HEADER SUGAR BINDING PROTEIN 08-DEC-17 6F7D TITLE CRYSTAL STRUCTURE OF DETTILON TAILSPIKE PROTEIN (GP208) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAILSPIKE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA PHAGE DET7; SOURCE 3 ORGANISM_TAXID: 454798; SOURCE 4 GENE: 208, DET7_208; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PET23A KEYWDS DET7, DETTILON, TAILSPIKE, MYOVIRUS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.ROSKE,U.HEINEMANN REVDAT 3 14-AUG-19 6F7D 1 JRNL REVDAT 2 26-JUN-19 6F7D 1 JRNL REVDAT 1 19-DEC-18 6F7D 0 JRNL AUTH N.K.BROEKER,Y.ROSKE,A.VALLERIANI,M.S.STEPHAN,D.ANDRES, JRNL AUTH 2 J.KOETZ,U.HEINEMANN,S.BARBIRZ JRNL TITL TIME-RESOLVED DNA RELEASE FROM AN JRNL TITL 2 O-ANTIGEN-SPECIFICSALMONELLABACTERIOPHAGE WITH A CONTRACTILE JRNL TITL 3 TAIL. JRNL REF J.BIOL.CHEM. V. 294 11751 2019 JRNL REFN ESSN 1083-351X JRNL PMID 31189652 JRNL DOI 10.1074/JBC.RA119.008133 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1-2575_2579: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.160 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 138012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5354 - 5.0741 0.99 4383 228 0.1490 0.1503 REMARK 3 2 5.0741 - 4.0287 0.99 4411 231 0.1064 0.1391 REMARK 3 3 4.0287 - 3.5197 0.99 4371 229 0.1289 0.1600 REMARK 3 4 3.5197 - 3.1981 0.98 4318 223 0.1342 0.1515 REMARK 3 5 3.1981 - 2.9689 0.99 4349 233 0.1442 0.1558 REMARK 3 6 2.9689 - 2.7939 0.99 4338 224 0.1462 0.1769 REMARK 3 7 2.7939 - 2.6540 0.99 4392 235 0.1450 0.1658 REMARK 3 8 2.6540 - 2.5385 0.99 4417 235 0.1527 0.2123 REMARK 3 9 2.5385 - 2.4408 1.00 4350 232 0.1592 0.2091 REMARK 3 10 2.4408 - 2.3566 0.99 4393 235 0.1534 0.2179 REMARK 3 11 2.3566 - 2.2829 1.00 4457 235 0.1487 0.1644 REMARK 3 12 2.2829 - 2.2177 0.99 4336 230 0.1539 0.1967 REMARK 3 13 2.2177 - 2.1593 1.00 4353 223 0.1568 0.2044 REMARK 3 14 2.1593 - 2.1066 1.00 4409 232 0.1621 0.1903 REMARK 3 15 2.1066 - 2.0587 0.99 4383 228 0.1687 0.2083 REMARK 3 16 2.0587 - 2.0149 1.00 4386 230 0.1769 0.2164 REMARK 3 17 2.0149 - 1.9746 1.00 4433 228 0.1789 0.2169 REMARK 3 18 1.9746 - 1.9373 1.00 4379 234 0.1756 0.2026 REMARK 3 19 1.9373 - 1.9027 0.99 4267 225 0.1817 0.1807 REMARK 3 20 1.9027 - 1.8705 1.00 4517 241 0.1834 0.2082 REMARK 3 21 1.8705 - 1.8403 1.00 4413 236 0.1971 0.2089 REMARK 3 22 1.8403 - 1.8120 1.00 4332 228 0.2117 0.2295 REMARK 3 23 1.8120 - 1.7854 1.00 4368 228 0.2236 0.2737 REMARK 3 24 1.7854 - 1.7602 0.99 4453 230 0.2338 0.2702 REMARK 3 25 1.7602 - 1.7364 1.00 4405 232 0.2684 0.3087 REMARK 3 26 1.7364 - 1.7139 1.00 4399 230 0.2919 0.2874 REMARK 3 27 1.7139 - 1.6924 1.00 4430 234 0.2739 0.3054 REMARK 3 28 1.6924 - 1.6721 1.00 4334 229 0.2631 0.2874 REMARK 3 29 1.6721 - 1.6526 0.99 4398 231 0.2727 0.3061 REMARK 3 30 1.6526 - 1.6340 0.88 3944 205 0.3121 0.3398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4132 REMARK 3 ANGLE : 1.126 5632 REMARK 3 CHIRALITY : 0.085 644 REMARK 3 PLANARITY : 0.007 732 REMARK 3 DIHEDRAL : 5.578 3210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841, 1.009, 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 138026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 47.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.510 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M SUCCINIC ACID PH 7.0, 0.1 M HEPES REMARK 280 PH 7.0, 1 %(W/V) PEG 2000 MME, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 75.81150 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 75.81150 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 75.81150 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 75.81150 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 75.81150 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 227.43450 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 151.62300 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 75.81150 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 151.62300 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -75.81150 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 227.43450 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 835 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 880 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 965 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 977 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 997 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1120 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1175 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 761 O HOH A 1065 2.00 REMARK 500 O HOH A 809 O HOH A 1126 2.01 REMARK 500 NZ LYS A 289 O HOH A 701 2.02 REMARK 500 O HOH A 985 O HOH A 1065 2.07 REMARK 500 O HOH A 741 O HOH A 870 2.11 REMARK 500 O HOH A 1060 O HOH A 1106 2.11 REMARK 500 OD1 ASP A 100 NZ LYS A 125 2.12 REMARK 500 O HOH A 1106 O HOH A 1173 2.13 REMARK 500 O HOH A 982 O HOH A 1085 2.16 REMARK 500 O HOH A 711 O HOH A 991 2.17 REMARK 500 O HOH A 1128 O HOH A 1173 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 820 O HOH A 820 10646 2.07 REMARK 500 O HOH A 708 O HOH A 708 16566 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 207 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 127 65.92 -117.53 REMARK 500 ALA A 159 97.13 -171.73 REMARK 500 TRP A 228 -139.86 -113.43 REMARK 500 GLN A 251 -123.85 -122.76 REMARK 500 ASN A 278 -113.29 -104.74 REMARK 500 ASN A 311 144.40 118.71 REMARK 500 ASP A 520 73.32 -152.52 REMARK 500 TYR A 526 61.53 -103.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1180 DISTANCE = 7.38 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 DBREF1 6F7D A 10 547 UNP A0A0C5PVE3_9CAUD DBREF2 6F7D A A0A0C5PVE3 261 798 SEQRES 1 A 538 GLY VAL ILE ASN PHE SER HIS ALA ASP THR TYR GLY ASN SEQRES 2 A 538 ASP SER VAL GLY ALA HIS LEU GLN ASN VAL VAL TYR PRO SEQRES 3 A 538 THR ASP ALA PRO PHE ASN ALA ALA THR ASP GLY THR THR SEQRES 4 A 538 ASP THR THR VAL ALA ILE LYS SER ALA ILE ALA HIS CYS SEQRES 5 A 538 ILE SER LYS GLY LYS LYS LEU VAL LEU ASN HIS LEU PHE SEQRES 6 A 538 MET ILE THR ASP THR LEU VAL ILE SER ASP GLY LEU HIS SEQRES 7 A 538 VAL GLU CYS LEU THR SER ASP SER GLY VAL LYS SER ASP SEQRES 8 A 538 VAL PRO ALA GLY LYS PHE ALA VAL LYS ILE THR GLY ALA SEQRES 9 A 538 ASN SER GLY TRP PHE GLY GLY LYS ILE LEU GLY LYS ASN SEQRES 10 A 538 LEU PRO GLU SER THR THR VAL ARG GLN ASP GLY VAL LEU SEQRES 11 A 538 PHE ASP GLU ASN ALA GLU TYR CYS PHE ILE THR GLY THR SEQRES 12 A 538 GLU VAL THR GLY PHE PHE ALA LYS GLY LEU HIS THR SER SEQRES 13 A 538 ASP ALA ASP GLY VAL GLY TYR GLY ILE TYR ASP LYS GLY SEQRES 14 A 538 TYR GLY THR LEU ILE SER LYS CYS TYR ALA ASN SER LYS SEQRES 15 A 538 PHE CYS VAL ALA LEU GLY GLY THR GLU GLY ARG VAL LEU SEQRES 16 A 538 LYS ASN ARG ILE THR ASN ASN TYR LEU THR SER GLY GLU SEQRES 17 A 538 ALA LYS PRO TRP SER TRP ALA SER ASN TYR TRP ASP GLY SEQRES 18 A 538 ILE VAL SER GLU ASN ALA HIS ARG TYR VAL ILE ALA PHE SEQRES 19 A 538 ASN ASP VAL SER ALA CYS GLY GLN SER GLY ILE TYR PHE SEQRES 20 A 538 GLY GLY ASN GLY GLY TYR SER THR ASP ASN ILE ILE VAL SEQRES 21 A 538 ASN ASN THR VAL TYR ALA CYS TRP ASN ARG GLY ILE ASP SEQRES 22 A 538 MET GLY LEU PHE SER GLU LYS SER ALA THR ASN ASP VAL SEQRES 23 A 538 LEU ARG ASN ILE ILE LYS GLY ASN ASN THR TYR ASN ASN SEQRES 24 A 538 ARG GLU ASN ASN ILE TRP LEU ALA GLY VAL SER ASN CYS SEQRES 25 A 538 SER VAL VAL GLY ASN THR SER TRP PHE ASP THR ASN TYR SEQRES 26 A 538 ASP VAL ILE PHE ALA GLY TYR PRO GLY GLY HIS ILE CYS SEQRES 27 A 538 ILE SER LEU ALA SER GLY ALA ASN GLY GLU ALA CYS VAL SEQRES 28 A 538 GLY ASN THR ILE ASP SER ASN THR CYS ILE ASP PRO ARG SEQRES 29 A 538 GLY ASN ALA GLY ILE THR VAL PRO THR GLY ALA THR GLY SEQRES 30 A 538 ASN VAL PHE GLY SER GLY ASN ASN LEU SER GLN ALA GLY SEQRES 31 A 538 ALA ILE TYR ILE ALA SER PRO ASP LEU ILE THR SER ASN SEQRES 32 A 538 ARG PHE GLU LEU ALA VAL THR GLY SER PHE THR PRO VAL SEQRES 33 A 538 LEU LEU PRO GLU SER GLY SER ILE THR LEU SER SER SER SEQRES 34 A 538 SER THR GLY VAL PHE ARG ALA THR GLY ASN ARG ILE ASP SEQRES 35 A 538 PHE SER VAL THR VAL ASN VAL SER SER ILE SER SER PRO SEQRES 36 A 538 SER GLY ASN LEU ASN ILE ALA TYR LEU PRO GLY MET SER SEQRES 37 A 538 GLY LYS THR SER SER THR SER MET PHE ILE ILE ASP TYR SEQRES 38 A 538 TRP ASN ASP LEU THR LEU SER SER GLY VAL ILE PRO LEU SEQRES 39 A 538 ALA SER LEU ASN LEU GLU ASN GLN ASP GLN ILE THR VAL SEQRES 40 A 538 TYR ARG THR ASP GLY GLY ARG VAL LEU TYR ASP PHE SER SEQRES 41 A 538 SER LEU MET LYS SER THR SER SER PHE ILE LEU LYS GLY SEQRES 42 A 538 PHE VAL ASP PHE ASN HET EDO A 601 4 HET EDO A 602 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *480(H2 O) HELIX 1 AA1 SER A 24 GLN A 30 1 7 HELIX 2 AA2 THR A 50 GLY A 65 1 16 HELIX 3 AA3 SER A 165 GLY A 169 5 5 HELIX 4 AA4 ASN A 211 SER A 215 5 5 HELIX 5 AA5 THR A 332 PHE A 338 1 7 HELIX 6 AA6 ASP A 407 ASN A 412 1 6 HELIX 7 AA7 ASP A 527 MET A 532 5 6 SHEET 1 A12 VAL A 32 TYR A 34 0 SHEET 2 A12 LYS A 67 LEU A 70 1 SHEET 3 A12 HIS A 87 CYS A 90 1 SHEET 4 A12 GLY A 116 PHE A 118 1 SHEET 5 A12 PHE A 148 THR A 150 1 SHEET 6 A12 LEU A 182 SER A 184 1 SHEET 7 A12 ARG A 202 LEU A 204 1 SHEET 8 A12 VAL A 240 ALA A 242 1 SHEET 9 A12 ILE A 267 VAL A 269 1 SHEET 10 A12 ILE A 299 LYS A 301 1 SHEET 11 A12 SER A 322 VAL A 324 1 SHEET 12 A12 THR A 363 ASP A 365 1 SHEET 1 B 5 LEU A 73 ILE A 76 0 SHEET 2 B 5 GLY A 96 SER A 99 1 SHEET 3 B 5 LYS A 121 LEU A 123 1 SHEET 4 B 5 GLU A 153 PHE A 157 1 SHEET 5 B 5 TYR A 187 SER A 190 1 SHEET 1 C10 LEU A 80 ILE A 82 0 SHEET 2 C10 VAL A 108 ILE A 110 1 SHEET 3 C10 VAL A 138 PHE A 140 1 SHEET 4 C10 ILE A 174 ASP A 176 1 SHEET 5 C10 VAL A 194 LEU A 196 1 SHEET 6 C10 ILE A 231 GLU A 234 1 SHEET 7 C10 ILE A 254 GLY A 257 1 SHEET 8 C10 ILE A 281 GLY A 284 1 SHEET 9 C10 ILE A 313 ALA A 316 1 SHEET 10 C10 ILE A 348 ALA A 351 1 SHEET 1 D 5 ASP A 245 SER A 247 0 SHEET 2 D 5 THR A 272 TYR A 274 1 SHEET 3 D 5 ASN A 304 TYR A 306 1 SHEET 4 D 5 THR A 327 TRP A 329 1 SHEET 5 D 5 THR A 368 ILE A 370 1 SHEET 1 E 2 TYR A 262 THR A 264 0 SHEET 2 E 2 ASP A 294 LEU A 296 1 SHEET 1 F 5 VAL A 418 PHE A 422 0 SHEET 2 F 5 THR A 440 THR A 446 -1 SHEET 3 F 5 ARG A 449 ASN A 457 -1 SHEET 4 F 5 SER A 537 ASP A 545 -1 SHEET 5 F 5 TYR A 490 ASN A 492 -1 SHEET 1 G 4 VAL A 425 PRO A 428 0 SHEET 2 G 4 LEU A 468 ALA A 471 -1 SHEET 3 G 4 ILE A 514 ARG A 518 -1 SHEET 4 G 4 PRO A 502 LEU A 506 -1 SHEET 1 H 2 ARG A 518 ASP A 520 0 SHEET 2 H 2 ARG A 523 LEU A 525 -1 SHEET 1 I 2 SER A 432 LEU A 435 0 SHEET 2 I 2 VAL A 458 SER A 462 -1 SHEET 1 J 2 SER A 481 ILE A 488 0 SHEET 2 J 2 LEU A 540 PHE A 546 -1 CISPEP 1 ALA A 38 PRO A 39 0 7.98 CISPEP 2 LYS A 219 PRO A 220 0 2.14 CISPEP 3 GLY A 257 GLY A 258 0 -10.18 CISPEP 4 ALA A 471 TYR A 472 0 -9.04 SITE 1 AC1 6 HIS A 163 TYR A 172 PHE A 192 HOH A 900 SITE 2 AC1 6 HOH A 921 HOH A1030 SITE 1 AC2 3 HOH A 706 HOH A 708 HOH A 970 CRYST1 151.623 151.623 151.623 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006595 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006595 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006595 0.00000