HEADER TRANSFERASE 07-NOV-17 6EX0 TITLE CRYSTAL STRUCTURE OF RELP (SAS2) FROM STAPHYLOCOCCUS AUREUS BOUND TO TITLE 2 PPPGPP IN THE POST-CATALYTIC STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP PYROPHOSPHOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GTP PYROPHOSPHOKINASE YWAC,RELA/SPOT DOMAIN PROTEIN; COMPND 5 EC: 2.7.6.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: YWAC, AB454_12730, AB466_12625, AB478_12605, AB526_12980, SOURCE 5 AFO97_10970, AFP37_10975, EP54_00695, EQ90_03295, ERS072738_01254, SOURCE 6 ERS074020_00750, HMPREF3211_00175; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS STRINGENT RESPONSE, (P)PPGPP, PERSISTENCE, SMALL ALARMONE SYNTHETASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.MANAV,D.E.BRODERSEN REVDAT 4 17-JAN-24 6EX0 1 REMARK REVDAT 3 27-SEP-23 6EX0 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 FORMUL LINK ATOM REVDAT 2 28-MAR-18 6EX0 1 JRNL REVDAT 1 24-JAN-18 6EX0 0 JRNL AUTH M.C.MANAV,J.BELJANTSEVA,M.S.BOJER,T.TENSON,H.INGMER, JRNL AUTH 2 V.HAURYLIUK,D.E.BRODERSEN JRNL TITL STRUCTURAL BASIS FOR (P)PPGPP SYNTHESIS BY THESTAPHYLOCOCCUS JRNL TITL 2 AUREUSSMALL ALARMONE SYNTHETASE RELP. JRNL REF J. BIOL. CHEM. V. 293 3254 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29326162 JRNL DOI 10.1074/JBC.RA117.001374 REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2614: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 133228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.9200 - 2.7800 0.22 21285 0 0.0000 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EX0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1200007327. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.780 REMARK 200 RESOLUTION RANGE LOW (A) : 53.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07323 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 1.04800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5DED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES-NA PH7.0 0.2M SODIUM REMARK 280 THIOCYANATE 40% PENTAERYTHRIOL PROPOXYLATE (5/4 PO/OH), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 62.16500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.57500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.28750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.16500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 159.86250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 159.86250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.16500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 53.28750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 62.16500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 106.57500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 62.16500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 106.57500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 62.16500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 159.86250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 53.28750 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 62.16500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 53.28750 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 159.86250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 62.16500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 62.16500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 106.57500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 186.49500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 159.86250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 VAL A 3 REMARK 465 ASP A 4 REMARK 465 ARG A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 TYR A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 ASP A 13 REMARK 465 LEU A 14 REMARK 465 ARG A 15 REMARK 465 HIS A 16 REMARK 465 ASP A 17 REMARK 465 PHE A 18 REMARK 465 LYS A 19 REMARK 465 ASN A 20 REMARK 465 SER A 21 REMARK 465 LEU A 22 REMARK 465 SER A 23 REMARK 465 LYS A 24 REMARK 465 PHE A 25 REMARK 465 GLU A 26 REMARK 465 ASN A 27 REMARK 465 GLY A 28 REMARK 465 ASP A 29 REMARK 465 GLU A 30 REMARK 465 LYS A 195 REMARK 465 ASN A 196 REMARK 465 ASN A 197 REMARK 465 ALA A 198 REMARK 465 GLU A 199 REMARK 465 THR A 200 REMARK 465 GLY A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 MET B 1 REMARK 465 TYR B 2 REMARK 465 VAL B 3 REMARK 465 ASP B 4 REMARK 465 ARG B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 TYR B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 12 REMARK 465 ASP B 13 REMARK 465 LEU B 14 REMARK 465 ARG B 15 REMARK 465 HIS B 16 REMARK 465 ASP B 17 REMARK 465 PHE B 18 REMARK 465 LYS B 19 REMARK 465 ASN B 20 REMARK 465 SER B 21 REMARK 465 LEU B 22 REMARK 465 SER B 23 REMARK 465 LYS B 24 REMARK 465 PHE B 25 REMARK 465 GLU B 26 REMARK 465 ASN B 27 REMARK 465 GLY B 28 REMARK 465 ASP B 29 REMARK 465 GLU B 30 REMARK 465 ALA B 31 REMARK 465 LYS B 195 REMARK 465 ASN B 196 REMARK 465 GLY B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 465 HIS B 237 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 205 O HOH B 401 2.01 REMARK 500 OH TYR A 67 OE2 GLU B 166 2.01 REMARK 500 O3G 0O2 A 301 O HOH A 401 2.03 REMARK 500 NH1 ARG A 78 O ASP A 107 2.07 REMARK 500 OE1 GLU B 51 O HOH B 402 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 32 178.15 168.94 REMARK 500 HIS A 69 132.51 -172.99 REMARK 500 SER A 153 144.94 173.51 REMARK 500 THR A 229 -130.80 63.01 REMARK 500 THR B 34 103.96 -47.30 REMARK 500 HIS B 69 130.37 -175.03 REMARK 500 SER B 153 147.57 173.25 REMARK 500 ALA B 198 105.22 -46.22 REMARK 500 THR B 200 -102.06 46.17 REMARK 500 GLU B 201 -85.73 43.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 302 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 407 O REMARK 620 2 GLU B 51 OE1 61.4 REMARK 620 3 HOH B 402 O 74.8 48.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0O2 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0O2 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 B 302 DBREF 6EX0 A 1 230 UNP W8U368 W8U368_STAAU 1 230 DBREF 6EX0 B 1 230 UNP W8U368 W8U368_STAAU 1 230 SEQADV 6EX0 GLY A 231 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 232 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 233 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 234 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 235 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 236 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS A 237 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 GLY B 231 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 232 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 233 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 234 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 235 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 236 UNP W8U368 EXPRESSION TAG SEQADV 6EX0 HIS B 237 UNP W8U368 EXPRESSION TAG SEQRES 1 A 237 MET TYR VAL ASP ARG LYS PRO SER LEU TYR LEU GLU ASP SEQRES 2 A 237 LEU ARG HIS ASP PHE LYS ASN SER LEU SER LYS PHE GLU SEQRES 3 A 237 ASN GLY ASP GLU ALA PHE ASP THR LEU LEU GLY PHE VAL SEQRES 4 A 237 GLU LEU ASP HIS ILE TYR SER SER ALA LEU LYS GLU ILE SEQRES 5 A 237 SER THR LYS LEU SER ILE LEU ASP ASP ASN PHE ASN HIS SEQRES 6 A 237 ILE TYR LYS HIS ASN PRO ILE HIS HIS MET GLU ARG ARG SEQRES 7 A 237 VAL LYS GLU MET ARG SER LEU ILE GLU LYS LEU ASN ARG SEQRES 8 A 237 LYS GLY LEU GLN ILE SER ALA GLU THR ALA LYS GLU HIS SEQRES 9 A 237 ILE LEU ASP ILE ALA GLY ILE ARG VAL VAL CYS ASN TYR SEQRES 10 A 237 LEU ASP ASP ILE TYR LEU ILE GLU GLU MET LEU LEU LYS SEQRES 11 A 237 GLN GLU ASP VAL GLN LEU ILE LYS ARG LYS ASP TYR ILE SEQRES 12 A 237 GLN HIS PRO LYS GLU ASN GLY TYR ARG SER LEU HIS ILE SEQRES 13 A 237 VAL VAL SER ILE PRO VAL PHE LEU ALA GLU ARG VAL GLU SEQRES 14 A 237 VAL LEU PRO VAL GLU ILE GLN ILE ARG THR ILE GLY MET SEQRES 15 A 237 ASP MET TRP ALA SER LEU GLU HIS LYS ILE ARG TYR LYS SEQRES 16 A 237 ASN ASN ALA GLU THR GLU LYS TYR ARG ASP LEU LEU LYS SEQRES 17 A 237 GLU CYS ALA THR GLU ILE THR GLU VAL GLU ASP LYS LEU SEQRES 18 A 237 GLN GLN ILE HIS SER GLU ILE THR GLU GLY HIS HIS HIS SEQRES 19 A 237 HIS HIS HIS SEQRES 1 B 237 MET TYR VAL ASP ARG LYS PRO SER LEU TYR LEU GLU ASP SEQRES 2 B 237 LEU ARG HIS ASP PHE LYS ASN SER LEU SER LYS PHE GLU SEQRES 3 B 237 ASN GLY ASP GLU ALA PHE ASP THR LEU LEU GLY PHE VAL SEQRES 4 B 237 GLU LEU ASP HIS ILE TYR SER SER ALA LEU LYS GLU ILE SEQRES 5 B 237 SER THR LYS LEU SER ILE LEU ASP ASP ASN PHE ASN HIS SEQRES 6 B 237 ILE TYR LYS HIS ASN PRO ILE HIS HIS MET GLU ARG ARG SEQRES 7 B 237 VAL LYS GLU MET ARG SER LEU ILE GLU LYS LEU ASN ARG SEQRES 8 B 237 LYS GLY LEU GLN ILE SER ALA GLU THR ALA LYS GLU HIS SEQRES 9 B 237 ILE LEU ASP ILE ALA GLY ILE ARG VAL VAL CYS ASN TYR SEQRES 10 B 237 LEU ASP ASP ILE TYR LEU ILE GLU GLU MET LEU LEU LYS SEQRES 11 B 237 GLN GLU ASP VAL GLN LEU ILE LYS ARG LYS ASP TYR ILE SEQRES 12 B 237 GLN HIS PRO LYS GLU ASN GLY TYR ARG SER LEU HIS ILE SEQRES 13 B 237 VAL VAL SER ILE PRO VAL PHE LEU ALA GLU ARG VAL GLU SEQRES 14 B 237 VAL LEU PRO VAL GLU ILE GLN ILE ARG THR ILE GLY MET SEQRES 15 B 237 ASP MET TRP ALA SER LEU GLU HIS LYS ILE ARG TYR LYS SEQRES 16 B 237 ASN ASN ALA GLU THR GLU LYS TYR ARG ASP LEU LEU LYS SEQRES 17 B 237 GLU CYS ALA THR GLU ILE THR GLU VAL GLU ASP LYS LEU SEQRES 18 B 237 GLN GLN ILE HIS SER GLU ILE THR GLU GLY HIS HIS HIS SEQRES 19 B 237 HIS HIS HIS HET 0O2 A 301 51 HET 0O2 B 301 40 HET FE2 B 302 1 HETNAM 0O2 GUANOSINE 5'-(TETRAHYDROGEN TRIPHOSPHATE) 3'- HETNAM 2 0O2 (TRIHYDROGEN DIPHOSPHATE) HETNAM FE2 FE (II) ION FORMUL 3 0O2 2(C10 H18 N5 O20 P5) FORMUL 5 FE2 FE 2+ FORMUL 6 HOH *25(H2 O) HELIX 1 AA1 THR A 34 LYS A 68 1 35 HELIX 2 AA2 GLU A 81 LYS A 92 1 12 HELIX 3 AA3 SER A 97 ILE A 105 1 9 HELIX 4 AA4 TYR A 117 LYS A 130 1 14 HELIX 5 AA5 ILE A 180 TYR A 194 1 15 HELIX 6 AA6 LYS A 202 THR A 229 1 28 HELIX 7 AA7 GLY B 37 LYS B 68 1 32 HELIX 8 AA8 GLU B 81 LYS B 92 1 12 HELIX 9 AA9 SER B 97 ILE B 105 1 9 HELIX 10 AB1 TYR B 117 LYS B 130 1 14 HELIX 11 AB2 ILE B 180 TYR B 194 1 15 HELIX 12 AB3 GLU B 201 THR B 229 1 29 SHEET 1 AA1 5 ILE A 72 VAL A 79 0 SHEET 2 AA1 5 ALA A 109 CYS A 115 -1 O ARG A 112 N GLU A 76 SHEET 3 AA1 5 VAL A 168 THR A 179 1 O ARG A 178 N CYS A 115 SHEET 4 AA1 5 LEU A 154 PHE A 163 -1 N VAL A 162 O GLU A 169 SHEET 5 AA1 5 GLN A 135 ASP A 141 -1 N ILE A 137 O VAL A 157 SHEET 1 AA2 5 ILE B 72 VAL B 79 0 SHEET 2 AA2 5 ALA B 109 CYS B 115 -1 O VAL B 114 N HIS B 74 SHEET 3 AA2 5 VAL B 168 THR B 179 1 O ARG B 178 N CYS B 115 SHEET 4 AA2 5 LEU B 154 PHE B 163 -1 N ILE B 156 O ILE B 175 SHEET 5 AA2 5 GLN B 135 ASP B 141 -1 N LYS B 140 O HIS B 155 LINK O HOH A 407 FE FE2 B 302 1555 1555 2.74 LINK OE1 GLU B 51 FE FE2 B 302 1555 1555 2.62 LINK FE FE2 B 302 O HOH B 402 1555 1555 2.42 SITE 1 AC1 13 LYS A 92 ASP A 107 ARG A 112 LYS A 147 SITE 2 AC1 13 ASN A 149 TYR A 151 HIS A 155 GLN A 176 SITE 3 AC1 13 ALA A 186 GLU A 189 HIS A 190 ARG A 193 SITE 4 AC1 13 HOH A 401 SITE 1 AC2 15 ARG B 78 LYS B 80 LYS B 88 ARG B 91 SITE 2 AC2 15 ASP B 107 ARG B 112 LYS B 147 ASN B 149 SITE 3 AC2 15 TYR B 151 HIS B 155 GLN B 176 ALA B 186 SITE 4 AC2 15 GLU B 189 HIS B 190 ARG B 193 SITE 1 AC3 6 GLU A 51 HOH A 403 HOH A 407 HOH A 409 SITE 2 AC3 6 GLU B 51 HOH B 402 CRYST1 124.330 124.330 213.150 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008043 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008043 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004692 0.00000