HEADER SIGNALING PROTEIN 08-OCT-17 6EO0 TITLE ZEBRAFISH SIRT5 IN COMPLEX WITH STALLED PEPTIDYLIMIDATE AND BICYCLIC TITLE 2 INTERMEDIATE OF INHIBITORY COMPOUND 29 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: REGULATORY PROTEIN SIR2 HOMOLOG 5; COMPND 5 EC: 3.5.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: SIRT5, SI:CH211-121A2.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, PTM, INHIBITOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.PANNEK,C.STEEGBORN REVDAT 3 17-JAN-24 6EO0 1 REMARK REVDAT 2 22-NOV-17 6EO0 1 JRNL REVDAT 1 01-NOV-17 6EO0 0 JRNL AUTH N.RAJABI,M.AUTH,K.R.TROELSEN,M.PANNEK,D.P.BHATT,M.FONTENAS, JRNL AUTH 2 M.D.HIRSCHEY,C.STEEGBORN,A.S.MADSEN,C.A.OLSEN JRNL TITL MECHANISM-BASED INHIBITORS OF THE HUMAN SIRTUIN 5 DEACYLASE: JRNL TITL 2 STRUCTURE-ACTIVITY RELATIONSHIP, BIOSTRUCTURAL, AND KINETIC JRNL TITL 3 INSIGHT. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 56 14836 2017 JRNL REFN ESSN 1521-3773 JRNL PMID 29044784 JRNL DOI 10.1002/ANIE.201709050 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 36530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1923 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2706 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.4060 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.4580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8541 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 420 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.83000 REMARK 3 B22 (A**2) : -1.63000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.44000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.378 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.485 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 43.823 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9281 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 8439 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12614 ; 1.967 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): 19611 ; 1.300 ; 3.016 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1104 ; 6.542 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 386 ;38.805 ;22.565 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1438 ;18.062 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 76 ;16.815 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1352 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10061 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1934 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4416 ; 2.032 ; 3.887 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4417 ; 2.032 ; 3.887 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5508 ; 3.328 ; 5.823 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5509 ; 3.328 ; 5.823 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4865 ; 1.983 ; 4.151 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4863 ; 1.983 ; 4.152 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 7102 ; 3.078 ; 6.154 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10054 ; 6.122 ;45.992 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 10042 ; 6.115 ;45.963 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 25 297 B 25 297 16504 0.10 0.05 REMARK 3 2 A 25 298 C 25 298 16524 0.10 0.05 REMARK 3 3 A 25 297 D 25 297 16566 0.09 0.05 REMARK 3 4 B 25 297 C 25 297 16442 0.09 0.05 REMARK 3 5 B 24 298 D 24 298 16538 0.11 0.05 REMARK 3 6 C 25 297 D 25 297 16612 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 298 REMARK 3 ORIGIN FOR THE GROUP (A): 48.1845 38.8677 40.8871 REMARK 3 T TENSOR REMARK 3 T11: 0.3140 T22: 0.0253 REMARK 3 T33: 0.1100 T12: -0.0073 REMARK 3 T13: 0.1838 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.0985 L22: 0.6951 REMARK 3 L33: 0.2737 L12: 0.1350 REMARK 3 L13: -0.0030 L23: -0.0707 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.0282 S13: 0.0079 REMARK 3 S21: -0.0229 S22: -0.0129 S23: 0.0035 REMARK 3 S31: 0.0087 S32: 0.0455 S33: 0.0201 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 24 B 298 REMARK 3 ORIGIN FOR THE GROUP (A): 40.0386 35.3641 74.7223 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.0169 REMARK 3 T33: 0.1249 T12: 0.0002 REMARK 3 T13: 0.1990 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.0645 L22: 0.2318 REMARK 3 L33: 0.2263 L12: -0.0786 REMARK 3 L13: 0.0305 L23: -0.0158 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: -0.0118 S13: -0.0220 REMARK 3 S21: 0.0066 S22: 0.0341 S23: 0.0409 REMARK 3 S31: -0.0255 S32: 0.0471 S33: -0.0392 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 25 C 298 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5845 38.3120 33.7975 REMARK 3 T TENSOR REMARK 3 T11: 0.3176 T22: 0.0127 REMARK 3 T33: 0.1076 T12: -0.0111 REMARK 3 T13: 0.1756 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.1280 L22: 0.7278 REMARK 3 L33: 0.3742 L12: -0.0296 REMARK 3 L13: -0.2141 L23: 0.0647 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: 0.0352 S13: 0.0385 REMARK 3 S21: 0.0290 S22: 0.0079 S23: 0.0075 REMARK 3 S31: -0.0344 S32: -0.0590 S33: -0.0526 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 24 D 298 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4132 36.4752 67.5814 REMARK 3 T TENSOR REMARK 3 T11: 0.3025 T22: 0.0013 REMARK 3 T33: 0.1360 T12: 0.0132 REMARK 3 T13: 0.2021 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.0338 L22: 0.7054 REMARK 3 L33: 0.4733 L12: -0.1373 REMARK 3 L13: 0.0290 L23: 0.1389 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.0005 S13: -0.0006 REMARK 3 S21: -0.0109 S22: -0.0114 S23: 0.0187 REMARK 3 S31: 0.0049 S32: -0.0178 S33: 0.0036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6EO0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200006927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 - 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918400 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38453 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4UTV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG8000, 0.2 M MGCL2, 0.1 M REMARK 280 TRIS/HCL PH 8.5, 0.1 M GLYCINE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.79500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 22 REMARK 465 ILE A 23 REMARK 465 ASP A 24 REMARK 465 GLY B 22 REMARK 465 ILE B 23 REMARK 465 GLY C 22 REMARK 465 ILE C 23 REMARK 465 ASP C 24 REMARK 465 GLY D 22 REMARK 465 ILE D 23 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 36 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 102 O HOH A 401 2.14 REMARK 500 O SER D 107 O HOH D 401 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 74 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 129 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 MET A 163 CG - SD - CE ANGL. DEV. = 11.1 DEGREES REMARK 500 ARG A 202 CG - CD - NE ANGL. DEV. = 24.9 DEGREES REMARK 500 ARG B 101 NE - CZ - NH1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG B 101 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 CYS B 120 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG B 161 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 161 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ALA B 253 N - CA - CB ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG C 161 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG D 74 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG D 101 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG D 161 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG D 161 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 30 50.05 -116.67 REMARK 500 ARG A 67 -60.59 -101.38 REMARK 500 ARG A 74 -129.19 43.89 REMARK 500 SER A 164 -64.28 -92.53 REMARK 500 ASN A 171 107.55 -161.31 REMARK 500 LYS A 183 -169.53 -111.39 REMARK 500 ARG A 194 51.23 38.73 REMARK 500 SER A 207 -0.92 82.03 REMARK 500 ASN A 209 46.10 27.19 REMARK 500 GLN A 279 -39.02 -34.92 REMARK 500 PHE B 26 134.97 85.11 REMARK 500 ARG B 67 -60.76 -100.20 REMARK 500 ARG B 74 -129.45 44.86 REMARK 500 SER B 164 -64.15 -92.72 REMARK 500 ASN B 171 108.41 -160.95 REMARK 500 LYS B 183 -169.81 -110.70 REMARK 500 ARG B 194 51.90 37.77 REMARK 500 LYS B 206 115.66 -24.71 REMARK 500 ASN B 209 44.76 28.44 REMARK 500 ALA B 253 -56.30 154.76 REMARK 500 GLN B 279 -36.41 -38.14 REMARK 500 PHE C 26 136.55 78.52 REMARK 500 ARG C 67 -61.22 -98.43 REMARK 500 ARG C 74 -129.34 44.75 REMARK 500 SER C 164 -63.43 -91.93 REMARK 500 ASN C 171 108.04 -160.96 REMARK 500 PRO C 188 173.90 -52.84 REMARK 500 ASN C 209 43.31 28.63 REMARK 500 GLN C 279 -38.84 -37.60 REMARK 500 ARG D 67 -60.35 -100.42 REMARK 500 ARG D 74 -129.15 43.97 REMARK 500 SER D 164 -63.42 -91.84 REMARK 500 ASN D 171 108.49 -161.34 REMARK 500 ARG D 194 49.84 39.81 REMARK 500 ASN D 209 41.61 30.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 436 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 440 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH C 448 DISTANCE = 7.84 ANGSTROMS REMARK 525 HOH C 449 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH C 450 DISTANCE = 8.97 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 162 SG REMARK 620 2 CYS A 165 SG 100.4 REMARK 620 3 CYS A 203 SG 109.5 110.5 REMARK 620 4 CYS A 208 SG 100.9 115.7 117.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 162 SG REMARK 620 2 CYS B 165 SG 100.3 REMARK 620 3 CYS B 203 SG 110.4 109.0 REMARK 620 4 CYS B 208 SG 98.0 114.1 122.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 162 SG REMARK 620 2 CYS C 165 SG 97.8 REMARK 620 3 CYS C 203 SG 117.3 115.5 REMARK 620 4 CYS C 208 SG 94.3 111.7 116.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 162 SG REMARK 620 2 CYS D 165 SG 97.3 REMARK 620 3 CYS D 203 SG 114.8 116.4 REMARK 620 4 CYS D 208 SG 96.0 111.7 117.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BV8 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVT C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVT D 303 DBREF 6EO0 A 28 298 UNP Q6DHI5 SIR5_DANRE 28 298 DBREF 6EO0 B 28 298 UNP Q6DHI5 SIR5_DANRE 28 298 DBREF 6EO0 C 28 298 UNP Q6DHI5 SIR5_DANRE 28 298 DBREF 6EO0 D 28 298 UNP Q6DHI5 SIR5_DANRE 28 298 SEQADV 6EO0 GLY A 22 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ILE A 23 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ASP A 24 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PRO A 25 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PHE A 26 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 THR A 27 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 GLY B 22 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ILE B 23 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ASP B 24 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PRO B 25 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PHE B 26 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 THR B 27 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 GLY C 22 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ILE C 23 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ASP C 24 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PRO C 25 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PHE C 26 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 THR C 27 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 GLY D 22 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ILE D 23 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 ASP D 24 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PRO D 25 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 PHE D 26 UNP Q6DHI5 EXPRESSION TAG SEQADV 6EO0 THR D 27 UNP Q6DHI5 EXPRESSION TAG SEQRES 1 A 277 GLY ILE ASP PRO PHE THR LYS MET THR ARG PRO SER SER SEQRES 2 A 277 ASP LEU THR ALA PHE ARG GLU HIS PHE ALA LYS ALA LYS SEQRES 3 A 277 HIS ILE ALA ILE ILE THR GLY ALA GLY VAL SER ALA GLU SEQRES 4 A 277 SER GLY VAL PRO THR PHE ARG GLY PRO GLY GLY PHE TRP SEQRES 5 A 277 ARG LYS TRP GLN ALA GLN ASP LEU ALA THR PRO GLU ALA SEQRES 6 A 277 PHE SER ARG ASP PRO SER LEU VAL TRP GLU PHE TYR HIS SEQRES 7 A 277 TYR ARG ARG GLU VAL MET ARG SER LYS MET PRO ASN PRO SEQRES 8 A 277 ALA HIS LEU ALA ILE ALA GLU CYS GLU ALA ARG LEU GLY SEQRES 9 A 277 GLN GLN GLY ARG SER VAL VAL ILE ILE THR GLN ASN ILE SEQRES 10 A 277 ASP GLU LEU HIS HIS ARG ALA GLY SER LYS HIS VAL TYR SEQRES 11 A 277 GLU ILE HIS GLY SER LEU PHE LYS THR ARG CYS MET SER SEQRES 12 A 277 CYS GLY GLU VAL LYS ALA ASN HIS LYS SER PRO ILE CYS SEQRES 13 A 277 PRO ALA LEU ASP GLY LYS GLY ALA PRO ASP PRO ASN THR SEQRES 14 A 277 LYS GLU ALA ARG ILE PRO VAL GLU LEU LEU PRO ARG CYS SEQRES 15 A 277 GLU ARG LYS SER CYS ASN GLY LEU LEU ARG PRO HIS VAL SEQRES 16 A 277 VAL TRP PHE GLY GLU THR LEU ASP SER ASP ILE LEU THR SEQRES 17 A 277 ALA VAL GLU ARG GLU LEU GLU LYS CYS ASP LEU CYS LEU SEQRES 18 A 277 VAL VAL GLY THR SER SER ILE VAL TYR PRO ALA ALA MET SEQRES 19 A 277 PHE ALA PRO GLN VAL ALA SER ARG GLY VAL PRO VAL ALA SEQRES 20 A 277 GLU PHE ASN MET GLU CYS THR PRO ALA THR GLN ARG PHE SEQRES 21 A 277 LYS TYR HIS PHE GLU GLY PRO CYS GLY SER THR LEU PRO SEQRES 22 A 277 PRO ALA LEU GLU SEQRES 1 B 277 GLY ILE ASP PRO PHE THR LYS MET THR ARG PRO SER SER SEQRES 2 B 277 ASP LEU THR ALA PHE ARG GLU HIS PHE ALA LYS ALA LYS SEQRES 3 B 277 HIS ILE ALA ILE ILE THR GLY ALA GLY VAL SER ALA GLU SEQRES 4 B 277 SER GLY VAL PRO THR PHE ARG GLY PRO GLY GLY PHE TRP SEQRES 5 B 277 ARG LYS TRP GLN ALA GLN ASP LEU ALA THR PRO GLU ALA SEQRES 6 B 277 PHE SER ARG ASP PRO SER LEU VAL TRP GLU PHE TYR HIS SEQRES 7 B 277 TYR ARG ARG GLU VAL MET ARG SER LYS MET PRO ASN PRO SEQRES 8 B 277 ALA HIS LEU ALA ILE ALA GLU CYS GLU ALA ARG LEU GLY SEQRES 9 B 277 GLN GLN GLY ARG SER VAL VAL ILE ILE THR GLN ASN ILE SEQRES 10 B 277 ASP GLU LEU HIS HIS ARG ALA GLY SER LYS HIS VAL TYR SEQRES 11 B 277 GLU ILE HIS GLY SER LEU PHE LYS THR ARG CYS MET SER SEQRES 12 B 277 CYS GLY GLU VAL LYS ALA ASN HIS LYS SER PRO ILE CYS SEQRES 13 B 277 PRO ALA LEU ASP GLY LYS GLY ALA PRO ASP PRO ASN THR SEQRES 14 B 277 LYS GLU ALA ARG ILE PRO VAL GLU LEU LEU PRO ARG CYS SEQRES 15 B 277 GLU ARG LYS SER CYS ASN GLY LEU LEU ARG PRO HIS VAL SEQRES 16 B 277 VAL TRP PHE GLY GLU THR LEU ASP SER ASP ILE LEU THR SEQRES 17 B 277 ALA VAL GLU ARG GLU LEU GLU LYS CYS ASP LEU CYS LEU SEQRES 18 B 277 VAL VAL GLY THR SER SER ILE VAL TYR PRO ALA ALA MET SEQRES 19 B 277 PHE ALA PRO GLN VAL ALA SER ARG GLY VAL PRO VAL ALA SEQRES 20 B 277 GLU PHE ASN MET GLU CYS THR PRO ALA THR GLN ARG PHE SEQRES 21 B 277 LYS TYR HIS PHE GLU GLY PRO CYS GLY SER THR LEU PRO SEQRES 22 B 277 PRO ALA LEU GLU SEQRES 1 C 277 GLY ILE ASP PRO PHE THR LYS MET THR ARG PRO SER SER SEQRES 2 C 277 ASP LEU THR ALA PHE ARG GLU HIS PHE ALA LYS ALA LYS SEQRES 3 C 277 HIS ILE ALA ILE ILE THR GLY ALA GLY VAL SER ALA GLU SEQRES 4 C 277 SER GLY VAL PRO THR PHE ARG GLY PRO GLY GLY PHE TRP SEQRES 5 C 277 ARG LYS TRP GLN ALA GLN ASP LEU ALA THR PRO GLU ALA SEQRES 6 C 277 PHE SER ARG ASP PRO SER LEU VAL TRP GLU PHE TYR HIS SEQRES 7 C 277 TYR ARG ARG GLU VAL MET ARG SER LYS MET PRO ASN PRO SEQRES 8 C 277 ALA HIS LEU ALA ILE ALA GLU CYS GLU ALA ARG LEU GLY SEQRES 9 C 277 GLN GLN GLY ARG SER VAL VAL ILE ILE THR GLN ASN ILE SEQRES 10 C 277 ASP GLU LEU HIS HIS ARG ALA GLY SER LYS HIS VAL TYR SEQRES 11 C 277 GLU ILE HIS GLY SER LEU PHE LYS THR ARG CYS MET SER SEQRES 12 C 277 CYS GLY GLU VAL LYS ALA ASN HIS LYS SER PRO ILE CYS SEQRES 13 C 277 PRO ALA LEU ASP GLY LYS GLY ALA PRO ASP PRO ASN THR SEQRES 14 C 277 LYS GLU ALA ARG ILE PRO VAL GLU LEU LEU PRO ARG CYS SEQRES 15 C 277 GLU ARG LYS SER CYS ASN GLY LEU LEU ARG PRO HIS VAL SEQRES 16 C 277 VAL TRP PHE GLY GLU THR LEU ASP SER ASP ILE LEU THR SEQRES 17 C 277 ALA VAL GLU ARG GLU LEU GLU LYS CYS ASP LEU CYS LEU SEQRES 18 C 277 VAL VAL GLY THR SER SER ILE VAL TYR PRO ALA ALA MET SEQRES 19 C 277 PHE ALA PRO GLN VAL ALA SER ARG GLY VAL PRO VAL ALA SEQRES 20 C 277 GLU PHE ASN MET GLU CYS THR PRO ALA THR GLN ARG PHE SEQRES 21 C 277 LYS TYR HIS PHE GLU GLY PRO CYS GLY SER THR LEU PRO SEQRES 22 C 277 PRO ALA LEU GLU SEQRES 1 D 277 GLY ILE ASP PRO PHE THR LYS MET THR ARG PRO SER SER SEQRES 2 D 277 ASP LEU THR ALA PHE ARG GLU HIS PHE ALA LYS ALA LYS SEQRES 3 D 277 HIS ILE ALA ILE ILE THR GLY ALA GLY VAL SER ALA GLU SEQRES 4 D 277 SER GLY VAL PRO THR PHE ARG GLY PRO GLY GLY PHE TRP SEQRES 5 D 277 ARG LYS TRP GLN ALA GLN ASP LEU ALA THR PRO GLU ALA SEQRES 6 D 277 PHE SER ARG ASP PRO SER LEU VAL TRP GLU PHE TYR HIS SEQRES 7 D 277 TYR ARG ARG GLU VAL MET ARG SER LYS MET PRO ASN PRO SEQRES 8 D 277 ALA HIS LEU ALA ILE ALA GLU CYS GLU ALA ARG LEU GLY SEQRES 9 D 277 GLN GLN GLY ARG SER VAL VAL ILE ILE THR GLN ASN ILE SEQRES 10 D 277 ASP GLU LEU HIS HIS ARG ALA GLY SER LYS HIS VAL TYR SEQRES 11 D 277 GLU ILE HIS GLY SER LEU PHE LYS THR ARG CYS MET SER SEQRES 12 D 277 CYS GLY GLU VAL LYS ALA ASN HIS LYS SER PRO ILE CYS SEQRES 13 D 277 PRO ALA LEU ASP GLY LYS GLY ALA PRO ASP PRO ASN THR SEQRES 14 D 277 LYS GLU ALA ARG ILE PRO VAL GLU LEU LEU PRO ARG CYS SEQRES 15 D 277 GLU ARG LYS SER CYS ASN GLY LEU LEU ARG PRO HIS VAL SEQRES 16 D 277 VAL TRP PHE GLY GLU THR LEU ASP SER ASP ILE LEU THR SEQRES 17 D 277 ALA VAL GLU ARG GLU LEU GLU LYS CYS ASP LEU CYS LEU SEQRES 18 D 277 VAL VAL GLY THR SER SER ILE VAL TYR PRO ALA ALA MET SEQRES 19 D 277 PHE ALA PRO GLN VAL ALA SER ARG GLY VAL PRO VAL ALA SEQRES 20 D 277 GLU PHE ASN MET GLU CYS THR PRO ALA THR GLN ARG PHE SEQRES 21 D 277 LYS TYR HIS PHE GLU GLY PRO CYS GLY SER THR LEU PRO SEQRES 22 D 277 PRO ALA LEU GLU HET ZN A 301 1 HET EDO A 302 4 HET BV8 A 303 80 HET BVT A 304 80 HET ZN B 301 1 HET EDO B 302 4 HET BVT B 303 80 HET ZN C 301 1 HET EDO C 302 4 HET BVT C 303 80 HET ZN D 301 1 HET EDO D 302 4 HET BVT D 303 80 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM BV8 3-[[(~{Z})-~{C}-[(2~{R},3~{R},4~{S},5~{R})-5- HETNAM 2 BV8 [[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-3, HETNAM 3 BV8 4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 4 BV8 PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXYMETHYL]-3,4- HETNAM 5 BV8 BIS(OXIDANYL)OXOLAN-2-YL]SULFANYL-~{N}-[(5~{S})-6- HETNAM 6 BV8 [[(2~{S})-3-(1~{H}-INDOL-3-YL)-1-OXIDANYLIDENE-1- HETNAM 7 BV8 (PROPAN-2-YLAMINO)PROPAN-2-YL]AMINO]-6-OXIDANYLIDENE- HETNAM 8 BV8 5-(PHENYLMETHOXYCARBONYLAMINO) HETNAM 9 BV8 HEXYL]CARBONIMIDOYL]AMINO]PROPANOIC ACID HETNAM BVT 3-[[(2~{S},3~{A}~{R},5~{R},6~{R},6~{A}~{R})-5- HETNAM 2 BVT [[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-3, HETNAM 3 BVT 4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 4 BVT PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXYMETHYL]-2- HETNAM 5 BVT [[(5~{S})-6-[[(2~{S})-3-(1~{H}-INDOL-3-YL)-1- HETNAM 6 BVT OXIDANYLIDENE-1-(PROPAN-2-YLAMINO)PROPAN-2-YL]AMINO]- HETNAM 7 BVT 6-OXIDANYLIDENE-5-(PHENYLMETHOXYCARBONYLAMINO) HETNAM 8 BVT HEXYL]AMINO]-6-OXIDANYL-3~{A},5,6,6~{A}- HETNAM 9 BVT TETRAHYDROFURO[2,3-D][1,3]OXATHIOL-2- HETNAM 10 BVT YL]AMINO]PROPANOIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 5 ZN 4(ZN 2+) FORMUL 6 EDO 4(C2 H6 O2) FORMUL 7 BV8 C47 H63 N11 O19 P2 S FORMUL 8 BVT 4(C47 H63 N11 O19 P2 S) FORMUL 18 HOH *176(H2 O) HELIX 1 AA1 ASP A 35 LYS A 45 1 11 HELIX 2 AA2 ALA A 55 GLU A 60 1 6 HELIX 3 AA3 GLY A 68 GLY A 70 5 3 HELIX 4 AA4 ALA A 78 ALA A 82 1 5 HELIX 5 AA5 THR A 83 ASP A 90 1 8 HELIX 6 AA6 ASP A 90 LYS A 108 1 19 HELIX 7 AA7 ASN A 111 GLN A 127 1 17 HELIX 8 AA8 GLU A 140 GLY A 146 1 7 HELIX 9 AA9 CYS A 177 ASP A 181 5 5 HELIX 10 AB1 PRO A 196 LEU A 200 5 5 HELIX 11 AB2 ASP A 224 CYS A 238 1 15 HELIX 12 AB3 PRO A 252 ALA A 254 5 3 HELIX 13 AB4 MET A 255 SER A 262 1 8 HELIX 14 AB5 ALA A 277 PHE A 281 5 5 HELIX 15 AB6 PRO A 288 GLU A 298 1 11 HELIX 16 AB7 ASP B 35 LYS B 45 1 11 HELIX 17 AB8 ALA B 55 GLU B 60 1 6 HELIX 18 AB9 GLY B 68 GLY B 70 5 3 HELIX 19 AC1 ALA B 78 ALA B 82 1 5 HELIX 20 AC2 THR B 83 ASP B 90 1 8 HELIX 21 AC3 ASP B 90 LYS B 108 1 19 HELIX 22 AC4 ASN B 111 GLN B 127 1 17 HELIX 23 AC5 GLU B 140 GLY B 146 1 7 HELIX 24 AC6 CYS B 177 ASP B 181 5 5 HELIX 25 AC7 PRO B 196 LEU B 200 5 5 HELIX 26 AC8 ASP B 224 CYS B 238 1 15 HELIX 27 AC9 MET B 255 SER B 262 1 8 HELIX 28 AD1 ALA B 277 PHE B 281 5 5 HELIX 29 AD2 PRO B 288 GLU B 298 1 11 HELIX 30 AD3 ASP C 35 LYS C 45 1 11 HELIX 31 AD4 ALA C 55 GLU C 60 1 6 HELIX 32 AD5 GLY C 68 GLY C 70 5 3 HELIX 33 AD6 ALA C 78 ALA C 82 1 5 HELIX 34 AD7 THR C 83 ASP C 90 1 8 HELIX 35 AD8 ASP C 90 LYS C 108 1 19 HELIX 36 AD9 ASN C 111 GLN C 127 1 17 HELIX 37 AE1 GLU C 140 GLY C 146 1 7 HELIX 38 AE2 CYS C 177 ASP C 181 5 5 HELIX 39 AE3 PRO C 196 LEU C 200 5 5 HELIX 40 AE4 ASP C 224 CYS C 238 1 15 HELIX 41 AE5 PRO C 252 ALA C 254 5 3 HELIX 42 AE6 MET C 255 SER C 262 1 8 HELIX 43 AE7 ALA C 277 PHE C 281 5 5 HELIX 44 AE8 PRO C 288 GLU C 298 1 11 HELIX 45 AE9 ASP D 35 LYS D 45 1 11 HELIX 46 AF1 ALA D 55 GLU D 60 1 6 HELIX 47 AF2 GLY D 68 GLY D 70 5 3 HELIX 48 AF3 ALA D 78 ALA D 82 1 5 HELIX 49 AF4 THR D 83 ASP D 90 1 8 HELIX 50 AF5 ASP D 90 LYS D 108 1 19 HELIX 51 AF6 ASN D 111 GLN D 127 1 17 HELIX 52 AF7 GLU D 140 GLY D 146 1 7 HELIX 53 AF8 CYS D 177 ASP D 181 5 5 HELIX 54 AF9 PRO D 196 LEU D 200 5 5 HELIX 55 AG1 ASP D 224 CYS D 238 1 15 HELIX 56 AG2 PRO D 252 ALA D 254 5 3 HELIX 57 AG3 MET D 255 SER D 262 1 8 HELIX 58 AG4 ALA D 277 PHE D 281 5 5 HELIX 59 AG5 PRO D 288 GLU D 298 1 11 SHEET 1 AA1 6 VAL A 150 GLU A 152 0 SHEET 2 AA1 6 SER A 130 THR A 135 1 N ILE A 133 O TYR A 151 SHEET 3 AA1 6 HIS A 48 THR A 53 1 N ILE A 51 O VAL A 132 SHEET 4 AA1 6 LEU A 240 VAL A 244 1 O LEU A 242 N ILE A 52 SHEET 5 AA1 6 VAL A 267 ASN A 271 1 O PHE A 270 N VAL A 243 SHEET 6 AA1 6 TYR A 283 GLU A 286 1 O PHE A 285 N GLU A 269 SHEET 1 AA2 2 PHE A 72 TRP A 73 0 SHEET 2 AA2 2 TRP A 76 GLN A 77 -1 O TRP A 76 N TRP A 73 SHEET 1 AA3 3 VAL A 168 ALA A 170 0 SHEET 2 AA3 3 GLY A 155 CYS A 162 -1 N THR A 160 O LYS A 169 SHEET 3 AA3 3 LEU A 212 VAL A 216 -1 O HIS A 215 N LYS A 159 SHEET 1 AA4 6 VAL B 150 GLU B 152 0 SHEET 2 AA4 6 SER B 130 THR B 135 1 N ILE B 133 O TYR B 151 SHEET 3 AA4 6 HIS B 48 THR B 53 1 N ILE B 51 O VAL B 132 SHEET 4 AA4 6 LEU B 240 VAL B 244 1 O LEU B 242 N ILE B 52 SHEET 5 AA4 6 VAL B 267 ASN B 271 1 O PHE B 270 N VAL B 243 SHEET 6 AA4 6 TYR B 283 GLU B 286 1 O PHE B 285 N GLU B 269 SHEET 1 AA5 2 PHE B 72 TRP B 73 0 SHEET 2 AA5 2 TRP B 76 GLN B 77 -1 O TRP B 76 N TRP B 73 SHEET 1 AA6 3 VAL B 168 ALA B 170 0 SHEET 2 AA6 3 GLY B 155 CYS B 162 -1 N THR B 160 O LYS B 169 SHEET 3 AA6 3 LEU B 212 VAL B 216 -1 O HIS B 215 N LYS B 159 SHEET 1 AA7 6 VAL C 150 GLU C 152 0 SHEET 2 AA7 6 SER C 130 THR C 135 1 N ILE C 133 O TYR C 151 SHEET 3 AA7 6 HIS C 48 THR C 53 1 N ILE C 51 O VAL C 132 SHEET 4 AA7 6 LEU C 240 VAL C 244 1 O LEU C 242 N ILE C 52 SHEET 5 AA7 6 VAL C 267 ASN C 271 1 O ALA C 268 N CYS C 241 SHEET 6 AA7 6 TYR C 283 GLU C 286 1 O PHE C 285 N GLU C 269 SHEET 1 AA8 2 PHE C 72 TRP C 73 0 SHEET 2 AA8 2 TRP C 76 GLN C 77 -1 O TRP C 76 N TRP C 73 SHEET 1 AA9 3 VAL C 168 ALA C 170 0 SHEET 2 AA9 3 GLY C 155 CYS C 162 -1 N THR C 160 O LYS C 169 SHEET 3 AA9 3 LEU C 212 VAL C 216 -1 O HIS C 215 N LYS C 159 SHEET 1 AB1 6 VAL D 150 GLU D 152 0 SHEET 2 AB1 6 SER D 130 THR D 135 1 N ILE D 133 O TYR D 151 SHEET 3 AB1 6 HIS D 48 THR D 53 1 N ILE D 51 O VAL D 132 SHEET 4 AB1 6 LEU D 240 VAL D 244 1 O LEU D 242 N ILE D 52 SHEET 5 AB1 6 VAL D 267 ASN D 271 1 O PHE D 270 N VAL D 243 SHEET 6 AB1 6 TYR D 283 GLU D 286 1 O PHE D 285 N GLU D 269 SHEET 1 AB2 2 PHE D 72 TRP D 73 0 SHEET 2 AB2 2 TRP D 76 GLN D 77 -1 O TRP D 76 N TRP D 73 SHEET 1 AB3 3 VAL D 168 ALA D 170 0 SHEET 2 AB3 3 GLY D 155 CYS D 162 -1 N THR D 160 O LYS D 169 SHEET 3 AB3 3 LEU D 212 VAL D 216 -1 O HIS D 215 N LYS D 159 LINK SG CYS A 162 ZN ZN A 301 1555 1555 2.34 LINK SG CYS A 165 ZN ZN A 301 1555 1555 2.25 LINK SG CYS A 203 ZN ZN A 301 1555 1555 2.30 LINK SG CYS A 208 ZN ZN A 301 1555 1555 2.36 LINK SG CYS B 162 ZN ZN B 301 1555 1555 2.37 LINK SG CYS B 165 ZN ZN B 301 1555 1555 2.30 LINK SG CYS B 203 ZN ZN B 301 1555 1555 2.30 LINK SG CYS B 208 ZN ZN B 301 1555 1555 2.39 LINK SG CYS C 162 ZN ZN C 301 1555 1555 2.34 LINK SG CYS C 165 ZN ZN C 301 1555 1555 2.34 LINK SG CYS C 203 ZN ZN C 301 1555 1555 2.31 LINK SG CYS C 208 ZN ZN C 301 1555 1555 2.33 LINK SG CYS D 162 ZN ZN D 301 1555 1555 2.34 LINK SG CYS D 165 ZN ZN D 301 1555 1555 2.32 LINK SG CYS D 203 ZN ZN D 301 1555 1555 2.33 LINK SG CYS D 208 ZN ZN D 301 1555 1555 2.33 CISPEP 1 SER A 174 PRO A 175 0 8.72 CISPEP 2 TYR A 251 PRO A 252 0 4.25 CISPEP 3 TYR A 251 PRO A 252 0 3.92 CISPEP 4 SER B 174 PRO B 175 0 9.91 CISPEP 5 TYR B 251 PRO B 252 0 -8.34 CISPEP 6 SER C 174 PRO C 175 0 9.69 CISPEP 7 TYR C 251 PRO C 252 0 4.77 CISPEP 8 TYR C 251 PRO C 252 0 4.27 CISPEP 9 SER D 174 PRO D 175 0 10.58 CISPEP 10 TYR D 251 PRO D 252 0 4.28 SITE 1 AC1 4 CYS A 162 CYS A 165 CYS A 203 CYS A 208 SITE 1 AC2 2 GLU A 286 PRO B 69 SITE 1 AC3 31 GLY A 54 ALA A 55 GLY A 56 ALA A 59 SITE 2 AC3 31 GLU A 60 THR A 65 PHE A 66 ARG A 67 SITE 3 AC3 31 TYR A 98 ARG A 101 GLN A 136 HIS A 154 SITE 4 AC3 31 VAL A 217 PHE A 219 GLY A 220 GLU A 221 SITE 5 AC3 31 THR A 222 LEU A 223 GLY A 245 THR A 246 SITE 6 AC3 31 SER A 247 VAL A 250 TYR A 251 ASN A 271 SITE 7 AC3 31 MET A 272 GLU A 273 CYS A 289 BVT A 304 SITE 8 AC3 31 TYR C 251 MET C 255 PHE C 256 SITE 1 AC4 33 GLY A 54 ALA A 55 GLY A 56 ALA A 59 SITE 2 AC4 33 GLU A 60 THR A 65 PHE A 66 ARG A 67 SITE 3 AC4 33 ALA A 82 TYR A 98 ARG A 101 GLN A 136 SITE 4 AC4 33 ILE A 138 HIS A 154 VAL A 217 PHE A 219 SITE 5 AC4 33 GLY A 220 GLU A 221 THR A 222 LEU A 223 SITE 6 AC4 33 GLY A 245 THR A 246 SER A 247 VAL A 250 SITE 7 AC4 33 TYR A 251 ASN A 271 MET A 272 GLU A 273 SITE 8 AC4 33 CYS A 289 BV8 A 303 TYR C 251 MET C 255 SITE 9 AC4 33 PHE C 256 SITE 1 AC5 4 CYS B 162 CYS B 165 CYS B 203 CYS B 208 SITE 1 AC6 5 LYS A 28 GLU B 85 ARG B 89 HOH B 409 SITE 2 AC6 5 SER D 262 SITE 1 AC7 36 GLY B 54 ALA B 55 GLY B 56 ALA B 59 SITE 2 AC7 36 GLU B 60 THR B 65 PHE B 66 ARG B 67 SITE 3 AC7 36 ALA B 82 TYR B 98 ARG B 101 GLN B 136 SITE 4 AC7 36 ILE B 138 HIS B 154 VAL B 217 PHE B 219 SITE 5 AC7 36 GLY B 220 GLU B 221 THR B 222 GLY B 245 SITE 6 AC7 36 THR B 246 SER B 247 VAL B 250 TYR B 251 SITE 7 AC7 36 ASN B 271 MET B 272 GLU B 273 CYS B 289 SITE 8 AC7 36 LEU D 228 TYR D 251 MET D 255 PHE D 256 SITE 9 AC7 36 PRO D 258 GLN D 259 ARG D 280 EDO D 302 SITE 1 AC8 4 CYS C 162 CYS C 165 CYS C 203 CYS C 208 SITE 1 AC9 3 LEU A 228 LEU C 223 LEU C 228 SITE 1 AD1 37 TYR A 251 MET A 255 PHE A 256 PRO A 258 SITE 2 AD1 37 GLN A 259 GLY C 54 ALA C 55 GLY C 56 SITE 3 AD1 37 ALA C 59 GLU C 60 THR C 65 PHE C 66 SITE 4 AD1 37 ARG C 67 ALA C 82 TYR C 98 ARG C 101 SITE 5 AD1 37 GLN C 136 ILE C 138 HIS C 154 VAL C 217 SITE 6 AD1 37 TRP C 218 PHE C 219 GLY C 220 GLU C 221 SITE 7 AD1 37 THR C 222 GLY C 245 THR C 246 SER C 247 SITE 8 AD1 37 VAL C 250 TYR C 251 ASN C 271 MET C 272 SITE 9 AD1 37 GLU C 273 CYS C 289 HOH C 405 HOH C 412 SITE 10 AD1 37 HOH C 422 SITE 1 AD2 4 CYS D 162 CYS D 165 CYS D 203 CYS D 208 SITE 1 AD3 2 BVT B 303 HOH D 417 SITE 1 AD4 32 MET B 255 PHE B 256 GLN B 259 GLY D 54 SITE 2 AD4 32 ALA D 55 GLY D 56 ALA D 59 THR D 65 SITE 3 AD4 32 PHE D 66 ARG D 67 ALA D 82 TYR D 98 SITE 4 AD4 32 ARG D 101 GLN D 136 HIS D 154 VAL D 216 SITE 5 AD4 32 VAL D 217 PHE D 219 GLY D 220 GLU D 221 SITE 6 AD4 32 THR D 222 GLY D 245 THR D 246 SER D 247 SITE 7 AD4 32 VAL D 250 TYR D 251 ASN D 271 MET D 272 SITE 8 AD4 32 GLU D 273 GLY D 287 PRO D 288 CYS D 289 CRYST1 64.930 113.590 72.310 90.00 103.24 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015401 0.000000 0.003622 0.00000 SCALE2 0.000000 0.008804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014207 0.00000