK 465 GLY A 41 REMARK 465 ASP A 42 REMARK 465 GLY A 43 REMARK 465 SER A 44 REMARK 465 GLY A 45 REMARK 465 GLY A 46 REMARK 465 ALA A 47 REMARK 465 ALA A 48 REMARK 465 LYS A 49 REMARK 465 SER A 50 REMARK 465 GLY A 51 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 290 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 71 75.38 -105.98 REMARK 500 LEU A 125 104.80 -162.35 REMARK 500 SER A 151 -0.36 76.01 REMARK 500 LEU A 176 -37.09 -39.88 REMARK 500 LEU A 242 -30.08 88.02 REMARK 500 ASP A 290 126.86 -37.55 REMARK 500 GLN A 316 47.73 -109.15 REMARK 500 GLU A 323 78.01 -117.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 113 O REMARK 620 2 HOH A 582 O 169.6 REMARK 620 3 HOH A 634 O 85.0 96.2 REMARK 620 4 HOH A 653 O 93.8 96.6 86.7 REMARK 620 5 HOH A 658 O 80.4 89.2 97.3 172.6 REMARK 620 6 HOH A 733 O 95.3 83.6 179.4 92.8 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 343 O REMARK 620 2 ASN A 344 OD1 81.2 REMARK 620 3 HOH A 502 O 108.2 46.7 REMARK 620 4 HOH A 589 O 161.4 84.7 53.2 REMARK 620 5 HOH A 599 O 90.9 92.0 55.1 77.5 REMARK 620 6 HOH A 735 O 87.2 168.4 139.6 106.7 88.5 REMARK 620 7 HOH A 764 O 89.3 89.1 125.8 102.5 178.9 90.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 551 O REMARK 620 2 HOH A 582 O 109.6 REMARK 620 3 HOH A 658 O 163.3 77.4 REMARK 620 4 HOH A 733 O 92.8 77.9 73.5 REMARK 620 5 HOH A 748 O 88.0 158.9 82.7 90.0 REMARK 620 6 HOH A 803 O 84.3 87.4 111.6 163.2 106.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BJ5 A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X4L RELATED DB: PDB REMARK 900 2X4L IS THE APO VERSION OF THIS PROTEIN DBREF 6ENK A 33 349 UNP Q9L074 Q9L074_STRCO 33 349 SEQADV 6ENK GLY A 25 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK ILE A 26 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK ASP A 27 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK PRO A 28 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK PHE A 29 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK TYR A 30 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK MET A 31 UNP Q9L074 EXPRESSION TAG SEQADV 6ENK GLY A 32 UNP Q9L074 EXPRESSION TAG SEQRES 1 A 325 GLY ILE ASP PRO PHE TYR MET GLY GLY ASP GLY LYS SER SEQRES 2 A 325 ASP GLY ALA GLY ASP GLY SER GLY GLY ALA ALA LYS SER SEQRES 3 A 325 GLY PRO TRP SER PHE LYS ASP ASP ARG GLY THR THR VAL SEQRES 4 A 325 LYS LEU ASP LYS VAL PRO ALA ASN ILE VAL ALA PHE THR SEQRES 5 A 325 GLY VAL ALA ALA ALA LEU PHE ASP TYR GLY VAL GLU VAL SEQRES 6 A 325 LYS GLY VAL PHE GLY PRO THR THR THR LYS ASP GLY LYS SEQRES 7 A 325 PRO ASP VAL GLN ALA GLY ASP LEU ASP VAL ASP LYS VAL SEQRES 8 A 325 THR VAL LEU GLY ASN GLU TRP GLY LYS LEU ASN VAL GLU SEQRES 9 A 325 LYS TYR ALA SER LEU ALA PRO GLU VAL LEU ILE THR THR SEQRES 10 A 325 THR PHE ASP THR ALA GLY THR LEU TRP SER VAL PRO GLU SEQRES 11 A 325 GLU SER LYS ASP LYS VAL ALA LYS LEU ALA PRO SER VAL SEQRES 12 A 325 ALA ILE SER VAL PHE ASP ARG GLN LEU THR GLN PRO LEU SEQRES 13 A 325 GLN ARG MET TRP GLU LEU ALA GLU SER LEU GLY ALA ASP SEQRES 14 A 325 MET LYS ALA LYS LYS VAL THR ASP ALA LYS ALA ALA PHE SEQRES 15 A 325 ASP LYS ALA ALA ALA ARG LEU ARG ALA ALA ALA LYS ALA SEQRES 16 A 325 LYS PRO GLU ILE ARG VAL LEU ALA GLY SER ALA SER PRO SEQRES 17 A 325 ASP LEU PHE TYR VAL SER GLY THR ASN LEU SER VAL ASP SEQRES 18 A 325 LEU GLU TYR PHE LYS ALA LEU GLY VAL ASN PHE VAL GLU SEQRES 19 A 325 PRO SER GLU ASP ALA LYS LYS ALA THR GLY GLY TRP PHE SEQRES 20 A 325 GLU SER LEU SER TRP GLU ASN VAL ASP LYS TYR PRO ALA SEQRES 21 A 325 ASP VAL ILE ILE MET ASP ASP ARG ALA SER THR ILE GLN SEQRES 22 A 325 PRO ALA ASP ILE THR GLU GLY THR TRP LYS GLN LEU PRO SEQRES 23 A 325 ALA VAL LYS ALA GLY GLN VAL ILE ALA ARG SER PRO GLU SEQRES 24 A 325 PRO ILE LEU SER TYR ASP LYS CYS THR PRO LEU LEU ASP SEQRES 25 A 325 ASN LEU ALA GLU ALA ILE GLU ASN ALA LYS LYS VAL GLY HET NA A 401 1 HET NA A 402 1 HET NA A 403 1 HET BJ5 A 404 40 HETNAM NA SODIUM ION HETNAM BJ5 DESFERRIOXAMINE B FORMUL 2 NA 3(NA 1+) FORMUL 5 BJ5 C25 H45 FE N6 O8 FORMUL 6 HOH *319(H2 O) HELIX 1 AA1 THR A 76 ASP A 84 1 9 HELIX 2 AA2 ASP A 104 GLY A 108 5 5 HELIX 3 AA3 ASN A 126 LEU A 133 1 8 HELIX 4 AA4 SER A 156 ALA A 164 1 9 HELIX 5 AA5 LEU A 176 LEU A 190 1 15 HELIX 6 AA6 ALA A 196 LYS A 220 1 25 HELIX 7 AA7 SER A 243 LEU A 252 1 10 HELIX 8 AA8 SER A 260 LYS A 265 1 6 HELIX 9 AA9 ALA A 266 GLY A 268 5 3 HELIX 10 AB1 SER A 275 VAL A 279 5 5 HELIX 11 AB2 GLN A 297 ILE A 301 5 5 HELIX 12 AB3 GLU A 303 LEU A 309 1 7 HELIX 13 AB4 LEU A 309 ALA A 314 1 6 HELIX 14 AB5 SER A 327 ALA A 345 1 19 SHEET 1 AA1 2 TRP A 53 LYS A 56 0 SHEET 2 AA1 2 THR A 62 LEU A 65 -1 O LEU A 65 N TRP A 53 SHEET 1 AA2 5 THR A 116 GLY A 119 0 SHEET 2 AA2 5 GLY A 91 PHE A 93 1 N VAL A 92 O LEU A 118 SHEET 3 AA2 5 ILE A 72 PHE A 75 1 N ALA A 74 O GLY A 91 SHEET 4 AA2 5 VAL A 137 THR A 142 1 O VAL A 137 N VAL A 73 SHEET 5 AA2 5 SER A 166 SER A 170 1 O VAL A 167 N LEU A 138 SHEET 1 AA3 5 PHE A 271 LEU A 274 0 SHEET 2 AA3 5 PHE A 235 SER A 238 -1 N PHE A 235 O LEU A 274 SHEET 3 AA3 5 VAL A 225 ALA A 230 -1 N SER A 229 O TYR A 236 SHEET 4 AA3 5 VAL A 286 ASP A 290 1 O ILE A 288 N GLY A 228 SHEET 5 AA3 5 VAL A 317 ARG A 320 1 O ILE A 318 N MET A 289 LINK O ASP A 113 NA NA A 402 1555 1555 2.44 LINK O GLU A 343 NA NA A 401 1555 1555 2.66 LINK OD1 ASN A 344 NA NA A 401 1555 1555 2.91 LINK NA NA A 401 O HOH A 502 1555 1555 2.90 LINK NA NA A 401 O HOH A 589 1555 2455 2.34 LINK NA NA A 401 O HOH A 599 1555 2455 2.65 LINK NA NA A 401 O HOH A 735 1555 2455 2.34 LINK NA NA A 401 O HOH A 764 1555 1555 2.14 LINK NA NA A 402 O HOH A 582 1555 3444 2.36 LINK NA NA A 402 O HOH A 634 1555 3544 2.26 LINK NA NA A 402 O HOH A 653 1555 1555 2.49 LINK NA NA A 402 O HOH A 658 1555 1555 2.24 LINK NA NA A 402 O HOH A 733 1555 1555 2.36 LINK NA NA A 403 O HOH A 551 1555 1555 2.36 LINK NA NA A 403 O HOH A 582 1555 1555 2.53 LINK NA NA A 403 O HOH A 658 1555 3454 2.64 LINK NA NA A 403 O HOH A 733 1555 3454 2.47 LINK NA NA A 403 O HOH A 748 1555 3454 2.40 LINK NA NA A 403 O HOH A 803 1555 1555 2.30 SITE 1 AC1 8 PRO A 135 GLU A 343 ASN A 344 HOH A 502 SITE 2 AC1 8 HOH A 589 HOH A 599 HOH A 735 HOH A 764 SITE 1 AC2 7 ASP A 113 NA A 403 HOH A 582 HOH A 634 SITE 2 AC2 7 HOH A 653 HOH A 658 HOH A 733 SITE 1 AC3 7 NA A 402 HOH A 551 HOH A 582 HOH A 658 SITE 2 AC3 7 HOH A 733 HOH A 748 HOH A 803 SITE 1 AC4 21 TRP A 122 PHE A 143 TRP A 150 SER A 229 SITE 2 AC4 21 TYR A 236 SER A 238 SER A 243 TRP A 270 SITE 3 AC4 21 PHE A 271 ARG A 292 SER A 294 ARG A 320 SITE 4 AC4 21 PRO A 322 HOH A 505 HOH A 570 HOH A 592 SITE 5 AC4 21 HOH A 637 HOH A 659 HOH A 693 HOH A 715 SITE 6 AC4 21 HOH A 809 CRYST1 53.163 58.055 101.194 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018810 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009882 0.00000