HEADER LIPID BINDING PROTEIN 23-NOV-17 6F24 TITLE PH DOMAIN FROM PFAPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-TERMINAL PH DOMAIN FROM PFAPH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM TANZANIA (2000708); SOURCE 3 ORGANISM_TAXID: 1036725; SOURCE 4 GENE: PFTANZ_00863; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PH DOMAIN, PHOSPHATIDIC ACID BINDING, MEMBRANE ASSOCIATION, LIPID KEYWDS 2 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR N.DARVILL,B.LIU,S.MATTHEWS,D.SOLDATI-FAVRE,S.ROUSE,S.BENJAMIN, AUTHOR 2 T.BLAKE,D.J.DUBOIS,P.M.HAMMOUDI,P.PINO REVDAT 2 14-JUN-23 6F24 1 REMARK REVDAT 1 12-DEC-18 6F24 0 JRNL AUTH N.DARVILL,S.MATTHEWS,B.LIU,D.SOLDATI-FAVRE,S.ROUSE, JRNL AUTH 2 S.BENJAMIN,T.BLAKE,D.J.DUBOIS,P.M.HAMMOUDI,P.PINO JRNL TITL C-TERMINAL PH DOMAIN FROM P. FALCIPARUM ACYLATED PLEKSTRIN JRNL TITL 2 HOMOLOGY DOMAIN CONTAINING PROTEIN (APH) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRVIEW REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1200007358. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 300 NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 830 UM [U-100% 15N]; [U-100% REMARK 210 13C] C-TERMINAL PH DOMAIN FROM REMARK 210 PFAPH, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HNCO; 3D HN(CO)CA; REMARK 210 3D HBHA(CO)NH; 3D C(CO)NH; 3D REMARK 210 H(CCO)NH; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA, NMRVIEW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 5 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 41 HZ3 LYS A 60 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 13 -90.24 -131.36 REMARK 500 1 LYS A 14 27.34 -144.45 REMARK 500 1 ASP A 15 -41.12 -164.06 REMARK 500 1 ILE A 16 -84.58 -86.32 REMARK 500 1 LYS A 58 125.22 -35.24 REMARK 500 1 LYS A 60 -74.02 -84.68 REMARK 500 1 ASN A 61 -84.29 -177.01 REMARK 500 1 SER A 63 46.38 -90.49 REMARK 500 1 LYS A 66 -30.92 -150.96 REMARK 500 1 HIS A 99 95.83 -37.99 REMARK 500 1 ILE A 100 151.76 171.51 REMARK 500 2 ALA A 13 -89.93 62.01 REMARK 500 2 ASP A 15 42.16 72.43 REMARK 500 2 ILE A 16 -80.19 -92.91 REMARK 500 2 LYS A 58 114.25 -30.17 REMARK 500 2 LYS A 60 -72.39 -79.61 REMARK 500 2 ASN A 61 -151.84 -170.43 REMARK 500 2 LYS A 67 -6.72 70.26 REMARK 500 2 ASN A 87 79.23 -161.66 REMARK 500 2 HIS A 99 93.52 -37.97 REMARK 500 2 ILE A 100 147.15 171.12 REMARK 500 3 ALA A 13 -81.20 -159.78 REMARK 500 3 ILE A 16 -85.24 -94.20 REMARK 500 3 LYS A 58 118.80 -36.70 REMARK 500 3 LYS A 60 -78.24 -72.70 REMARK 500 3 ASN A 61 -151.46 -178.23 REMARK 500 3 SER A 63 24.17 -155.01 REMARK 500 3 LYS A 67 17.70 56.84 REMARK 500 3 SER A 80 119.89 -160.39 REMARK 500 3 ASN A 87 91.76 -170.41 REMARK 500 3 HIS A 99 96.73 -37.73 REMARK 500 3 ILE A 100 154.29 170.64 REMARK 500 3 MET A 129 31.68 -98.78 REMARK 500 4 ALA A 13 -85.04 -79.86 REMARK 500 4 ILE A 16 -86.94 -95.79 REMARK 500 4 LYS A 58 118.43 -34.88 REMARK 500 4 ASP A 62 -80.06 -120.52 REMARK 500 4 HIS A 99 97.73 -39.66 REMARK 500 4 ILE A 100 164.51 168.40 REMARK 500 4 MET A 129 30.35 -97.53 REMARK 500 5 ALA A 13 -71.45 -146.04 REMARK 500 5 LYS A 14 27.08 -169.34 REMARK 500 5 ASP A 15 -32.88 -168.96 REMARK 500 5 ILE A 16 -82.36 -83.42 REMARK 500 5 LYS A 17 -71.18 -75.06 REMARK 500 5 THR A 36 -169.69 -127.72 REMARK 500 5 LYS A 58 110.89 -32.66 REMARK 500 5 ASN A 61 32.57 -89.45 REMARK 500 5 ASP A 62 -155.60 -129.18 REMARK 500 5 LYS A 67 14.71 59.55 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34202 RELATED DB: BMRB REMARK 900 PH DOMAIN FROM PFAPH DBREF1 6F24 A 12 130 UNP A0A024WCG0_PLAFA DBREF2 6F24 A A0A024WCG0 117 235 SEQRES 1 A 119 SER ALA LYS ASP ILE LYS ASP GLU LYS ILE GLN GLN TYR SEQRES 2 A 119 ARG LYS THR LEU THR LYS ILE VAL LYS ILE LYS THR ALA SEQRES 3 A 119 ILE PHE HIS GLU THR VAL LYS VAL THR CYS SER LYS ASP SEQRES 4 A 119 GLY LYS MET LEU GLU TRP TYR LYS GLY LYS ASN ASP SER SEQRES 5 A 119 ASP GLY LYS LYS LYS PRO ILE GLY SER PHE PRO LEU ASN SEQRES 6 A 119 LYS ILE THR SER ILE ARG THR LYS VAL ASP ASN LEU LYS SEQRES 7 A 119 SER LEU GLU ILE SER VAL SER SER VAL HIS ILE SER THR SEQRES 8 A 119 TYR LEU PHE THR PHE LYS THR ARG GLU GLU ARG GLU SER SEQRES 9 A 119 TRP GLN ASN ASN LEU GLU SER PHE ARG LYS ILE MET SER SEQRES 10 A 119 MET LYS HELIX 1 AA1 ILE A 16 THR A 29 1 14 HELIX 2 AA2 THR A 109 SER A 128 1 20 SHEET 1 AA1 7 PHE A 73 PRO A 74 0 SHEET 2 AA1 7 MET A 53 LYS A 58 -1 N LEU A 54 O PHE A 73 SHEET 3 AA1 7 HIS A 40 CYS A 47 -1 N LYS A 44 O TYR A 57 SHEET 4 AA1 7 LYS A 30 LYS A 35 -1 N VAL A 32 O VAL A 43 SHEET 5 AA1 7 TYR A 103 THR A 106 -1 O THR A 106 N LYS A 33 SHEET 6 AA1 7 SER A 90 VAL A 95 -1 N ILE A 93 O TYR A 103 SHEET 7 AA1 7 ILE A 78 THR A 83 -1 N SER A 80 O SER A 94 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1