HEADER OXIDOREDUCTASE 12-DEC-17 6F8C TITLE CRYSTAL STRUCTURE OF CYTOCHROME P450 CYP260A1 (S276I) BOUND WITH TITLE 2 PROGESTERONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 CYP260A1; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SORANGIUM CELLULOSUM (STRAIN SO CE56); SOURCE 3 ORGANISM_COMMON: POLYANGIUM CELLULOSUM (STRAIN SO CE56); SOURCE 4 ORGANISM_TAXID: 448385; SOURCE 5 STRAIN: SO CE56; SOURCE 6 GENE: SCE1588; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS BACTERIAL PROTEINS, SORANGIUM CELLULOSUM, CYTOCHROME P-450 ENZYME KEYWDS 2 SYSTEM, CYTOCHROME P450, HYDROXYLATION, HEME, OXIDATION-REDUCTION, KEYWDS 3 PROGESTERONE, HISTIDINE, BIOCATALYSIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.K.JOZWIK,A.M.W.H.THUNNISSEN REVDAT 3 17-JAN-24 6F8C 1 REMARK REVDAT 2 02-MAY-18 6F8C 1 JRNL REVDAT 1 14-MAR-18 6F8C 0 JRNL AUTH Y.KHATRI,I.K.JOZWIK,M.RINGLE,I.A.IONESCU,M.LITZENBURGER, JRNL AUTH 2 M.C.HUTTER,A.W.H.THUNNISSEN,R.BERNHARDT JRNL TITL STRUCTURE-BASED ENGINEERING OF STEROIDOGENIC CYP260A1 FOR JRNL TITL 2 STEREO- AND REGIOSELECTIVE HYDROXYLATION OF PROGESTERONE. JRNL REF ACS CHEM. BIOL. V. 13 1021 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29509407 JRNL DOI 10.1021/ACSCHEMBIO.8B00026 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 59758 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 5655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4321 - 5.8998 0.99 3689 184 0.1555 0.1774 REMARK 3 2 5.8998 - 4.6843 1.00 3770 179 0.1503 0.1559 REMARK 3 3 4.6843 - 4.0926 1.00 3711 208 0.1397 0.1904 REMARK 3 4 4.0926 - 3.7186 0.99 3727 154 0.1555 0.1898 REMARK 3 5 3.7186 - 3.4521 0.99 3665 220 0.1699 0.2166 REMARK 3 6 3.4521 - 3.2487 0.99 3689 206 0.1835 0.2220 REMARK 3 7 3.2487 - 3.0860 0.99 3711 195 0.1887 0.2403 REMARK 3 8 3.0860 - 2.9517 0.99 3674 202 0.2074 0.2604 REMARK 3 9 2.9517 - 2.8381 1.00 3805 138 0.2152 0.2890 REMARK 3 10 2.8381 - 2.7402 0.99 3612 215 0.2075 0.2580 REMARK 3 11 2.7402 - 2.6545 0.99 3747 180 0.1979 0.2424 REMARK 3 12 2.6545 - 2.5786 0.99 3689 169 0.2003 0.2153 REMARK 3 13 2.5786 - 2.5107 1.00 3783 149 0.1970 0.2375 REMARK 3 14 2.5107 - 2.4495 1.00 3750 218 0.1900 0.2389 REMARK 3 15 2.4495 - 2.3938 1.00 3643 172 0.1952 0.2638 REMARK 3 16 2.3938 - 2.3429 0.99 3765 208 0.2058 0.2550 REMARK 3 17 2.3429 - 2.2960 0.99 3712 154 0.1930 0.2803 REMARK 3 18 2.2960 - 2.2527 1.00 3694 209 0.1946 0.2461 REMARK 3 19 2.2527 - 2.2124 1.00 3724 177 0.2035 0.2362 REMARK 3 20 2.2124 - 2.1749 0.99 3753 177 0.2142 0.2413 REMARK 3 21 2.1749 - 2.1399 0.99 3562 233 0.2293 0.2791 REMARK 3 22 2.1399 - 2.1069 0.99 3757 180 0.2263 0.2773 REMARK 3 23 2.1069 - 2.0759 0.99 3664 192 0.2260 0.2749 REMARK 3 24 2.0759 - 2.0467 0.99 3781 176 0.2303 0.2572 REMARK 3 25 2.0467 - 2.0190 0.99 3607 197 0.2379 0.2609 REMARK 3 26 2.0190 - 1.9928 0.99 3711 231 0.2354 0.2702 REMARK 3 27 1.9928 - 1.9679 0.99 3762 200 0.2530 0.3313 REMARK 3 28 1.9679 - 1.9442 0.99 3671 174 0.2684 0.2967 REMARK 3 29 1.9442 - 1.9216 0.99 3655 196 0.2641 0.3032 REMARK 3 30 1.9216 - 1.9000 0.99 3826 162 0.2697 0.3018 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 6444 REMARK 3 ANGLE : 1.449 8778 REMARK 3 CHIRALITY : 0.076 965 REMARK 3 PLANARITY : 0.009 1145 REMARK 3 DIHEDRAL : 15.368 2388 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F8C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007930. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59758 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LIV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE PH 6.5, 19% REMARK 280 (W/V) PEG 3350, 0.05 M MGCL2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.45350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.28250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.45350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.28250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 HIS A 398 REMARK 465 HIS A 399 REMARK 465 HIS A 400 REMARK 465 HIS B 395 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 HIS B 398 REMARK 465 HIS B 399 REMARK 465 HIS B 400 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 102 NH1 ARG B 106 2.00 REMARK 500 OE2 GLU A 173 NH1 ARG A 176 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR B 50 CB THR B 50 CG2 -0.223 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 85 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 22 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 85 CG - CD - NE ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG B 85 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 85 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 104 -24.12 -147.60 REMARK 500 PHE A 128 -65.33 -138.72 REMARK 500 TYR A 231 -70.41 -101.44 REMARK 500 ASP A 290 -126.26 56.64 REMARK 500 GLU A 369 -108.42 -93.69 REMARK 500 GLU A 370 114.01 -32.57 REMARK 500 PHE B 10 53.30 -91.64 REMARK 500 PHE B 128 -64.24 -135.23 REMARK 500 ARG B 164 75.77 -105.98 REMARK 500 TYR B 231 -71.84 -102.33 REMARK 500 ASP B 290 -125.48 56.09 REMARK 500 ALA B 303 72.13 -100.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 CYS A 301 15.81 REMARK 500 CYS A 301 14.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 340 SG REMARK 620 2 HEM A 501 NA 100.4 REMARK 620 3 HEM A 501 NB 93.2 87.1 REMARK 620 4 HEM A 501 NC 96.1 163.3 89.5 REMARK 620 5 HEM A 501 ND 105.8 89.7 161.0 88.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 340 SG REMARK 620 2 HEM B 501 NA 101.2 REMARK 620 3 HEM B 501 NB 92.1 87.5 REMARK 620 4 HEM B 501 NC 93.0 165.6 89.9 REMARK 620 5 HEM B 501 ND 102.2 90.9 165.7 88.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue STR A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue STR B 502 DBREF 6F8C A 1 394 UNP A9FDB7 A9FDB7_SORC5 1 394 DBREF 6F8C B 1 394 UNP A9FDB7 A9FDB7_SORC5 1 394 SEQADV 6F8C ILE A 276 UNP A9FDB7 SER 276 ENGINEERED MUTATION SEQADV 6F8C HIS A 395 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS A 396 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS A 397 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS A 398 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS A 399 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS A 400 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C ILE B 276 UNP A9FDB7 SER 276 ENGINEERED MUTATION SEQADV 6F8C HIS B 395 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS B 396 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS B 397 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS B 398 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS B 399 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8C HIS B 400 UNP A9FDB7 EXPRESSION TAG SEQRES 1 A 400 MET ASP PHE PRO LEU ALA ASN LEU PHE PHE VAL PRO SER SEQRES 2 A 400 GLU ASP ALA THR ALA PHE GLY ARG ARG LEU ARG ALA ALA SEQRES 3 A 400 ALA GLN GLN ALA PRO ILE VAL PHE ASP THR ALA PHE GLY SEQRES 4 A 400 MET PRO ILE LEU LEU ARG LYS SER HIS ILE THR THR ALA SEQRES 5 A 400 TYR ARG ASP THR ALA THR PHE SER THR ARG MET PHE GLN SEQRES 6 A 400 ALA GLY ILE LEU ASN GLY GLY LEU ALA ALA MET GLN GLY SEQRES 7 A 400 ASP GLU HIS ALA ARG MET ARG ARG VAL TYR ASN MET PHE SEQRES 8 A 400 PHE LEU PRO ARG ALA VAL SER GLN TYR GLU GLU ARG PHE SEQRES 9 A 400 VAL ARG PRO ILE SER GLU GLN VAL VAL ASP ARG LEU ALA SEQRES 10 A 400 GLY LYS PRO ARG VAL ASP LEU LEU GLU ASP PHE ALA MET SEQRES 11 A 400 GLU LEU PRO ARG ARG VAL ILE GLY GLU LEU PHE GLY PHE SEQRES 12 A 400 PRO ALA GLU LYS LEU HIS GLU THR ASP GLU ARG VAL ARG SEQRES 13 A 400 ALA MET LEU ARG GLY LEU VAL ARG MET HIS ASP PRO ALA SEQRES 14 A 400 ALA VAL ALA GLU SER GLN ARG ALA TYR GLY GLU THR LEU SEQRES 15 A 400 GLY LEU ILE THR GLU VAL VAL GLU ARG GLU SER ARG ASP SEQRES 16 A 400 THR SER ASP THR LEU LEU GLY GLU ILE LEU ARG THR LEU SEQRES 17 A 400 LYS ALA GLU HIS MET ASP THR ILE GLU ALA SER ARG GLN SEQRES 18 A 400 ILE VAL LEU SER LEU ILE LEU GLY GLY TYR GLU THR THR SEQRES 19 A 400 SER TRP LEU VAL ALA ASN THR ILE HIS ALA LEU LEU ALA SEQRES 20 A 400 HIS PRO ASP THR LEU ALA ARG VAL ARG GLN ASP PRO SER SEQRES 21 A 400 LEU LEU PRO ALA ALA ILE GLU GLU GLY MET ARG TRP CYS SEQRES 22 A 400 PRO SER ILE PHE GLY VAL LEU ARG MET VAL GLU ARG ASP SEQRES 23 A 400 VAL ARG LEU ASP ASP GLN ALA LEU SER ALA GLY THR VAL SEQRES 24 A 400 VAL CYS LEU ALA GLY ILE ALA GLY ASN TYR ASP GLU THR SEQRES 25 A 400 ALA TYR PRO SER PRO GLU VAL TYR ASP ILE ASP ARG LYS SEQRES 26 A 400 PRO LEU PRO ALA ALA ASN VAL PHE GLY GLY GLY ALA HIS SEQRES 27 A 400 PHE CYS VAL GLY ALA PRO LEU ALA ARG MET GLU ALA ARG SEQRES 28 A 400 VAL GLY LEU GLN ALA LEU LEU ALA ARG PHE PRO GLY LEU SEQRES 29 A 400 ARG ALA VAL PRO GLU GLU ARG PRO SER PHE MET TYR GLY SEQRES 30 A 400 ALA LYS ASP SER VAL ALA HIS GLY PRO ASP LYS LEU PRO SEQRES 31 A 400 VAL LEU LEU HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 400 MET ASP PHE PRO LEU ALA ASN LEU PHE PHE VAL PRO SER SEQRES 2 B 400 GLU ASP ALA THR ALA PHE GLY ARG ARG LEU ARG ALA ALA SEQRES 3 B 400 ALA GLN GLN ALA PRO ILE VAL PHE ASP THR ALA PHE GLY SEQRES 4 B 400 MET PRO ILE LEU LEU ARG LYS SER HIS ILE THR THR ALA SEQRES 5 B 400 TYR ARG ASP THR ALA THR PHE SER THR ARG MET PHE GLN SEQRES 6 B 400 ALA GLY ILE LEU ASN GLY GLY LEU ALA ALA MET GLN GLY SEQRES 7 B 400 ASP GLU HIS ALA ARG MET ARG ARG VAL TYR ASN MET PHE SEQRES 8 B 400 PHE LEU PRO ARG ALA VAL SER GLN TYR GLU GLU ARG PHE SEQRES 9 B 400 VAL ARG PRO ILE SER GLU GLN VAL VAL ASP ARG LEU ALA SEQRES 10 B 400 GLY LYS PRO ARG VAL ASP LEU LEU GLU ASP PHE ALA MET SEQRES 11 B 400 GLU LEU PRO ARG ARG VAL ILE GLY GLU LEU PHE GLY PHE SEQRES 12 B 400 PRO ALA GLU LYS LEU HIS GLU THR ASP GLU ARG VAL ARG SEQRES 13 B 400 ALA MET LEU ARG GLY LEU VAL ARG MET HIS ASP PRO ALA SEQRES 14 B 400 ALA VAL ALA GLU SER GLN ARG ALA TYR GLY GLU THR LEU SEQRES 15 B 400 GLY LEU ILE THR GLU VAL VAL GLU ARG GLU SER ARG ASP SEQRES 16 B 400 THR SER ASP THR LEU LEU GLY GLU ILE LEU ARG THR LEU SEQRES 17 B 400 LYS ALA GLU HIS MET ASP THR ILE GLU ALA SER ARG GLN SEQRES 18 B 400 ILE VAL LEU SER LEU ILE LEU GLY GLY TYR GLU THR THR SEQRES 19 B 400 SER TRP LEU VAL ALA ASN THR ILE HIS ALA LEU LEU ALA SEQRES 20 B 400 HIS PRO ASP THR LEU ALA ARG VAL ARG GLN ASP PRO SER SEQRES 21 B 400 LEU LEU PRO ALA ALA ILE GLU GLU GLY MET ARG TRP CYS SEQRES 22 B 400 PRO SER ILE PHE GLY VAL LEU ARG MET VAL GLU ARG ASP SEQRES 23 B 400 VAL ARG LEU ASP ASP GLN ALA LEU SER ALA GLY THR VAL SEQRES 24 B 400 VAL CYS LEU ALA GLY ILE ALA GLY ASN TYR ASP GLU THR SEQRES 25 B 400 ALA TYR PRO SER PRO GLU VAL TYR ASP ILE ASP ARG LYS SEQRES 26 B 400 PRO LEU PRO ALA ALA ASN VAL PHE GLY GLY GLY ALA HIS SEQRES 27 B 400 PHE CYS VAL GLY ALA PRO LEU ALA ARG MET GLU ALA ARG SEQRES 28 B 400 VAL GLY LEU GLN ALA LEU LEU ALA ARG PHE PRO GLY LEU SEQRES 29 B 400 ARG ALA VAL PRO GLU GLU ARG PRO SER PHE MET TYR GLY SEQRES 30 B 400 ALA LYS ASP SER VAL ALA HIS GLY PRO ASP LYS LEU PRO SEQRES 31 B 400 VAL LEU LEU HIS HIS HIS HIS HIS HIS HIS HET HEM A 501 43 HET STR A 502 23 HET HEM B 501 43 HET STR B 502 23 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM STR PROGESTERONE HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 STR 2(C21 H30 O2) FORMUL 7 HOH *417(H2 O) HELIX 1 AA1 THR A 17 ALA A 30 1 14 HELIX 2 AA2 ARG A 45 ASP A 55 1 11 HELIX 3 AA3 THR A 61 GLY A 67 5 7 HELIX 4 AA4 GLY A 72 MET A 76 5 5 HELIX 5 AA5 GLN A 77 PHE A 91 1 15 HELIX 6 AA6 LEU A 93 PHE A 104 1 12 HELIX 7 AA7 PHE A 104 ALA A 117 1 14 HELIX 8 AA8 LEU A 124 PHE A 128 1 5 HELIX 9 AA9 MET A 130 GLY A 142 1 13 HELIX 10 AB1 PRO A 144 GLU A 150 1 7 HELIX 11 AB2 THR A 151 ARG A 164 1 14 HELIX 12 AB3 ASP A 167 ARG A 194 1 28 HELIX 13 AB4 THR A 199 GLU A 211 1 13 HELIX 14 AB5 THR A 215 GLY A 229 1 15 HELIX 15 AB6 TYR A 231 ALA A 247 1 17 HELIX 16 AB7 HIS A 248 ASP A 258 1 11 HELIX 17 AB8 LEU A 261 CYS A 273 1 13 HELIX 18 AB9 GLY A 304 ASN A 308 5 5 HELIX 19 AC1 GLY A 335 PHE A 339 5 5 HELIX 20 AC2 GLY A 342 PHE A 361 1 20 HELIX 21 AC3 ALA A 378 SER A 381 5 4 HELIX 22 AC4 THR B 17 ALA B 30 1 14 HELIX 23 AC5 ARG B 45 ASP B 55 1 11 HELIX 24 AC6 THR B 61 GLY B 67 5 7 HELIX 25 AC7 GLY B 72 MET B 76 5 5 HELIX 26 AC8 GLN B 77 PHE B 91 1 15 HELIX 27 AC9 LEU B 93 PHE B 104 1 12 HELIX 28 AD1 PHE B 104 ARG B 115 1 12 HELIX 29 AD2 LEU B 124 PHE B 128 1 5 HELIX 30 AD3 MET B 130 GLY B 142 1 13 HELIX 31 AD4 PRO B 144 GLU B 150 1 7 HELIX 32 AD5 THR B 151 ARG B 164 1 14 HELIX 33 AD6 ASP B 167 SER B 193 1 27 HELIX 34 AD7 THR B 199 GLU B 211 1 13 HELIX 35 AD8 THR B 215 GLY B 229 1 15 HELIX 36 AD9 TYR B 231 ALA B 247 1 17 HELIX 37 AE1 HIS B 248 ASP B 258 1 11 HELIX 38 AE2 LEU B 261 CYS B 273 1 13 HELIX 39 AE3 GLY B 304 ASP B 310 5 7 HELIX 40 AE4 GLY B 335 PHE B 339 5 5 HELIX 41 AE5 GLY B 342 PHE B 361 1 20 HELIX 42 AE6 ALA B 378 SER B 381 5 4 SHEET 1 AA1 6 LEU A 5 ALA A 6 0 SHEET 2 AA1 6 ILE A 32 ASP A 35 1 O PHE A 34 N ALA A 6 SHEET 3 AA1 6 MET A 40 LEU A 43 -1 O ILE A 42 N VAL A 33 SHEET 4 AA1 6 VAL A 299 LEU A 302 1 O CYS A 301 N LEU A 43 SHEET 5 AA1 6 VAL A 279 VAL A 283 -1 N ARG A 281 O VAL A 300 SHEET 6 AA1 6 PHE A 59 SER A 60 -1 N SER A 60 O MET A 282 SHEET 1 AA2 3 ARG A 121 ASP A 123 0 SHEET 2 AA2 3 PRO A 390 LEU A 392 -1 O VAL A 391 N VAL A 122 SHEET 3 AA2 3 ARG A 365 ALA A 366 -1 N ARG A 365 O LEU A 392 SHEET 1 AA3 2 VAL A 287 LEU A 289 0 SHEET 2 AA3 2 GLN A 292 LEU A 294 -1 O GLN A 292 N LEU A 289 SHEET 1 AA4 2 PHE A 374 TYR A 376 0 SHEET 2 AA4 2 HIS A 384 PRO A 386 -1 O GLY A 385 N MET A 375 SHEET 1 AA5 6 LEU B 5 ALA B 6 0 SHEET 2 AA5 6 ILE B 32 ASP B 35 1 O PHE B 34 N ALA B 6 SHEET 3 AA5 6 MET B 40 LEU B 43 -1 O ILE B 42 N VAL B 33 SHEET 4 AA5 6 VAL B 299 LEU B 302 1 O CYS B 301 N LEU B 43 SHEET 5 AA5 6 VAL B 279 VAL B 283 -1 N VAL B 279 O LEU B 302 SHEET 6 AA5 6 PHE B 59 SER B 60 -1 N SER B 60 O MET B 282 SHEET 1 AA6 3 ARG B 121 ASP B 123 0 SHEET 2 AA6 3 PRO B 390 LEU B 392 -1 O VAL B 391 N VAL B 122 SHEET 3 AA6 3 ARG B 365 ALA B 366 -1 N ARG B 365 O LEU B 392 SHEET 1 AA7 2 VAL B 287 LEU B 289 0 SHEET 2 AA7 2 GLN B 292 LEU B 294 -1 O GLN B 292 N LEU B 289 SHEET 1 AA8 2 PHE B 374 TYR B 376 0 SHEET 2 AA8 2 HIS B 384 PRO B 386 -1 O GLY B 385 N MET B 375 LINK SG CYS A 340 FE HEM A 501 1555 1555 2.41 LINK SG CYS B 340 FE HEM B 501 1555 1555 2.32 CISPEP 1 LYS A 325 PRO A 326 0 -0.91 CISPEP 2 LYS B 325 PRO B 326 0 -6.68 SITE 1 AC1 27 LEU A 73 ALA A 74 HIS A 81 ARG A 85 SITE 2 AC1 27 PHE A 92 LEU A 226 GLY A 229 GLY A 230 SITE 3 AC1 27 THR A 233 THR A 234 LEU A 237 ILE A 276 SITE 4 AC1 27 GLY A 278 VAL A 279 ARG A 281 VAL A 332 SITE 5 AC1 27 PHE A 333 GLY A 334 GLY A 335 HIS A 338 SITE 6 AC1 27 CYS A 340 VAL A 341 GLY A 342 ALA A 346 SITE 7 AC1 27 STR A 502 HOH A 719 HOH A 730 SITE 1 AC2 8 ALA A 74 SER A 225 GLY A 229 THR A 233 SITE 2 AC2 8 ILE A 276 PHE A 277 GLY A 278 HEM A 501 SITE 1 AC3 22 LEU B 73 ALA B 74 HIS B 81 PHE B 92 SITE 2 AC3 22 LEU B 226 GLY B 229 GLY B 230 THR B 233 SITE 3 AC3 22 THR B 234 LEU B 237 VAL B 279 ARG B 281 SITE 4 AC3 22 VAL B 332 PHE B 333 GLY B 334 GLY B 335 SITE 5 AC3 22 HIS B 338 CYS B 340 ALA B 346 STR B 502 SITE 6 AC3 22 HOH B 737 HOH B 761 SITE 1 AC4 8 ALA B 74 SER B 225 GLY B 229 THR B 233 SITE 2 AC4 8 PHE B 277 GLY B 278 HEM B 501 HOH B 706 CRYST1 100.907 64.565 128.644 90.00 113.07 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009910 0.000000 0.004221 0.00000 SCALE2 0.000000 0.015488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008449 0.00000