HEADER TRANSFERASE 21-NOV-17 6F14 TITLE CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A TITLE 2 COCRYSTALLIZED WITH ISOQUINOLINE AND PKI (5-24) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PKI-ALPHA,CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 11 MUSCLE/BRAIN ISOFORM; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: PRKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PHOSPHOTRANSFERASE, SIGNALLING PATHWAYS, GLYCOGEN METABOLISM, KEYWDS 2 SERINE/THREONINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OEBBEKE,B.WIENEN-SCHMIDT,A.HEINE,G.KLEBE REVDAT 1 12-DEC-18 6F14 0 JRNL AUTH M.OEBBEKE,B.WIENEN-SCHMIDT,H.-D.GERBER,A.HEINE,G.KLEBE JRNL TITL FRAGMENT BASED DRUG DESIGN - SMALL CHEMICAL CHANGES OF JRNL TITL 2 FRAGMENTS EFFECTING BIG CHANGES IN BINDING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1-2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1874 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9443 - 4.3884 0.99 2908 153 0.1667 0.1840 REMARK 3 2 4.3884 - 3.4837 1.00 2787 147 0.1556 0.1873 REMARK 3 3 3.4837 - 3.0434 1.00 2770 146 0.1800 0.1877 REMARK 3 4 3.0434 - 2.7652 1.00 2763 145 0.1827 0.2291 REMARK 3 5 2.7652 - 2.5670 1.00 2733 144 0.1871 0.2465 REMARK 3 6 2.5670 - 2.4157 1.00 2719 143 0.1757 0.2075 REMARK 3 7 2.4157 - 2.2947 1.00 2742 145 0.1684 0.2092 REMARK 3 8 2.2947 - 2.1949 1.00 2710 142 0.1711 0.2099 REMARK 3 9 2.1949 - 2.1104 1.00 2720 143 0.1718 0.2212 REMARK 3 10 2.1104 - 2.0375 1.00 2688 142 0.1776 0.2587 REMARK 3 11 2.0375 - 1.9738 1.00 2684 141 0.2061 0.2605 REMARK 3 12 1.9738 - 1.9174 1.00 2727 143 0.2088 0.2454 REMARK 3 13 1.9174 - 1.8669 0.99 2673 140 0.2119 0.2768 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3042 REMARK 3 ANGLE : 0.778 4132 REMARK 3 CHIRALITY : 0.053 441 REMARK 3 PLANARITY : 0.006 543 REMARK 3 DIHEDRAL : 17.332 1798 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9009 -3.9372 -17.3795 REMARK 3 T TENSOR REMARK 3 T11: 0.3536 T22: 0.3611 REMARK 3 T33: 0.3077 T12: -0.1127 REMARK 3 T13: -0.0969 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 0.0569 L22: 0.0162 REMARK 3 L33: 0.0229 L12: -0.0251 REMARK 3 L13: -0.0457 L23: 0.0187 REMARK 3 S TENSOR REMARK 3 S11: 0.1578 S12: -0.0325 S13: -0.1474 REMARK 3 S21: -0.0944 S22: -0.1907 S23: 0.0937 REMARK 3 S31: 0.4176 S32: -0.4004 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1382 20.8760 0.2290 REMARK 3 T TENSOR REMARK 3 T11: 0.1303 T22: 0.2627 REMARK 3 T33: 0.2408 T12: 0.0920 REMARK 3 T13: -0.0023 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.0567 L22: 0.2069 REMARK 3 L33: 0.1512 L12: 0.0961 REMARK 3 L13: -0.0843 L23: -0.1753 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.0036 S13: 0.0823 REMARK 3 S21: 0.0903 S22: 0.0485 S23: 0.0108 REMARK 3 S31: -0.3033 S32: -0.0993 S33: 0.0141 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7655 6.4705 -2.1569 REMARK 3 T TENSOR REMARK 3 T11: 0.1010 T22: 0.1627 REMARK 3 T33: 0.1583 T12: -0.0030 REMARK 3 T13: 0.0057 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.1868 L22: 0.1776 REMARK 3 L33: 0.8161 L12: -0.1754 REMARK 3 L13: 0.1094 L23: -0.1289 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.0198 S13: 0.0398 REMARK 3 S21: -0.0251 S22: 0.0601 S23: 0.0666 REMARK 3 S31: 0.1010 S32: -0.1099 S33: 0.0096 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5771 -3.1410 -4.0891 REMARK 3 T TENSOR REMARK 3 T11: 0.1980 T22: 0.1656 REMARK 3 T33: 0.1375 T12: 0.0603 REMARK 3 T13: 0.0284 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.1534 L22: 0.3558 REMARK 3 L33: 0.4229 L12: 0.0568 REMARK 3 L13: 0.1340 L23: -0.2921 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: 0.0026 S13: -0.0609 REMARK 3 S21: -0.1100 S22: -0.0506 S23: -0.0325 REMARK 3 S31: 0.3684 S32: 0.0897 S33: -0.0078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.2320 -15.5362 -0.8037 REMARK 3 T TENSOR REMARK 3 T11: 0.5721 T22: 0.0934 REMARK 3 T33: 0.2353 T12: -0.0742 REMARK 3 T13: 0.0432 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.3151 L22: 0.1483 REMARK 3 L33: 1.0399 L12: -0.1468 REMARK 3 L13: 0.2431 L23: -0.1134 REMARK 3 S TENSOR REMARK 3 S11: 0.1367 S12: -0.0663 S13: -0.4581 REMARK 3 S21: -0.0999 S22: 0.0670 S23: 0.2370 REMARK 3 S31: 1.0078 S32: -0.1894 S33: 0.6348 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4026 19.7916 1.5063 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.2215 REMARK 3 T33: 0.2082 T12: 0.0141 REMARK 3 T13: -0.0192 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.1747 L22: 0.2157 REMARK 3 L33: 0.1571 L12: -0.2188 REMARK 3 L13: -0.0707 L23: 0.0474 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: -0.0824 S13: 0.1078 REMARK 3 S21: 0.0979 S22: 0.0907 S23: -0.0857 REMARK 3 S31: -0.2627 S32: 0.0568 S33: 0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9536 -8.1732 16.2105 REMARK 3 T TENSOR REMARK 3 T11: 0.1993 T22: 0.2536 REMARK 3 T33: 0.1758 T12: 0.0585 REMARK 3 T13: 0.0095 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0011 L22: 0.0100 REMARK 3 L33: 0.0024 L12: -0.0010 REMARK 3 L13: 0.0029 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: -0.0536 S12: -0.0081 S13: 0.0608 REMARK 3 S21: 0.0319 S22: -0.1046 S23: 0.0060 REMARK 3 S31: -0.0506 S32: -0.0444 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6356 2.6877 7.5244 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.2241 REMARK 3 T33: 0.1768 T12: 0.0585 REMARK 3 T13: -0.0283 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.0091 L22: 0.0148 REMARK 3 L33: 0.0090 L12: -0.0105 REMARK 3 L13: -0.0066 L23: 0.0126 REMARK 3 S TENSOR REMARK 3 S11: -0.0659 S12: -0.1534 S13: -0.0186 REMARK 3 S21: 0.0907 S22: -0.0805 S23: -0.0555 REMARK 3 S31: 0.0076 S32: 0.0431 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F14 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1200007272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER (1.10.1_2155: ???) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 MM MES-BIS-TRIS-BUFFER, 1MM REMARK 280 DITHIOTHREITOL, 0.1 MM SODIUM EDTA, 75 MM LICL, 0.03 MM MEGA 8, REMARK 280 10 MM ISOQUINOLINE IN DMSO, 0.07 MM PKI (5-24) AND METHANOL 24 % REMARK 280 (V/V), PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.37350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.46550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.63650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.46550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.37350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.63650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 GLY A 52 REMARK 465 SER A 53 REMARK 465 PHE A 54 REMARK 465 GLY A 55 REMARK 465 HIS B 23 REMARK 465 ASP B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 SER A 10 OG REMARK 470 GLU A 11 CD OE1 OE2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 28 CD CE NZ REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 LYS A 81 CE NZ REMARK 470 LYS A 83 CE NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 ARG A 134 CZ NH1 NH2 REMARK 470 GLN A 176 OE1 NE2 REMARK 470 GLN A 177 CD OE1 NE2 REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLN A 242 CG CD OE1 NE2 REMARK 470 ILE A 244 CG1 CD1 REMARK 470 LYS A 279 CE NZ REMARK 470 LYS A 285 CD CE NZ REMARK 470 LYS A 295 CD CE NZ REMARK 470 LYS A 309 CE NZ REMARK 470 LYS A 317 CD CE NZ REMARK 470 LYS A 319 CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 339 CD1 REMARK 470 LYS A 345 CD CE NZ REMARK 470 ILE B 22 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 166 43.83 -149.59 REMARK 500 ASP A 184 92.59 68.01 REMARK 500 ASN A 216 -157.66 -139.22 REMARK 500 ASN A 216 -157.66 -137.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISQ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRD A 402 DBREF 6F14 A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6F14 B 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQRES 1 A 351 MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SER GLU GLN SEQRES 2 A 351 GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU GLU SEQRES 3 A 351 PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN THR ALA SEQRES 4 A 351 GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU GLY THR SEQRES 5 A 351 GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SEQRES 6 A 351 THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN SEQRES 7 A 351 LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN SEQRES 8 A 351 GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU SEQRES 9 A 351 VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU SEQRES 10 A 351 TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU MET PHE SEQRES 11 A 351 SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO HIS SEQRES 12 A 351 ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU SEQRES 13 A 351 TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS SEQRES 14 A 351 PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN SEQRES 15 A 351 VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG SEQRES 16 A 351 THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO SEQRES 17 A 351 GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP SEQRES 18 A 351 TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA SEQRES 19 A 351 GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE SEQRES 20 A 351 TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER SEQRES 21 A 351 HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU SEQRES 22 A 351 LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS SEQRES 23 A 351 ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA SEQRES 24 A 351 THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU SEQRES 25 A 351 ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SEQRES 26 A 351 SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEQRES 27 A 351 SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 6F14 TPO A 197 THR MODIFIED RESIDUE MODRES 6F14 SEP A 338 SER MODIFIED RESIDUE HET TPO A 197 11 HET SEP A 338 10 HET ISQ A 401 10 HET MRD A 402 8 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM ISQ ISOQUINOLINE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 ISQ C9 H7 N FORMUL 4 MRD C6 H14 O2 FORMUL 5 HOH *281(H2 O) HELIX 1 AA1 GLY A 9 SER A 32 1 24 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 GLN A 96 1 13 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 GLY A 253 1 12 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 THR B 6 ALA B 12 1 7 SHEET 1 AA1 5 PHE A 43 GLY A 50 0 SHEET 2 AA1 5 VAL A 57 HIS A 62 -1 O LEU A 59 N LYS A 47 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O MET A 71 N MET A 58 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 120 N ALA A 70 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N GLU A 107 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C TRP A 196 N TPO A 197 1555 1555 1.34 LINK C TPO A 197 N LEU A 198 1555 1555 1.32 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 SITE 1 AC1 5 ALA A 70 GLU A 121 VAL A 123 LEU A 173 SITE 2 AC1 5 PHE A 327 SITE 1 AC2 5 ARG A 134 ASN A 326 PHE A 327 ASP A 328 SITE 2 AC2 5 HOH A 532 CRYST1 72.747 75.273 80.931 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013746 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012356 0.00000