HEADER STRUCTURAL PROTEIN 04-DEC-17 6F63 TITLE CRYSTAL STRUCTURE OF THE SYCP1 C-TERMINAL BACK-TO-BACK ASSEMBLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTONEMAL COMPLEX PROTEIN 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: SCP-1,CANCER/TESTIS ANTIGEN 8,CT8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SYCP1, SCP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEIOSIS, CHROMOSOME STRUCTURE, COILED-COIL, SELF-ASSEMBLY, STRUCTURAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.DUNCE,C.MILLAN,I.USON,O.R.DAVIES REVDAT 4 22-APR-20 6F63 1 REMARK REVDAT 3 01-AUG-18 6F63 1 JRNL REVDAT 2 04-JUL-18 6F63 1 JRNL REVDAT 1 06-JUN-18 6F63 0 JRNL AUTH J.M.DUNCE,O.M.DUNNE,M.RATCLIFF,C.MILLAN,S.MADGWICK,I.USON, JRNL AUTH 2 O.R.DAVIES JRNL TITL STRUCTURAL BASIS OF MEIOTIC CHROMOSOME SYNAPSIS THROUGH JRNL TITL 2 SYCP1 SELF-ASSEMBLY. JRNL REF NAT. STRUCT. MOL. BIOL. V. 25 557 2018 JRNL REFN ESSN 1545-9985 JRNL PMID 29915389 JRNL DOI 10.1038/S41594-018-0078-9 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12RC1_2807: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 21416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.2605 - 4.1205 0.96 3214 169 0.1842 0.2005 REMARK 3 2 4.1205 - 3.2706 0.98 3171 165 0.1859 0.2423 REMARK 3 3 3.2706 - 2.8572 1.00 3191 167 0.2249 0.2351 REMARK 3 4 2.8572 - 2.5960 1.00 3205 154 0.2447 0.2891 REMARK 3 5 2.5960 - 2.4099 1.00 3204 149 0.2532 0.3075 REMARK 3 6 2.4099 - 2.2678 0.94 2980 170 0.2848 0.3350 REMARK 3 7 2.2678 - 2.1542 0.44 1410 67 0.3169 0.3325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3165 REMARK 3 ANGLE : 0.511 4211 REMARK 3 CHIRALITY : 0.035 478 REMARK 3 PLANARITY : 0.004 538 REMARK 3 DIHEDRAL : 16.629 1308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 28 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 673:679) REMARK 3 ORIGIN FOR THE GROUP (A): 230.4916 9.1800 -11.6504 REMARK 3 T TENSOR REMARK 3 T11: 0.5764 T22: 1.5421 REMARK 3 T33: 0.6843 T12: 0.1753 REMARK 3 T13: 0.2413 T23: 0.0965 REMARK 3 L TENSOR REMARK 3 L11: 4.4760 L22: 6.8382 REMARK 3 L33: 5.1212 L12: 5.0296 REMARK 3 L13: -3.3373 L23: -1.9826 REMARK 3 S TENSOR REMARK 3 S11: -1.2165 S12: -0.2566 S13: -1.5064 REMARK 3 S21: -0.4229 S22: 0.4908 S23: -1.0420 REMARK 3 S31: 0.8709 S32: 0.4571 S33: 0.7037 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 680:699) REMARK 3 ORIGIN FOR THE GROUP (A): 215.7040 9.9707 3.3890 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.7975 REMARK 3 T33: 0.2381 T12: 0.0720 REMARK 3 T13: 0.0973 T23: -0.0725 REMARK 3 L TENSOR REMARK 3 L11: 4.7090 L22: 2.4072 REMARK 3 L33: 3.9054 L12: -0.5144 REMARK 3 L13: -3.6581 L23: 0.3319 REMARK 3 S TENSOR REMARK 3 S11: -0.0859 S12: 0.1371 S13: -0.3520 REMARK 3 S21: -0.2933 S22: -0.0561 S23: -0.3565 REMARK 3 S31: 0.2174 S32: 0.0958 S33: 0.3284 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 700:726) REMARK 3 ORIGIN FOR THE GROUP (A): 192.9195 17.1863 27.3924 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.3378 REMARK 3 T33: 0.1162 T12: 0.0340 REMARK 3 T13: -0.0379 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 6.8592 L22: 3.8936 REMARK 3 L33: 4.1112 L12: -2.7118 REMARK 3 L13: -5.2002 L23: 2.7070 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.2937 S13: 0.0279 REMARK 3 S21: -0.1025 S22: 0.1091 S23: -0.0766 REMARK 3 S31: -0.0310 S32: 0.2542 S33: 0.0358 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 727:744) REMARK 3 ORIGIN FOR THE GROUP (A): 171.6953 24.8912 51.1325 REMARK 3 T TENSOR REMARK 3 T11: 0.4467 T22: 0.1229 REMARK 3 T33: 0.1792 T12: 0.0119 REMARK 3 T13: 0.0960 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 4.8864 L22: 0.4649 REMARK 3 L33: 2.2332 L12: -1.1506 REMARK 3 L13: -2.2823 L23: 1.0131 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: 0.4493 S13: -0.1794 REMARK 3 S21: -0.3902 S22: -0.0310 S23: -0.2096 REMARK 3 S31: 0.1922 S32: -0.0123 S33: 0.1085 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 745:751) REMARK 3 ORIGIN FOR THE GROUP (A): 163.7571 25.6633 69.0331 REMARK 3 T TENSOR REMARK 3 T11: 0.2645 T22: 0.0490 REMARK 3 T33: 0.2059 T12: 0.0888 REMARK 3 T13: -0.0427 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 6.0234 L22: 8.3487 REMARK 3 L33: 4.6453 L12: -5.5784 REMARK 3 L13: -4.0392 L23: 1.5803 REMARK 3 S TENSOR REMARK 3 S11: -0.1538 S12: -0.4199 S13: 0.6028 REMARK 3 S21: 0.6757 S22: 0.2814 S23: -0.8934 REMARK 3 S31: -0.2483 S32: 0.1837 S33: -0.0771 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 752:761) REMARK 3 ORIGIN FOR THE GROUP (A): 157.1584 24.8881 79.6786 REMARK 3 T TENSOR REMARK 3 T11: 0.4732 T22: 0.3558 REMARK 3 T33: 0.2285 T12: 0.0959 REMARK 3 T13: 0.0151 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 8.7383 L22: 3.0605 REMARK 3 L33: 5.4406 L12: -1.7885 REMARK 3 L13: 0.8546 L23: 2.3090 REMARK 3 S TENSOR REMARK 3 S11: -0.2181 S12: 0.0512 S13: -0.1035 REMARK 3 S21: 0.4692 S22: -0.0073 S23: 0.7163 REMARK 3 S31: -1.0341 S32: -1.3796 S33: 0.2226 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 762:768) REMARK 3 ORIGIN FOR THE GROUP (A): 151.5560 24.4108 91.3422 REMARK 3 T TENSOR REMARK 3 T11: 1.2350 T22: 0.7199 REMARK 3 T33: 0.8497 T12: 0.4110 REMARK 3 T13: 0.4176 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 4.4967 L22: 8.3650 REMARK 3 L33: 5.8246 L12: 2.6344 REMARK 3 L13: -3.2658 L23: 0.1038 REMARK 3 S TENSOR REMARK 3 S11: -0.7280 S12: -1.4688 S13: 0.1051 REMARK 3 S21: 1.8296 S22: 0.0580 S23: 0.9349 REMARK 3 S31: 0.6092 S32: -0.4291 S33: 0.6455 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 673:682) REMARK 3 ORIGIN FOR THE GROUP (A): 161.5649 17.9600 87.2681 REMARK 3 T TENSOR REMARK 3 T11: 0.6105 T22: 0.8438 REMARK 3 T33: 0.4092 T12: 0.0718 REMARK 3 T13: 0.0916 T23: 0.1516 REMARK 3 L TENSOR REMARK 3 L11: 3.0946 L22: 3.9158 REMARK 3 L33: 6.1270 L12: 2.8352 REMARK 3 L13: 0.6515 L23: -2.2138 REMARK 3 S TENSOR REMARK 3 S11: 0.1988 S12: -1.8343 S13: -0.6196 REMARK 3 S21: 1.9314 S22: 0.1069 S23: 0.6550 REMARK 3 S31: 0.3382 S32: 0.0689 S33: -0.2530 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 683:689) REMARK 3 ORIGIN FOR THE GROUP (A): 169.0808 20.9646 78.0529 REMARK 3 T TENSOR REMARK 3 T11: 0.2802 T22: 0.0735 REMARK 3 T33: 0.2363 T12: -0.0506 REMARK 3 T13: 0.0142 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 2.4435 L22: 5.8530 REMARK 3 L33: 4.8359 L12: -1.7413 REMARK 3 L13: -1.0339 L23: 4.1933 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.1734 S13: 0.0876 REMARK 3 S21: 0.4368 S22: -0.0832 S23: 0.0791 REMARK 3 S31: -0.0289 S32: -0.0800 S33: 0.0775 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 690:702) REMARK 3 ORIGIN FOR THE GROUP (A): 178.9487 22.3619 65.7902 REMARK 3 T TENSOR REMARK 3 T11: 0.4221 T22: 0.1545 REMARK 3 T33: 0.1951 T12: -0.0636 REMARK 3 T13: -0.0294 T23: 0.1074 REMARK 3 L TENSOR REMARK 3 L11: 2.8742 L22: 3.5423 REMARK 3 L33: 2.6778 L12: -0.0021 REMARK 3 L13: -1.1369 L23: -2.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.1761 S12: 0.1237 S13: 0.2752 REMARK 3 S21: 0.1212 S22: 0.0413 S23: 0.0101 REMARK 3 S31: -0.3209 S32: -0.0838 S33: 0.0071 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 703:726) REMARK 3 ORIGIN FOR THE GROUP (A): 190.3446 25.0391 40.4253 REMARK 3 T TENSOR REMARK 3 T11: 0.2195 T22: 0.3960 REMARK 3 T33: 0.1260 T12: -0.0646 REMARK 3 T13: 0.0863 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 3.3303 L22: 1.9011 REMARK 3 L33: 2.4406 L12: 0.5884 REMARK 3 L13: -2.8009 L23: -0.8804 REMARK 3 S TENSOR REMARK 3 S11: 0.2057 S12: 0.1837 S13: 0.1829 REMARK 3 S21: -0.0110 S22: 0.1389 S23: -0.0379 REMARK 3 S31: -0.2877 S32: 0.1097 S33: -0.1049 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 727:735) REMARK 3 ORIGIN FOR THE GROUP (A): 199.3596 27.6055 17.9971 REMARK 3 T TENSOR REMARK 3 T11: 1.0490 T22: 1.4039 REMARK 3 T33: 0.6846 T12: -0.0307 REMARK 3 T13: 0.1198 T23: 0.3623 REMARK 3 L TENSOR REMARK 3 L11: 9.2890 L22: 8.9879 REMARK 3 L33: 8.8494 L12: 4.5297 REMARK 3 L13: -0.3109 L23: -2.8639 REMARK 3 S TENSOR REMARK 3 S11: 0.1129 S12: -0.7818 S13: -0.3668 REMARK 3 S21: 0.6186 S22: 0.1793 S23: 0.1197 REMARK 3 S31: 0.8766 S32: -0.0158 S33: -0.2608 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 736:758) REMARK 3 ORIGIN FOR THE GROUP (A): 211.2073 20.6464 -0.8299 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.9697 REMARK 3 T33: 0.2012 T12: -0.0229 REMARK 3 T13: 0.0764 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 3.6354 L22: 2.3768 REMARK 3 L33: 3.7430 L12: -0.7419 REMARK 3 L13: -3.0601 L23: 1.0583 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: 0.0357 S13: 0.1262 REMARK 3 S21: 0.2007 S22: 0.0432 S23: 0.2170 REMARK 3 S31: -0.1580 S32: -0.1128 S33: -0.1523 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 759:768) REMARK 3 ORIGIN FOR THE GROUP (A): 226.4571 13.1461 -19.5457 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 1.2455 REMARK 3 T33: 0.4297 T12: 0.0059 REMARK 3 T13: -0.0071 T23: 0.0666 REMARK 3 L TENSOR REMARK 3 L11: 5.1819 L22: 5.3419 REMARK 3 L33: 3.4110 L12: 2.5974 REMARK 3 L13: 2.8395 L23: -1.3146 REMARK 3 S TENSOR REMARK 3 S11: 0.1480 S12: 1.3849 S13: -0.3196 REMARK 3 S21: -0.3775 S22: -0.2637 S23: -0.5049 REMARK 3 S31: 0.0611 S32: 0.1279 S33: 0.1261 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN C AND RESID 674:690) REMARK 3 ORIGIN FOR THE GROUP (A): 223.7397 24.5345 -6.9966 REMARK 3 T TENSOR REMARK 3 T11: 0.3144 T22: 1.1442 REMARK 3 T33: 0.3471 T12: -0.0295 REMARK 3 T13: 0.0984 T23: 0.1168 REMARK 3 L TENSOR REMARK 3 L11: 3.9725 L22: 3.5668 REMARK 3 L33: 6.2046 L12: -0.7603 REMARK 3 L13: -4.1623 L23: 3.1784 REMARK 3 S TENSOR REMARK 3 S11: 0.5318 S12: 0.3471 S13: 0.6192 REMARK 3 S21: -0.5413 S22: 0.1528 S23: -0.3645 REMARK 3 S31: -0.7907 S32: -0.1458 S33: -0.7056 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN C AND RESID 691:697) REMARK 3 ORIGIN FOR THE GROUP (A): 215.1128 23.8224 9.4216 REMARK 3 T TENSOR REMARK 3 T11: 0.4222 T22: 0.8653 REMARK 3 T33: 0.2336 T12: -0.1696 REMARK 3 T13: 0.0967 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 5.3440 L22: 4.0092 REMARK 3 L33: 5.4791 L12: -2.3770 REMARK 3 L13: -5.2793 L23: 3.1890 REMARK 3 S TENSOR REMARK 3 S11: 0.2870 S12: -0.1717 S13: 0.1958 REMARK 3 S21: -0.1888 S22: -0.3182 S23: -0.3858 REMARK 3 S31: -0.5387 S32: 0.7039 S33: -0.0761 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN C AND RESID 698:705) REMARK 3 ORIGIN FOR THE GROUP (A): 209.4824 22.9137 18.9969 REMARK 3 T TENSOR REMARK 3 T11: 0.4657 T22: 0.9784 REMARK 3 T33: 0.2862 T12: -0.0047 REMARK 3 T13: -0.0231 T23: -0.1644 REMARK 3 L TENSOR REMARK 3 L11: 6.1381 L22: 8.8366 REMARK 3 L33: 2.3306 L12: 0.0510 REMARK 3 L13: -1.1978 L23: -4.2070 REMARK 3 S TENSOR REMARK 3 S11: -0.0781 S12: 0.0244 S13: 0.0817 REMARK 3 S21: -0.0648 S22: -0.1959 S23: 0.0994 REMARK 3 S31: -0.3871 S32: 0.0972 S33: 0.2723 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN C AND RESID 706:729) REMARK 3 ORIGIN FOR THE GROUP (A): 199.3728 17.7000 40.9237 REMARK 3 T TENSOR REMARK 3 T11: 0.1542 T22: 0.6365 REMARK 3 T33: 0.1851 T12: -0.0260 REMARK 3 T13: 0.0550 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 3.4558 L22: 0.7527 REMARK 3 L33: 5.1937 L12: 0.3624 REMARK 3 L13: -3.3004 L23: -0.2931 REMARK 3 S TENSOR REMARK 3 S11: 0.2099 S12: -0.3656 S13: -0.0502 REMARK 3 S21: 0.1080 S22: 0.0161 S23: 0.0456 REMARK 3 S31: -0.1057 S32: 0.3280 S33: 0.0414 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN C AND RESID 730:749) REMARK 3 ORIGIN FOR THE GROUP (A): 180.3621 12.8425 66.1119 REMARK 3 T TENSOR REMARK 3 T11: 0.1667 T22: 0.0197 REMARK 3 T33: 0.2898 T12: -0.0323 REMARK 3 T13: -0.0388 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.8793 L22: 0.3440 REMARK 3 L33: 0.9214 L12: -0.0977 REMARK 3 L13: -0.5988 L23: 0.2740 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: -0.0082 S13: -0.0275 REMARK 3 S21: 0.1207 S22: 0.0094 S23: 0.1226 REMARK 3 S31: -0.0609 S32: 0.0429 S33: 0.0587 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN C AND RESID 750:756) REMARK 3 ORIGIN FOR THE GROUP (A): 163.7663 11.9989 76.8641 REMARK 3 T TENSOR REMARK 3 T11: 0.3561 T22: 0.1322 REMARK 3 T33: 0.3819 T12: -0.0013 REMARK 3 T13: 0.1028 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 3.6244 L22: 3.3467 REMARK 3 L33: 5.7017 L12: -3.0036 REMARK 3 L13: -2.5482 L23: 0.4739 REMARK 3 S TENSOR REMARK 3 S11: -0.0769 S12: 0.0574 S13: 0.0546 REMARK 3 S21: -0.0743 S22: 0.3810 S23: -0.7734 REMARK 3 S31: 0.1017 S32: 0.2969 S33: -0.2285 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN C AND RESID 757:769) REMARK 3 ORIGIN FOR THE GROUP (A): 150.9607 11.2677 85.9441 REMARK 3 T TENSOR REMARK 3 T11: 0.3219 T22: 0.1834 REMARK 3 T33: 0.2672 T12: 0.1877 REMARK 3 T13: 0.1198 T23: 0.1063 REMARK 3 L TENSOR REMARK 3 L11: 3.9688 L22: 4.5609 REMARK 3 L33: 2.7049 L12: -2.0045 REMARK 3 L13: -1.4618 L23: 0.2551 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: -0.1251 S13: -0.0794 REMARK 3 S21: 0.2785 S22: 0.1109 S23: 0.1810 REMARK 3 S31: 0.0020 S32: -0.0612 S33: -0.0191 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN D AND RESID 673:680) REMARK 3 ORIGIN FOR THE GROUP (A): 148.5726 18.2322 78.8591 REMARK 3 T TENSOR REMARK 3 T11: 0.5690 T22: 0.8693 REMARK 3 T33: 0.5651 T12: 0.1837 REMARK 3 T13: 0.0609 T23: 0.1157 REMARK 3 L TENSOR REMARK 3 L11: 2.9426 L22: 5.6787 REMARK 3 L33: 3.6824 L12: -3.8827 REMARK 3 L13: -3.1185 L23: 3.9404 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: 0.0109 S13: 0.4373 REMARK 3 S21: 0.5394 S22: 0.5722 S23: 2.3257 REMARK 3 S31: -1.3283 S32: -3.3416 S33: -0.6043 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN D AND RESID 681:690) REMARK 3 ORIGIN FOR THE GROUP (A): 158.0944 16.8028 70.0487 REMARK 3 T TENSOR REMARK 3 T11: 0.3193 T22: 0.1016 REMARK 3 T33: 0.3352 T12: -0.1036 REMARK 3 T13: 0.0795 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 2.7477 L22: 3.3049 REMARK 3 L33: 2.7441 L12: 1.4464 REMARK 3 L13: -1.1911 L23: -2.9576 REMARK 3 S TENSOR REMARK 3 S11: 0.1264 S12: -0.1659 S13: -0.1207 REMARK 3 S21: 0.4860 S22: 0.0076 S23: 0.3950 REMARK 3 S31: -0.0437 S32: -0.1702 S33: -0.0388 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN D AND RESID 691:697) REMARK 3 ORIGIN FOR THE GROUP (A): 167.5986 15.8346 61.3338 REMARK 3 T TENSOR REMARK 3 T11: 0.1790 T22: 0.0606 REMARK 3 T33: 0.3017 T12: -0.0628 REMARK 3 T13: 0.0106 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 2.0996 L22: 6.3960 REMARK 3 L33: 4.4221 L12: 0.2532 REMARK 3 L13: -1.4798 L23: -0.3939 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: 0.0349 S13: -0.2326 REMARK 3 S21: -0.1124 S22: -0.0166 S23: 0.1736 REMARK 3 S31: 0.4122 S32: -0.2057 S33: -0.0541 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: (CHAIN D AND RESID 698:728) REMARK 3 ORIGIN FOR THE GROUP (A): 189.4471 12.7051 42.7578 REMARK 3 T TENSOR REMARK 3 T11: 0.1773 T22: 0.3253 REMARK 3 T33: 0.1782 T12: 0.0177 REMARK 3 T13: 0.0128 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 7.7783 L22: 2.8611 REMARK 3 L33: 6.6576 L12: -1.4083 REMARK 3 L13: -6.0239 L23: 1.5293 REMARK 3 S TENSOR REMARK 3 S11: -0.3661 S12: 0.4203 S13: -0.3241 REMARK 3 S21: -0.0620 S22: 0.0924 S23: -0.1963 REMARK 3 S31: 0.4750 S32: 0.1814 S33: 0.2321 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: (CHAIN D AND RESID 729:736) REMARK 3 ORIGIN FOR THE GROUP (A): 212.0563 8.9824 24.9905 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 1.2810 REMARK 3 T33: 0.5091 T12: 0.1424 REMARK 3 T13: -0.0354 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 4.3946 L22: 6.4204 REMARK 3 L33: 3.7391 L12: 2.9519 REMARK 3 L13: -3.6363 L23: -0.6423 REMARK 3 S TENSOR REMARK 3 S11: -0.2253 S12: -0.4042 S13: 0.7910 REMARK 3 S21: 0.0582 S22: 0.2794 S23: 1.2353 REMARK 3 S31: -0.0499 S32: -0.5938 S33: -0.1436 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: (CHAIN D AND RESID 737:741) REMARK 3 ORIGIN FOR THE GROUP (A): 217.4200 10.0174 16.4676 REMARK 3 T TENSOR REMARK 3 T11: 0.3095 T22: 1.1302 REMARK 3 T33: 0.4130 T12: 0.0571 REMARK 3 T13: 0.0772 T23: -0.1357 REMARK 3 L TENSOR REMARK 3 L11: 6.6620 L22: 2.8447 REMARK 3 L33: 8.0396 L12: 2.1752 REMARK 3 L13: -7.0432 L23: -3.0256 REMARK 3 S TENSOR REMARK 3 S11: -0.1501 S12: 0.9995 S13: -0.4511 REMARK 3 S21: -0.3955 S22: -0.0904 S23: -0.0463 REMARK 3 S31: 0.1799 S32: -0.7146 S33: 0.2453 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: (CHAIN D AND RESID 742:767) REMARK 3 ORIGIN FOR THE GROUP (A): 228.9861 16.8665 -2.1794 REMARK 3 T TENSOR REMARK 3 T11: 0.1831 T22: 1.2076 REMARK 3 T33: 0.3142 T12: 0.0620 REMARK 3 T13: -0.0120 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.1055 L22: 0.2929 REMARK 3 L33: 0.9245 L12: 0.1423 REMARK 3 L13: -0.2481 L23: -0.2385 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.1480 S13: 0.1003 REMARK 3 S21: -0.0450 S22: -0.0277 S23: -0.0141 REMARK 3 S31: 0.0002 S32: 0.0800 S33: -0.1208 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F63 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23092 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 116.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ARCIMBOLDO REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5 M SODIUM FORMATE PH 7.0; SOAKED IN REMARK 280 6 M SODIUM FORMATE PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 116.71000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 116.71000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -139.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 769 REMARK 465 GLU A 770 REMARK 465 ILE B 769 REMARK 465 GLU B 770 REMARK 465 GLY C 673 REMARK 465 GLU C 770 REMARK 465 GLU D 768 REMARK 465 ILE D 769 REMARK 465 GLU D 770 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 806 O HOH D 830 2.12 REMARK 500 NZ LYS D 697 O HOH D 801 2.12 REMARK 500 O HOH B 829 O HOH B 835 2.15 REMARK 500 OD2 ASP D 700 O HOH D 802 2.17 REMARK 500 NH2 ARG C 746 O HOH D 802 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 728 -10.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 6F63 A 676 770 UNP Q15431 SYCP1_HUMAN 676 770 DBREF 6F63 B 676 770 UNP Q15431 SYCP1_HUMAN 676 770 DBREF 6F63 C 676 770 UNP Q15431 SYCP1_HUMAN 676 770 DBREF 6F63 D 676 770 UNP Q15431 SYCP1_HUMAN 676 770 SEQADV 6F63 GLY A 673 UNP Q15431 EXPRESSION TAG SEQADV 6F63 SER A 674 UNP Q15431 EXPRESSION TAG SEQADV 6F63 MET A 675 UNP Q15431 EXPRESSION TAG SEQADV 6F63 GLY B 673 UNP Q15431 EXPRESSION TAG SEQADV 6F63 SER B 674 UNP Q15431 EXPRESSION TAG SEQADV 6F63 MET B 675 UNP Q15431 EXPRESSION TAG SEQADV 6F63 GLY C 673 UNP Q15431 EXPRESSION TAG SEQADV 6F63 SER C 674 UNP Q15431 EXPRESSION TAG SEQADV 6F63 MET C 675 UNP Q15431 EXPRESSION TAG SEQADV 6F63 GLY D 673 UNP Q15431 EXPRESSION TAG SEQADV 6F63 SER D 674 UNP Q15431 EXPRESSION TAG SEQADV 6F63 MET D 675 UNP Q15431 EXPRESSION TAG SEQRES 1 A 98 GLY SER MET GLU ASN LEU LEU GLU GLU VAL GLU LYS ALA SEQRES 2 A 98 LYS VAL ILE ALA ASP GLU ALA VAL LYS LEU GLN LYS GLU SEQRES 3 A 98 ILE ASP LYS ARG CYS GLN HIS LYS ILE ALA GLU MET VAL SEQRES 4 A 98 ALA LEU MET GLU LYS HIS LYS HIS GLN TYR ASP LYS ILE SEQRES 5 A 98 ILE GLU GLU ARG ASP SER GLU LEU GLY LEU TYR LYS SER SEQRES 6 A 98 LYS GLU GLN GLU GLN SER SER LEU ARG ALA SER LEU GLU SEQRES 7 A 98 ILE GLU LEU SER ASN LEU LYS ALA GLU LEU LEU SER VAL SEQRES 8 A 98 LYS LYS GLN LEU GLU ILE GLU SEQRES 1 B 98 GLY SER MET GLU ASN LEU LEU GLU GLU VAL GLU LYS ALA SEQRES 2 B 98 LYS VAL ILE ALA ASP GLU ALA VAL LYS LEU GLN LYS GLU SEQRES 3 B 98 ILE ASP LYS ARG CYS GLN HIS LYS ILE ALA GLU MET VAL SEQRES 4 B 98 ALA LEU MET GLU LYS HIS LYS HIS GLN TYR ASP LYS ILE SEQRES 5 B 98 ILE GLU GLU ARG ASP SER GLU LEU GLY LEU TYR LYS SER SEQRES 6 B 98 LYS GLU GLN GLU GLN SER SER LEU ARG ALA SER LEU GLU SEQRES 7 B 98 ILE GLU LEU SER ASN LEU LYS ALA GLU LEU LEU SER VAL SEQRES 8 B 98 LYS LYS GLN LEU GLU ILE GLU SEQRES 1 C 98 GLY SER MET GLU ASN LEU LEU GLU GLU VAL GLU LYS ALA SEQRES 2 C 98 LYS VAL ILE ALA ASP GLU ALA VAL LYS LEU GLN LYS GLU SEQRES 3 C 98 ILE ASP LYS ARG CYS GLN HIS LYS ILE ALA GLU MET VAL SEQRES 4 C 98 ALA LEU MET GLU LYS HIS LYS HIS GLN TYR ASP LYS ILE SEQRES 5 C 98 ILE GLU GLU ARG ASP SER GLU LEU GLY LEU TYR LYS SER SEQRES 6 C 98 LYS GLU GLN GLU GLN SER SER LEU ARG ALA SER LEU GLU SEQRES 7 C 98 ILE GLU LEU SER ASN LEU LYS ALA GLU LEU LEU SER VAL SEQRES 8 C 98 LYS LYS GLN LEU GLU ILE GLU SEQRES 1 D 98 GLY SER MET GLU ASN LEU LEU GLU GLU VAL GLU LYS ALA SEQRES 2 D 98 LYS VAL ILE ALA ASP GLU ALA VAL LYS LEU GLN LYS GLU SEQRES 3 D 98 ILE ASP LYS ARG CYS GLN HIS LYS ILE ALA GLU MET VAL SEQRES 4 D 98 ALA LEU MET GLU LYS HIS LYS HIS GLN TYR ASP LYS ILE SEQRES 5 D 98 ILE GLU GLU ARG ASP SER GLU LEU GLY LEU TYR LYS SER SEQRES 6 D 98 LYS GLU GLN GLU GLN SER SER LEU ARG ALA SER LEU GLU SEQRES 7 D 98 ILE GLU LEU SER ASN LEU LYS ALA GLU LEU LEU SER VAL SEQRES 8 D 98 LYS LYS GLN LEU GLU ILE GLU FORMUL 5 HOH *175(H2 O) HELIX 1 AA1 GLY A 673 GLU A 768 1 96 HELIX 2 AA2 MET B 675 GLU B 768 1 94 HELIX 3 AA3 MET C 675 GLU C 768 1 94 HELIX 4 AA4 SER D 674 LEU D 767 1 94 SSBOND 1 CYS B 703 CYS D 703 1555 1555 2.03 CRYST1 233.420 42.850 43.690 90.00 93.61 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004284 0.000000 0.000270 0.00000 SCALE2 0.000000 0.023337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022934 0.00000