data_6ERL # _entry.id 6ERL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ERL pdb_00006erl 10.2210/pdb6erl/pdb WWPDB D_1200006818 ? ? BMRB 34186 ? 10.13018/BMR34186 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2019-05-08 3 'Structure model' 1 2 2023-06-14 4 'Structure model' 1 3 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_nmr_software 2 2 'Structure model' pdbx_seq_map_depositor_info 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_nmr_spectrometer 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_nmr_software.name' 2 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 6 3 'Structure model' '_pdbx_nmr_spectrometer.model' 7 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6ERL _pdbx_database_status.recvd_initial_deposition_date 2017-10-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Quadruplex with flipped tetrad formed by the c-myc promoter sequence' _pdbx_database_related.db_id 34186 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Karg, B.' 1 ? 'Weisz, K.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chemistry _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1521-3765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Loop Length Affects Syn-Anti Conformational Rearrangements in Parallel G-Quadruplexes.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/chem.201801851 _citation.pdbx_database_id_PubMed 29756658 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Karg, B.' 1 ? primary 'Weisz, K.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description cmbr-481317 _entity.formula_weight 7324.094 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(DT)(DG)(DA)(BGM)(DG)(DG)(DT)(BGM)(DG)(DG)(DT)(DA)(BGM)(DG)(DG)(DT)(BGM)(DG)(DG) (DT)(DA)(DA) ; _entity_poly.pdbx_seq_one_letter_code_can TGAGGGTGGGTAGGGTGGGTAA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DA n 1 4 BGM n 1 5 DG n 1 6 DG n 1 7 DT n 1 8 BGM n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DA n 1 13 BGM n 1 14 DG n 1 15 DG n 1 16 DT n 1 17 BGM n 1 18 DG n 1 19 DG n 1 20 DT n 1 21 DA n 1 22 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BGM 'DNA linking' n "8-BROMO-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 Br N5 O7 P' 426.117 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 BGM 4 4 4 BGM BGM A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 BGM 8 8 8 BGM BGM A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 BGM 13 13 13 BGM BGM A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 BGM 17 17 17 BGM BGM A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DT 20 20 20 DT DT A . n A 1 21 DA 21 21 21 DA DA A . n A 1 22 DA 22 22 22 DA DA A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ERL _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6ERL _struct.title 'Quadruplex with flipped tetrad formed by the c-myc promoter sequence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ERL _struct_keywords.text 'Quadruplex, G4, 8-Bromo-Guanosine, tetrad flip, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6ERL _struct_ref.pdbx_db_accession 6ERL _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ERL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6ERL _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2780 ? 1 MORE 22 ? 1 'SSA (A^2)' 3300 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 3 "O3'" ? ? ? 1_555 A BGM 4 P ? ? A DA 3 A BGM 4 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? A BGM 4 "O3'" ? ? ? 1_555 A DG 5 P ? ? A BGM 4 A DG 5 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale3 covale both ? A DT 7 "O3'" ? ? ? 1_555 A BGM 8 P ? ? A DT 7 A BGM 8 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale4 covale both ? A BGM 8 "O3'" ? ? ? 1_555 A DG 9 P ? ? A BGM 8 A DG 9 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale5 covale both ? A DA 12 "O3'" ? ? ? 1_555 A BGM 13 P ? ? A DA 12 A BGM 13 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale6 covale both ? A BGM 13 "O3'" ? ? ? 1_555 A DG 14 P ? ? A BGM 13 A DG 14 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale7 covale both ? A DT 16 "O3'" ? ? ? 1_555 A BGM 17 P ? ? A DT 16 A BGM 17 1_555 ? ? ? ? ? ? ? 1.617 ? ? covale8 covale both ? A BGM 17 "O3'" ? ? ? 1_555 A DG 18 P ? ? A BGM 17 A DG 18 1_555 ? ? ? ? ? ? ? 1.614 ? ? hydrog1 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A BGM 8 N1 ? ? A DA 3 A BGM 8 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog2 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A BGM 8 O6 ? ? A DA 3 A BGM 8 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog3 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A BGM 13 O6 ? ? A DA 3 A BGM 13 1_555 ? ? ? ? ? ? 'DA-BGM MISPAIR' ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A BGM 17 O6 ? ? A DA 3 A BGM 17 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog5 hydrog ? ? A DA 3 N7 ? ? ? 1_555 A BGM 17 N1 ? ? A DA 3 A BGM 17 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog6 hydrog ? ? A BGM 4 N7 ? ? ? 1_555 A BGM 8 N2 ? ? A BGM 4 A BGM 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A BGM 4 O6 ? ? ? 1_555 A BGM 8 N1 ? ? A BGM 4 A BGM 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A BGM 4 N1 ? ? ? 1_555 A BGM 17 O6 ? ? A BGM 4 A BGM 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A BGM 4 N2 ? ? ? 1_555 A BGM 17 N7 ? ? A BGM 4 A BGM 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 19 N2 ? ? A DG 6 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 19 N1 ? ? A DG 6 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A BGM 8 N7 ? ? ? 1_555 A BGM 13 N2 ? ? A BGM 8 A BGM 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A BGM 8 O6 ? ? ? 1_555 A BGM 13 N1 ? ? A BGM 8 A BGM 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DA 12 N3 ? ? A DG 9 A DA 12 1_555 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A BGM 13 N7 ? ? ? 1_555 A BGM 17 N2 ? ? A BGM 13 A BGM 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A BGM 13 O6 ? ? ? 1_555 A BGM 17 N1 ? ? A BGM 13 A BGM 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 19 O6 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 19 N7 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A DT 20 N3 ? ? ? 1_555 A DA 22 N7 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog32 hydrog ? ? A DT 20 O4 ? ? ? 1_555 A DA 22 N6 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.29 108.30 3.99 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.27 122.90 -3.63 0.60 N 3 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.17 108.30 3.87 0.30 N 4 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.09 108.30 4.79 0.30 N 5 1 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.51 117.00 -3.49 0.50 N 6 1 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.63 117.70 3.93 0.50 N 7 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.11 118.60 -5.49 0.60 N 8 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.71 108.30 5.41 0.30 N 9 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.57 122.90 -4.33 0.60 N 10 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.43 108.30 3.13 0.30 N 11 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.06 108.30 3.76 0.30 N 12 1 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.28 122.90 -3.62 0.60 N 13 1 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.58 117.00 -3.42 0.50 N 14 1 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.23 117.70 3.53 0.50 N 15 1 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.13 118.60 -5.47 0.60 N 16 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.34 108.30 3.04 0.30 N 17 1 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.79 108.30 4.49 0.30 N 18 1 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.29 108.30 2.99 0.30 N 19 1 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.12 108.30 2.82 0.30 N 20 1 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.81 108.30 3.51 0.30 N 21 1 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.55 117.00 -3.45 0.50 N 22 1 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.35 117.70 3.65 0.50 N 23 1 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.15 118.60 -5.45 0.60 N 24 1 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 110.97 108.30 2.67 0.30 N 25 1 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.44 117.00 -3.56 0.50 N 26 1 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.54 117.70 3.84 0.50 N 27 1 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 111.83 118.60 -6.77 0.60 N 28 2 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.41 108.30 3.11 0.30 N 29 2 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.19 122.90 -3.71 0.60 N 30 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 116.82 108.30 8.52 0.30 N 31 2 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 111.44 108.30 3.14 0.30 N 32 2 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.64 117.00 -3.36 0.50 N 33 2 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.60 117.70 3.90 0.50 N 34 2 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.04 118.60 -5.56 0.60 N 35 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.28 108.30 3.98 0.30 N 36 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 114.01 108.30 5.71 0.30 N 37 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.76 108.30 5.46 0.30 N 38 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.74 108.30 3.44 0.30 N 39 2 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.17 122.90 -3.73 0.60 N 40 2 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.73 117.00 -3.27 0.50 N 41 2 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.34 117.70 3.64 0.50 N 42 2 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.25 118.60 -5.35 0.60 N 43 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.82 108.30 2.52 0.30 N 44 2 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.76 108.30 5.46 0.30 N 45 2 N3 A DT 16 ? ? C2 A DT 16 ? ? O2 A DT 16 ? ? 118.60 122.30 -3.70 0.60 N 46 2 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.11 108.30 2.81 0.30 N 47 2 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.79 108.30 4.49 0.30 N 48 2 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 110.63 108.30 2.33 0.30 N 49 2 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.60 122.30 -3.70 0.60 N 50 2 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.26 122.90 -3.64 0.60 N 51 2 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.78 117.00 -3.22 0.50 N 52 2 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.39 117.70 3.69 0.50 N 53 2 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.00 118.60 -5.60 0.60 N 54 2 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 112.16 108.30 3.86 0.30 N 55 2 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.46 117.00 -3.54 0.50 N 56 2 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.37 117.70 3.67 0.50 N 57 2 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 112.89 118.60 -5.71 0.60 N 58 3 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.55 108.30 3.25 0.30 N 59 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.33 108.30 4.03 0.30 N 60 3 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 112.50 108.30 4.20 0.30 N 61 3 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.58 117.00 -3.42 0.50 N 62 3 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.53 117.70 3.83 0.50 N 63 3 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.05 118.60 -5.55 0.60 N 64 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.68 108.30 4.38 0.30 N 65 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.81 108.30 3.51 0.30 N 66 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.87 108.30 4.57 0.30 N 67 3 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.24 122.90 -3.66 0.60 N 68 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.86 108.30 2.56 0.30 N 69 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.93 108.30 3.63 0.30 N 70 3 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.69 117.00 -3.31 0.50 N 71 3 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.42 117.70 3.72 0.50 N 72 3 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.18 118.60 -5.42 0.60 N 73 3 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.14 108.30 4.84 0.30 N 74 3 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.66 108.30 3.36 0.30 N 75 3 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.41 108.30 4.11 0.30 N 76 3 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 113.23 108.30 4.93 0.30 N 77 3 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.49 117.00 -3.51 0.50 N 78 3 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.39 117.70 3.69 0.50 N 79 3 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.12 118.60 -5.48 0.60 N 80 3 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 110.71 108.30 2.41 0.30 N 81 3 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.36 117.00 -3.64 0.50 N 82 3 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.53 117.70 3.83 0.50 N 83 3 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 111.95 118.60 -6.65 0.60 N 84 4 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.06 108.30 3.76 0.30 N 85 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.35 108.30 4.05 0.30 N 86 4 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 112.59 108.30 4.29 0.30 N 87 4 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.77 117.00 -3.23 0.50 N 88 4 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.64 117.70 3.94 0.50 N 89 4 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.44 118.60 -5.16 0.60 N 90 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.78 108.30 4.48 0.30 N 91 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.79 108.30 2.49 0.30 N 92 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.70 108.30 4.40 0.30 N 93 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.74 108.30 2.44 0.30 N 94 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.55 108.30 3.25 0.30 N 95 4 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.03 122.90 -3.87 0.60 N 96 4 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.63 117.00 -3.37 0.50 N 97 4 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.44 117.70 3.74 0.50 N 98 4 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.14 118.60 -5.46 0.60 N 99 4 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.24 108.30 4.94 0.30 N 100 4 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.06 108.30 2.76 0.30 N 101 4 N3 A DG 18 ? ? C2 A DG 18 ? ? N2 A DG 18 ? ? 115.70 119.90 -4.20 0.70 N 102 4 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.87 108.30 3.57 0.30 N 103 4 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.69 108.30 3.39 0.30 N 104 4 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.61 122.30 -3.69 0.60 N 105 4 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.20 122.90 -3.70 0.60 N 106 4 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.78 117.00 -3.22 0.50 N 107 4 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.40 117.70 3.70 0.50 N 108 4 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.05 118.60 -5.55 0.60 N 109 4 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.68 108.30 3.38 0.30 N 110 4 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.47 117.00 -3.53 0.50 N 111 4 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.36 117.70 3.66 0.50 N 112 4 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 112.68 118.60 -5.92 0.60 N 113 5 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.61 108.30 3.31 0.30 N 114 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.15 108.30 3.85 0.30 N 115 5 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.22 108.30 4.92 0.30 N 116 5 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.38 117.00 -3.62 0.50 N 117 5 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.72 117.70 4.02 0.50 N 118 5 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.86 118.60 -5.74 0.60 N 119 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.90 108.30 4.60 0.30 N 120 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.51 108.30 2.21 0.30 N 121 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.68 108.30 4.38 0.30 N 122 5 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.18 122.90 -3.72 0.60 N 123 5 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.70 117.00 -3.30 0.50 N 124 5 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.37 117.70 3.67 0.50 N 125 5 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.07 118.60 -5.53 0.60 N 126 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.64 108.30 3.34 0.30 N 127 5 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.84 108.30 2.54 0.30 N 128 5 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.41 108.30 4.11 0.30 N 129 5 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.74 108.30 2.44 0.30 N 130 5 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 110.65 108.30 2.35 0.30 N 131 5 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.92 117.00 -3.08 0.50 N 132 5 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.31 117.70 3.61 0.50 N 133 5 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.08 118.60 -5.52 0.60 N 134 5 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 112.72 108.30 4.42 0.30 N 135 5 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.37 117.00 -3.63 0.50 N 136 5 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.51 117.70 3.81 0.50 N 137 5 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.06 118.60 -5.54 0.60 N 138 6 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.06 108.30 2.76 0.30 N 139 6 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.18 122.90 -3.72 0.60 N 140 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.03 108.30 3.73 0.30 N 141 6 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.15 108.30 4.85 0.30 N 142 6 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.51 117.00 -3.49 0.50 N 143 6 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.57 117.70 3.87 0.50 N 144 6 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.06 118.60 -5.54 0.60 N 145 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.31 108.30 2.01 0.30 N 146 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.51 108.30 4.21 0.30 N 147 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.29 122.90 -3.61 0.60 N 148 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.28 108.30 1.98 0.30 N 149 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.17 108.30 4.87 0.30 N 150 6 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.51 108.30 2.21 0.30 N 151 6 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.74 117.00 -3.26 0.50 N 152 6 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.41 117.70 3.71 0.50 N 153 6 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.28 118.60 -5.32 0.60 N 154 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.53 108.30 2.23 0.30 N 155 6 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.35 108.30 4.05 0.30 N 156 6 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.69 108.30 2.39 0.30 N 157 6 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.79 108.30 3.49 0.30 N 158 6 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.75 108.30 3.45 0.30 N 159 6 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.63 122.30 -3.67 0.60 N 160 6 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 118.59 122.90 -4.31 0.60 N 161 6 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.75 117.00 -3.25 0.50 N 162 6 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.42 117.70 3.72 0.50 N 163 6 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.00 118.60 -5.60 0.60 N 164 6 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.78 108.30 3.48 0.30 N 165 6 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.70 117.00 -3.30 0.50 N 166 6 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.41 117.70 3.71 0.50 N 167 6 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.44 118.60 -5.16 0.60 N 168 7 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.24 108.30 2.94 0.30 N 169 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.18 108.30 3.88 0.30 N 170 7 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.35 108.30 5.05 0.30 N 171 7 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.53 117.00 -3.47 0.50 N 172 7 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.59 117.70 3.89 0.50 N 173 7 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.04 118.60 -5.56 0.60 N 174 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.16 108.30 1.86 0.30 N 175 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.09 108.30 4.79 0.30 N 176 7 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.33 122.30 -3.97 0.60 N 177 7 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.27 122.90 -3.63 0.60 N 178 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.58 108.30 2.28 0.30 N 179 7 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.96 108.30 3.66 0.30 N 180 7 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.66 117.00 -3.34 0.50 N 181 7 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.42 117.70 3.72 0.50 N 182 7 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.19 118.60 -5.41 0.60 N 183 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.62 108.30 2.32 0.30 N 184 7 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.21 108.30 4.91 0.30 N 185 7 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.40 108.30 3.10 0.30 N 186 7 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.51 108.30 3.21 0.30 N 187 7 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 112.51 108.30 4.21 0.30 N 188 7 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.56 122.30 -3.74 0.60 N 189 7 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.18 122.90 -3.72 0.60 N 190 7 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.74 117.00 -3.26 0.50 N 191 7 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.40 117.70 3.70 0.50 N 192 7 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.08 118.60 -5.52 0.60 N 193 7 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.89 108.30 3.59 0.30 N 194 7 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.58 117.00 -3.42 0.50 N 195 7 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.46 117.70 3.76 0.50 N 196 7 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.09 118.60 -5.51 0.60 N 197 8 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.63 108.30 3.33 0.30 N 198 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.88 108.30 3.58 0.30 N 199 8 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 112.61 108.30 4.31 0.30 N 200 8 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.60 117.00 -3.40 0.50 N 201 8 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.46 117.70 3.76 0.50 N 202 8 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.08 118.60 -5.52 0.60 N 203 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.39 108.30 4.09 0.30 N 204 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.30 108.30 5.00 0.30 N 205 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.37 108.30 2.07 0.30 N 206 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.63 108.30 4.33 0.30 N 207 8 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.24 122.90 -3.66 0.60 N 208 8 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.69 117.00 -3.31 0.50 N 209 8 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.38 117.70 3.68 0.50 N 210 8 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.09 118.60 -5.51 0.60 N 211 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.69 108.30 2.39 0.30 N 212 8 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.26 108.30 3.96 0.30 N 213 8 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.76 108.30 2.46 0.30 N 214 8 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.98 108.30 3.68 0.30 N 215 8 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.28 108.30 2.98 0.30 N 216 8 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.60 122.30 -3.70 0.60 N 217 8 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.22 122.90 -3.68 0.60 N 218 8 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.76 117.00 -3.24 0.50 N 219 8 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.42 117.70 3.72 0.50 N 220 8 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.05 118.60 -5.55 0.60 N 221 8 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 112.75 108.30 4.45 0.30 N 222 8 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.55 117.00 -3.45 0.50 N 223 8 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.48 117.70 3.78 0.50 N 224 8 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.01 118.60 -5.59 0.60 N 225 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.94 108.30 3.64 0.30 N 226 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.85 108.30 3.55 0.30 N 227 9 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.81 108.30 2.51 0.30 N 228 9 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.52 117.00 -3.48 0.50 N 229 9 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.43 117.70 3.73 0.50 N 230 9 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.22 118.60 -5.38 0.60 N 231 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.40 108.30 5.10 0.30 N 232 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.69 108.30 2.39 0.30 N 233 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.17 108.30 4.87 0.30 N 234 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.67 108.30 2.37 0.30 N 235 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.68 108.30 4.38 0.30 N 236 9 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.22 122.90 -3.68 0.60 N 237 9 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.62 117.00 -3.38 0.50 N 238 9 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.38 117.70 3.68 0.50 N 239 9 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.13 118.60 -5.47 0.60 N 240 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.53 108.30 3.23 0.30 N 241 9 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.99 108.30 2.69 0.30 N 242 9 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.70 108.30 4.40 0.30 N 243 9 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.41 108.30 2.11 0.30 N 244 9 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.30 108.30 2.00 0.30 N 245 9 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.11 108.30 2.81 0.30 N 246 9 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.85 117.00 -3.15 0.50 N 247 9 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.33 117.70 3.63 0.50 N 248 9 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.08 118.60 -5.52 0.60 N 249 9 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.91 108.30 3.61 0.30 N 250 9 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.36 117.00 -3.64 0.50 N 251 9 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.57 117.70 3.87 0.50 N 252 9 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.18 118.60 -5.42 0.60 N 253 10 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.80 108.30 2.50 0.30 N 254 10 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.27 122.90 -3.63 0.60 N 255 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.43 108.30 4.13 0.30 N 256 10 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.09 108.30 4.79 0.30 N 257 10 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.41 117.00 -3.59 0.50 N 258 10 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.62 117.70 3.92 0.50 N 259 10 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.93 118.60 -5.67 0.60 N 260 10 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.33 108.30 2.03 0.30 N 261 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.37 108.30 5.07 0.30 N 262 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.25 122.90 -3.65 0.60 N 263 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.77 108.30 2.47 0.30 N 264 10 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.39 108.30 4.09 0.30 N 265 10 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.20 122.90 -3.70 0.60 N 266 10 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.69 117.00 -3.31 0.50 N 267 10 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.42 117.70 3.72 0.50 N 268 10 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.06 118.60 -5.54 0.60 N 269 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.88 108.30 2.58 0.30 N 270 10 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.54 108.30 2.24 0.30 N 271 10 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.70 108.30 5.40 0.30 N 272 10 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.44 108.30 2.14 0.30 N 273 10 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.35 108.30 4.05 0.30 N 274 10 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 112.38 108.30 4.08 0.30 N 275 10 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.64 122.30 -3.66 0.60 N 276 10 C4 A DA 21 ? ? C5 A DA 21 ? ? C6 A DA 21 ? ? 113.74 117.00 -3.26 0.50 N 277 10 C5 A DA 21 ? ? C6 A DA 21 ? ? N1 A DA 21 ? ? 121.35 117.70 3.65 0.50 N 278 10 N1 A DA 21 ? ? C6 A DA 21 ? ? N6 A DA 21 ? ? 113.15 118.60 -5.45 0.60 N 279 10 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.07 108.30 2.77 0.30 N 280 10 C4 A DA 22 ? ? C5 A DA 22 ? ? C6 A DA 22 ? ? 113.55 117.00 -3.45 0.50 N 281 10 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.63 117.70 3.93 0.50 N 282 10 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.21 118.60 -5.39 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 1 ? ? 0.062 'SIDE CHAIN' 2 1 DG A 10 ? ? 0.061 'SIDE CHAIN' 3 1 DA A 22 ? ? 0.097 'SIDE CHAIN' 4 2 DT A 1 ? ? 0.079 'SIDE CHAIN' 5 2 DG A 2 ? ? 0.066 'SIDE CHAIN' 6 2 DG A 5 ? ? 0.068 'SIDE CHAIN' 7 2 DG A 6 ? ? 0.065 'SIDE CHAIN' 8 2 DG A 10 ? ? 0.078 'SIDE CHAIN' 9 2 DG A 19 ? ? 0.061 'SIDE CHAIN' 10 2 DT A 20 ? ? 0.072 'SIDE CHAIN' 11 2 DA A 22 ? ? 0.057 'SIDE CHAIN' 12 3 DG A 5 ? ? 0.075 'SIDE CHAIN' 13 3 DG A 14 ? ? 0.058 'SIDE CHAIN' 14 3 DG A 15 ? ? 0.061 'SIDE CHAIN' 15 3 DA A 22 ? ? 0.102 'SIDE CHAIN' 16 4 DG A 6 ? ? 0.073 'SIDE CHAIN' 17 4 DG A 15 ? ? 0.057 'SIDE CHAIN' 18 4 DG A 19 ? ? 0.061 'SIDE CHAIN' 19 5 DG A 10 ? ? 0.098 'SIDE CHAIN' 20 6 DG A 6 ? ? 0.050 'SIDE CHAIN' 21 6 DG A 19 ? ? 0.063 'SIDE CHAIN' 22 7 DG A 19 ? ? 0.068 'SIDE CHAIN' 23 8 DG A 5 ? ? 0.053 'SIDE CHAIN' 24 8 DG A 6 ? ? 0.070 'SIDE CHAIN' 25 8 DG A 10 ? ? 0.110 'SIDE CHAIN' 26 8 DG A 19 ? ? 0.061 'SIDE CHAIN' 27 9 DG A 5 ? ? 0.063 'SIDE CHAIN' 28 9 DG A 10 ? ? 0.093 'SIDE CHAIN' 29 10 DG A 10 ? ? 0.102 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 6ERL _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6ERL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '10 mM NA potassium phosphate, 90% H2O/10% D2O' '90% H2O/10% D2O' A solution ? 2 '10 mM NA potassium phosphate, 100% D2O' '100% D2O' B solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'potassium phosphate' 10 ? mM NA 2 'potassium phosphate' 10 ? mM NA # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 10 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH* _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D DQF-COSY' 1 isotropic 3 1 2 '2D 1H-1H NOESY' 1 isotropic # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 6ERL 'DGSA-distance geometry simulated annealing' ? 2 6ERL 'simulated annealing' ? 1 6ERL 'molecular dynamics' ? 5 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' Xplor-NIH ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 4 'peak picking' 'CcpNmr Analysis' ? CCPN 5 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BGM P P N N 1 BGM OP1 O N N 2 BGM OP2 O N N 3 BGM "O5'" O N N 4 BGM "C5'" C N N 5 BGM "C4'" C N R 6 BGM "O4'" O N N 7 BGM "C1'" C N R 8 BGM N9 N Y N 9 BGM C8 C Y N 10 BGM N7 N Y N 11 BGM C5 C Y N 12 BGM C4 C Y N 13 BGM N3 N N N 14 BGM C2 C N N 15 BGM N2 N N N 16 BGM N1 N N N 17 BGM C6 C N N 18 BGM O6 O N N 19 BGM "C2'" C N N 20 BGM "C3'" C N S 21 BGM "O3'" O N N 22 BGM OP3 O N N 23 BGM BR BR N N 24 BGM HOP2 H N N 25 BGM "H5'" H N N 26 BGM "H5''" H N N 27 BGM "H4'" H N N 28 BGM "H1'" H N N 29 BGM H21 H N N 30 BGM H22 H N N 31 BGM H1 H N N 32 BGM "H2'" H N N 33 BGM "H2''" H N N 34 BGM "H3'" H N N 35 BGM "HO3'" H N N 36 BGM HOP3 H N N 37 DA OP3 O N N 38 DA P P N N 39 DA OP1 O N N 40 DA OP2 O N N 41 DA "O5'" O N N 42 DA "C5'" C N N 43 DA "C4'" C N R 44 DA "O4'" O N N 45 DA "C3'" C N S 46 DA "O3'" O N N 47 DA "C2'" C N N 48 DA "C1'" C N R 49 DA N9 N Y N 50 DA C8 C Y N 51 DA N7 N Y N 52 DA C5 C Y N 53 DA C6 C Y N 54 DA N6 N N N 55 DA N1 N Y N 56 DA C2 C Y N 57 DA N3 N Y N 58 DA C4 C Y N 59 DA HOP3 H N N 60 DA HOP2 H N N 61 DA "H5'" H N N 62 DA "H5''" H N N 63 DA "H4'" H N N 64 DA "H3'" H N N 65 DA "HO3'" H N N 66 DA "H2'" H N N 67 DA "H2''" H N N 68 DA "H1'" H N N 69 DA H8 H N N 70 DA H61 H N N 71 DA H62 H N N 72 DA H2 H N N 73 DG OP3 O N N 74 DG P P N N 75 DG OP1 O N N 76 DG OP2 O N N 77 DG "O5'" O N N 78 DG "C5'" C N N 79 DG "C4'" C N R 80 DG "O4'" O N N 81 DG "C3'" C N S 82 DG "O3'" O N N 83 DG "C2'" C N N 84 DG "C1'" C N R 85 DG N9 N Y N 86 DG C8 C Y N 87 DG N7 N Y N 88 DG C5 C Y N 89 DG C6 C N N 90 DG O6 O N N 91 DG N1 N N N 92 DG C2 C N N 93 DG N2 N N N 94 DG N3 N N N 95 DG C4 C Y N 96 DG HOP3 H N N 97 DG HOP2 H N N 98 DG "H5'" H N N 99 DG "H5''" H N N 100 DG "H4'" H N N 101 DG "H3'" H N N 102 DG "HO3'" H N N 103 DG "H2'" H N N 104 DG "H2''" H N N 105 DG "H1'" H N N 106 DG H8 H N N 107 DG H1 H N N 108 DG H21 H N N 109 DG H22 H N N 110 DT OP3 O N N 111 DT P P N N 112 DT OP1 O N N 113 DT OP2 O N N 114 DT "O5'" O N N 115 DT "C5'" C N N 116 DT "C4'" C N R 117 DT "O4'" O N N 118 DT "C3'" C N S 119 DT "O3'" O N N 120 DT "C2'" C N N 121 DT "C1'" C N R 122 DT N1 N N N 123 DT C2 C N N 124 DT O2 O N N 125 DT N3 N N N 126 DT C4 C N N 127 DT O4 O N N 128 DT C5 C N N 129 DT C7 C N N 130 DT C6 C N N 131 DT HOP3 H N N 132 DT HOP2 H N N 133 DT "H5'" H N N 134 DT "H5''" H N N 135 DT "H4'" H N N 136 DT "H3'" H N N 137 DT "HO3'" H N N 138 DT "H2'" H N N 139 DT "H2''" H N N 140 DT "H1'" H N N 141 DT H3 H N N 142 DT H71 H N N 143 DT H72 H N N 144 DT H73 H N N 145 DT H6 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BGM P OP1 doub N N 1 BGM P OP2 sing N N 2 BGM P "O5'" sing N N 3 BGM P OP3 sing N N 4 BGM OP2 HOP2 sing N N 5 BGM "O5'" "C5'" sing N N 6 BGM "C5'" "C4'" sing N N 7 BGM "C5'" "H5'" sing N N 8 BGM "C5'" "H5''" sing N N 9 BGM "C4'" "O4'" sing N N 10 BGM "C4'" "C3'" sing N N 11 BGM "C4'" "H4'" sing N N 12 BGM "O4'" "C1'" sing N N 13 BGM "C1'" N9 sing N N 14 BGM "C1'" "C2'" sing N N 15 BGM "C1'" "H1'" sing N N 16 BGM N9 C8 sing Y N 17 BGM N9 C4 sing Y N 18 BGM C8 N7 doub Y N 19 BGM C8 BR sing N N 20 BGM N7 C5 sing Y N 21 BGM C5 C4 doub Y N 22 BGM C5 C6 sing N N 23 BGM C4 N3 sing N N 24 BGM N3 C2 doub N N 25 BGM C2 N2 sing N N 26 BGM C2 N1 sing N N 27 BGM N2 H21 sing N N 28 BGM N2 H22 sing N N 29 BGM N1 C6 sing N N 30 BGM N1 H1 sing N N 31 BGM C6 O6 doub N N 32 BGM "C2'" "C3'" sing N N 33 BGM "C2'" "H2'" sing N N 34 BGM "C2'" "H2''" sing N N 35 BGM "C3'" "O3'" sing N N 36 BGM "C3'" "H3'" sing N N 37 BGM "O3'" "HO3'" sing N N 38 BGM OP3 HOP3 sing N N 39 DA OP3 P sing N N 40 DA OP3 HOP3 sing N N 41 DA P OP1 doub N N 42 DA P OP2 sing N N 43 DA P "O5'" sing N N 44 DA OP2 HOP2 sing N N 45 DA "O5'" "C5'" sing N N 46 DA "C5'" "C4'" sing N N 47 DA "C5'" "H5'" sing N N 48 DA "C5'" "H5''" sing N N 49 DA "C4'" "O4'" sing N N 50 DA "C4'" "C3'" sing N N 51 DA "C4'" "H4'" sing N N 52 DA "O4'" "C1'" sing N N 53 DA "C3'" "O3'" sing N N 54 DA "C3'" "C2'" sing N N 55 DA "C3'" "H3'" sing N N 56 DA "O3'" "HO3'" sing N N 57 DA "C2'" "C1'" sing N N 58 DA "C2'" "H2'" sing N N 59 DA "C2'" "H2''" sing N N 60 DA "C1'" N9 sing N N 61 DA "C1'" "H1'" sing N N 62 DA N9 C8 sing Y N 63 DA N9 C4 sing Y N 64 DA C8 N7 doub Y N 65 DA C8 H8 sing N N 66 DA N7 C5 sing Y N 67 DA C5 C6 sing Y N 68 DA C5 C4 doub Y N 69 DA C6 N6 sing N N 70 DA C6 N1 doub Y N 71 DA N6 H61 sing N N 72 DA N6 H62 sing N N 73 DA N1 C2 sing Y N 74 DA C2 N3 doub Y N 75 DA C2 H2 sing N N 76 DA N3 C4 sing Y N 77 DG OP3 P sing N N 78 DG OP3 HOP3 sing N N 79 DG P OP1 doub N N 80 DG P OP2 sing N N 81 DG P "O5'" sing N N 82 DG OP2 HOP2 sing N N 83 DG "O5'" "C5'" sing N N 84 DG "C5'" "C4'" sing N N 85 DG "C5'" "H5'" sing N N 86 DG "C5'" "H5''" sing N N 87 DG "C4'" "O4'" sing N N 88 DG "C4'" "C3'" sing N N 89 DG "C4'" "H4'" sing N N 90 DG "O4'" "C1'" sing N N 91 DG "C3'" "O3'" sing N N 92 DG "C3'" "C2'" sing N N 93 DG "C3'" "H3'" sing N N 94 DG "O3'" "HO3'" sing N N 95 DG "C2'" "C1'" sing N N 96 DG "C2'" "H2'" sing N N 97 DG "C2'" "H2''" sing N N 98 DG "C1'" N9 sing N N 99 DG "C1'" "H1'" sing N N 100 DG N9 C8 sing Y N 101 DG N9 C4 sing Y N 102 DG C8 N7 doub Y N 103 DG C8 H8 sing N N 104 DG N7 C5 sing Y N 105 DG C5 C6 sing N N 106 DG C5 C4 doub Y N 107 DG C6 O6 doub N N 108 DG C6 N1 sing N N 109 DG N1 C2 sing N N 110 DG N1 H1 sing N N 111 DG C2 N2 sing N N 112 DG C2 N3 doub N N 113 DG N2 H21 sing N N 114 DG N2 H22 sing N N 115 DG N3 C4 sing N N 116 DT OP3 P sing N N 117 DT OP3 HOP3 sing N N 118 DT P OP1 doub N N 119 DT P OP2 sing N N 120 DT P "O5'" sing N N 121 DT OP2 HOP2 sing N N 122 DT "O5'" "C5'" sing N N 123 DT "C5'" "C4'" sing N N 124 DT "C5'" "H5'" sing N N 125 DT "C5'" "H5''" sing N N 126 DT "C4'" "O4'" sing N N 127 DT "C4'" "C3'" sing N N 128 DT "C4'" "H4'" sing N N 129 DT "O4'" "C1'" sing N N 130 DT "C3'" "O3'" sing N N 131 DT "C3'" "C2'" sing N N 132 DT "C3'" "H3'" sing N N 133 DT "O3'" "HO3'" sing N N 134 DT "C2'" "C1'" sing N N 135 DT "C2'" "H2'" sing N N 136 DT "C2'" "H2''" sing N N 137 DT "C1'" N1 sing N N 138 DT "C1'" "H1'" sing N N 139 DT N1 C2 sing N N 140 DT N1 C6 sing N N 141 DT C2 O2 doub N N 142 DT C2 N3 sing N N 143 DT N3 C4 sing N N 144 DT N3 H3 sing N N 145 DT C4 O4 doub N N 146 DT C4 C5 sing N N 147 DT C5 C7 sing N N 148 DT C5 C6 doub N N 149 DT C7 H71 sing N N 150 DT C7 H72 sing N N 151 DT C7 H73 sing N N 152 DT C6 H6 sing N N 153 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6ERL 'double helix' 6ERL 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A BGM 13 1_555 A BGM 17 1_555 -1.906 -3.308 -0.089 7.765 -3.718 90.641 1 A_BGM13:BGM17_A A 13 ? A 17 ? 6 3 1 A DG 14 1_555 A DG 18 1_555 1.700 3.358 0.115 -4.036 -15.726 -90.457 2 A_DG14:DG18_A A 14 ? A 18 ? 6 3 1 A DG 15 1_555 A DG 19 1_555 1.662 3.301 0.045 -5.414 9.681 -93.538 3 A_DG15:DG19_A A 15 ? A 19 ? 6 3 1 A DA 22 1_555 A DT 20 1_555 1.103 -3.895 1.300 -25.252 32.931 77.811 4 A_DA22:DT20_A A 22 ? A 20 ? 23 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A BGM 13 1_555 A BGM 17 1_555 A DG 14 1_555 A DG 18 1_555 -1.546 -3.613 -0.875 77.766 -152.662 142.635 -1.873 0.740 -0.025 -76.534 -38.987 177.225 1 AA_BGM13DG14:DG18BGM17_AA A 13 ? A 17 ? A 14 ? A 18 ? 1 A DG 14 1_555 A DG 18 1_555 A DG 15 1_555 A DG 19 1_555 -1.517 -0.849 3.684 1.004 1.933 28.460 -2.210 3.331 3.565 3.924 -2.038 28.541 2 AA_DG14DG15:DG19DG18_AA A 14 ? A 18 ? A 15 ? A 19 ? 1 A DG 15 1_555 A DG 19 1_555 A DA 22 1_555 A DT 20 1_555 1.894 -1.117 2.865 -1.344 3.852 119.238 -0.680 -1.109 2.829 2.232 0.779 119.280 3 AA_DG15DA22:DT20DG19_AA A 15 ? A 19 ? A 22 ? A 20 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6ERL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C H N O P # loop_