data_6EWY # _entry.id 6EWY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.299 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6EWY WWPDB D_1200007386 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6EWY _pdbx_database_status.recvd_initial_deposition_date 2017-11-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Schnell, R.' 1 ? 'Steiner, E.M.' 2 ? 'Schneider, G.' 3 ? 'Guy, J.' 4 ? 'Bourenkov, G.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proteins _citation.journal_id_ASTM PSFGEY _citation.journal_id_CSD 0867 _citation.journal_id_ISSN 1097-0134 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 86 _citation.language ? _citation.page_first 912 _citation.page_last 923 _citation.title 'The structure of the N-terminal module of the cell wall hydrolase RipA and its role in regulating catalytic activity.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/prot.25523 _citation.pdbx_database_id_PubMed 29722065 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Steiner, E.M.' 1 ? primary 'Lyngso, J.' 2 ? primary 'Guy, J.E.' 3 ? primary 'Bourenkov, G.' 4 ? primary 'Lindqvist, Y.' 5 ? primary 'Schneider, T.R.' 6 ? primary 'Pedersen, J.S.' 7 ? primary 'Schneider, G.' 8 ? primary 'Schnell, R.' 9 0000-0001-7530-3629 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6EWY _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.916 _cell.length_a_esd ? _cell.length_b 93.960 _cell.length_b_esd ? _cell.length_c 138.672 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EWY _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidoglycan endopeptidase RipA' 23274.570 1 3.4.-.- ? ? 'RipA-N-terminal domain' 2 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Macrophage invasion and intracellular persistence protein A,Resuscitation-promoting factor interaction partner A,Rpf-interacting protein A ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMADPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRF DTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDA AVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSEGGQGAPPFRMWDPGS ; _entity_poly.pdbx_seq_one_letter_code_can ;SMADPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRF DTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDA AVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSEGGQGAPPFRMWDPGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 ASP n 1 5 PRO n 1 6 GLN n 1 7 THR n 1 8 ASP n 1 9 THR n 1 10 ILE n 1 11 ALA n 1 12 ALA n 1 13 LEU n 1 14 ILE n 1 15 ALA n 1 16 ASP n 1 17 VAL n 1 18 ALA n 1 19 LYS n 1 20 ALA n 1 21 ASN n 1 22 GLN n 1 23 ARG n 1 24 LEU n 1 25 GLN n 1 26 ASP n 1 27 LEU n 1 28 SER n 1 29 ASP n 1 30 GLU n 1 31 VAL n 1 32 GLN n 1 33 ALA n 1 34 GLU n 1 35 GLN n 1 36 GLU n 1 37 SER n 1 38 VAL n 1 39 ASN n 1 40 LYS n 1 41 ALA n 1 42 MET n 1 43 VAL n 1 44 ASP n 1 45 VAL n 1 46 GLU n 1 47 THR n 1 48 ALA n 1 49 ARG n 1 50 ASP n 1 51 ASN n 1 52 ALA n 1 53 ALA n 1 54 ALA n 1 55 ALA n 1 56 GLU n 1 57 ASP n 1 58 ASP n 1 59 LEU n 1 60 GLU n 1 61 VAL n 1 62 SER n 1 63 GLN n 1 64 ARG n 1 65 ALA n 1 66 VAL n 1 67 LYS n 1 68 ASP n 1 69 ALA n 1 70 ASN n 1 71 ALA n 1 72 ALA n 1 73 ILE n 1 74 ALA n 1 75 ALA n 1 76 ALA n 1 77 GLN n 1 78 HIS n 1 79 ARG n 1 80 PHE n 1 81 ASP n 1 82 THR n 1 83 PHE n 1 84 ALA n 1 85 ALA n 1 86 ALA n 1 87 THR n 1 88 TYR n 1 89 MET n 1 90 ASN n 1 91 GLY n 1 92 PRO n 1 93 SER n 1 94 VAL n 1 95 SER n 1 96 TYR n 1 97 LEU n 1 98 SER n 1 99 ALA n 1 100 SER n 1 101 SER n 1 102 PRO n 1 103 ASP n 1 104 GLU n 1 105 ILE n 1 106 ILE n 1 107 ALA n 1 108 THR n 1 109 VAL n 1 110 THR n 1 111 ALA n 1 112 ALA n 1 113 LYS n 1 114 THR n 1 115 LEU n 1 116 SER n 1 117 ALA n 1 118 SER n 1 119 SER n 1 120 GLN n 1 121 ALA n 1 122 VAL n 1 123 MET n 1 124 ALA n 1 125 ASN n 1 126 LEU n 1 127 GLN n 1 128 ARG n 1 129 ALA n 1 130 ARG n 1 131 THR n 1 132 GLU n 1 133 ARG n 1 134 VAL n 1 135 ASN n 1 136 THR n 1 137 GLU n 1 138 SER n 1 139 ALA n 1 140 ALA n 1 141 ARG n 1 142 LEU n 1 143 ALA n 1 144 LYS n 1 145 GLN n 1 146 LYS n 1 147 ALA n 1 148 ASP n 1 149 LYS n 1 150 ALA n 1 151 ALA n 1 152 ALA n 1 153 ASP n 1 154 ALA n 1 155 LYS n 1 156 ALA n 1 157 SER n 1 158 GLN n 1 159 ASP n 1 160 ALA n 1 161 ALA n 1 162 VAL n 1 163 ALA n 1 164 ALA n 1 165 LEU n 1 166 THR n 1 167 GLU n 1 168 THR n 1 169 ARG n 1 170 ARG n 1 171 LYS n 1 172 PHE n 1 173 ASP n 1 174 GLU n 1 175 GLN n 1 176 ARG n 1 177 GLU n 1 178 GLU n 1 179 VAL n 1 180 GLN n 1 181 ARG n 1 182 LEU n 1 183 ALA n 1 184 ALA n 1 185 GLU n 1 186 ARG n 1 187 ASP n 1 188 ALA n 1 189 ALA n 1 190 GLN n 1 191 ALA n 1 192 ARG n 1 193 LEU n 1 194 GLN n 1 195 ALA n 1 196 ALA n 1 197 ARG n 1 198 LEU n 1 199 VAL n 1 200 ALA n 1 201 TRP n 1 202 SER n 1 203 SER n 1 204 GLU n 1 205 GLY n 1 206 GLY n 1 207 GLN n 1 208 GLY n 1 209 ALA n 1 210 PRO n 1 211 PRO n 1 212 PHE n 1 213 ARG n 1 214 MET n 1 215 TRP n 1 216 ASP n 1 217 PRO n 1 218 GLY n 1 219 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 219 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ripA, Rv1477' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details 'N-terminal His6-tag, removable by TEV cleavage' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RIPA_MYCTU _struct_ref.pdbx_db_accession O53168 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDT FAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAV AALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSEGGQGAPPFRMWDPGS ; _struct_ref.pdbx_align_begin 39 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6EWY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 219 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O53168 _struct_ref_seq.db_align_beg 39 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 255 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 39 _struct_ref_seq.pdbx_auth_seq_align_end 255 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6EWY SER A 1 ? UNP O53168 ? ? 'expression tag' 37 1 1 6EWY MET A 2 ? UNP O53168 ? ? 'expression tag' 38 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6EWY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 0.61 _exptl_crystal.description rod _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.75 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '42% MPD, 0.1M MES pH 5.75' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (1 1 1)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97625 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 67.94 _reflns.entry_id 6EWY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.191 _reflns.d_resolution_low 34.987 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12284 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 4.0 _reflns.percent_possible_obs 90.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.8 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.062 _reflns.pdbx_Rpim_I_all 0.026 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.191 _reflns_shell.d_res_low 2.270 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 614 _reflns_shell.percent_possible_all 87.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.381 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.420 _reflns_shell.pdbx_Rpim_I_all 0.174 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.946 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 32.2 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6EWY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 34.987 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12226 _refine.ls_number_reflns_R_free 627 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 79.54 _refine.ls_percent_reflns_R_free 5.13 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2303 _refine.ls_R_factor_R_free 0.2667 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2283 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.51 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.26 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1498 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 1596 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 34.987 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1508 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.913 ? 2043 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 15.139 ? 556 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.032 ? 243 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 278 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2001 2.4214 . . 89 1641 46.00 . . . 0.3139 . 0.25 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4214 2.7717 . . 141 2715 75.00 . . . 0.3089 . 0.2555 . . . . . . . . . . # _struct.entry_id 6EWY _struct.title 'RipA Peptidoglycan hydrolase (Rv1477, Mycobacterium tuberculosis) N-terminal domain' _struct.pdbx_descriptor 'Peptidoglycan endopeptidase RipA (E.C.3.4.-.-)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6EWY _struct_keywords.text 'Periplasmic protein, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 8 ? ASN A 90 ? ASP A 44 ASN A 126 1 ? 83 HELX_P HELX_P2 AA2 SER A 101 ? SER A 202 ? SER A 137 SER A 238 1 ? 102 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 6EWY _atom_sites.fract_transf_matrix[1][1] 0.022264 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010643 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007211 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 37 ? ? ? A . n A 1 2 MET 2 38 ? ? ? A . n A 1 3 ALA 3 39 ? ? ? A . n A 1 4 ASP 4 40 40 ASP ASP A . n A 1 5 PRO 5 41 41 PRO PRO A . n A 1 6 GLN 6 42 42 GLN GLN A . n A 1 7 THR 7 43 43 THR THR A . n A 1 8 ASP 8 44 44 ASP ASP A . n A 1 9 THR 9 45 45 THR THR A . n A 1 10 ILE 10 46 46 ILE ILE A . n A 1 11 ALA 11 47 47 ALA ALA A . n A 1 12 ALA 12 48 48 ALA ALA A . n A 1 13 LEU 13 49 49 LEU LEU A . n A 1 14 ILE 14 50 50 ILE ILE A . n A 1 15 ALA 15 51 51 ALA ALA A . n A 1 16 ASP 16 52 52 ASP ASP A . n A 1 17 VAL 17 53 53 VAL VAL A . n A 1 18 ALA 18 54 54 ALA ALA A . n A 1 19 LYS 19 55 55 LYS LYS A . n A 1 20 ALA 20 56 56 ALA ALA A . n A 1 21 ASN 21 57 57 ASN ASN A . n A 1 22 GLN 22 58 58 GLN GLN A . n A 1 23 ARG 23 59 59 ARG ARG A . n A 1 24 LEU 24 60 60 LEU LEU A . n A 1 25 GLN 25 61 61 GLN GLN A . n A 1 26 ASP 26 62 62 ASP ASP A . n A 1 27 LEU 27 63 63 LEU LEU A . n A 1 28 SER 28 64 64 SER SER A . n A 1 29 ASP 29 65 65 ASP ASP A . n A 1 30 GLU 30 66 66 GLU GLU A . n A 1 31 VAL 31 67 67 VAL VAL A . n A 1 32 GLN 32 68 68 GLN GLN A . n A 1 33 ALA 33 69 69 ALA ALA A . n A 1 34 GLU 34 70 70 GLU GLU A . n A 1 35 GLN 35 71 71 GLN GLN A . n A 1 36 GLU 36 72 72 GLU GLU A . n A 1 37 SER 37 73 73 SER SER A . n A 1 38 VAL 38 74 74 VAL VAL A . n A 1 39 ASN 39 75 75 ASN ASN A . n A 1 40 LYS 40 76 76 LYS LYS A . n A 1 41 ALA 41 77 77 ALA ALA A . n A 1 42 MET 42 78 78 MET MET A . n A 1 43 VAL 43 79 79 VAL VAL A . n A 1 44 ASP 44 80 80 ASP ASP A . n A 1 45 VAL 45 81 81 VAL VAL A . n A 1 46 GLU 46 82 82 GLU GLU A . n A 1 47 THR 47 83 83 THR THR A . n A 1 48 ALA 48 84 84 ALA ALA A . n A 1 49 ARG 49 85 85 ARG ARG A . n A 1 50 ASP 50 86 86 ASP ASP A . n A 1 51 ASN 51 87 87 ASN ASN A . n A 1 52 ALA 52 88 88 ALA ALA A . n A 1 53 ALA 53 89 89 ALA ALA A . n A 1 54 ALA 54 90 90 ALA ALA A . n A 1 55 ALA 55 91 91 ALA ALA A . n A 1 56 GLU 56 92 92 GLU GLU A . n A 1 57 ASP 57 93 93 ASP ASP A . n A 1 58 ASP 58 94 94 ASP ASP A . n A 1 59 LEU 59 95 95 LEU LEU A . n A 1 60 GLU 60 96 96 GLU GLU A . n A 1 61 VAL 61 97 97 VAL VAL A . n A 1 62 SER 62 98 98 SER SER A . n A 1 63 GLN 63 99 99 GLN GLN A . n A 1 64 ARG 64 100 100 ARG ARG A . n A 1 65 ALA 65 101 101 ALA ALA A . n A 1 66 VAL 66 102 102 VAL VAL A . n A 1 67 LYS 67 103 103 LYS LYS A . n A 1 68 ASP 68 104 104 ASP ASP A . n A 1 69 ALA 69 105 105 ALA ALA A . n A 1 70 ASN 70 106 106 ASN ASN A . n A 1 71 ALA 71 107 107 ALA ALA A . n A 1 72 ALA 72 108 108 ALA ALA A . n A 1 73 ILE 73 109 109 ILE ILE A . n A 1 74 ALA 74 110 110 ALA ALA A . n A 1 75 ALA 75 111 111 ALA ALA A . n A 1 76 ALA 76 112 112 ALA ALA A . n A 1 77 GLN 77 113 113 GLN GLN A . n A 1 78 HIS 78 114 114 HIS HIS A . n A 1 79 ARG 79 115 115 ARG ARG A . n A 1 80 PHE 80 116 116 PHE PHE A . n A 1 81 ASP 81 117 117 ASP ASP A . n A 1 82 THR 82 118 118 THR THR A . n A 1 83 PHE 83 119 119 PHE PHE A . n A 1 84 ALA 84 120 120 ALA ALA A . n A 1 85 ALA 85 121 121 ALA ALA A . n A 1 86 ALA 86 122 122 ALA ALA A . n A 1 87 THR 87 123 123 THR THR A . n A 1 88 TYR 88 124 124 TYR TYR A . n A 1 89 MET 89 125 125 MET MET A . n A 1 90 ASN 90 126 126 ASN ASN A . n A 1 91 GLY 91 127 127 GLY GLY A . n A 1 92 PRO 92 128 128 PRO PRO A . n A 1 93 SER 93 129 129 SER SER A . n A 1 94 VAL 94 130 130 VAL VAL A . n A 1 95 SER 95 131 131 SER SER A . n A 1 96 TYR 96 132 132 TYR TYR A . n A 1 97 LEU 97 133 133 LEU LEU A . n A 1 98 SER 98 134 134 SER SER A . n A 1 99 ALA 99 135 135 ALA ALA A . n A 1 100 SER 100 136 136 SER SER A . n A 1 101 SER 101 137 137 SER SER A . n A 1 102 PRO 102 138 138 PRO PRO A . n A 1 103 ASP 103 139 139 ASP ASP A . n A 1 104 GLU 104 140 140 GLU GLU A . n A 1 105 ILE 105 141 141 ILE ILE A . n A 1 106 ILE 106 142 142 ILE ILE A . n A 1 107 ALA 107 143 143 ALA ALA A . n A 1 108 THR 108 144 144 THR THR A . n A 1 109 VAL 109 145 145 VAL VAL A . n A 1 110 THR 110 146 146 THR THR A . n A 1 111 ALA 111 147 147 ALA ALA A . n A 1 112 ALA 112 148 148 ALA ALA A . n A 1 113 LYS 113 149 149 LYS LYS A . n A 1 114 THR 114 150 150 THR THR A . n A 1 115 LEU 115 151 151 LEU LEU A . n A 1 116 SER 116 152 152 SER SER A . n A 1 117 ALA 117 153 153 ALA ALA A . n A 1 118 SER 118 154 154 SER SER A . n A 1 119 SER 119 155 155 SER SER A . n A 1 120 GLN 120 156 156 GLN GLN A . n A 1 121 ALA 121 157 157 ALA ALA A . n A 1 122 VAL 122 158 158 VAL VAL A . n A 1 123 MET 123 159 159 MET MET A . n A 1 124 ALA 124 160 160 ALA ALA A . n A 1 125 ASN 125 161 161 ASN ASN A . n A 1 126 LEU 126 162 162 LEU LEU A . n A 1 127 GLN 127 163 163 GLN GLN A . n A 1 128 ARG 128 164 164 ARG ARG A . n A 1 129 ALA 129 165 165 ALA ALA A . n A 1 130 ARG 130 166 166 ARG ARG A . n A 1 131 THR 131 167 167 THR THR A . n A 1 132 GLU 132 168 168 GLU GLU A . n A 1 133 ARG 133 169 169 ARG ARG A . n A 1 134 VAL 134 170 170 VAL VAL A . n A 1 135 ASN 135 171 171 ASN ASN A . n A 1 136 THR 136 172 172 THR THR A . n A 1 137 GLU 137 173 173 GLU GLU A . n A 1 138 SER 138 174 174 SER SER A . n A 1 139 ALA 139 175 175 ALA ALA A . n A 1 140 ALA 140 176 176 ALA ALA A . n A 1 141 ARG 141 177 177 ARG ARG A . n A 1 142 LEU 142 178 178 LEU LEU A . n A 1 143 ALA 143 179 179 ALA ALA A . n A 1 144 LYS 144 180 180 LYS LYS A . n A 1 145 GLN 145 181 181 GLN GLN A . n A 1 146 LYS 146 182 182 LYS LYS A . n A 1 147 ALA 147 183 183 ALA ALA A . n A 1 148 ASP 148 184 184 ASP ASP A . n A 1 149 LYS 149 185 185 LYS LYS A . n A 1 150 ALA 150 186 186 ALA ALA A . n A 1 151 ALA 151 187 187 ALA ALA A . n A 1 152 ALA 152 188 188 ALA ALA A . n A 1 153 ASP 153 189 189 ASP ASP A . n A 1 154 ALA 154 190 190 ALA ALA A . n A 1 155 LYS 155 191 191 LYS LYS A . n A 1 156 ALA 156 192 192 ALA ALA A . n A 1 157 SER 157 193 193 SER SER A . n A 1 158 GLN 158 194 194 GLN GLN A . n A 1 159 ASP 159 195 195 ASP ASP A . n A 1 160 ALA 160 196 196 ALA ALA A . n A 1 161 ALA 161 197 197 ALA ALA A . n A 1 162 VAL 162 198 198 VAL VAL A . n A 1 163 ALA 163 199 199 ALA ALA A . n A 1 164 ALA 164 200 200 ALA ALA A . n A 1 165 LEU 165 201 201 LEU LEU A . n A 1 166 THR 166 202 202 THR THR A . n A 1 167 GLU 167 203 203 GLU GLU A . n A 1 168 THR 168 204 204 THR THR A . n A 1 169 ARG 169 205 205 ARG ARG A . n A 1 170 ARG 170 206 206 ARG ARG A . n A 1 171 LYS 171 207 207 LYS LYS A . n A 1 172 PHE 172 208 208 PHE PHE A . n A 1 173 ASP 173 209 209 ASP ASP A . n A 1 174 GLU 174 210 210 GLU GLU A . n A 1 175 GLN 175 211 211 GLN GLN A . n A 1 176 ARG 176 212 212 ARG ARG A . n A 1 177 GLU 177 213 213 GLU GLU A . n A 1 178 GLU 178 214 214 GLU GLU A . n A 1 179 VAL 179 215 215 VAL VAL A . n A 1 180 GLN 180 216 216 GLN GLN A . n A 1 181 ARG 181 217 217 ARG ARG A . n A 1 182 LEU 182 218 218 LEU LEU A . n A 1 183 ALA 183 219 219 ALA ALA A . n A 1 184 ALA 184 220 220 ALA ALA A . n A 1 185 GLU 185 221 221 GLU GLU A . n A 1 186 ARG 186 222 222 ARG ARG A . n A 1 187 ASP 187 223 223 ASP ASP A . n A 1 188 ALA 188 224 224 ALA ALA A . n A 1 189 ALA 189 225 225 ALA ALA A . n A 1 190 GLN 190 226 226 GLN GLN A . n A 1 191 ALA 191 227 227 ALA ALA A . n A 1 192 ARG 192 228 228 ARG ARG A . n A 1 193 LEU 193 229 229 LEU LEU A . n A 1 194 GLN 194 230 230 GLN GLN A . n A 1 195 ALA 195 231 231 ALA ALA A . n A 1 196 ALA 196 232 232 ALA ALA A . n A 1 197 ARG 197 233 233 ARG ARG A . n A 1 198 LEU 198 234 234 LEU LEU A . n A 1 199 VAL 199 235 235 VAL VAL A . n A 1 200 ALA 200 236 236 ALA ALA A . n A 1 201 TRP 201 237 237 TRP TRP A . n A 1 202 SER 202 238 238 SER SER A . n A 1 203 SER 203 239 239 SER SER A . n A 1 204 GLU 204 240 240 GLU GLU A . n A 1 205 GLY 205 241 ? ? ? A . n A 1 206 GLY 206 242 ? ? ? A . n A 1 207 GLN 207 243 ? ? ? A . n A 1 208 GLY 208 244 ? ? ? A . n A 1 209 ALA 209 245 ? ? ? A . n A 1 210 PRO 210 246 ? ? ? A . n A 1 211 PRO 211 247 ? ? ? A . n A 1 212 PHE 212 248 ? ? ? A . n A 1 213 ARG 213 249 ? ? ? A . n A 1 214 MET 214 250 ? ? ? A . n A 1 215 TRP 215 251 ? ? ? A . n A 1 216 ASP 216 252 ? ? ? A . n A 1 217 PRO 217 253 ? ? ? A . n A 1 218 GLY 218 254 ? ? ? A . n A 1 219 SER 219 255 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 50 HOH HOH A . B 2 HOH 2 302 25 HOH HOH A . B 2 HOH 3 303 51 HOH HOH A . B 2 HOH 4 304 57 HOH HOH A . B 2 HOH 5 305 4 HOH HOH A . B 2 HOH 6 306 10 HOH HOH A . B 2 HOH 7 307 35 HOH HOH A . B 2 HOH 8 308 54 HOH HOH A . B 2 HOH 9 309 30 HOH HOH A . B 2 HOH 10 310 95 HOH HOH A . B 2 HOH 11 311 24 HOH HOH A . B 2 HOH 12 312 61 HOH HOH A . B 2 HOH 13 313 5 HOH HOH A . B 2 HOH 14 314 8 HOH HOH A . B 2 HOH 15 315 28 HOH HOH A . B 2 HOH 16 316 22 HOH HOH A . B 2 HOH 17 317 6 HOH HOH A . B 2 HOH 18 318 12 HOH HOH A . B 2 HOH 19 319 26 HOH HOH A . B 2 HOH 20 320 19 HOH HOH A . B 2 HOH 21 321 13 HOH HOH A . B 2 HOH 22 322 63 HOH HOH A . B 2 HOH 23 323 76 HOH HOH A . B 2 HOH 24 324 18 HOH HOH A . B 2 HOH 25 325 2 HOH HOH A . B 2 HOH 26 326 74 HOH HOH A . B 2 HOH 27 327 21 HOH HOH A . B 2 HOH 28 328 90 HOH HOH A . B 2 HOH 29 329 66 HOH HOH A . B 2 HOH 30 330 38 HOH HOH A . B 2 HOH 31 331 27 HOH HOH A . B 2 HOH 32 332 14 HOH HOH A . B 2 HOH 33 333 70 HOH HOH A . B 2 HOH 34 334 23 HOH HOH A . B 2 HOH 35 335 1 HOH HOH A . B 2 HOH 36 336 56 HOH HOH A . B 2 HOH 37 337 15 HOH HOH A . B 2 HOH 38 338 53 HOH HOH A . B 2 HOH 39 339 9 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 36 HOH HOH A . B 2 HOH 42 342 43 HOH HOH A . B 2 HOH 43 343 31 HOH HOH A . B 2 HOH 44 344 29 HOH HOH A . B 2 HOH 45 345 11 HOH HOH A . B 2 HOH 46 346 86 HOH HOH A . B 2 HOH 47 347 34 HOH HOH A . B 2 HOH 48 348 83 HOH HOH A . B 2 HOH 49 349 82 HOH HOH A . B 2 HOH 50 350 59 HOH HOH A . B 2 HOH 51 351 32 HOH HOH A . B 2 HOH 52 352 69 HOH HOH A . B 2 HOH 53 353 46 HOH HOH A . B 2 HOH 54 354 39 HOH HOH A . B 2 HOH 55 355 7 HOH HOH A . B 2 HOH 56 356 97 HOH HOH A . B 2 HOH 57 357 17 HOH HOH A . B 2 HOH 58 358 3 HOH HOH A . B 2 HOH 59 359 78 HOH HOH A . B 2 HOH 60 360 62 HOH HOH A . B 2 HOH 61 361 16 HOH HOH A . B 2 HOH 62 362 93 HOH HOH A . B 2 HOH 63 363 67 HOH HOH A . B 2 HOH 64 364 41 HOH HOH A . B 2 HOH 65 365 20 HOH HOH A . B 2 HOH 66 366 85 HOH HOH A . B 2 HOH 67 367 58 HOH HOH A . B 2 HOH 68 368 45 HOH HOH A . B 2 HOH 69 369 55 HOH HOH A . B 2 HOH 70 370 33 HOH HOH A . B 2 HOH 71 371 89 HOH HOH A . B 2 HOH 72 372 80 HOH HOH A . B 2 HOH 73 373 37 HOH HOH A . B 2 HOH 74 374 79 HOH HOH A . B 2 HOH 75 375 52 HOH HOH A . B 2 HOH 76 376 81 HOH HOH A . B 2 HOH 77 377 42 HOH HOH A . B 2 HOH 78 378 48 HOH HOH A . B 2 HOH 79 379 49 HOH HOH A . B 2 HOH 80 380 71 HOH HOH A . B 2 HOH 81 381 72 HOH HOH A . B 2 HOH 82 382 91 HOH HOH A . B 2 HOH 83 383 73 HOH HOH A . B 2 HOH 84 384 87 HOH HOH A . B 2 HOH 85 385 64 HOH HOH A . B 2 HOH 86 386 88 HOH HOH A . B 2 HOH 87 387 77 HOH HOH A . B 2 HOH 88 388 75 HOH HOH A . B 2 HOH 89 389 47 HOH HOH A . B 2 HOH 90 390 92 HOH HOH A . B 2 HOH 91 391 65 HOH HOH A . B 2 HOH 92 392 44 HOH HOH A . B 2 HOH 93 393 84 HOH HOH A . B 2 HOH 94 394 96 HOH HOH A . B 2 HOH 95 395 94 HOH HOH A . B 2 HOH 96 396 68 HOH HOH A . B 2 HOH 97 397 98 HOH HOH A . B 2 HOH 98 398 60 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 13950 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-02 2 'Structure model' 1 1 2018-05-16 3 'Structure model' 1 2 2018-10-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation.title' 14 3 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? AutoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 117 ? ? O A HOH 301 ? ? 2.00 2 1 NZ A LYS 180 ? ? O A HOH 302 ? ? 2.04 3 1 O A HOH 313 ? ? O A HOH 370 ? ? 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 43 ? ? -59.18 -4.07 2 1 VAL A 130 ? ? -129.34 -87.83 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 40 ? CG ? A ASP 4 CG 2 1 Y 1 A ASP 40 ? OD1 ? A ASP 4 OD1 3 1 Y 1 A ASP 40 ? OD2 ? A ASP 4 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 37 ? A SER 1 2 1 Y 1 A MET 38 ? A MET 2 3 1 Y 1 A ALA 39 ? A ALA 3 4 1 Y 1 A GLY 241 ? A GLY 205 5 1 Y 1 A GLY 242 ? A GLY 206 6 1 Y 1 A GLN 243 ? A GLN 207 7 1 Y 1 A GLY 244 ? A GLY 208 8 1 Y 1 A ALA 245 ? A ALA 209 9 1 Y 1 A PRO 246 ? A PRO 210 10 1 Y 1 A PRO 247 ? A PRO 211 11 1 Y 1 A PHE 248 ? A PHE 212 12 1 Y 1 A ARG 249 ? A ARG 213 13 1 Y 1 A MET 250 ? A MET 214 14 1 Y 1 A TRP 251 ? A TRP 215 15 1 Y 1 A ASP 252 ? A ASP 216 16 1 Y 1 A PRO 253 ? A PRO 217 17 1 Y 1 A GLY 254 ? A GLY 218 18 1 Y 1 A SER 255 ? A SER 219 # _pdbx_audit_support.funding_organization RAC-VR _pdbx_audit_support.country Sweden _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' 'approximately a dimer size derived' 2 1 SAXS 'Monomer at pH 5, dimer at higher pH values, pH 6-8' #