HEADER DNA BINDING PROTEIN 19-OCT-17 6ES6 TITLE STRUCTURE AND DYNAMICS CONSPIRE IN THE EVOLUTION OF AFFINITY BETWEEN TITLE 2 INTRINSICALLY DISORDERED PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CID; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NCBD; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NCBD, CID, COMPLEX, IDP, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.C.CHI REVDAT 2 15-MAY-19 6ES6 1 JRNL REVDAT 1 31-OCT-18 6ES6 0 JRNL AUTH P.JEMTH,E.KARLSSON,B.VOGELI,B.GUZOVSKY,E.ANDERSSON, JRNL AUTH 2 G.HULTQVIST,J.DOGAN,P.GUNTERT,R.RIEK,C.N.CHI JRNL TITL STRUCTURE AND DYNAMICS CONSPIRE IN THE EVOLUTION OF AFFINITY JRNL TITL 2 BETWEEN INTRINSICALLY DISORDERED PROTEINS. JRNL REF SCI ADV V. 4 U4130 2018 JRNL REFN ESSN 2375-2548 JRNL PMID 30397651 JRNL DOI 10.1126/SCIADV.AAU4130 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ES6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200007172. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 PA REMARK 210 SAMPLE CONTENTS : 100 UM [U-99% 15N]/ U-13C CID, REMARK 210 100 UM [U-99% 15N]/ U-13C NCBD, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 2D 1H-13C HSQC; 3D 1H REMARK 210 -1H NOESY; 2D 1H-1H TOCSY; 2J REMARK 210 HNHA; 3D HNCO; FILTERED NOESY; REMARK 210 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; AVANCEII; AVANCEIII REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A1039 95.44 61.36 REMARK 500 1 GLU A1040 72.33 47.19 REMARK 500 1 SER A1041 -74.86 -155.03 REMARK 500 1 ASN A1043 16.15 -146.21 REMARK 500 1 GLN A1051 -70.65 -75.84 REMARK 500 1 SER A1058 36.35 -94.22 REMARK 500 1 SER B2061 88.85 -156.96 REMARK 500 1 PRO B2077 88.24 -69.76 REMARK 500 1 PRO B2094 -88.26 -69.77 REMARK 500 1 ARG B2104 -70.23 -56.13 REMARK 500 2 SER A1039 38.35 -170.59 REMARK 500 2 GLU A1040 -75.19 -79.19 REMARK 500 2 GLN A1042 -53.10 -172.28 REMARK 500 2 ASN A1043 30.63 -145.83 REMARK 500 2 SER A1058 36.66 -92.45 REMARK 500 2 GLN A1080 87.70 50.25 REMARK 500 2 SER B2061 87.70 62.92 REMARK 500 2 PRO B2064 -170.80 -69.73 REMARK 500 2 PRO B2077 53.10 -69.71 REMARK 500 2 SER B2079 171.10 -54.90 REMARK 500 2 PRO B2094 -89.09 -69.83 REMARK 500 3 SER A1039 -49.69 -136.97 REMARK 500 3 GLU A1040 -171.11 66.45 REMARK 500 3 ASN A1043 49.21 -140.23 REMARK 500 3 ASP A1044 -165.31 -78.94 REMARK 500 3 SER A1058 36.95 -93.68 REMARK 500 3 GLN A1079 133.16 176.90 REMARK 500 3 SER B2061 35.19 -153.37 REMARK 500 3 PRO B2064 -170.69 -69.78 REMARK 500 3 PRO B2077 87.66 -69.74 REMARK 500 3 SER B2079 170.19 -54.93 REMARK 500 3 PRO B2094 -86.92 -69.74 REMARK 500 3 ARG B2104 -71.87 -54.97 REMARK 500 4 SER A1041 169.50 66.36 REMARK 500 4 GLN A1042 30.76 -91.80 REMARK 500 4 SER A1058 36.78 -93.64 REMARK 500 4 GLN A1079 119.18 -160.92 REMARK 500 4 PRO B2064 -173.41 -69.74 REMARK 500 4 PRO B2077 59.39 -69.80 REMARK 500 4 SER B2079 172.49 -56.36 REMARK 500 4 PRO B2094 -81.96 -69.72 REMARK 500 5 SER A1039 -73.66 -68.13 REMARK 500 5 GLU A1040 120.99 67.45 REMARK 500 5 GLN A1042 -46.91 -165.62 REMARK 500 5 ASN A1043 31.14 -144.49 REMARK 500 5 GLN A1051 -72.82 -72.14 REMARK 500 5 SER A1058 37.08 -95.86 REMARK 500 5 SER A1078 -46.78 75.47 REMARK 500 5 GLN A1079 140.68 -170.74 REMARK 500 5 SER B2061 54.82 -167.37 REMARK 500 REMARK 500 THIS ENTRY HAS 205 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34188 RELATED DB: BMRB REMARK 900 EVOLUTION OF STRUCTURE AND CONFORMATIONAL DYNAMICS IN INTRINSICALLY REMARK 900 DISORDERED PROTEINS OVER 600 MILLION YEARS DBREF 6ES6 A 1038 1082 PDB 6ES6 6ES6 1038 1082 DBREF 6ES6 B 2060 2109 PDB 6ES6 6ES6 2060 2109 SEQRES 1 A 45 GLY SER GLU SER GLN ASN ASP GLU LYS ALA LEU LEU ASP SEQRES 2 A 45 GLN LEU ASP SER LEU LEU SER SER THR ASP GLU MET GLU SEQRES 3 A 45 LEU ALA GLU ILE ASP ARG ALA LEU GLY ILE ASP LYS LEU SEQRES 4 A 45 VAL SER GLN GLN GLY GLY SEQRES 1 B 50 GLY SER ILE PRO PRO ASN ALA LEU GLN ASP LEU LEU ARG SEQRES 2 B 50 THR LEU ARG SER PRO SER SER PRO GLN GLN GLN GLN GLN SEQRES 3 B 50 VAL LEU ASN ILE LEU LYS SER ASN PRO GLN LEU MET ALA SEQRES 4 B 50 ALA PHE ILE LYS GLN ARG ALA ALA LYS TYR GLN HELIX 1 AA1 ASP A 1044 ASP A 1053 1 10 HELIX 2 AA2 SER A 1054 THR A 1059 5 6 HELIX 3 AA3 ASP A 1060 GLY A 1072 1 13 HELIX 4 AA4 PRO B 2064 THR B 2073 1 10 HELIX 5 AA5 SER B 2079 GLN B 2082 5 4 HELIX 6 AA6 GLN B 2083 ASN B 2093 1 11 HELIX 7 AA7 ASN B 2093 ARG B 2104 1 12 HELIX 8 AA8 ALA B 2105 GLN B 2109 5 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1