HEADER SIGNALING PROTEIN 06-OCT-17 6ENT TITLE STRUCTURE OF THE RAT RKIP VARIANT DELTA143-146 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEBP-1,23 KDA MORPHINE-BINDING PROTEIN,HCNPPP,P23K, RAF COMPND 5 KINASE INHIBITORY PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: PEBP1, PBP, PEBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RKIP, PEBP, PBP, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.KOELMEL,M.HIRSCHBECK,H.SCHINDELIN,K.LORENZ,C.KISKER REVDAT 5 17-JAN-24 6ENT 1 REMARK REVDAT 4 31-JAN-18 6ENT 1 REMARK REVDAT 3 27-DEC-17 6ENT 1 JRNL REVDAT 2 20-DEC-17 6ENT 1 JRNL REVDAT 1 13-DEC-17 6ENT 0 JRNL AUTH J.J.SKINNER,S.WANG,J.LEE,C.ONG,R.SOMMESE,S.SIVARAMAKRISHNAN, JRNL AUTH 2 W.KOELMEL,M.HIRSCHBECK,H.SCHINDELIN,C.KISKER,K.LORENZ, JRNL AUTH 3 T.R.SOSNICK,M.R.ROSNER JRNL TITL CONSERVED SALT-BRIDGE COMPETITION TRIGGERED BY JRNL TITL 2 PHOSPHORYLATION REGULATES THE PROTEIN INTERACTOME. JRNL REF PROC. NATL. ACAD. SCI. V. 114 13453 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29208709 JRNL DOI 10.1073/PNAS.1711543114 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 6365 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 315 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 432 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 21 REMARK 3 BIN FREE R VALUE : 0.3920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1396 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 86.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.849 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.322 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.293 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.629 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1473 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1343 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2013 ; 1.322 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3117 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ; 7.032 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;32.834 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 230 ;16.376 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.142 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 209 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1677 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 342 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 716 ; 1.769 ; 5.640 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 715 ; 1.769 ; 5.635 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 896 ; 3.047 ; 8.437 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 897 ; 3.045 ; 8.443 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 757 ; 1.352 ; 5.792 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 758 ; 1.351 ; 5.796 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1116 ; 2.371 ; 8.645 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1586 ; 4.785 ;64.972 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1587 ; 4.783 ;65.019 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 4 REMARK 3 ORIGIN FOR THE GROUP (A): -34.9841 24.4381 31.8924 REMARK 3 T TENSOR REMARK 3 T11: 0.3216 T22: 0.3961 REMARK 3 T33: 0.4304 T12: -0.0606 REMARK 3 T13: 0.1439 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 1.4529 L22: 0.1832 REMARK 3 L33: 15.7633 L12: -0.4813 REMARK 3 L13: 4.7159 L23: -1.6626 REMARK 3 S TENSOR REMARK 3 S11: -0.1026 S12: -0.2399 S13: 0.1067 REMARK 3 S21: 0.1074 S22: 0.0548 S23: 0.0477 REMARK 3 S31: -0.6754 S32: -0.5898 S33: 0.0479 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): -32.3778 10.8429 28.6565 REMARK 3 T TENSOR REMARK 3 T11: 0.0622 T22: 0.0410 REMARK 3 T33: 0.1609 T12: -0.0475 REMARK 3 T13: -0.0900 T23: 0.0734 REMARK 3 L TENSOR REMARK 3 L11: 5.9262 L22: 6.3193 REMARK 3 L33: 3.9043 L12: -0.6344 REMARK 3 L13: 1.3189 L23: -2.6416 REMARK 3 S TENSOR REMARK 3 S11: 0.1746 S12: -0.1808 S13: 0.0047 REMARK 3 S21: -0.2753 S22: 0.0703 S23: 0.1127 REMARK 3 S31: 0.2875 S32: -0.2173 S33: -0.2449 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): -47.6711 -1.1352 26.5991 REMARK 3 T TENSOR REMARK 3 T11: 0.6689 T22: 0.6109 REMARK 3 T33: 0.9709 T12: -0.1086 REMARK 3 T13: -0.1495 T23: -0.0461 REMARK 3 L TENSOR REMARK 3 L11: 5.0029 L22: 9.2306 REMARK 3 L33: 1.5039 L12: 6.7385 REMARK 3 L13: -2.6656 L23: -3.7004 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: 0.2715 S13: 0.0669 REMARK 3 S21: 0.1231 S22: 0.2709 S23: 0.4430 REMARK 3 S31: -0.0325 S32: -0.1235 S33: -0.3151 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 84 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -26.0955 0.8879 26.7151 REMARK 3 T TENSOR REMARK 3 T11: 0.3266 T22: 0.0573 REMARK 3 T33: 0.4722 T12: 0.0638 REMARK 3 T13: 0.0034 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.1508 L22: 5.3862 REMARK 3 L33: 9.1022 L12: -2.2272 REMARK 3 L13: 1.5879 L23: -0.3503 REMARK 3 S TENSOR REMARK 3 S11: 0.3492 S12: 0.0655 S13: -0.1651 REMARK 3 S21: -0.5193 S22: -0.2756 S23: 0.3442 REMARK 3 S31: 0.8898 S32: -0.2778 S33: -0.0736 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): -34.7589 3.2714 23.7053 REMARK 3 T TENSOR REMARK 3 T11: 0.3956 T22: 0.1725 REMARK 3 T33: 0.3769 T12: -0.1332 REMARK 3 T13: -0.1052 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 7.7616 L22: 3.8735 REMARK 3 L33: 4.1032 L12: -2.9732 REMARK 3 L13: 1.7990 L23: -0.1667 REMARK 3 S TENSOR REMARK 3 S11: 0.2083 S12: 0.7912 S13: -0.8054 REMARK 3 S21: -0.6280 S22: -0.0975 S23: 0.2594 REMARK 3 S31: 0.8600 S32: -0.0145 S33: -0.1108 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): -28.7163 -6.4742 32.5434 REMARK 3 T TENSOR REMARK 3 T11: 0.3764 T22: 0.3067 REMARK 3 T33: 0.3598 T12: 0.0266 REMARK 3 T13: -0.0071 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 7.7763 L22: 0.8905 REMARK 3 L33: 0.4726 L12: 1.6572 REMARK 3 L13: 0.7693 L23: -0.2689 REMARK 3 S TENSOR REMARK 3 S11: -0.0926 S12: 0.3145 S13: -0.1745 REMARK 3 S21: -0.0189 S22: 0.1201 S23: 0.0209 REMARK 3 S31: 0.0646 S32: -0.0956 S33: -0.0274 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 147 A 167 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8511 1.5398 35.4442 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.0816 REMARK 3 T33: 0.2211 T12: 0.0087 REMARK 3 T13: -0.0355 T23: 0.1232 REMARK 3 L TENSOR REMARK 3 L11: 0.3474 L22: 6.7975 REMARK 3 L33: 5.4806 L12: 0.8136 REMARK 3 L13: 0.7513 L23: -2.3595 REMARK 3 S TENSOR REMARK 3 S11: 0.1735 S12: -0.0155 S13: -0.0587 REMARK 3 S21: 0.0908 S22: -0.0215 S23: 0.1993 REMARK 3 S31: 0.6923 S32: 0.1284 S33: -0.1520 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 168 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): -42.3817 5.3925 9.3971 REMARK 3 T TENSOR REMARK 3 T11: 0.5023 T22: 0.4920 REMARK 3 T33: 0.4806 T12: -0.1056 REMARK 3 T13: -0.0211 T23: -0.0547 REMARK 3 L TENSOR REMARK 3 L11: 0.1877 L22: 2.3041 REMARK 3 L33: 8.2550 L12: 0.0244 REMARK 3 L13: -0.1913 L23: 4.2770 REMARK 3 S TENSOR REMARK 3 S11: -0.1728 S12: 0.2400 S13: -0.1545 REMARK 3 S21: -0.1094 S22: 0.0512 S23: -0.0676 REMARK 3 S31: 0.0371 S32: -0.1512 S33: 0.1216 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ENT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200006917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 55.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 1.46500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6ENS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM FLUORIDE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 55.62500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 55.62500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 55.62500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 55.62500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 55.62500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 55.62500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 201 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 ILE A 137 REMARK 465 LEU A 138 REMARK 465 SER A 139 REMARK 465 ASN A 140 REMARK 465 LYS A 141 REMARK 465 HIS A 177 REMARK 465 ASP A 178 REMARK 465 GLN A 179 REMARK 465 LEU A 180 REMARK 465 ALA A 181 REMARK 465 GLY A 182 REMARK 465 LYS A 183 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A -1 99.53 64.23 REMARK 500 ALA A 9 32.51 -96.51 REMARK 500 VAL A 17 -66.14 -102.63 REMARK 500 GLU A 135 153.72 -43.03 REMARK 500 ASP A 171 -9.95 -58.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 1 NE2 REMARK 620 2 HIS A 1 NE2 0.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6ENS RELATED DB: PDB DBREF 6ENT A 2 183 UNP P31044 PEBP1_RAT 2 187 SEQADV 6ENT MET A -5 UNP P31044 INITIATING METHIONINE SEQADV 6ENT HIS A -4 UNP P31044 EXPRESSION TAG SEQADV 6ENT HIS A -3 UNP P31044 EXPRESSION TAG SEQADV 6ENT HIS A -2 UNP P31044 EXPRESSION TAG SEQADV 6ENT HIS A -1 UNP P31044 EXPRESSION TAG SEQADV 6ENT HIS A 0 UNP P31044 EXPRESSION TAG SEQADV 6ENT HIS A 1 UNP P31044 EXPRESSION TAG SEQADV 6ENT A UNP P31044 GLY 143 DELETION SEQADV 6ENT A UNP P31044 ASP 144 DELETION SEQADV 6ENT A UNP P31044 ASN 145 DELETION SEQADV 6ENT A UNP P31044 ARG 146 DELETION SEQRES 1 A 189 MET HIS HIS HIS HIS HIS HIS ALA ALA ASP ILE SER GLN SEQRES 2 A 189 TRP ALA GLY PRO LEU SER LEU GLN GLU VAL ASP GLU PRO SEQRES 3 A 189 PRO GLN HIS ALA LEU ARG VAL ASP TYR GLY GLY VAL THR SEQRES 4 A 189 VAL ASP GLU LEU GLY LYS VAL LEU THR PRO THR GLN VAL SEQRES 5 A 189 MET ASN ARG PRO SER SER ILE SER TRP ASP GLY LEU ASP SEQRES 6 A 189 PRO GLY LYS LEU TYR THR LEU VAL LEU THR ASP PRO ASP SEQRES 7 A 189 ALA PRO SER ARG LYS ASP PRO LYS PHE ARG GLU TRP HIS SEQRES 8 A 189 HIS PHE LEU VAL VAL ASN MET LYS GLY ASN ASP ILE SER SEQRES 9 A 189 SER GLY THR VAL LEU SER GLU TYR VAL GLY SER GLY PRO SEQRES 10 A 189 PRO LYS ASP THR GLY LEU HIS ARG TYR VAL TRP LEU VAL SEQRES 11 A 189 TYR GLU GLN GLU GLN PRO LEU ASN CYS ASP GLU PRO ILE SEQRES 12 A 189 LEU SER ASN LYS SER GLY LYS PHE LYS VAL GLU SER PHE SEQRES 13 A 189 ARG LYS LYS TYR HIS LEU GLY ALA PRO VAL ALA GLY THR SEQRES 14 A 189 CYS PHE GLN ALA GLU TRP ASP ASP SER VAL PRO LYS LEU SEQRES 15 A 189 HIS ASP GLN LEU ALA GLY LYS HET ZN A 201 1 HET CL A 202 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 ZN ZN 2+ FORMUL 3 CL CL 1- FORMUL 4 HOH *6(H2 O) HELIX 1 AA1 ASP A 4 TRP A 8 5 5 HELIX 2 AA2 SER A 13 VAL A 17 5 5 HELIX 3 AA3 THR A 42 MET A 47 5 6 HELIX 4 AA4 ASP A 96 GLY A 100 5 5 HELIX 5 AA5 LYS A 146 TYR A 154 1 9 SHEET 1 AA1 3 HIS A 23 ALA A 24 0 SHEET 2 AA1 3 ALA A 161 ALA A 167 1 O GLY A 162 N HIS A 23 SHEET 3 AA1 3 LYS A 39 VAL A 40 1 N LYS A 39 O GLN A 166 SHEET 1 AA2 6 HIS A 23 ALA A 24 0 SHEET 2 AA2 6 ALA A 161 ALA A 167 1 O GLY A 162 N HIS A 23 SHEET 3 AA2 6 HIS A 118 GLN A 127 -1 N TRP A 122 O THR A 163 SHEET 4 AA2 6 LEU A 63 ASP A 70 -1 N VAL A 67 O LEU A 123 SHEET 5 AA2 6 TRP A 84 LYS A 93 -1 O VAL A 89 N LEU A 66 SHEET 6 AA2 6 THR A 101 SER A 104 -1 O THR A 101 N VAL A 90 SHEET 1 AA3 3 VAL A 32 THR A 33 0 SHEET 2 AA3 3 ARG A 26 TYR A 29 -1 N TYR A 29 O VAL A 32 SHEET 3 AA3 3 SER A 52 SER A 54 -1 O SER A 52 N ASP A 28 LINK NE2 HIS A 1 ZN ZN A 201 1555 1555 2.55 LINK NE2 HIS A 1 ZN ZN A 201 1555 7555 2.55 CISPEP 1 ALA A 73 PRO A 74 0 -3.56 CISPEP 2 ARG A 82 GLU A 83 0 -4.89 SITE 1 AC1 2 HIS A 1 CL A 202 SITE 1 AC2 3 HIS A 0 HIS A 1 ZN A 201 CRYST1 111.250 111.250 111.250 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008989 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008989 0.00000