HEADER PROTEIN BINDING 24-OCT-17 6ESP TITLE PROTEOME-WIDE ANALYSIS OF PHOSPHO-REGULATED PDZ DOMAIN INTERACTIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SCRIBBLE HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSCRIB,PROTEIN LAP4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PDZ, PHOSPHORYLATION, SCRIBBLE, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.C.CHI REVDAT 3 08-MAY-19 6ESP 1 REMARK REVDAT 2 26-SEP-18 6ESP 1 JRNL REVDAT 1 05-SEP-18 6ESP 0 JRNL AUTH G.N.SUNDELL,R.ARNOLD,M.ALI,P.NAKSUKPAIBOON,J.ORTS,P.GUNTERT, JRNL AUTH 2 C.N.CHI,Y.IVARSSON JRNL TITL PROTEOME-WIDE ANALYSIS OF PHOSPHO-REGULATED PDZ DOMAIN JRNL TITL 2 INTERACTIONS. JRNL REF MOL. SYST. BIOL. V. 14 E8129 2018 JRNL REFN ESSN 1744-4292 JRNL PMID 30126976 JRNL DOI 10.15252/MSB.20178129 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ESP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200007175. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NA REMARK 210 PRESSURE : 1 PA REMARK 210 SAMPLE CONTENTS : 100 % [U-100% 13C] SCRIBBLE REMARK 210 PDZ1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-1H TOCSY; REMARK 210 3D HNCACB; 3D 1H-1H NOESY; 3J REMARK 210 HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, CCPNMR ANALYSIS, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 105.38 -176.92 REMARK 500 1 GLU A 13 105.57 69.34 REMARK 500 1 LEU A 25 31.95 -157.19 REMARK 500 1 ALA A 30 115.27 -178.98 REMARK 500 1 LYS A 33 -75.61 -173.19 REMARK 500 1 ASP A 41 85.45 -161.20 REMARK 500 1 ASP A 42 137.48 -171.29 REMARK 500 1 GLU A 43 -37.80 -132.75 REMARK 500 1 SER A 48 92.00 -169.54 REMARK 500 1 ARG A 49 83.44 175.19 REMARK 500 1 PRO A 55 75.38 -69.75 REMARK 500 1 ALA A 56 -36.19 -155.61 REMARK 500 1 ALA A 57 -54.92 -149.62 REMARK 500 1 ARG A 62 76.44 -163.78 REMARK 500 1 VAL A 63 82.58 35.94 REMARK 500 1 ALA A 78 -179.59 -58.07 REMARK 500 1 MET A 103 -80.70 -136.53 REMARK 500 1 PRO A 114 -170.77 -69.84 REMARK 500 2 ALA A 2 74.08 -100.42 REMARK 500 2 GLU A 10 103.14 -50.77 REMARK 500 2 GLU A 13 76.42 38.72 REMARK 500 2 ARG A 20 173.24 -57.48 REMARK 500 2 GLN A 21 100.36 73.65 REMARK 500 2 ILE A 27 -178.47 -56.28 REMARK 500 2 SER A 28 49.16 -141.30 REMARK 500 2 ALA A 30 123.98 178.12 REMARK 500 2 LYS A 33 -60.29 74.47 REMARK 500 2 THR A 36 150.11 -47.90 REMARK 500 2 ASP A 41 87.16 -161.38 REMARK 500 2 ASP A 42 141.94 -171.09 REMARK 500 2 GLU A 43 -35.93 -130.14 REMARK 500 2 SER A 48 93.19 -174.12 REMARK 500 2 ARG A 49 85.01 175.86 REMARK 500 2 ALA A 57 -53.90 -149.42 REMARK 500 2 VAL A 61 171.83 -51.59 REMARK 500 2 ARG A 62 70.40 -158.43 REMARK 500 2 VAL A 63 51.45 36.07 REMARK 500 2 GLU A 79 -169.48 -101.63 REMARK 500 2 ALA A 93 88.93 -158.69 REMARK 500 2 MET A 103 -76.50 -127.57 REMARK 500 2 PRO A 114 -171.09 -69.75 REMARK 500 3 MET A 3 41.97 39.29 REMARK 500 3 ALA A 5 73.88 -114.92 REMARK 500 3 GLU A 10 104.83 -49.88 REMARK 500 3 GLU A 13 102.61 71.78 REMARK 500 3 THR A 22 -44.79 -138.39 REMARK 500 3 LEU A 25 50.44 32.30 REMARK 500 3 ALA A 30 123.85 179.96 REMARK 500 3 LYS A 33 -36.65 -173.40 REMARK 500 3 SER A 35 160.78 -47.06 REMARK 500 REMARK 500 THIS ENTRY HAS 442 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34190 RELATED DB: BMRB REMARK 900 EXPLORING PHOSPHO-REGULATED PDZ DOMAINS INTERACTIONS THROUGH REMARK 900 PHOSPHOMIMETIC PROTEOMIC PEPTIDE PHAGE DISPLAY DBREF 6ESP A 6 116 UNP Q14160 SCRIB_HUMAN 719 829 SEQADV 6ESP GLY A 1 UNP Q14160 EXPRESSION TAG SEQADV 6ESP ALA A 2 UNP Q14160 EXPRESSION TAG SEQADV 6ESP MET A 3 UNP Q14160 EXPRESSION TAG SEQADV 6ESP GLY A 4 UNP Q14160 EXPRESSION TAG SEQADV 6ESP ALA A 5 UNP Q14160 EXPRESSION TAG SEQRES 1 A 116 GLY ALA MET GLY ALA PRO ALA ARG ILE GLU GLU GLU GLU SEQRES 2 A 116 LEU THR LEU THR ILE LEU ARG GLN THR GLY GLY LEU GLY SEQRES 3 A 116 ILE SER ILE ALA GLY GLY LYS GLY SER THR PRO TYR LYS SEQRES 4 A 116 GLY ASP ASP GLU GLY ILE PHE ILE SER ARG VAL SER GLU SEQRES 5 A 116 GLU GLY PRO ALA ALA ARG ALA GLY VAL ARG VAL GLY ASP SEQRES 6 A 116 LYS LEU LEU GLU VAL ASN GLY VAL ALA LEU GLN GLY ALA SEQRES 7 A 116 GLU HIS HIS GLU ALA VAL GLU ALA LEU ARG GLY ALA GLY SEQRES 8 A 116 THR ALA VAL GLN MET ARG VAL TRP ARG GLU ARG MET VAL SEQRES 9 A 116 GLU PRO GLU ASN ALA VAL THR ILE THR PRO LEU ARG HELIX 1 AA1 GLU A 79 GLY A 91 1 13 HELIX 2 AA2 PRO A 106 THR A 111 1 6 SHEET 1 AA1 2 LEU A 14 LEU A 19 0 SHEET 2 AA1 2 ALA A 93 VAL A 98 -1 O VAL A 94 N ILE A 18 SHEET 1 AA2 2 GLU A 69 VAL A 70 0 SHEET 2 AA2 2 VAL A 73 ALA A 74 -1 O VAL A 73 N VAL A 70 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1