data_6ES3 # _entry.id 6ES3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ES3 pdb_00006es3 10.2210/pdb6es3/pdb WWPDB D_1200007171 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-21 2 'Structure model' 1 1 2018-05-16 3 'Structure model' 1 2 2019-12-25 4 'Structure model' 1 3 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' reflns_shell 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model 8 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_reflns_shell.percent_possible_all' 11 4 'Structure model' '_database_2.pdbx_DOI' 12 4 'Structure model' '_database_2.pdbx_database_accession' 13 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 14 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 15 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 16 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 17 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 18 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 19 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 20 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ES3 _pdbx_database_status.recvd_initial_deposition_date 2017-10-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Morgunova, E.' 1 ? 'Yin, Y.' 2 ? 'Jolma, A.' 3 ? 'Popov, A.' 4 ? 'Taipale, J.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.32963 _citation.pdbx_database_id_PubMed 29638214 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morgunova, E.' 1 ? primary 'Yin, Y.' 2 ? primary 'Das, P.K.' 3 ? primary 'Jolma, A.' 4 ? primary 'Zhu, F.' 5 ? primary 'Popov, A.' 6 ? primary 'Xu, Y.' 7 ? primary 'Nilsson, L.' 8 ? primary 'Taipale, J.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*CP*CP*TP*CP*C)-3') ; 5448.524 2 ? ? ? ? 2 polymer man 'Homeobox protein CDX-2' 9026.421 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*GP*AP*GP*GP*TP*CP*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') ; 5582.657 2 ? ? ? ? 4 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'CDX-3,Caudal-type homeobox protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DT)(DG)(DT)(DT)(DT)(DT)(DA)(DC)(DG)(DA)(DC)(DC)(DT)(DC)(DC)' TTGTGTTTTACGACCTCC A,B ? 2 'polypeptide(L)' no no RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ K,M ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DG)(DG)(DT)(DC)(DG)(DT)(DA)(DA)(DA)(DA)(DC)(DA)(DC)(DA)(DA)' GGAGGTCGTAAAACACAA F,E ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DT n 1 10 DA n 1 11 DC n 1 12 DG n 1 13 DA n 1 14 DC n 1 15 DC n 1 16 DT n 1 17 DC n 1 18 DC n 2 1 ARG n 2 2 THR n 2 3 LYS n 2 4 ASP n 2 5 LYS n 2 6 TYR n 2 7 ARG n 2 8 VAL n 2 9 VAL n 2 10 TYR n 2 11 THR n 2 12 ASP n 2 13 HIS n 2 14 GLN n 2 15 ARG n 2 16 LEU n 2 17 GLU n 2 18 LEU n 2 19 GLU n 2 20 LYS n 2 21 GLU n 2 22 PHE n 2 23 HIS n 2 24 TYR n 2 25 SER n 2 26 ARG n 2 27 TYR n 2 28 ILE n 2 29 THR n 2 30 ILE n 2 31 ARG n 2 32 ARG n 2 33 LYS n 2 34 ALA n 2 35 GLU n 2 36 LEU n 2 37 ALA n 2 38 ALA n 2 39 THR n 2 40 LEU n 2 41 GLY n 2 42 LEU n 2 43 SER n 2 44 GLU n 2 45 ARG n 2 46 GLN n 2 47 VAL n 2 48 LYS n 2 49 ILE n 2 50 TRP n 2 51 PHE n 2 52 GLN n 2 53 ASN n 2 54 ARG n 2 55 ARG n 2 56 ALA n 2 57 LYS n 2 58 GLU n 2 59 ARG n 2 60 LYS n 2 61 ILE n 2 62 ASN n 2 63 LYS n 2 64 LYS n 2 65 LYS n 2 66 LEU n 2 67 GLN n 2 68 GLN n 2 69 GLN n 2 70 GLN n 2 71 GLN n 2 72 GLN n 3 1 DG n 3 2 DG n 3 3 DA n 3 4 DG n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DG n 3 9 DT n 3 10 DA n 3 11 DA n 3 12 DA n 3 13 DA n 3 14 DC n 3 15 DA n 3 16 DC n 3 17 DA n 3 18 DA n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 72 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CDX2, CDX3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETG20A-SBP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 18 'Homo sapiens' ? 9606 ? 3 1 sample 1 18 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DA 10 10 10 DA DA A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DC 14 14 14 DC DC A . n A 1 15 DC 15 15 15 DC DC A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DC 17 17 17 DC DC A . n A 1 18 DC 18 18 18 DC DC A . n B 1 1 DT 1 1 1 DT DT B . n B 1 2 DT 2 2 2 DT DT B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DT 6 6 6 DT DT B . n B 1 7 DT 7 7 7 DT DT B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DT 9 9 9 DT DT B . n B 1 10 DA 10 10 10 DA DA B . n B 1 11 DC 11 11 11 DC DC B . n B 1 12 DG 12 12 12 DG DG B . n B 1 13 DA 13 13 13 DA DA B . n B 1 14 DC 14 14 14 DC DC B . n B 1 15 DC 15 15 15 DC DC B . n B 1 16 DT 16 16 16 DT DT B . n B 1 17 DC 17 17 17 DC DC B . n B 1 18 DC 18 18 18 DC DC B . n C 2 1 ARG 1 184 184 ARG ARG K . n C 2 2 THR 2 185 185 THR THR K . n C 2 3 LYS 3 186 186 LYS LYS K . n C 2 4 ASP 4 187 187 ASP ASP K . n C 2 5 LYS 5 188 188 LYS LYS K . n C 2 6 TYR 6 189 189 TYR TYR K . n C 2 7 ARG 7 190 190 ARG ARG K . n C 2 8 VAL 8 191 191 VAL VAL K . n C 2 9 VAL 9 192 192 VAL VAL K . n C 2 10 TYR 10 193 193 TYR TYR K . n C 2 11 THR 11 194 194 THR THR K . n C 2 12 ASP 12 195 195 ASP ASP K . n C 2 13 HIS 13 196 196 HIS HIS K . n C 2 14 GLN 14 197 197 GLN GLN K . n C 2 15 ARG 15 198 198 ARG ARG K . n C 2 16 LEU 16 199 199 LEU LEU K . n C 2 17 GLU 17 200 200 GLU GLU K . n C 2 18 LEU 18 201 201 LEU LEU K . n C 2 19 GLU 19 202 202 GLU GLU K . n C 2 20 LYS 20 203 203 LYS LYS K . n C 2 21 GLU 21 204 204 GLU GLU K . n C 2 22 PHE 22 205 205 PHE PHE K . n C 2 23 HIS 23 206 206 HIS HIS K . n C 2 24 TYR 24 207 207 TYR TYR K . n C 2 25 SER 25 208 208 SER SER K . n C 2 26 ARG 26 209 209 ARG ARG K . n C 2 27 TYR 27 210 210 TYR TYR K . n C 2 28 ILE 28 211 211 ILE ILE K . n C 2 29 THR 29 212 212 THR THR K . n C 2 30 ILE 30 213 213 ILE ILE K . n C 2 31 ARG 31 214 214 ARG ARG K . n C 2 32 ARG 32 215 215 ARG ARG K . n C 2 33 LYS 33 216 216 LYS LYS K . n C 2 34 ALA 34 217 217 ALA ALA K . n C 2 35 GLU 35 218 218 GLU GLU K . n C 2 36 LEU 36 219 219 LEU LEU K . n C 2 37 ALA 37 220 220 ALA ALA K . n C 2 38 ALA 38 221 221 ALA ALA K . n C 2 39 THR 39 222 222 THR THR K . n C 2 40 LEU 40 223 223 LEU LEU K . n C 2 41 GLY 41 224 224 GLY GLY K . n C 2 42 LEU 42 225 225 LEU LEU K . n C 2 43 SER 43 226 226 SER SER K . n C 2 44 GLU 44 227 227 GLU GLU K . n C 2 45 ARG 45 228 228 ARG ARG K . n C 2 46 GLN 46 229 229 GLN GLN K . n C 2 47 VAL 47 230 230 VAL VAL K . n C 2 48 LYS 48 231 231 LYS LYS K . n C 2 49 ILE 49 232 232 ILE ILE K . n C 2 50 TRP 50 233 233 TRP TRP K . n C 2 51 PHE 51 234 234 PHE PHE K . n C 2 52 GLN 52 235 235 GLN GLN K . n C 2 53 ASN 53 236 236 ASN ASN K . n C 2 54 ARG 54 237 237 ARG ARG K . n C 2 55 ARG 55 238 238 ARG ARG K . n C 2 56 ALA 56 239 239 ALA ALA K . n C 2 57 LYS 57 240 240 LYS LYS K . n C 2 58 GLU 58 241 241 GLU GLU K . n C 2 59 ARG 59 242 242 ARG ARG K . n C 2 60 LYS 60 243 243 LYS LYS K . n C 2 61 ILE 61 244 244 ILE ILE K . n C 2 62 ASN 62 245 245 ASN ASN K . n C 2 63 LYS 63 246 246 LYS LYS K . n C 2 64 LYS 64 247 247 LYS LYS K . n C 2 65 LYS 65 248 248 LYS LYS K . n C 2 66 LEU 66 249 249 LEU LEU K . n C 2 67 GLN 67 250 250 GLN GLN K . n C 2 68 GLN 68 251 251 GLN GLN K . n C 2 69 GLN 69 252 252 GLN GLN K . n C 2 70 GLN 70 253 253 GLN GLN K . n C 2 71 GLN 71 254 254 GLN GLN K . n C 2 72 GLN 72 255 255 GLN GLN K . n D 2 1 ARG 1 184 184 ARG ARG M . n D 2 2 THR 2 185 185 THR THR M . n D 2 3 LYS 3 186 186 LYS LYS M . n D 2 4 ASP 4 187 187 ASP ASP M . n D 2 5 LYS 5 188 188 LYS LYS M . n D 2 6 TYR 6 189 189 TYR TYR M . n D 2 7 ARG 7 190 190 ARG ARG M . n D 2 8 VAL 8 191 191 VAL VAL M . n D 2 9 VAL 9 192 192 VAL VAL M . n D 2 10 TYR 10 193 193 TYR TYR M . n D 2 11 THR 11 194 194 THR THR M . n D 2 12 ASP 12 195 195 ASP ASP M . n D 2 13 HIS 13 196 196 HIS HIS M . n D 2 14 GLN 14 197 197 GLN GLN M . n D 2 15 ARG 15 198 198 ARG ARG M . n D 2 16 LEU 16 199 199 LEU LEU M . n D 2 17 GLU 17 200 200 GLU GLU M . n D 2 18 LEU 18 201 201 LEU LEU M . n D 2 19 GLU 19 202 202 GLU GLU M . n D 2 20 LYS 20 203 203 LYS LYS M . n D 2 21 GLU 21 204 204 GLU GLU M . n D 2 22 PHE 22 205 205 PHE PHE M . n D 2 23 HIS 23 206 206 HIS HIS M . n D 2 24 TYR 24 207 207 TYR TYR M . n D 2 25 SER 25 208 208 SER SER M . n D 2 26 ARG 26 209 209 ARG ARG M . n D 2 27 TYR 27 210 210 TYR TYR M . n D 2 28 ILE 28 211 211 ILE ILE M . n D 2 29 THR 29 212 212 THR THR M . n D 2 30 ILE 30 213 213 ILE ILE M . n D 2 31 ARG 31 214 214 ARG ARG M . n D 2 32 ARG 32 215 215 ARG ARG M . n D 2 33 LYS 33 216 216 LYS LYS M . n D 2 34 ALA 34 217 217 ALA ALA M . n D 2 35 GLU 35 218 218 GLU GLU M . n D 2 36 LEU 36 219 219 LEU LEU M . n D 2 37 ALA 37 220 220 ALA ALA M . n D 2 38 ALA 38 221 221 ALA ALA M . n D 2 39 THR 39 222 222 THR THR M . n D 2 40 LEU 40 223 223 LEU LEU M . n D 2 41 GLY 41 224 224 GLY GLY M . n D 2 42 LEU 42 225 225 LEU LEU M . n D 2 43 SER 43 226 226 SER SER M . n D 2 44 GLU 44 227 227 GLU GLU M . n D 2 45 ARG 45 228 228 ARG ARG M . n D 2 46 GLN 46 229 229 GLN GLN M . n D 2 47 VAL 47 230 230 VAL VAL M . n D 2 48 LYS 48 231 231 LYS LYS M . n D 2 49 ILE 49 232 232 ILE ILE M . n D 2 50 TRP 50 233 233 TRP TRP M . n D 2 51 PHE 51 234 234 PHE PHE M . n D 2 52 GLN 52 235 235 GLN GLN M . n D 2 53 ASN 53 236 236 ASN ASN M . n D 2 54 ARG 54 237 237 ARG ARG M . n D 2 55 ARG 55 238 238 ARG ARG M . n D 2 56 ALA 56 239 239 ALA ALA M . n D 2 57 LYS 57 240 240 LYS LYS M . n D 2 58 GLU 58 241 241 GLU GLU M . n D 2 59 ARG 59 242 242 ARG ARG M . n D 2 60 LYS 60 243 243 LYS LYS M . n D 2 61 ILE 61 244 244 ILE ILE M . n D 2 62 ASN 62 245 245 ASN ASN M . n D 2 63 LYS 63 246 246 LYS LYS M . n D 2 64 LYS 64 247 247 LYS LYS M . n D 2 65 LYS 65 248 248 LYS LYS M . n D 2 66 LEU 66 249 249 LEU LEU M . n D 2 67 GLN 67 250 250 GLN GLN M . n D 2 68 GLN 68 251 251 GLN GLN M . n D 2 69 GLN 69 252 252 GLN GLN M . n D 2 70 GLN 70 253 253 GLN GLN M . n D 2 71 GLN 71 254 254 GLN GLN M . n D 2 72 GLN 72 255 255 GLN GLN M . n E 3 1 DG 1 19 19 DG DG F . n E 3 2 DG 2 20 20 DG DG F . n E 3 3 DA 3 21 21 DA DA F . n E 3 4 DG 4 22 22 DG DG F . n E 3 5 DG 5 23 23 DG DG F . n E 3 6 DT 6 24 24 DT DT F . n E 3 7 DC 7 25 25 DC DC F . n E 3 8 DG 8 26 26 DG DG F . n E 3 9 DT 9 27 27 DT DT F . n E 3 10 DA 10 28 28 DA DA F . n E 3 11 DA 11 29 29 DA DA F . n E 3 12 DA 12 30 30 DA DA F . n E 3 13 DA 13 31 31 DA DA F . n E 3 14 DC 14 32 32 DC DC F . n E 3 15 DA 15 33 33 DA DA F . n E 3 16 DC 16 34 34 DC DC F . n E 3 17 DA 17 35 35 DA DA F . n E 3 18 DA 18 36 36 DA DA F . n F 3 1 DG 1 19 19 DG DG E . n F 3 2 DG 2 20 20 DG DG E . n F 3 3 DA 3 21 21 DA DA E . n F 3 4 DG 4 22 22 DG DG E . n F 3 5 DG 5 23 23 DG DG E . n F 3 6 DT 6 24 24 DT DT E . n F 3 7 DC 7 25 25 DC DC E . n F 3 8 DG 8 26 26 DG DG E . n F 3 9 DT 9 27 27 DT DT E . n F 3 10 DA 10 28 28 DA DA E . n F 3 11 DA 11 29 29 DA DA E . n F 3 12 DA 12 30 30 DA DA E . n F 3 13 DA 13 31 31 DA DA E . n F 3 14 DC 14 32 32 DC DC E . n F 3 15 DA 15 33 33 DA DA E . n F 3 16 DC 16 34 34 DC DC E . n F 3 17 DA 17 35 35 DA DA E . n F 3 18 DA 18 36 36 DA DA E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 HOH 1 101 31 HOH HOH A . G 4 HOH 2 102 17 HOH HOH A . G 4 HOH 3 103 32 HOH HOH A . G 4 HOH 4 104 29 HOH HOH A . G 4 HOH 5 105 16 HOH HOH A . G 4 HOH 6 106 28 HOH HOH A . G 4 HOH 7 107 21 HOH HOH A . G 4 HOH 8 108 28 HOH HOH A . G 4 HOH 9 109 37 HOH HOH A . H 4 HOH 1 101 2 HOH HOH B . H 4 HOH 2 102 7 HOH HOH B . H 4 HOH 3 103 15 HOH HOH B . H 4 HOH 4 104 6 HOH HOH B . H 4 HOH 5 105 36 HOH HOH B . H 4 HOH 6 106 42 HOH HOH B . H 4 HOH 7 107 27 HOH HOH B . H 4 HOH 8 108 20 HOH HOH B . H 4 HOH 9 109 1 HOH HOH B . H 4 HOH 10 110 43 HOH HOH B . I 4 HOH 1 301 19 HOH HOH K . I 4 HOH 2 302 9 HOH HOH K . I 4 HOH 3 303 5 HOH HOH K . I 4 HOH 4 304 7 HOH HOH K . I 4 HOH 5 305 20 HOH HOH K . I 4 HOH 6 306 2 HOH HOH K . I 4 HOH 7 307 10 HOH HOH K . I 4 HOH 8 308 9 HOH HOH K . I 4 HOH 9 309 31 HOH HOH K . I 4 HOH 10 310 25 HOH HOH K . I 4 HOH 11 311 39 HOH HOH K . I 4 HOH 12 312 30 HOH HOH K . I 4 HOH 13 313 3 HOH HOH K . I 4 HOH 14 314 9 HOH HOH K . I 4 HOH 15 315 12 HOH HOH K . I 4 HOH 16 316 34 HOH HOH K . I 4 HOH 17 317 41 HOH HOH K . I 4 HOH 18 318 11 HOH HOH K . I 4 HOH 19 319 5 HOH HOH K . I 4 HOH 20 320 11 HOH HOH K . I 4 HOH 21 321 18 HOH HOH K . I 4 HOH 22 322 32 HOH HOH K . I 4 HOH 23 323 10 HOH HOH K . I 4 HOH 24 324 6 HOH HOH K . I 4 HOH 25 325 33 HOH HOH K . I 4 HOH 26 326 18 HOH HOH K . J 4 HOH 1 301 11 HOH HOH M . J 4 HOH 2 302 18 HOH HOH M . J 4 HOH 3 303 17 HOH HOH M . J 4 HOH 4 304 5 HOH HOH M . J 4 HOH 5 305 14 HOH HOH M . J 4 HOH 6 306 26 HOH HOH M . J 4 HOH 7 307 19 HOH HOH M . J 4 HOH 8 308 29 HOH HOH M . J 4 HOH 9 309 24 HOH HOH M . J 4 HOH 10 310 15 HOH HOH M . J 4 HOH 11 311 26 HOH HOH M . J 4 HOH 12 312 16 HOH HOH M . J 4 HOH 13 313 22 HOH HOH M . J 4 HOH 14 314 8 HOH HOH M . J 4 HOH 15 315 16 HOH HOH M . J 4 HOH 16 316 15 HOH HOH M . J 4 HOH 17 317 35 HOH HOH M . J 4 HOH 18 318 33 HOH HOH M . J 4 HOH 19 319 13 HOH HOH M . J 4 HOH 20 320 36 HOH HOH M . J 4 HOH 21 321 25 HOH HOH M . J 4 HOH 22 322 4 HOH HOH M . J 4 HOH 23 323 19 HOH HOH M . J 4 HOH 24 324 14 HOH HOH M . J 4 HOH 25 325 8 HOH HOH M . J 4 HOH 26 326 12 HOH HOH M . J 4 HOH 27 327 12 HOH HOH M . J 4 HOH 28 328 13 HOH HOH M . J 4 HOH 29 329 38 HOH HOH M . K 4 HOH 1 101 10 HOH HOH F . K 4 HOH 2 102 8 HOH HOH F . K 4 HOH 3 103 14 HOH HOH F . K 4 HOH 4 104 13 HOH HOH F . K 4 HOH 5 105 21 HOH HOH F . K 4 HOH 6 106 30 HOH HOH F . K 4 HOH 7 107 1 HOH HOH F . K 4 HOH 8 108 40 HOH HOH F . K 4 HOH 9 109 22 HOH HOH F . K 4 HOH 10 110 23 HOH HOH F . L 4 HOH 1 101 4 HOH HOH E . L 4 HOH 2 102 4 HOH HOH E . L 4 HOH 3 103 6 HOH HOH E . L 4 HOH 4 104 3 HOH HOH E . L 4 HOH 5 105 2 HOH HOH E . L 4 HOH 6 106 24 HOH HOH E . L 4 HOH 7 107 34 HOH HOH E . L 4 HOH 8 108 1 HOH HOH E . L 4 HOH 9 109 3 HOH HOH E . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 113.270 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6ES3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 127.950 _cell.length_a_esd ? _cell.length_b 46.490 _cell.length_b_esd ? _cell.length_c 68.890 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ES3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ES3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '19% PME 5000, 0.15 M potassium chloride, 0.1 M magnesium chloride, 8% PEG 400, 0.05M TRIS-buffer pH 8.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-04-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9724 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 65.834 _reflns.entry_id 6ES3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.180 _reflns.d_resolution_low 43.230 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19575 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 99.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.093 _reflns.pdbx_Rmerge_I_obs 0.185 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.470 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.191 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.191 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.180 2.240 ? 0.430 ? ? ? ? 1388 97.800 ? ? ? ? 2.991 ? ? ? ? ? ? ? ? 6.019 ? ? ? ? 3.273 ? ? 1 1 0.107 ? 2.240 2.300 ? 0.690 ? ? ? ? 1415 99.600 ? ? ? ? 2.202 ? ? ? ? ? ? ? ? 6.896 ? ? ? ? 2.383 ? ? 2 1 0.371 ? 2.300 2.370 ? 0.790 ? ? ? ? 1364 100.000 ? ? ? ? 1.966 ? ? ? ? ? ? ? ? 7.249 ? ? ? ? 2.118 ? ? 3 1 0.508 ? 2.370 2.440 ? 1.110 ? ? ? ? 1325 99.800 ? ? ? ? 2.317 ? ? ? ? ? ? ? ? 12.051 ? ? ? ? 2.417 ? ? 4 1 0.601 ? 2.440 2.520 ? 1.480 ? ? ? ? 1287 99.600 ? ? ? ? 2.544 ? ? ? ? ? ? ? ? 15.301 ? ? ? ? 2.630 ? ? 5 1 0.662 ? 2.520 2.610 ? 2.060 ? ? ? ? 1237 100 ? ? ? ? 1.949 ? ? ? ? ? ? ? ? 18.212 ? ? ? ? 2.005 ? ? 6 1 0.808 ? 2.610 2.710 ? 2.770 ? ? ? ? 1204 99.600 ? ? ? ? 1.555 ? ? ? ? ? ? ? ? 20.443 ? ? ? ? 1.595 ? ? 7 1 0.846 ? 2.710 2.820 ? 3.520 ? ? ? ? 1139 99.900 ? ? ? ? 1.207 ? ? ? ? ? ? ? ? 20.103 ? ? ? ? 1.238 ? ? 8 1 0.889 ? 2.820 2.940 ? 4.990 ? ? ? ? 1129 100 ? ? ? ? 0.800 ? ? ? ? ? ? ? ? 20.511 ? ? ? ? 0.821 ? ? 9 1 0.957 ? 2.940 3.090 ? 6.990 ? ? ? ? 1060 99.300 ? ? ? ? 0.497 ? ? ? ? ? ? ? ? 19.966 ? ? ? ? 0.510 ? ? 10 1 0.983 ? 3.090 3.250 ? 11.130 ? ? ? ? 1010 100.000 ? ? ? ? 0.220 ? ? ? ? ? ? ? ? 19.881 ? ? ? ? 0.226 ? ? 11 1 0.998 ? 3.250 3.450 ? 14.310 ? ? ? ? 956 99.500 ? ? ? ? 0.174 ? ? ? ? ? ? ? ? 19.611 ? ? ? ? 0.179 ? ? 12 1 0.997 ? 3.450 3.690 ? 16.770 ? ? ? ? 895 99.900 ? ? ? ? 0.179 ? ? ? ? ? ? ? ? 20.055 ? ? ? ? 0.184 ? ? 13 1 0.996 ? 3.690 3.990 ? 19.240 ? ? ? ? 852 100.000 ? ? ? ? 0.167 ? ? ? ? ? ? ? ? 19.568 ? ? ? ? 0.172 ? ? 14 1 0.995 ? 3.990 4.370 ? 21.420 ? ? ? ? 778 99.600 ? ? ? ? 0.143 ? ? ? ? ? ? ? ? 19.203 ? ? ? ? 0.147 ? ? 15 1 0.997 ? 4.370 4.880 ? 24.100 ? ? ? ? 711 99.600 ? ? ? ? 0.131 ? ? ? ? ? ? ? ? 19.781 ? ? ? ? 0.135 ? ? 16 1 0.997 ? 4.880 5.640 ? 24.470 ? ? ? ? 626 99.400 ? ? ? ? 0.126 ? ? ? ? ? ? ? ? 19.562 ? ? ? ? 0.130 ? ? 17 1 0.996 ? 5.640 6.900 ? 24.420 ? ? ? ? 540 99.800 ? ? ? ? 0.119 ? ? ? ? ? ? ? ? 18.335 ? ? ? ? 0.123 ? ? 18 1 0.997 ? 6.900 9.760 ? 27.240 ? ? ? ? 416 99.000 ? ? ? ? 0.087 ? ? ? ? ? ? ? ? 19.623 ? ? ? ? 0.090 ? ? 19 1 0.999 ? 9.760 43.230 ? 28.250 ? ? ? ? 243 98.800 ? ? ? ? 0.084 ? ? ? ? ? ? ? ? 17.424 ? ? ? ? 0.087 ? ? 20 1 0.998 ? # _refine.aniso_B[1][1] 7.1500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 2.1000 _refine.aniso_B[2][2] -8.0400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.6600 _refine.B_iso_max 183.040 _refine.B_iso_mean 67.0570 _refine.B_iso_min 37.370 _refine.correlation_coeff_Fo_to_Fc 0.9530 _refine.correlation_coeff_Fo_to_Fc_free 0.9130 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ES3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5700 _refine.ls_d_res_low 43.2300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10891 _refine.ls_number_reflns_R_free 1210 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9500 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2221 _refine.ls_R_factor_R_free 0.2781 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2161 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5LTY _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.3780 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 31.8150 _refine.overall_SU_ML 0.3190 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5700 _refine_hist.d_res_low 43.2300 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 2841 _refine_hist.pdbx_number_residues_total 216 _refine_hist.pdbx_B_iso_mean_solvent 67.40 _refine_hist.pdbx_number_atoms_protein 1272 _refine_hist.pdbx_number_atoms_nucleic_acid 1476 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 0.014 3030 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 2076 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.053 1.487 4254 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.558 3.000 4848 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 19.438 6.323 532 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.432 22.432 74 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.448 15.000 273 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.958 15.000 19 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.183 0.247 464 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.013 0.020 2242 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 646 ? r_gen_planes_other ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'X-RAY DIFFRACTION' 1 1 'interatomic distance' A 3130 0.060 0.050 ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 2 'interatomic distance' B 3130 0.060 0.050 ? ? ? ? ? ? 3 'X-RAY DIFFRACTION' 2 1 'interatomic distance' K 4812 0.090 0.050 ? ? ? ? ? ? 4 'X-RAY DIFFRACTION' 2 2 'interatomic distance' M 4812 0.090 0.050 ? ? ? ? ? ? 5 'X-RAY DIFFRACTION' 3 1 'interatomic distance' F 3250 0.040 0.050 ? ? ? ? ? ? 6 'X-RAY DIFFRACTION' 3 2 'interatomic distance' E 3250 0.040 0.050 ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.5700 _refine_ls_shell.d_res_low 2.6370 _refine_ls_shell.number_reflns_all 898 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.number_reflns_R_work 808 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4190 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.4390 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 K 2 2 M 3 1 F 3 2 E # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A DT 1 . A DC 18 . A DT 1 A DC 18 0 ? 1 2 0 B DT 1 . B DC 18 . B DT 1 B DC 18 0 ? 2 1 0 C ARG 1 . C GLN 72 . K ARG 184 K GLN 255 0 ? 2 2 0 D ARG 1 . D GLN 72 . M ARG 184 M GLN 255 0 ? 3 1 0 E DG 1 . E DA 18 . F DG 19 F DA 36 0 ? 3 2 0 F DG 1 . F DA 18 . E DG 19 E DA 36 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 6ES3 _struct.title 'Structure of CDX2-DNA(TCG)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ES3 _struct_keywords.text 'homeodomain transcription factor, CDX2-DNA complex, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6ES3 6ES3 ? 1 ? 1 2 UNP CDX2_HUMAN Q99626 ? 2 RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ 184 3 PDB 6ES3 6ES3 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6ES3 A 1 ? 18 ? 6ES3 1 ? 18 ? 1 18 2 1 6ES3 B 1 ? 18 ? 6ES3 1 ? 18 ? 1 18 3 2 6ES3 K 1 ? 72 ? Q99626 184 ? 255 ? 184 255 4 2 6ES3 M 1 ? 72 ? Q99626 184 ? 255 ? 184 255 5 3 6ES3 F 1 ? 18 ? 6ES3 19 ? 36 ? 19 36 6 3 6ES3 E 1 ? 18 ? 6ES3 19 ? 36 ? 19 36 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3790 ? 1 MORE -22 ? 1 'SSA (A^2)' 11030 ? 2 'ABSA (A^2)' 3780 ? 2 MORE -25 ? 2 'SSA (A^2)' 11000 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G,I,K 2 1 B,D,F,H,J,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR C 11 ? SER C 25 ? THR K 194 SER K 208 1 ? 15 HELX_P HELX_P2 AA2 THR C 29 ? GLY C 41 ? THR K 212 GLY K 224 1 ? 13 HELX_P HELX_P3 AA3 SER C 43 ? GLN C 72 ? SER K 226 GLN K 255 1 ? 30 HELX_P HELX_P4 AA4 THR D 11 ? SER D 25 ? THR M 194 SER M 208 1 ? 15 HELX_P HELX_P5 AA5 THR D 29 ? GLY D 41 ? THR M 212 GLY M 224 1 ? 13 HELX_P HELX_P6 AA6 SER D 43 ? GLN D 72 ? SER M 226 GLN M 255 1 ? 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 E DA 18 N1 ? ? A DT 1 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 E DA 18 N6 ? ? A DT 1 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 E DA 17 N1 ? ? A DT 2 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 E DA 17 N6 ? ? A DT 2 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 E DC 16 N3 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 E DC 16 O2 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 E DC 16 N4 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 E DA 15 N1 ? ? A DT 4 F DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 E DA 15 N6 ? ? A DT 4 F DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 E DC 14 N3 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 E DC 14 O2 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 E DC 14 N4 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 E DA 13 N1 ? ? A DT 6 F DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 E DA 13 N6 ? ? A DT 6 F DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 E DA 12 N1 ? ? A DT 7 F DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 E DA 12 N6 ? ? A DT 7 F DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 N3 ? ? ? 1_555 E DA 11 N1 ? ? A DT 8 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 O4 ? ? ? 1_555 E DA 11 N6 ? ? A DT 8 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 N3 ? ? ? 1_555 E DA 10 N1 ? ? A DT 9 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 O4 ? ? ? 1_555 E DA 10 N6 ? ? A DT 9 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 10 N1 ? ? ? 1_555 E DT 9 N3 ? ? A DA 10 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 10 N6 ? ? ? 1_555 E DT 9 O4 ? ? A DA 10 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N3 ? ? ? 1_555 E DG 8 N1 ? ? A DC 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 N4 ? ? ? 1_555 E DG 8 O6 ? ? A DC 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 O2 ? ? ? 1_555 E DG 8 N2 ? ? A DC 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 N1 ? ? ? 1_555 E DC 7 N3 ? ? A DG 12 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N2 ? ? ? 1_555 E DC 7 O2 ? ? A DG 12 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 O6 ? ? ? 1_555 E DC 7 N4 ? ? A DG 12 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 13 N1 ? ? ? 1_555 E DT 6 N3 ? ? A DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N6 ? ? ? 1_555 E DT 6 O4 ? ? A DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 14 N3 ? ? ? 1_555 E DG 5 N1 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 14 N4 ? ? ? 1_555 E DG 5 O6 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 14 O2 ? ? ? 1_555 E DG 5 N2 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 N3 ? ? ? 1_555 E DG 4 N1 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 N4 ? ? ? 1_555 E DG 4 O6 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 O2 ? ? ? 1_555 E DG 4 N2 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 16 N3 ? ? ? 1_555 E DA 3 N1 ? ? A DT 16 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 16 O4 ? ? ? 1_555 E DA 3 N6 ? ? A DT 16 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N3 ? ? ? 1_555 E DG 2 N1 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 N4 ? ? ? 1_555 E DG 2 O6 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 O2 ? ? ? 1_555 E DG 2 N2 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 18 N3 ? ? ? 1_555 E DG 1 N1 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 18 N4 ? ? ? 1_555 E DG 1 O6 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 18 O2 ? ? ? 1_555 E DG 1 N2 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DT 1 N3 ? ? ? 1_555 F DA 18 N1 ? ? B DT 1 E DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DT 1 O4 ? ? ? 1_555 F DA 18 N6 ? ? B DT 1 E DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 2 N3 ? ? ? 1_555 F DA 17 N1 ? ? B DT 2 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 2 O4 ? ? ? 1_555 F DA 17 N6 ? ? B DT 2 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DG 3 N1 ? ? ? 1_555 F DC 16 N3 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 3 N2 ? ? ? 1_555 F DC 16 O2 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 3 O6 ? ? ? 1_555 F DC 16 N4 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DT 4 N3 ? ? ? 1_555 F DA 15 N1 ? ? B DT 4 E DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DT 4 O4 ? ? ? 1_555 F DA 15 N6 ? ? B DT 4 E DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 5 N1 ? ? ? 1_555 F DC 14 N3 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DG 5 N2 ? ? ? 1_555 F DC 14 O2 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DG 5 O6 ? ? ? 1_555 F DC 14 N4 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DT 6 N3 ? ? ? 1_555 F DA 13 N1 ? ? B DT 6 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DT 6 O4 ? ? ? 1_555 F DA 13 N6 ? ? B DT 6 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DT 7 N3 ? ? ? 1_555 F DA 12 N1 ? ? B DT 7 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DT 7 O4 ? ? ? 1_555 F DA 12 N6 ? ? B DT 7 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DT 8 N3 ? ? ? 1_555 F DA 11 N1 ? ? B DT 8 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DT 8 O4 ? ? ? 1_555 F DA 11 N6 ? ? B DT 8 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DT 9 N3 ? ? ? 1_555 F DA 10 N1 ? ? B DT 9 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DT 9 O4 ? ? ? 1_555 F DA 10 N6 ? ? B DT 9 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DA 10 N1 ? ? ? 1_555 F DT 9 N3 ? ? B DA 10 E DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DA 10 N6 ? ? ? 1_555 F DT 9 O4 ? ? B DA 10 E DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DC 11 N3 ? ? ? 1_555 F DG 8 N1 ? ? B DC 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DC 11 N4 ? ? ? 1_555 F DG 8 O6 ? ? B DC 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DC 11 O2 ? ? ? 1_555 F DG 8 N2 ? ? B DC 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B DG 12 N1 ? ? ? 1_555 F DC 7 N3 ? ? B DG 12 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B DG 12 N2 ? ? ? 1_555 F DC 7 O2 ? ? B DG 12 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B DG 12 O6 ? ? ? 1_555 F DC 7 N4 ? ? B DG 12 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B DA 13 N1 ? ? ? 1_555 F DT 6 N3 ? ? B DA 13 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B DA 13 N6 ? ? ? 1_555 F DT 6 O4 ? ? B DA 13 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B DC 14 N3 ? ? ? 1_555 F DG 5 N1 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B DC 14 N4 ? ? ? 1_555 F DG 5 O6 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B DC 14 O2 ? ? ? 1_555 F DG 5 N2 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B DC 15 N3 ? ? ? 1_555 F DG 4 N1 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B DC 15 N4 ? ? ? 1_555 F DG 4 O6 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B DC 15 O2 ? ? ? 1_555 F DG 4 N2 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B DT 16 N3 ? ? ? 1_555 F DA 3 N1 ? ? B DT 16 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B DT 16 O4 ? ? ? 1_555 F DA 3 N6 ? ? B DT 16 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B DC 17 N3 ? ? ? 1_555 F DG 2 N1 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B DC 17 N4 ? ? ? 1_555 F DG 2 O6 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B DC 17 O2 ? ? ? 1_555 F DG 2 N2 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B DC 18 N3 ? ? ? 1_555 F DG 1 N1 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B DC 18 N4 ? ? ? 1_555 F DG 1 O6 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B DC 18 O2 ? ? ? 1_555 F DG 1 N2 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 1 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 184 _struct_mon_prot_cis.auth_asym_id K _struct_mon_prot_cis.pdbx_label_comp_id_2 THR _struct_mon_prot_cis.pdbx_label_seq_id_2 2 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 THR _struct_mon_prot_cis.pdbx_auth_seq_id_2 185 _struct_mon_prot_cis.pdbx_auth_asym_id_2 K _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.90 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP2 A DC 11 ? ? NH2 K ARG 228 ? ? 2.02 2 1 OP1 B DT 8 ? ? O B HOH 101 ? ? 2.17 3 1 NH1 M ARG 209 ? ? OE1 M GLU 241 ? ? 2.19 4 1 OP2 B DC 11 ? ? NH2 M ARG 228 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DT 9 ? ? P A DA 10 ? ? 1.503 1.607 -0.104 0.012 Y 2 1 "O3'" B DT 9 ? ? P B DA 10 ? ? 1.515 1.607 -0.092 0.012 Y 3 1 "O3'" F DG 23 ? ? P F DT 24 ? ? 1.529 1.607 -0.078 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" B DT 9 ? ? P B DT 9 ? ? OP1 B DT 9 ? ? 100.27 105.70 -5.43 0.90 N 2 1 "C5'" B DA 10 ? ? "C4'" B DA 10 ? ? "O4'" B DA 10 ? ? 117.05 109.80 7.25 1.10 N 3 1 "O5'" B DC 15 ? ? P B DC 15 ? ? OP1 B DC 15 ? ? 100.22 105.70 -5.48 0.90 N 4 1 NE K ARG 190 ? ? CZ K ARG 190 ? ? NH1 K ARG 190 ? ? 123.40 120.30 3.10 0.50 N 5 1 NE K ARG 190 ? ? CZ K ARG 190 ? ? NH2 K ARG 190 ? ? 115.91 120.30 -4.39 0.50 N 6 1 NE K ARG 209 ? ? CZ K ARG 209 ? ? NH2 K ARG 209 ? ? 117.23 120.30 -3.07 0.50 N 7 1 NE K ARG 238 ? ? CZ K ARG 238 ? ? NH1 K ARG 238 ? ? 124.25 120.30 3.95 0.50 N 8 1 NE M ARG 190 ? ? CZ M ARG 190 ? ? NH1 M ARG 190 ? ? 123.47 120.30 3.17 0.50 N 9 1 NE M ARG 190 ? ? CZ M ARG 190 ? ? NH2 M ARG 190 ? ? 116.69 120.30 -3.61 0.50 N 10 1 NE M ARG 238 ? ? CZ M ARG 238 ? ? NH1 M ARG 238 ? ? 123.99 120.30 3.69 0.50 N 11 1 CD M LYS 247 ? ? CE M LYS 247 ? ? NZ M LYS 247 ? ? 126.23 111.70 14.53 2.30 N 12 1 "O4'" F DG 22 ? ? "C1'" F DG 22 ? ? N9 F DG 22 ? ? 110.99 108.30 2.69 0.30 N 13 1 "O5'" F DA 31 ? ? P F DA 31 ? ? OP2 F DA 31 ? ? 95.70 105.70 -10.00 0.90 N 14 1 "O4'" E DG 22 ? ? "C1'" E DG 22 ? ? N9 E DG 22 ? ? 111.29 108.30 2.99 0.30 N 15 1 "O5'" E DA 31 ? ? P E DA 31 ? ? OP2 E DA 31 ? ? 100.18 105.70 -5.52 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS K 186 ? ? -164.85 46.66 2 1 LYS M 186 ? ? 172.61 54.37 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 M _pdbx_validate_peptide_omega.auth_seq_id_1 186 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 M _pdbx_validate_peptide_omega.auth_seq_id_2 187 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 147.14 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 73.7954 -4.7816 72.8029 0.2250 0.4123 0.3757 -0.0025 -0.1829 -0.0558 3.0779 6.2595 3.6449 -0.8501 -1.3715 1.8519 -0.1191 -0.2709 0.3900 0.3230 -0.3158 0.4194 -0.1371 0.4460 -0.2852 'X-RAY DIFFRACTION' 2 ? refined 112.0127 -1.8967 87.1855 0.1121 0.5512 0.5289 -0.0321 -0.0359 0.0963 1.5216 5.5696 6.5244 1.4213 -0.5339 -2.1684 0.2403 -0.2159 -0.0244 0.1745 0.1113 -0.1383 0.3719 -0.7187 0.8957 'X-RAY DIFFRACTION' 3 ? refined 84.1228 0.7808 77.7448 0.0972 0.5962 0.4185 0.0445 -0.1958 -0.0414 2.0391 4.3039 2.8951 -0.2953 -0.5959 -0.5637 0.0307 -0.1685 0.1378 0.0550 0.0233 -0.0816 0.0549 -0.1680 0.1615 'X-RAY DIFFRACTION' 4 ? refined 100.8530 -7.2144 84.2767 0.0503 0.6163 0.4763 0.0197 -0.1157 0.0956 1.4844 3.7177 2.1440 -1.2368 0.3133 -0.1189 0.1153 -0.2750 0.1597 0.1191 -0.0274 -0.2431 -0.0573 0.1413 0.0962 'X-RAY DIFFRACTION' 5 ? refined 75.7866 -3.8442 72.9801 0.1563 0.3775 0.3859 0.0253 -0.1949 -0.0539 0.9475 6.5082 3.4680 -0.6800 -1.1419 3.2693 0.1789 -0.1933 0.0144 0.1122 -0.0245 -0.0239 0.0194 0.0097 -0.4364 'X-RAY DIFFRACTION' 6 ? refined 110.3897 -2.7883 86.0577 0.1948 0.4626 0.5676 -0.0138 -0.0702 0.0413 1.9891 6.7929 5.9669 2.1669 -1.0504 -4.8341 0.1788 -0.1170 -0.0618 0.0332 0.4042 0.2082 0.1307 -0.2980 0.3026 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 18 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 B 18 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 K 184 K 255 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 M 184 M 255 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 F 19 F 36 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 E 19 E 36 ? ? ? ? ? ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 109 ? 5.99 . 2 1 O ? K HOH 326 ? 7.54 . 3 1 O ? M HOH 329 ? 7.01 . 4 1 O ? E HOH 109 ? 6.72 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 PHE N N N N 359 PHE CA C N S 360 PHE C C N N 361 PHE O O N N 362 PHE CB C N N 363 PHE CG C Y N 364 PHE CD1 C Y N 365 PHE CD2 C Y N 366 PHE CE1 C Y N 367 PHE CE2 C Y N 368 PHE CZ C Y N 369 PHE OXT O N N 370 PHE H H N N 371 PHE H2 H N N 372 PHE HA H N N 373 PHE HB2 H N N 374 PHE HB3 H N N 375 PHE HD1 H N N 376 PHE HD2 H N N 377 PHE HE1 H N N 378 PHE HE2 H N N 379 PHE HZ H N N 380 PHE HXT H N N 381 SER N N N N 382 SER CA C N S 383 SER C C N N 384 SER O O N N 385 SER CB C N N 386 SER OG O N N 387 SER OXT O N N 388 SER H H N N 389 SER H2 H N N 390 SER HA H N N 391 SER HB2 H N N 392 SER HB3 H N N 393 SER HG H N N 394 SER HXT H N N 395 THR N N N N 396 THR CA C N S 397 THR C C N N 398 THR O O N N 399 THR CB C N R 400 THR OG1 O N N 401 THR CG2 C N N 402 THR OXT O N N 403 THR H H N N 404 THR H2 H N N 405 THR HA H N N 406 THR HB H N N 407 THR HG1 H N N 408 THR HG21 H N N 409 THR HG22 H N N 410 THR HG23 H N N 411 THR HXT H N N 412 TRP N N N N 413 TRP CA C N S 414 TRP C C N N 415 TRP O O N N 416 TRP CB C N N 417 TRP CG C Y N 418 TRP CD1 C Y N 419 TRP CD2 C Y N 420 TRP NE1 N Y N 421 TRP CE2 C Y N 422 TRP CE3 C Y N 423 TRP CZ2 C Y N 424 TRP CZ3 C Y N 425 TRP CH2 C Y N 426 TRP OXT O N N 427 TRP H H N N 428 TRP H2 H N N 429 TRP HA H N N 430 TRP HB2 H N N 431 TRP HB3 H N N 432 TRP HD1 H N N 433 TRP HE1 H N N 434 TRP HE3 H N N 435 TRP HZ2 H N N 436 TRP HZ3 H N N 437 TRP HH2 H N N 438 TRP HXT H N N 439 TYR N N N N 440 TYR CA C N S 441 TYR C C N N 442 TYR O O N N 443 TYR CB C N N 444 TYR CG C Y N 445 TYR CD1 C Y N 446 TYR CD2 C Y N 447 TYR CE1 C Y N 448 TYR CE2 C Y N 449 TYR CZ C Y N 450 TYR OH O N N 451 TYR OXT O N N 452 TYR H H N N 453 TYR H2 H N N 454 TYR HA H N N 455 TYR HB2 H N N 456 TYR HB3 H N N 457 TYR HD1 H N N 458 TYR HD2 H N N 459 TYR HE1 H N N 460 TYR HE2 H N N 461 TYR HH H N N 462 TYR HXT H N N 463 VAL N N N N 464 VAL CA C N S 465 VAL C C N N 466 VAL O O N N 467 VAL CB C N N 468 VAL CG1 C N N 469 VAL CG2 C N N 470 VAL OXT O N N 471 VAL H H N N 472 VAL H2 H N N 473 VAL HA H N N 474 VAL HB H N N 475 VAL HG11 H N N 476 VAL HG12 H N N 477 VAL HG13 H N N 478 VAL HG21 H N N 479 VAL HG22 H N N 480 VAL HG23 H N N 481 VAL HXT H N N 482 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 PHE N CA sing N N 354 PHE N H sing N N 355 PHE N H2 sing N N 356 PHE CA C sing N N 357 PHE CA CB sing N N 358 PHE CA HA sing N N 359 PHE C O doub N N 360 PHE C OXT sing N N 361 PHE CB CG sing N N 362 PHE CB HB2 sing N N 363 PHE CB HB3 sing N N 364 PHE CG CD1 doub Y N 365 PHE CG CD2 sing Y N 366 PHE CD1 CE1 sing Y N 367 PHE CD1 HD1 sing N N 368 PHE CD2 CE2 doub Y N 369 PHE CD2 HD2 sing N N 370 PHE CE1 CZ doub Y N 371 PHE CE1 HE1 sing N N 372 PHE CE2 CZ sing Y N 373 PHE CE2 HE2 sing N N 374 PHE CZ HZ sing N N 375 PHE OXT HXT sing N N 376 SER N CA sing N N 377 SER N H sing N N 378 SER N H2 sing N N 379 SER CA C sing N N 380 SER CA CB sing N N 381 SER CA HA sing N N 382 SER C O doub N N 383 SER C OXT sing N N 384 SER CB OG sing N N 385 SER CB HB2 sing N N 386 SER CB HB3 sing N N 387 SER OG HG sing N N 388 SER OXT HXT sing N N 389 THR N CA sing N N 390 THR N H sing N N 391 THR N H2 sing N N 392 THR CA C sing N N 393 THR CA CB sing N N 394 THR CA HA sing N N 395 THR C O doub N N 396 THR C OXT sing N N 397 THR CB OG1 sing N N 398 THR CB CG2 sing N N 399 THR CB HB sing N N 400 THR OG1 HG1 sing N N 401 THR CG2 HG21 sing N N 402 THR CG2 HG22 sing N N 403 THR CG2 HG23 sing N N 404 THR OXT HXT sing N N 405 TRP N CA sing N N 406 TRP N H sing N N 407 TRP N H2 sing N N 408 TRP CA C sing N N 409 TRP CA CB sing N N 410 TRP CA HA sing N N 411 TRP C O doub N N 412 TRP C OXT sing N N 413 TRP CB CG sing N N 414 TRP CB HB2 sing N N 415 TRP CB HB3 sing N N 416 TRP CG CD1 doub Y N 417 TRP CG CD2 sing Y N 418 TRP CD1 NE1 sing Y N 419 TRP CD1 HD1 sing N N 420 TRP CD2 CE2 doub Y N 421 TRP CD2 CE3 sing Y N 422 TRP NE1 CE2 sing Y N 423 TRP NE1 HE1 sing N N 424 TRP CE2 CZ2 sing Y N 425 TRP CE3 CZ3 doub Y N 426 TRP CE3 HE3 sing N N 427 TRP CZ2 CH2 doub Y N 428 TRP CZ2 HZ2 sing N N 429 TRP CZ3 CH2 sing Y N 430 TRP CZ3 HZ3 sing N N 431 TRP CH2 HH2 sing N N 432 TRP OXT HXT sing N N 433 TYR N CA sing N N 434 TYR N H sing N N 435 TYR N H2 sing N N 436 TYR CA C sing N N 437 TYR CA CB sing N N 438 TYR CA HA sing N N 439 TYR C O doub N N 440 TYR C OXT sing N N 441 TYR CB CG sing N N 442 TYR CB HB2 sing N N 443 TYR CB HB3 sing N N 444 TYR CG CD1 doub Y N 445 TYR CG CD2 sing Y N 446 TYR CD1 CE1 sing Y N 447 TYR CD1 HD1 sing N N 448 TYR CD2 CE2 doub Y N 449 TYR CD2 HD2 sing N N 450 TYR CE1 CZ doub Y N 451 TYR CE1 HE1 sing N N 452 TYR CE2 CZ sing Y N 453 TYR CE2 HE2 sing N N 454 TYR CZ OH sing N N 455 TYR OH HH sing N N 456 TYR OXT HXT sing N N 457 VAL N CA sing N N 458 VAL N H sing N N 459 VAL N H2 sing N N 460 VAL CA C sing N N 461 VAL CA CB sing N N 462 VAL CA HA sing N N 463 VAL C O doub N N 464 VAL C OXT sing N N 465 VAL CB CG1 sing N N 466 VAL CB CG2 sing N N 467 VAL CB HB sing N N 468 VAL CG1 HG11 sing N N 469 VAL CG1 HG12 sing N N 470 VAL CG1 HG13 sing N N 471 VAL CG2 HG21 sing N N 472 VAL CG2 HG22 sing N N 473 VAL CG2 HG23 sing N N 474 VAL OXT HXT sing N N 475 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6ES3 'double helix' 6ES3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 E DA 18 1_555 -0.469 -0.112 -0.244 -4.401 -1.549 1.326 1 A_DT1:DA36_F A 1 ? F 36 ? 20 1 1 A DT 2 1_555 E DA 17 1_555 0.402 -0.215 -0.251 -1.732 1.016 -0.906 2 A_DT2:DA35_F A 2 ? F 35 ? 20 1 1 A DG 3 1_555 E DC 16 1_555 0.059 -0.059 0.056 3.272 1.225 -1.207 3 A_DG3:DC34_F A 3 ? F 34 ? 19 1 1 A DT 4 1_555 E DA 15 1_555 -0.056 -0.115 0.104 6.487 -2.612 -1.355 4 A_DT4:DA33_F A 4 ? F 33 ? 20 1 1 A DG 5 1_555 E DC 14 1_555 -0.102 -0.090 0.325 5.172 -10.135 -0.676 5 A_DG5:DC32_F A 5 ? F 32 ? 19 1 1 A DT 6 1_555 E DA 13 1_555 -0.175 -0.119 0.141 1.385 -14.076 0.249 6 A_DT6:DA31_F A 6 ? F 31 ? 20 1 1 A DT 7 1_555 E DA 12 1_555 0.194 -0.175 0.236 -5.814 -15.786 -1.919 7 A_DT7:DA30_F A 7 ? F 30 ? 20 1 1 A DT 8 1_555 E DA 11 1_555 0.014 -0.099 0.171 -10.610 -10.543 -0.058 8 A_DT8:DA29_F A 8 ? F 29 ? 20 1 1 A DT 9 1_555 E DA 10 1_555 0.133 -0.119 -0.016 -8.177 -4.199 -1.944 9 A_DT9:DA28_F A 9 ? F 28 ? 20 1 1 A DA 10 1_555 E DT 9 1_555 -0.017 -0.179 0.412 -3.411 -2.909 0.500 10 A_DA10:DT27_F A 10 ? F 27 ? 20 1 1 A DC 11 1_555 E DG 8 1_555 0.373 -0.158 0.264 -0.737 -3.209 -1.610 11 A_DC11:DG26_F A 11 ? F 26 ? 19 1 1 A DG 12 1_555 E DC 7 1_555 0.221 -0.063 0.328 4.497 -2.437 -1.146 12 A_DG12:DC25_F A 12 ? F 25 ? 19 1 1 A DA 13 1_555 E DT 6 1_555 0.220 -0.089 0.223 6.016 -6.663 -3.812 13 A_DA13:DT24_F A 13 ? F 24 ? 20 1 1 A DC 14 1_555 E DG 5 1_555 0.227 -0.098 0.109 4.427 -10.312 -1.275 14 A_DC14:DG23_F A 14 ? F 23 ? 19 1 1 A DC 15 1_555 E DG 4 1_555 -0.102 -0.079 0.332 -3.764 -8.216 -1.252 15 A_DC15:DG22_F A 15 ? F 22 ? 19 1 1 A DT 16 1_555 E DA 3 1_555 -0.249 -0.081 0.171 -2.593 -3.789 -1.871 16 A_DT16:DA21_F A 16 ? F 21 ? 20 1 1 A DC 17 1_555 E DG 2 1_555 0.748 -0.279 0.349 -2.656 -1.552 -0.837 17 A_DC17:DG20_F A 17 ? F 20 ? 19 1 1 A DC 18 1_555 E DG 1 1_555 0.065 -0.083 -0.034 1.308 2.666 -0.727 18 A_DC18:DG19_F A 18 ? F 19 ? 19 1 1 B DT 1 1_555 F DA 18 1_555 -0.744 -0.094 -0.068 -2.398 -0.570 -1.841 19 B_DT1:DA36_E B 1 ? E 36 ? 20 1 1 B DT 2 1_555 F DA 17 1_555 0.273 -0.162 -0.099 0.890 0.637 -1.203 20 B_DT2:DA35_E B 2 ? E 35 ? 20 1 1 B DG 3 1_555 F DC 16 1_555 -0.031 -0.065 0.247 4.585 -0.876 -0.989 21 B_DG3:DC34_E B 3 ? E 34 ? 19 1 1 B DT 4 1_555 F DA 15 1_555 -0.241 -0.111 0.261 6.764 -4.655 -0.605 22 B_DT4:DA33_E B 4 ? E 33 ? 20 1 1 B DG 5 1_555 F DC 14 1_555 -0.044 -0.080 0.369 4.068 -9.793 -1.457 23 B_DG5:DC32_E B 5 ? E 32 ? 19 1 1 B DT 6 1_555 F DA 13 1_555 -0.160 -0.119 0.182 0.940 -13.465 -1.124 24 B_DT6:DA31_E B 6 ? E 31 ? 20 1 1 B DT 7 1_555 F DA 12 1_555 0.196 -0.178 0.256 -5.225 -15.640 -2.851 25 B_DT7:DA30_E B 7 ? E 30 ? 20 1 1 B DT 8 1_555 F DA 11 1_555 0.020 -0.126 0.185 -9.866 -10.939 0.013 26 B_DT8:DA29_E B 8 ? E 29 ? 20 1 1 B DT 9 1_555 F DA 10 1_555 0.095 -0.140 0.019 -8.373 -4.798 -1.112 27 B_DT9:DA28_E B 9 ? E 28 ? 20 1 1 B DA 10 1_555 F DT 9 1_555 -0.065 -0.166 0.414 -3.102 -2.652 0.530 28 B_DA10:DT27_E B 10 ? E 27 ? 20 1 1 B DC 11 1_555 F DG 8 1_555 0.362 -0.149 0.278 -0.629 -3.215 -1.186 29 B_DC11:DG26_E B 11 ? E 26 ? 19 1 1 B DG 12 1_555 F DC 7 1_555 0.193 -0.080 0.326 4.367 -2.671 -0.495 30 B_DG12:DC25_E B 12 ? E 25 ? 19 1 1 B DA 13 1_555 F DT 6 1_555 0.148 -0.103 0.238 6.034 -6.444 -3.567 31 B_DA13:DT24_E B 13 ? E 24 ? 20 1 1 B DC 14 1_555 F DG 5 1_555 0.182 -0.102 0.140 4.766 -9.799 -1.353 32 B_DC14:DG23_E B 14 ? E 23 ? 19 1 1 B DC 15 1_555 F DG 4 1_555 -0.212 -0.081 0.343 -2.073 -8.470 -0.966 33 B_DC15:DG22_E B 15 ? E 22 ? 19 1 1 B DT 16 1_555 F DA 3 1_555 -0.657 -0.112 0.091 0.137 -4.929 -1.858 34 B_DT16:DA21_E B 16 ? E 21 ? 20 1 1 B DC 17 1_555 F DG 2 1_555 0.051 -0.093 0.360 -1.309 -4.394 -1.149 35 B_DC17:DG20_E B 17 ? E 20 ? 19 1 1 B DC 18 1_555 F DG 1 1_555 1.172 -0.458 -0.034 -1.038 1.193 -0.566 36 B_DC18:DG19_E B 18 ? E 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 E DA 18 1_555 A DT 2 1_555 E DA 17 1_555 0.179 0.027 3.315 -0.696 -0.486 37.496 0.107 -0.371 3.311 -0.756 1.083 37.505 1 AA_DT1DT2:DA35DA36_FF A 1 ? F 36 ? A 2 ? F 35 ? 1 A DT 2 1_555 E DA 17 1_555 A DG 3 1_555 E DC 16 1_555 0.571 1.484 3.121 -2.811 0.944 35.471 2.297 -1.324 3.105 1.547 4.604 35.591 2 AA_DT2DG3:DC34DA35_FF A 2 ? F 35 ? A 3 ? F 34 ? 1 A DG 3 1_555 E DC 16 1_555 A DT 4 1_555 E DA 15 1_555 -0.235 -0.142 3.308 -1.967 1.757 25.486 -0.823 -0.034 3.299 3.970 4.445 25.620 3 AA_DG3DT4:DA33DC34_FF A 3 ? F 34 ? A 4 ? F 33 ? 1 A DT 4 1_555 E DA 15 1_555 A DG 5 1_555 E DC 14 1_555 0.382 0.012 3.217 -0.624 4.372 38.890 -0.497 -0.645 3.194 6.541 0.934 39.131 4 AA_DT4DG5:DC32DA33_FF A 4 ? F 33 ? A 5 ? F 32 ? 1 A DG 5 1_555 E DC 14 1_555 A DT 6 1_555 E DA 13 1_555 -0.154 -0.907 3.304 1.105 1.053 33.166 -1.765 0.456 3.268 1.844 -1.934 33.200 5 AA_DG5DT6:DA31DC32_FF A 5 ? F 32 ? A 6 ? F 31 ? 1 A DT 6 1_555 E DA 13 1_555 A DT 7 1_555 E DA 12 1_555 -0.350 -0.581 3.401 0.805 0.964 38.367 -1.008 0.637 3.378 1.467 -1.225 38.387 6 AA_DT6DT7:DA30DA31_FF A 6 ? F 31 ? A 7 ? F 30 ? 1 A DT 7 1_555 E DA 12 1_555 A DT 8 1_555 E DA 11 1_555 0.134 -0.093 3.287 0.618 3.091 38.098 -0.533 -0.126 3.271 4.726 -0.945 38.224 7 AA_DT7DT8:DA29DA30_FF A 7 ? F 30 ? A 8 ? F 29 ? 1 A DT 8 1_555 E DA 11 1_555 A DT 9 1_555 E DA 10 1_555 -0.535 -0.068 3.275 0.250 4.757 32.957 -0.912 0.976 3.230 8.330 -0.437 33.290 8 AA_DT8DT9:DA28DA29_FF A 8 ? F 29 ? A 9 ? F 28 ? 1 A DT 9 1_555 E DA 10 1_555 A DA 10 1_555 E DT 9 1_555 1.126 -0.380 3.152 0.644 5.358 36.173 -1.313 -1.710 3.085 8.571 -1.031 36.560 9 AA_DT9DA10:DT27DA28_FF A 9 ? F 28 ? A 10 ? F 27 ? 1 A DA 10 1_555 E DT 9 1_555 A DC 11 1_555 E DG 8 1_555 -0.340 -0.869 3.260 -0.270 3.612 27.856 -2.624 0.638 3.128 7.462 0.558 28.086 10 AA_DA10DC11:DG26DT27_FF A 10 ? F 27 ? A 11 ? F 26 ? 1 A DC 11 1_555 E DG 8 1_555 A DG 12 1_555 E DC 7 1_555 -0.695 -0.022 3.189 -0.514 4.432 33.420 -0.741 1.117 3.171 7.664 0.888 33.708 11 AA_DC11DG12:DC25DG26_FF A 11 ? F 26 ? A 12 ? F 25 ? 1 A DG 12 1_555 E DC 7 1_555 A DA 13 1_555 E DT 6 1_555 -0.102 -0.336 3.265 -0.340 4.556 34.035 -1.277 0.120 3.195 7.741 0.577 34.332 12 AA_DG12DA13:DT24DC25_FF A 12 ? F 25 ? A 13 ? F 24 ? 1 A DA 13 1_555 E DT 6 1_555 A DC 14 1_555 E DG 5 1_555 0.622 -0.968 3.457 -0.583 4.008 28.139 -2.924 -1.404 3.277 8.190 1.191 28.423 13 AA_DA13DC14:DG23DT24_FF A 13 ? F 24 ? A 14 ? F 23 ? 1 A DC 14 1_555 E DG 5 1_555 A DC 15 1_555 E DG 4 1_555 0.606 -0.939 3.316 2.427 2.620 38.914 -1.723 -0.611 3.279 3.922 -3.634 39.072 14 AA_DC14DC15:DG22DG23_FF A 14 ? F 23 ? A 15 ? F 22 ? 1 A DC 15 1_555 E DG 4 1_555 A DT 16 1_555 E DA 3 1_555 -0.697 -0.456 3.418 1.125 0.778 28.455 -1.112 1.684 3.375 1.582 -2.287 28.487 15 AA_DC15DT16:DA21DG22_FF A 15 ? F 22 ? A 16 ? F 21 ? 1 A DT 16 1_555 E DA 3 1_555 A DC 17 1_555 E DG 2 1_555 0.855 0.010 3.374 1.653 -1.393 39.973 0.180 -1.053 3.403 -2.037 -2.416 40.029 16 AA_DT16DC17:DG20DA21_FF A 16 ? F 21 ? A 17 ? F 20 ? 1 A DC 17 1_555 E DG 2 1_555 A DC 18 1_555 E DG 1 1_555 0.263 0.445 6.725 3.130 -3.117 1.368 60.911 52.365 1.868 -51.371 -51.580 4.624 17 AA_DC17DC18:DG19DG20_FF A 17 ? F 20 ? A 18 ? F 19 ? 1 B DT 1 1_555 F DA 18 1_555 B DT 2 1_555 F DA 17 1_555 0.240 0.018 3.296 -0.411 -0.193 38.121 0.053 -0.419 3.293 -0.295 0.630 38.123 18 BB_DT1DT2:DA35DA36_EE B 1 ? E 36 ? B 2 ? E 35 ? 1 B DT 2 1_555 F DA 17 1_555 B DG 3 1_555 F DC 16 1_555 0.609 1.497 3.134 -2.309 0.496 36.461 2.322 -1.275 3.110 0.791 3.685 36.535 19 BB_DT2DG3:DC34DA35_EE B 2 ? E 35 ? B 3 ? E 34 ? 1 B DG 3 1_555 F DC 16 1_555 B DT 4 1_555 F DA 15 1_555 -0.198 -0.141 3.308 -1.790 1.487 25.989 -0.723 -0.055 3.301 3.299 3.970 26.091 20 BB_DG3DT4:DA33DC34_EE B 3 ? E 34 ? B 4 ? E 33 ? 1 B DT 4 1_555 F DA 15 1_555 B DG 5 1_555 F DC 14 1_555 0.353 0.060 3.260 0.152 2.373 41.017 -0.172 -0.487 3.260 3.383 -0.217 41.083 21 BB_DT4DG5:DC32DA33_EE B 4 ? E 33 ? B 5 ? E 32 ? 1 B DG 5 1_555 F DC 14 1_555 B DT 6 1_555 F DA 13 1_555 -0.146 -0.902 3.296 1.160 0.844 32.954 -1.733 0.455 3.266 1.487 -2.044 32.985 22 BB_DG5DT6:DA31DC32_EE B 5 ? E 32 ? B 6 ? E 31 ? 1 B DT 6 1_555 F DA 13 1_555 B DT 7 1_555 F DA 12 1_555 -0.328 -0.586 3.379 0.991 0.494 38.255 -0.957 0.628 3.363 0.754 -1.511 38.270 23 BB_DT6DT7:DA30DA31_EE B 6 ? E 31 ? B 7 ? E 30 ? 1 B DT 7 1_555 F DA 12 1_555 B DT 8 1_555 F DA 11 1_555 0.183 -0.099 3.284 0.812 2.691 38.418 -0.484 -0.176 3.273 4.083 -1.231 38.517 24 BB_DT7DT8:DA29DA30_EE B 7 ? E 30 ? B 8 ? E 29 ? 1 B DT 8 1_555 F DA 11 1_555 B DT 9 1_555 F DA 10 1_555 -0.496 -0.076 3.296 0.133 4.453 33.240 -0.868 0.882 3.257 7.742 -0.232 33.529 25 BB_DT8DT9:DA28DA29_EE B 8 ? E 29 ? B 9 ? E 28 ? 1 B DT 9 1_555 F DA 10 1_555 B DA 10 1_555 F DT 9 1_555 1.058 -0.347 3.154 0.397 4.899 35.593 -1.233 -1.661 3.092 7.968 -0.646 35.920 26 BB_DT9DA10:DT27DA28_EE B 9 ? E 28 ? B 10 ? E 27 ? 1 B DA 10 1_555 F DT 9 1_555 B DC 11 1_555 F DG 8 1_555 -0.321 -0.880 3.272 -0.388 3.522 27.811 -2.636 0.573 3.143 7.290 0.804 28.031 27 BB_DA10DC11:DG26DT27_EE B 10 ? E 27 ? B 11 ? E 26 ? 1 B DC 11 1_555 F DG 8 1_555 B DG 12 1_555 F DC 7 1_555 -0.706 -0.053 3.179 -0.617 4.271 33.908 -0.747 1.106 3.161 7.286 1.053 34.173 28 BB_DC11DG12:DC25DG26_EE B 11 ? E 26 ? B 12 ? E 25 ? 1 B DG 12 1_555 F DC 7 1_555 B DA 13 1_555 F DT 6 1_555 -0.107 -0.345 3.256 -0.668 4.923 33.883 -1.353 0.078 3.178 8.391 1.139 34.235 29 BB_DG12DA13:DT24DC25_EE B 12 ? E 25 ? B 13 ? E 24 ? 1 B DA 13 1_555 F DT 6 1_555 B DC 14 1_555 F DG 5 1_555 0.627 -0.983 3.448 -0.801 4.244 28.395 -2.966 -1.450 3.251 8.589 1.621 28.715 30 BB_DA13DC14:DG23DT24_EE B 13 ? E 24 ? B 14 ? E 23 ? 1 B DC 14 1_555 F DG 5 1_555 B DC 15 1_555 F DG 4 1_555 0.607 -0.934 3.286 2.362 2.961 38.188 -1.791 -0.629 3.237 4.513 -3.599 38.368 31 BB_DC14DC15:DG22DG23_EE B 14 ? E 23 ? B 15 ? E 22 ? 1 B DC 15 1_555 F DG 4 1_555 B DT 16 1_555 F DA 3 1_555 -0.724 -0.493 3.369 1.571 1.199 26.792 -1.375 1.972 3.297 2.583 -3.385 26.864 32 BB_DC15DT16:DA21DG22_EE B 15 ? E 22 ? B 16 ? E 21 ? 1 B DT 16 1_555 F DA 3 1_555 B DC 17 1_555 F DG 2 1_555 0.842 -0.021 3.381 1.303 -1.163 38.632 0.117 -1.105 3.405 -1.757 -1.969 38.670 33 BB_DT16DC17:DG20DA21_EE B 16 ? E 21 ? B 17 ? E 20 ? 1 B DC 17 1_555 F DG 2 1_555 B DC 18 1_555 F DG 1 1_555 0.507 0.843 6.796 2.822 -3.667 10.017 15.972 6.277 6.022 -19.681 -15.145 11.031 34 BB_DC17DC18:DG19DG20_EE B 17 ? E 20 ? B 18 ? E 19 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5LTY _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6ES3 _atom_sites.fract_transf_matrix[1][1] 0.007816 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003361 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021510 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015801 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P # loop_