data_6EW8 # _entry.id 6EW8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.300 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6EW8 WWPDB D_1200007357 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5N21 unspecified PDB . 5N20 unspecified PDB . 5N1Z unspecified PDB . 5N1X unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6EW8 _pdbx_database_status.recvd_initial_deposition_date 2017-11-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Robb, G.' 1 ? 'Ferguson, A.' 2 ? 'Hargreaves, D.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'ACS Chem. Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1554-8937 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 3131 _citation.page_last 3141 _citation.title 'Development of a Novel B-Cell Lymphoma 6 (BCL6) PROTAC To Provide Insight into Small Molecule Targeting of BCL6.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acschembio.8b00698 _citation.pdbx_database_id_PubMed 30335946 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McCoull, W.' 1 ? primary 'Cheung, T.' 2 ? primary 'Anderson, E.' 3 ? primary 'Barton, P.' 4 ? primary 'Burgess, J.' 5 ? primary 'Byth, K.' 6 ? primary 'Cao, Q.' 7 ? primary 'Castaldi, M.P.' 8 ? primary 'Chen, H.' 9 ? primary 'Chiarparin, E.' 10 ? primary 'Carbajo, R.J.' 11 ? primary 'Code, E.' 12 ? primary 'Cowan, S.' 13 ? primary 'Davey, P.R.' 14 ? primary 'Ferguson, A.D.' 15 ? primary 'Fillery, S.' 16 ? primary 'Fuller, N.O.' 17 ? primary 'Gao, N.' 18 ? primary 'Hargreaves, D.' 19 ? primary 'Howard, M.R.' 20 ? primary 'Hu, J.' 21 ? primary 'Kawatkar, A.' 22 ? primary 'Kemmitt, P.D.' 23 ? primary 'Leo, E.' 24 ? primary 'Molina, D.M.' 25 ? primary ;O'Connell, N. ; 26 ? primary 'Petteruti, P.' 27 ? primary 'Rasmusson, T.' 28 ? primary 'Raubo, P.' 29 ? primary 'Rawlins, P.B.' 30 ? primary 'Ricchiuto, P.' 31 ? primary 'Robb, G.R.' 32 ? primary 'Schenone, M.' 33 ? primary 'Waring, M.J.' 34 ? primary 'Zinda, M.' 35 ? primary 'Fawell, S.' 36 ? primary 'Wilson, D.M.' 37 ? # _cell.entry_id 6EW8 _cell.length_a 30.668 _cell.length_b 73.017 _cell.length_c 53.995 _cell.angle_alpha 90.00 _cell.angle_beta 104.55 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EW8 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 14344.615 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'anilinopyrimidine ligand' 444.915 1 ? ? ? ? 4 water nat water 18.015 100 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNI LLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_seq_one_letter_code_can ;DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNI LLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 SER n 1 3 GLN n 1 4 ILE n 1 5 GLN n 1 6 PHE n 1 7 THR n 1 8 ARG n 1 9 HIS n 1 10 ALA n 1 11 SER n 1 12 ASP n 1 13 VAL n 1 14 LEU n 1 15 LEU n 1 16 ASN n 1 17 LEU n 1 18 ASN n 1 19 ARG n 1 20 LEU n 1 21 ARG n 1 22 SER n 1 23 ARG n 1 24 ASP n 1 25 ILE n 1 26 LEU n 1 27 THR n 1 28 ASP n 1 29 VAL n 1 30 VAL n 1 31 ILE n 1 32 VAL n 1 33 VAL n 1 34 SER n 1 35 ARG n 1 36 GLU n 1 37 GLN n 1 38 PHE n 1 39 ARG n 1 40 ALA n 1 41 HIS n 1 42 LYS n 1 43 THR n 1 44 VAL n 1 45 LEU n 1 46 MET n 1 47 ALA n 1 48 CYS n 1 49 SER n 1 50 GLY n 1 51 LEU n 1 52 PHE n 1 53 TYR n 1 54 SER n 1 55 ILE n 1 56 PHE n 1 57 THR n 1 58 ASP n 1 59 GLN n 1 60 LEU n 1 61 LYS n 1 62 ARG n 1 63 ASN n 1 64 LEU n 1 65 SER n 1 66 VAL n 1 67 ILE n 1 68 ASN n 1 69 LEU n 1 70 ASP n 1 71 PRO n 1 72 GLU n 1 73 ILE n 1 74 ASN n 1 75 PRO n 1 76 GLU n 1 77 GLY n 1 78 PHE n 1 79 ASN n 1 80 ILE n 1 81 LEU n 1 82 LEU n 1 83 ASP n 1 84 PHE n 1 85 MET n 1 86 TYR n 1 87 THR n 1 88 SER n 1 89 ARG n 1 90 LEU n 1 91 ASN n 1 92 LEU n 1 93 ARG n 1 94 GLU n 1 95 GLY n 1 96 ASN n 1 97 ILE n 1 98 MET n 1 99 ALA n 1 100 VAL n 1 101 MET n 1 102 ALA n 1 103 THR n 1 104 ALA n 1 105 MET n 1 106 TYR n 1 107 LEU n 1 108 GLN n 1 109 MET n 1 110 GLU n 1 111 HIS n 1 112 VAL n 1 113 VAL n 1 114 ASP n 1 115 THR n 1 116 CYS n 1 117 ARG n 1 118 LYS n 1 119 PHE n 1 120 ILE n 1 121 LYS n 1 122 ALA n 1 123 SER n 1 124 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 124 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCL6, BCL5, LAZ3, ZBTB27, ZNF51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BCL6_HUMAN _struct_ref.pdbx_db_accession P41182 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCI LLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _struct_ref.pdbx_align_begin 6 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6EW8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P41182 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6EW8 GLN A 3 ? UNP P41182 CYS 8 conflict 8 1 1 6EW8 ARG A 62 ? UNP P41182 CYS 67 conflict 67 2 1 6EW8 ASN A 79 ? UNP P41182 CYS 84 conflict 84 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C0Q non-polymer . 'anilinopyrimidine ligand' ? 'C21 H25 Cl N6 O3' 444.915 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6EW8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 310 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details unknown _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6EW8 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.51 _reflns.d_resolution_high 1.84 _reflns.number_obs 8260 _reflns.number_all ? _reflns.percent_possible_obs 82.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.9 _reflns.B_iso_Wilson_estimate 25.93 _reflns.pdbx_redundancy 3.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.84 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 34.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.4 _reflns_shell.pdbx_redundancy 2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6EW8 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8260 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.51 _refine.ls_d_res_high 1.84 _refine.ls_percent_reflns_obs 82.3 _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error 0.000 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.150 _refine.ls_number_reflns_R_free 425 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 29.55 _refine.aniso_B[1][1] 3.39670 _refine.aniso_B[2][2] 0.42820 _refine.aniso_B[3][3] -3.82490 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 3.45430 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.199 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.177 _refine.pdbx_overall_SU_R_Blow_DPI 0.208 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.180 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 6EW8 _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 993 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 1125 _refine_hist.d_res_high 1.84 _refine_hist.d_res_low 36.51 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 1080 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.07 ? 2.00 1490 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 400 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 26 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 157 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 1080 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 2.75 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 17.41 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 140 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 1375 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.d_res_high 1.84 _refine_ls_shell.d_res_low 2.06 _refine_ls_shell.number_reflns_R_work 1289 _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.percent_reflns_obs 48.02 _refine_ls_shell.R_factor_R_free 0.320 _refine_ls_shell.R_factor_R_free_error 0.000 _refine_ls_shell.percent_reflns_R_free 5.29 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all 1361 _refine_ls_shell.R_factor_all 0.222 # _struct.entry_id 6EW8 _struct.title 'Crystal structure of the BCL6 BTB domain in complex with anilinopyrimidine ligand' _struct.pdbx_descriptor 'B-cell lymphoma 6 protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6EW8 _struct_keywords.text 'KINASE, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 8 ? ASP A 24 ? ARG A 13 ASP A 29 1 ? 17 HELX_P HELX_P2 AA2 HIS A 41 ? SER A 49 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 AA3 SER A 49 ? ASP A 58 ? SER A 54 ASP A 63 1 ? 10 HELX_P HELX_P4 AA4 ASN A 74 ? SER A 88 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P5 AA5 ASN A 96 ? GLN A 108 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P6 AA6 MET A 109 ? SER A 123 ? MET A 114 SER A 128 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 36 ? ALA A 40 ? GLU A 41 ALA A 45 AA1 2 VAL A 29 ? VAL A 33 ? VAL A 34 VAL A 38 AA1 3 VAL A 66 ? ASN A 68 ? VAL A 71 ASN A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 36 ? O GLU A 41 N VAL A 33 ? N VAL A 38 AA1 2 3 N VAL A 32 ? N VAL A 37 O ILE A 67 ? O ILE A 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 4 'binding site for residue CL A 201' AC2 Software A C0Q 202 ? 12 'binding site for residue C0Q A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 MET A 109 ? MET A 114 . ? 1_555 ? 2 AC1 4 HIS A 111 ? HIS A 116 . ? 1_555 ? 3 AC1 4 VAL A 112 ? VAL A 117 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 344 . ? 1_555 ? 5 AC2 12 ASN A 16 ? ASN A 21 . ? 2_554 ? 6 AC2 12 ARG A 19 ? ARG A 24 . ? 2_554 ? 7 AC2 12 MET A 46 ? MET A 51 . ? 1_555 ? 8 AC2 12 ALA A 47 ? ALA A 52 . ? 1_555 ? 9 AC2 12 CYS A 48 ? CYS A 53 . ? 1_555 ? 10 AC2 12 GLY A 50 ? GLY A 55 . ? 1_555 ? 11 AC2 12 TYR A 53 ? TYR A 58 . ? 1_555 ? 12 AC2 12 GLU A 76 ? GLU A 81 . ? 1_655 ? 13 AC2 12 ASN A 79 ? ASN A 84 . ? 1_655 ? 14 AC2 12 GLN A 108 ? GLN A 113 . ? 1_555 ? 15 AC2 12 GLU A 110 ? GLU A 115 . ? 1_555 ? 16 AC2 12 HOH D . ? HOH A 357 . ? 1_555 ? # _atom_sites.entry_id 6EW8 _atom_sites.fract_transf_matrix[1][1] 0.032607 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008463 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013695 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019134 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 6 6 ASP ASP A . n A 1 2 SER 2 7 7 SER SER A . n A 1 3 GLN 3 8 8 GLN GLN A . n A 1 4 ILE 4 9 9 ILE ILE A . n A 1 5 GLN 5 10 10 GLN GLN A . n A 1 6 PHE 6 11 11 PHE PHE A . n A 1 7 THR 7 12 12 THR THR A . n A 1 8 ARG 8 13 13 ARG ARG A . n A 1 9 HIS 9 14 14 HIS HIS A . n A 1 10 ALA 10 15 15 ALA ALA A . n A 1 11 SER 11 16 16 SER SER A . n A 1 12 ASP 12 17 17 ASP ASP A . n A 1 13 VAL 13 18 18 VAL VAL A . n A 1 14 LEU 14 19 19 LEU LEU A . n A 1 15 LEU 15 20 20 LEU LEU A . n A 1 16 ASN 16 21 21 ASN ASN A . n A 1 17 LEU 17 22 22 LEU LEU A . n A 1 18 ASN 18 23 23 ASN ASN A . n A 1 19 ARG 19 24 24 ARG ARG A . n A 1 20 LEU 20 25 25 LEU LEU A . n A 1 21 ARG 21 26 26 ARG ARG A . n A 1 22 SER 22 27 27 SER SER A . n A 1 23 ARG 23 28 28 ARG ARG A . n A 1 24 ASP 24 29 29 ASP ASP A . n A 1 25 ILE 25 30 30 ILE ILE A . n A 1 26 LEU 26 31 31 LEU LEU A . n A 1 27 THR 27 32 32 THR THR A . n A 1 28 ASP 28 33 33 ASP ASP A . n A 1 29 VAL 29 34 34 VAL VAL A . n A 1 30 VAL 30 35 35 VAL VAL A . n A 1 31 ILE 31 36 36 ILE ILE A . n A 1 32 VAL 32 37 37 VAL VAL A . n A 1 33 VAL 33 38 38 VAL VAL A . n A 1 34 SER 34 39 39 SER SER A . n A 1 35 ARG 35 40 40 ARG ARG A . n A 1 36 GLU 36 41 41 GLU GLU A . n A 1 37 GLN 37 42 42 GLN GLN A . n A 1 38 PHE 38 43 43 PHE PHE A . n A 1 39 ARG 39 44 44 ARG ARG A . n A 1 40 ALA 40 45 45 ALA ALA A . n A 1 41 HIS 41 46 46 HIS HIS A . n A 1 42 LYS 42 47 47 LYS LYS A . n A 1 43 THR 43 48 48 THR THR A . n A 1 44 VAL 44 49 49 VAL VAL A . n A 1 45 LEU 45 50 50 LEU LEU A . n A 1 46 MET 46 51 51 MET MET A . n A 1 47 ALA 47 52 52 ALA ALA A . n A 1 48 CYS 48 53 53 CYS CYS A . n A 1 49 SER 49 54 54 SER SER A . n A 1 50 GLY 50 55 55 GLY GLY A . n A 1 51 LEU 51 56 56 LEU LEU A . n A 1 52 PHE 52 57 57 PHE PHE A . n A 1 53 TYR 53 58 58 TYR TYR A . n A 1 54 SER 54 59 59 SER SER A . n A 1 55 ILE 55 60 60 ILE ILE A . n A 1 56 PHE 56 61 61 PHE PHE A . n A 1 57 THR 57 62 62 THR THR A . n A 1 58 ASP 58 63 63 ASP ASP A . n A 1 59 GLN 59 64 64 GLN GLN A . n A 1 60 LEU 60 65 65 LEU LEU A . n A 1 61 LYS 61 66 66 LYS LYS A . n A 1 62 ARG 62 67 67 ARG ARG A . n A 1 63 ASN 63 68 68 ASN ASN A . n A 1 64 LEU 64 69 69 LEU LEU A . n A 1 65 SER 65 70 70 SER SER A . n A 1 66 VAL 66 71 71 VAL VAL A . n A 1 67 ILE 67 72 72 ILE ILE A . n A 1 68 ASN 68 73 73 ASN ASN A . n A 1 69 LEU 69 74 74 LEU LEU A . n A 1 70 ASP 70 75 75 ASP ASP A . n A 1 71 PRO 71 76 76 PRO PRO A . n A 1 72 GLU 72 77 77 GLU GLU A . n A 1 73 ILE 73 78 78 ILE ILE A . n A 1 74 ASN 74 79 79 ASN ASN A . n A 1 75 PRO 75 80 80 PRO PRO A . n A 1 76 GLU 76 81 81 GLU GLU A . n A 1 77 GLY 77 82 82 GLY GLY A . n A 1 78 PHE 78 83 83 PHE PHE A . n A 1 79 ASN 79 84 84 ASN ASN A . n A 1 80 ILE 80 85 85 ILE ILE A . n A 1 81 LEU 81 86 86 LEU LEU A . n A 1 82 LEU 82 87 87 LEU LEU A . n A 1 83 ASP 83 88 88 ASP ASP A . n A 1 84 PHE 84 89 89 PHE PHE A . n A 1 85 MET 85 90 90 MET MET A . n A 1 86 TYR 86 91 91 TYR TYR A . n A 1 87 THR 87 92 92 THR THR A . n A 1 88 SER 88 93 93 SER SER A . n A 1 89 ARG 89 94 94 ARG ARG A . n A 1 90 LEU 90 95 95 LEU LEU A . n A 1 91 ASN 91 96 96 ASN ASN A . n A 1 92 LEU 92 97 97 LEU LEU A . n A 1 93 ARG 93 98 98 ARG ARG A . n A 1 94 GLU 94 99 99 GLU GLU A . n A 1 95 GLY 95 100 100 GLY GLY A . n A 1 96 ASN 96 101 101 ASN ASN A . n A 1 97 ILE 97 102 102 ILE ILE A . n A 1 98 MET 98 103 103 MET MET A . n A 1 99 ALA 99 104 104 ALA ALA A . n A 1 100 VAL 100 105 105 VAL VAL A . n A 1 101 MET 101 106 106 MET MET A . n A 1 102 ALA 102 107 107 ALA ALA A . n A 1 103 THR 103 108 108 THR THR A . n A 1 104 ALA 104 109 109 ALA ALA A . n A 1 105 MET 105 110 110 MET MET A . n A 1 106 TYR 106 111 111 TYR TYR A . n A 1 107 LEU 107 112 112 LEU LEU A . n A 1 108 GLN 108 113 113 GLN GLN A . n A 1 109 MET 109 114 114 MET MET A . n A 1 110 GLU 110 115 115 GLU GLU A . n A 1 111 HIS 111 116 116 HIS HIS A . n A 1 112 VAL 112 117 117 VAL VAL A . n A 1 113 VAL 113 118 118 VAL VAL A . n A 1 114 ASP 114 119 119 ASP ASP A . n A 1 115 THR 115 120 120 THR THR A . n A 1 116 CYS 116 121 121 CYS CYS A . n A 1 117 ARG 117 122 122 ARG ARG A . n A 1 118 LYS 118 123 123 LYS LYS A . n A 1 119 PHE 119 124 124 PHE PHE A . n A 1 120 ILE 120 125 125 ILE ILE A . n A 1 121 LYS 121 126 126 LYS LYS A . n A 1 122 ALA 122 127 127 ALA ALA A . n A 1 123 SER 123 128 128 SER SER A . n A 1 124 GLU 124 129 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL A . C 3 C0Q 1 202 1 C0Q INH A . D 4 HOH 1 301 37 HOH HOH A . D 4 HOH 2 302 31 HOH HOH A . D 4 HOH 3 303 6 HOH HOH A . D 4 HOH 4 304 85 HOH HOH A . D 4 HOH 5 305 96 HOH HOH A . D 4 HOH 6 306 73 HOH HOH A . D 4 HOH 7 307 91 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 28 HOH HOH A . D 4 HOH 10 310 21 HOH HOH A . D 4 HOH 11 311 89 HOH HOH A . D 4 HOH 12 312 80 HOH HOH A . D 4 HOH 13 313 1 HOH HOH A . D 4 HOH 14 314 71 HOH HOH A . D 4 HOH 15 315 19 HOH HOH A . D 4 HOH 16 316 54 HOH HOH A . D 4 HOH 17 317 75 HOH HOH A . D 4 HOH 18 318 52 HOH HOH A . D 4 HOH 19 319 12 HOH HOH A . D 4 HOH 20 320 40 HOH HOH A . D 4 HOH 21 321 15 HOH HOH A . D 4 HOH 22 322 67 HOH HOH A . D 4 HOH 23 323 41 HOH HOH A . D 4 HOH 24 324 36 HOH HOH A . D 4 HOH 25 325 14 HOH HOH A . D 4 HOH 26 326 39 HOH HOH A . D 4 HOH 27 327 93 HOH HOH A . D 4 HOH 28 328 49 HOH HOH A . D 4 HOH 29 329 43 HOH HOH A . D 4 HOH 30 330 84 HOH HOH A . D 4 HOH 31 331 18 HOH HOH A . D 4 HOH 32 332 46 HOH HOH A . D 4 HOH 33 333 10 HOH HOH A . D 4 HOH 34 334 98 HOH HOH A . D 4 HOH 35 335 25 HOH HOH A . D 4 HOH 36 336 3 HOH HOH A . D 4 HOH 37 337 2 HOH HOH A . D 4 HOH 38 338 24 HOH HOH A . D 4 HOH 39 339 4 HOH HOH A . D 4 HOH 40 340 55 HOH HOH A . D 4 HOH 41 341 65 HOH HOH A . D 4 HOH 42 342 50 HOH HOH A . D 4 HOH 43 343 35 HOH HOH A . D 4 HOH 44 344 11 HOH HOH A . D 4 HOH 45 345 42 HOH HOH A . D 4 HOH 46 346 72 HOH HOH A . D 4 HOH 47 347 76 HOH HOH A . D 4 HOH 48 348 59 HOH HOH A . D 4 HOH 49 349 95 HOH HOH A . D 4 HOH 50 350 45 HOH HOH A . D 4 HOH 51 351 87 HOH HOH A . D 4 HOH 52 352 66 HOH HOH A . D 4 HOH 53 353 23 HOH HOH A . D 4 HOH 54 354 97 HOH HOH A . D 4 HOH 55 355 88 HOH HOH A . D 4 HOH 56 356 34 HOH HOH A . D 4 HOH 57 357 56 HOH HOH A . D 4 HOH 58 358 53 HOH HOH A . D 4 HOH 59 359 33 HOH HOH A . D 4 HOH 60 360 9 HOH HOH A . D 4 HOH 61 361 92 HOH HOH A . D 4 HOH 62 362 20 HOH HOH A . D 4 HOH 63 363 27 HOH HOH A . D 4 HOH 64 364 82 HOH HOH A . D 4 HOH 65 365 81 HOH HOH A . D 4 HOH 66 366 13 HOH HOH A . D 4 HOH 67 367 38 HOH HOH A . D 4 HOH 68 368 51 HOH HOH A . D 4 HOH 69 369 44 HOH HOH A . D 4 HOH 70 370 83 HOH HOH A . D 4 HOH 71 371 78 HOH HOH A . D 4 HOH 72 372 94 HOH HOH A . D 4 HOH 73 373 58 HOH HOH A . D 4 HOH 74 374 26 HOH HOH A . D 4 HOH 75 375 62 HOH HOH A . D 4 HOH 76 376 60 HOH HOH A . D 4 HOH 77 377 61 HOH HOH A . D 4 HOH 78 378 22 HOH HOH A . D 4 HOH 79 379 101 HOH HOH A . D 4 HOH 80 380 86 HOH HOH A . D 4 HOH 81 381 63 HOH HOH A . D 4 HOH 82 382 32 HOH HOH A . D 4 HOH 83 383 29 HOH HOH A . D 4 HOH 84 384 77 HOH HOH A . D 4 HOH 85 385 17 HOH HOH A . D 4 HOH 86 386 57 HOH HOH A . D 4 HOH 87 387 5 HOH HOH A . D 4 HOH 88 388 64 HOH HOH A . D 4 HOH 89 389 16 HOH HOH A . D 4 HOH 90 390 90 HOH HOH A . D 4 HOH 91 391 99 HOH HOH A . D 4 HOH 92 392 69 HOH HOH A . D 4 HOH 93 393 79 HOH HOH A . D 4 HOH 94 394 47 HOH HOH A . D 4 HOH 95 395 70 HOH HOH A . D 4 HOH 96 396 30 HOH HOH A . D 4 HOH 97 397 100 HOH HOH A . D 4 HOH 98 398 68 HOH HOH A . D 4 HOH 99 399 74 HOH HOH A . D 4 HOH 100 400 48 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4340 ? 1 MORE -54 ? 1 'SSA (A^2)' 13050 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1.0000000000 0.0000000000 0.0000000000 13.5648818238 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -52.2633141516 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 327 ? D HOH . 2 1 A HOH 354 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-24 2 'Structure model' 1 1 2018-10-31 3 'Structure model' 1 2 2018-11-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 3 'Structure model' pdbx_database_proc # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 3 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.6 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? -141.17 13.34 2 1 SER A 39 ? ? 56.04 -112.49 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 129 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLU _pdbx_unobs_or_zero_occ_residues.label_seq_id 124 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'anilinopyrimidine ligand' C0Q 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #