HEADER HYDROLASE 15-DEC-17 6F9O TITLE CRYSTAL STRUCTURE OF COLD-ADAPTED HALOALKANE DEHALOGENASE DPCA FROM TITLE 2 PSYCHROBACTER CRYOHALOLENTIS K5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOALKANE DEHALOGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.8.1.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSYCHROBACTER CRYOHALOLENTIS (STRAIN K5); SOURCE 3 ORGANISM_TAXID: 335284; SOURCE 4 STRAIN: K5; SOURCE 5 GENE: DHMA, PCRYO_1253; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS MICROBIAL ENZYMES, HALOALKANE DEHALOGENASES, HLDS, ALPHA/BETA- KEYWDS 2 HYDROLASE FOLD ENZYMES, HYDROLASE, 2 DOMAINS, THE HIGHEST ACTIVITY KEYWDS 3 TOWARDS 1-BROMOBUTANE, 1-BROMOHEXANE AND 1, 3-DIBROMOPROPANE EXPDTA X-RAY DIFFRACTION AUTHOR K.TRATSIAK,T.PRUDNIKOVA,I.DRIENOVSKA,J.DAMBORSKY,J.BRYNDA,P.PACHL, AUTHOR 2 M.KUTY,R.CHALOUPKOVA,I.KUTA SMATANOVA,P.REZACOVA REVDAT 4 17-JAN-24 6F9O 1 REMARK REVDAT 3 15-MAY-19 6F9O 1 JRNL REVDAT 2 08-MAY-19 6F9O 1 JRNL REVDAT 1 27-FEB-19 6F9O 0 JRNL AUTH K.TRATSIAK,T.PRUDNIKOVA,I.DRIENOVSKA,J.DAMBORSKY,J.BRYNDA, JRNL AUTH 2 P.PACHL,M.KUTY,R.CHALOUPKOVA,P.REZACOVA,I.KUTA SMATANOVA JRNL TITL CRYSTAL STRUCTURE OF THE COLD-ADAPTED HALOALKANE JRNL TITL 2 DEHALOGENASE DPCA FROM PSYCHROBACTER CRYOHALOLENTIS K5. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 75 324 2019 JRNL REFN ESSN 2053-230X JRNL PMID 31045561 JRNL DOI 10.1107/S2053230X19002796 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.TRATSIAK,O.DEGTJARIK,I.DRIENOVSKA,L.CHRAST,P.REZACOVA, REMARK 1 AUTH 2 M.KUTY,R.CHALOUPKOVA,J.DAMBORSKY,I.KUTA SMATANOVA REMARK 1 TITL CRYSTALLOGRAPHIC ANALYSIS OF NEW PSYCHROPHILIC HALOALKANE REMARK 1 TITL 2 DEHALOGENASES: DPCA FROM PSYCHROBACTER CRYOHALOLENTIS K5 AND REMARK 1 TITL 3 DMXA FROM MARINOBACTER SP. ELB17. REMARK 1 REF ACTA CRYSTALLOGR. SECT. F V. 69 683 2013 REMARK 1 REF 2 STRUCT. BIOL. CRYST. COMMUN. REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 23722854 REMARK 1 DOI 10.1107/S1744309113012979 REMARK 1 REFERENCE 2 REMARK 1 AUTH I.DRIENOVSKA,E.CHOVANCOVA,T.KOUDELAKOVA,J.DAMBORSKY, REMARK 1 AUTH 2 R.CHALOUPKOVA REMARK 1 TITL BIOCHEMICAL CHARACTERIZATION OF A NOVEL HALOALKANE REMARK 1 TITL 2 DEHALOGENASE FROM A COLD-ADAPTED BACTERIUM. REMARK 1 REF APPL. ENVIRON. MICROBIOL. V. 78 4995 2012 REMARK 1 REFN ESSN 1098-5336 REMARK 1 PMID 22582053 REMARK 1 DOI 10.1128/AEM.00485-12 REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 114202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.111 REMARK 3 R VALUE (WORKING SET) : 0.110 REMARK 3 FREE R VALUE : 0.132 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6066 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4716 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 51.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 244 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2465 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 576 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.024 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.024 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.013 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.543 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.976 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2740 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2445 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3748 ; 1.634 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5721 ; 1.030 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 352 ; 6.086 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;33.671 ;24.058 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 442 ;12.244 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.682 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3156 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 570 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1324 ; 0.710 ; 0.645 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1323 ; 0.710 ; 0.645 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1683 ; 1.023 ; 0.978 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1684 ; 1.022 ; 0.979 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1416 ; 1.083 ; 0.804 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1416 ; 1.082 ; 0.804 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2059 ; 1.322 ; 1.147 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3451 ; 2.693 ;10.367 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3452 ; 2.693 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5182 ; 2.273 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 305 ;22.761 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5399 ; 7.178 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6F9O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6-5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978260 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SAGITALLY BENDED SI111 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 VERSION NOVEMBER 1, REMARK 200 2011 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 VERSION NOVEMBER 1, REMARK 200 2011 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 120315 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1B6G REMARK 200 REMARK 200 REMARK: NEEDLE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 30%(W/V) PEG REMARK 280 4000 AND 0.1 M SODIUM ACETATE TRIHYDRATE PH 4.6 AND WITH THE REMARK 280 ADDITION OF 0.6 UL OF 0.1M L-PROLINE (ADDITIVE SCREEN KIT, REMARK 280 HAMPTON RESEARCH) TO THE CRYSTALLIZATION DROP, PH 5.88, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.72550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1054 O HOH A 1057 1.51 REMARK 500 O HOH A 727 O HOH A 906 1.60 REMARK 500 O HOH A 961 O HOH A 1054 1.68 REMARK 500 O HOH A 781 O HOH A 1019 2.13 REMARK 500 OE1 GLN A 173 O HOH A 502 2.16 REMARK 500 O HOH A 522 O HOH A 861 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 18 33.00 -144.49 REMARK 500 SER A 29 -4.99 77.94 REMARK 500 SER A 32 -154.59 -141.13 REMARK 500 PRO A 56 57.73 -98.65 REMARK 500 SER A 57 -166.47 -102.09 REMARK 500 ASP A 123 -139.00 56.76 REMARK 500 ASP A 123 -134.04 48.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1076 DISTANCE = 5.82 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 405 REMARK 610 PEG A 406 REMARK 610 PEG A 407 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 408 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 261 O REMARK 620 2 THR A 267 OG1 64.0 REMARK 620 3 HOH A 727 O 63.5 122.6 REMARK 620 4 HOH A 892 O 154.8 125.9 111.5 REMARK 620 5 HOH A 906 O 80.0 143.5 33.3 84.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 408 DBREF 6F9O A 1 303 UNP Q1QBB9 DHMA_PSYCK 1 303 SEQADV 6F9O HIS A 304 UNP Q1QBB9 EXPRESSION TAG SEQADV 6F9O HIS A 305 UNP Q1QBB9 EXPRESSION TAG SEQADV 6F9O HIS A 306 UNP Q1QBB9 EXPRESSION TAG SEQADV 6F9O HIS A 307 UNP Q1QBB9 EXPRESSION TAG SEQADV 6F9O HIS A 308 UNP Q1QBB9 EXPRESSION TAG SEQADV 6F9O HIS A 309 UNP Q1QBB9 EXPRESSION TAG SEQRES 1 A 309 MET LYS ILE LEU ARG THR PRO ASP SER ARG PHE ALA ASN SEQRES 2 A 309 LEU PRO ASP TYR ASN PHE ASP PRO HIS TYR LEU MET VAL SEQRES 3 A 309 ASP ASP SER GLU ASP SER GLU LEU ARG VAL HIS TYR LEU SEQRES 4 A 309 ASP GLU GLY PRO ARG ASP ALA ASP PRO VAL LEU LEU LEU SEQRES 5 A 309 HIS GLY GLU PRO SER TRP CYS TYR LEU TYR ARG LYS MET SEQRES 6 A 309 ILE PRO ILE LEU THR ALA ALA GLY HIS ARG VAL ILE ALA SEQRES 7 A 309 PRO ASP LEU PRO GLY PHE GLY ARG SER ASP LYS PRO ALA SEQRES 8 A 309 SER ARG THR ASP TYR THR TYR GLN ARG HIS VAL ASN TRP SEQRES 9 A 309 MET GLN SER VAL LEU ASP GLN LEU ASP LEU ASN ASN ILE SEQRES 10 A 309 THR LEU PHE CYS GLN ASP TRP GLY GLY LEU ILE GLY LEU SEQRES 11 A 309 ARG LEU VAL ALA GLU ASN PRO ASP ARG PHE ALA ARG VAL SEQRES 12 A 309 ALA ALA GLY ASN THR MET LEU PRO THR GLY ASP HIS ASP SEQRES 13 A 309 LEU GLY GLU GLY PHE ARG LYS TRP GLN GLN PHE SER GLN SEQRES 14 A 309 GLU ILE PRO GLN PHE HIS VAL GLY GLY THR ILE LYS SER SEQRES 15 A 309 GLY THR VAL THR LYS LEU SER GLN ALA VAL ILE ASP ALA SEQRES 16 A 309 TYR ASN ALA PRO PHE PRO ASP GLU SER TYR LYS GLU GLY SEQRES 17 A 309 ALA ARG GLN PHE PRO LEU LEU VAL PRO SER THR PRO ASP SEQRES 18 A 309 ASP PRO ALA SER GLU ASN ASN ARG ALA ALA TRP ILE GLU SEQRES 19 A 309 LEU SER LYS TRP THR LYS PRO PHE ILE THR LEU PHE SER SEQRES 20 A 309 ASP SER ASP PRO VAL THR ALA GLY GLY ASP ARG ILE MET SEQRES 21 A 309 GLN LYS ILE ILE PRO GLY THR LYS GLY GLN ALA HIS THR SEQRES 22 A 309 THR ILE ALA ASN GLY GLY HIS PHE LEU GLN GLU ASP GLN SEQRES 23 A 309 GLY GLU LYS VAL ALA LYS LEU LEU VAL GLN PHE ILE HIS SEQRES 24 A 309 ASP ASN PRO ARG HIS HIS HIS HIS HIS HIS HET CL A 401 1 HET CL A 402 1 HET PEG A 403 7 HET PEG A 404 7 HET PEG A 405 4 HET PEG A 406 3 HET PEG A 407 4 HET NA A 408 1 HETNAM CL CHLORIDE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION FORMUL 2 CL 2(CL 1-) FORMUL 4 PEG 5(C4 H10 O3) FORMUL 9 NA NA 1+ FORMUL 10 HOH *576(H2 O) HELIX 1 AA1 PRO A 7 ALA A 12 5 6 HELIX 2 AA2 TRP A 58 ARG A 63 5 6 HELIX 3 AA3 MET A 65 ALA A 72 1 8 HELIX 4 AA4 SER A 92 TYR A 96 5 5 HELIX 5 AA5 THR A 97 ASP A 113 1 17 HELIX 6 AA6 ASP A 123 ASN A 136 1 14 HELIX 7 AA7 GLY A 158 ILE A 171 1 14 HELIX 8 AA8 HIS A 175 GLY A 183 1 9 HELIX 9 AA9 SER A 189 ALA A 198 1 10 HELIX 10 AB1 ASP A 202 TYR A 205 5 4 HELIX 11 AB2 LYS A 206 PHE A 212 1 7 HELIX 12 AB3 PRO A 213 VAL A 216 5 4 HELIX 13 AB4 ALA A 224 SER A 236 1 13 HELIX 14 AB5 GLY A 255 ILE A 264 1 10 HELIX 15 AB6 PRO A 265 LYS A 268 5 4 HELIX 16 AB7 PHE A 281 ASP A 300 1 20 SHEET 1 AA1 2 ILE A 3 LEU A 4 0 SHEET 2 AA1 2 LYS A 89 PRO A 90 -1 O LYS A 89 N LEU A 4 SHEET 1 AA2 7 HIS A 22 ASP A 27 0 SHEET 2 AA2 7 GLU A 33 GLU A 41 -1 O VAL A 36 N LEU A 24 SHEET 3 AA2 7 ARG A 75 PRO A 79 -1 O VAL A 76 N GLU A 41 SHEET 4 AA2 7 PRO A 48 LEU A 52 1 N LEU A 51 O ILE A 77 SHEET 5 AA2 7 ILE A 117 CYS A 121 1 O PHE A 120 N LEU A 50 SHEET 6 AA2 7 PHE A 140 ALA A 145 1 O ALA A 144 N LEU A 119 SHEET 7 AA2 7 PHE A 242 THR A 244 1 O ILE A 243 N VAL A 143 SHEET 1 AA3 2 SER A 247 SER A 249 0 SHEET 2 AA3 2 ILE A 275 GLY A 279 1 O ILE A 275 N ASP A 248 LINK O GLN A 261 NA NA A 408 1555 1555 3.02 LINK OG1 THR A 267 NA NA A 408 1555 1555 2.82 LINK NA NA A 408 O HOH A 727 1555 1555 2.92 LINK NA NA A 408 O HOH A 892 1555 1555 2.56 LINK NA NA A 408 O HOH A 906 1555 1555 2.43 CISPEP 1 GLU A 55 PRO A 56 0 -28.57 SITE 1 AC1 4 TRP A 124 TRP A 164 PRO A 213 HOH A 610 SITE 1 AC2 3 GLY A 177 GLY A 178 ASN A 197 SITE 1 AC3 5 THR A 94 HOH A 708 HOH A 782 HOH A 793 SITE 2 AC3 5 HOH A1058 SITE 1 AC4 10 ARG A 93 LEU A 214 HOH A 519 HOH A 528 SITE 2 AC4 10 HOH A 578 HOH A 713 HOH A 785 HOH A 851 SITE 3 AC4 10 HOH A 900 HOH A 934 SITE 1 AC5 4 GLU A 135 HOH A 693 HOH A 849 HOH A 860 SITE 1 AC6 3 PRO A 43 HOH A 573 HOH A 608 SITE 1 AC7 7 PRO A 21 ARG A 86 HOH A 506 HOH A 589 SITE 2 AC7 7 HOH A 597 HOH A 618 HOH A 916 SITE 1 AC8 6 GLN A 261 THR A 267 LYS A 268 HOH A 727 SITE 2 AC8 6 HOH A 892 HOH A 906 CRYST1 41.332 79.451 43.489 90.00 94.98 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024194 0.000000 0.002109 0.00000 SCALE2 0.000000 0.012586 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023081 0.00000