HEADER IMMUNOGLOBULIN 17-JAN-91 6FAB TITLE THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P- TITLE 2 AZOPHENYLARSONATE FAB 36-71. 1. X-RAY CRYSTALLOGRAPHY, TITLE 3 SITE-DIRECTED MUTAGENESIS, AND MODELING OF THE COMPLEX WITH TITLE 4 HAPTEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1-KAPPA 36-71 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG1-KAPPA 36-71 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR R.K.STRONG,D.R.ROSE,G.A.PETSKO,J.SHARON,M.N.MARGOLIES REVDAT 4 25-AUG-09 6FAB 1 SOURCE REVDAT 3 24-FEB-09 6FAB 1 VERSN REVDAT 2 15-MAY-95 6FAB 1 SEQRES REVDAT 1 15-JAN-93 6FAB 0 JRNL AUTH R.K.STRONG,R.CAMPBELL,D.R.ROSE,G.A.PETSKO,J.SHARON, JRNL AUTH 2 M.N.MARGOLIES JRNL TITL THREE-DIMENSIONAL STRUCTURE OF MURINE JRNL TITL 2 ANTI-P-AZOPHENYLARSONATE FAB 36-71. 1. X-RAY JRNL TITL 3 CRYSTALLOGRAPHY, SITE-DIRECTED MUTAGENESIS, AND JRNL TITL 4 MODELING OF THE COMPLEX WITH HAPTEN. JRNL REF BIOCHEMISTRY V. 30 3739 1991 JRNL REFN ISSN 0006-2960 JRNL PMID 2015229 JRNL DOI 10.1021/BI00229A022 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.K.STRONG,G.A.PETSKO,J.SHARON,M.N.MARGOLIES REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF MURINE REMARK 1 TITL 2 ANTI-P-AZOPHENYLARSONATE FAB 36-71. 2. STRUCTURAL REMARK 1 TITL 3 BASIS OF HAPTEN BINDING AND IDIOTYPY REMARK 1 REF BIOCHEMISTRY V. 30 3749 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.R.ROSE,R.K.STRONG,M.N.MARGOLIES,M.L.GEFTER, REMARK 1 AUTH 2 G.A.PETSKO REMARK 1 TITL CRYSTAL STRUCTURE OF THE ANTIGEN-BINDING FRAGMENT REMARK 1 TITL 2 OF THE MURINE ANTI-ARSONATE MONOCLONAL ANTIBODY REMARK 1 TITL 3 36-71 AT 2.9 ANGSTROMS RESOLUTION REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 87 338 1990 REMARK 1 REFN ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ, X-PLOR REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 70 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.019 ; NULL REMARK 3 ANGLE DISTANCE (A) : 3.990 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FAB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.52500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 198 NE2 HIS L 198 CD2 -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU L 11 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG L 18 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 TRP L 35 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP L 35 CG - CD1 - NE1 ANGL. DEV. = -7.0 DEGREES REMARK 500 THR L 51 CA - CB - OG1 ANGL. DEV. = -13.0 DEGREES REMARK 500 THR L 51 CA - CB - CG2 ANGL. DEV. = 10.0 DEGREES REMARK 500 THR L 51 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 SER L 52 CA - C - N ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP L 70 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 TYR L 86 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG L 96 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ALA L 112 CB - CA - C ANGL. DEV. = -10.4 DEGREES REMARK 500 ALA L 112 N - CA - CB ANGL. DEV. = 11.3 DEGREES REMARK 500 ILE L 117 CB - CA - C ANGL. DEV. = -13.4 DEGREES REMARK 500 TYR L 140 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 TRP L 148 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP L 148 CE2 - CD2 - CG ANGL. DEV. = -6.6 DEGREES REMARK 500 GLU L 154 N - CA - C ANGL. DEV. = 20.8 DEGREES REMARK 500 GLU L 154 CA - C - O ANGL. DEV. = 12.7 DEGREES REMARK 500 ARG L 155 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 GLU L 154 CA - C - N ANGL. DEV. = -20.5 DEGREES REMARK 500 TRP L 163 CD1 - CG - CD2 ANGL. DEV. = 8.8 DEGREES REMARK 500 TRP L 163 CG - CD1 - NE1 ANGL. DEV. = -6.7 DEGREES REMARK 500 TRP L 163 CE2 - CD2 - CG ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP L 167 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP L 170 CA - C - N ANGL. DEV. = 16.9 DEGREES REMARK 500 ASP L 170 O - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 MET L 175 CG - SD - CE ANGL. DEV. = -15.6 DEGREES REMARK 500 TYR L 192 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG L 211 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 CYS L 214 CA - CB - SG ANGL. DEV. = 8.5 DEGREES REMARK 500 GLU H 1 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 VAL H 9 CG1 - CB - CG2 ANGL. DEV. = -9.9 DEGREES REMARK 500 LEU H 11 CA - CB - CG ANGL. DEV. = 17.2 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 GLN H 43 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 GLN H 43 CA - C - N ANGL. DEV. = 12.1 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TYR H 50 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES REMARK 500 TYR H 57 N - CA - C ANGL. DEV. = 25.6 DEGREES REMARK 500 TYR H 80 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 MET H 81 CG - SD - CE ANGL. DEV. = -10.4 DEGREES REMARK 500 GLU H 89 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 TYR H 102 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 TRP H 111 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP H 111 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 SER H 136 N - CA - CB ANGL. DEV. = -9.5 DEGREES REMARK 500 GLY H 135 CA - C - N ANGL. DEV. = -14.4 DEGREES REMARK 500 GLY H 135 O - C - N ANGL. DEV. = 9.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 55 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE L 50 77.78 40.08 REMARK 500 SER L 52 -150.87 62.96 REMARK 500 ARG L 53 -54.87 62.03 REMARK 500 GLU L 81 4.16 -69.12 REMARK 500 ALA L 112 120.51 94.08 REMARK 500 SER L 153 -133.95 -137.83 REMARK 500 LYS L 169 -77.28 -82.75 REMARK 500 THR L 200 -4.83 -171.51 REMARK 500 GLU L 213 65.64 -107.76 REMARK 500 SER H 7 144.99 -179.65 REMARK 500 PRO H 41 -35.82 -33.92 REMARK 500 GLN H 43 -33.29 24.50 REMARK 500 TYR H 57 -98.26 -161.96 REMARK 500 LYS H 63 -47.70 142.22 REMARK 500 SER H 77 45.16 70.81 REMARK 500 SER H 85 80.85 48.66 REMARK 500 THR H 87 -168.98 -108.78 REMARK 500 SER H 136 -95.71 -5.90 REMARK 500 THR H 140 90.23 58.99 REMARK 500 SER H 142 -74.57 151.52 REMARK 500 LYS H 151 -73.26 -85.81 REMARK 500 GLN H 179 -123.14 -104.23 REMARK 500 ARG H 221 -112.93 95.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG L 155 GLN L 156 -138.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR L 192 0.08 SIDE_CHAIN REMARK 500 TYR H 106 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH L 635 DISTANCE = 5.13 ANGSTROMS DBREF 6FAB L 109 214 UNP P01837 KAC_MOUSE 1 106 DBREF 6FAB H 1 222 PDB 6FAB 6FAB 1 222 SEQRES 1 L 214 ASP ILE GLN MET THR GLN ILE PRO SER SER LEU SER ALA SEQRES 2 L 214 SER LEU GLY ASP ARG VAL SER ILE SER CYS ARG ALA SER SEQRES 3 L 214 GLN ASP ILE ASN ASN PHE LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO ASP GLY THR ILE LYS LEU LEU ILE TYR PHE THR SER SEQRES 5 L 214 ARG SER GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN LEU SEQRES 7 L 214 GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 L 214 ASN ALA LEU PRO ARG THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 222 GLU VAL GLN LEU GLN GLN SER GLY VAL GLU LEU VAL ARG SEQRES 2 H 222 ALA GLY SER SER VAL LYS MET SER CYS LYS ALA SER GLY SEQRES 3 H 222 TYR THR PHE THR SER ASN GLY ILE ASN TRP VAL LYS GLN SEQRES 4 H 222 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY TYR ASN ASN SEQRES 5 H 222 PRO GLY ASN GLY TYR ILE ALA TYR ASN GLU LYS PHE LYS SEQRES 6 H 222 GLY LYS THR THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 222 ALA TYR MET GLN LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 H 222 ALA VAL TYR PHE CYS ALA ARG SER GLU TYR TYR GLY GLY SEQRES 9 H 222 SER TYR LYS PHE ASP TYR TRP GLY GLN GLY THR THR LEU SEQRES 10 H 222 THR VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR SEQRES 11 H 222 PRO LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET SEQRES 12 H 222 VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU SEQRES 13 H 222 PRO VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER SEQRES 14 H 222 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU SEQRES 15 H 222 TYR THR LEU SER SER SER VAL THR VAL PRO SER SER PRO SEQRES 16 H 222 ARG PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO SEQRES 17 H 222 ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG SEQRES 18 H 222 ASP FORMUL 3 HOH *70(H2 O) HELIX 1 H1 SER L 121 GLY L 128 1 8 HELIX 2 H2 ASP L 184 GLU L 187 1 4 HELIX 3 H3 TYR H 94 ARG H 98 1 5 SHEET 1 A 4 MET L 4 ILE L 7 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 N SER L 22 O ILE L 7 SHEET 3 A 4 ASP L 70 ILE L 75 -1 N TYR L 71 O CYS L 23 SHEET 4 A 4 PHE L 62 SER L 67 -1 O SER L 63 N THR L 74 SHEET 1 B 5 SER L 54 GLN L 55 0 SHEET 2 B 5 ILE L 44 TYR L 49 -1 N TYR L 49 O SER L 54 SHEET 3 B 5 LEU L 33 GLN L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 B 5 THR L 85 GLN L 90 -1 O THR L 85 N GLN L 38 SHEET 5 B 5 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 C 6 SER L 54 GLN L 55 0 SHEET 2 C 6 ILE L 44 TYR L 49 -1 N TYR L 49 O SER L 54 SHEET 3 C 6 LEU L 33 GLN L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 C 6 THR L 85 GLN L 90 -1 O THR L 85 N GLN L 38 SHEET 5 C 6 THR L 102 ILE L 106 -1 N THR L 102 O TYR L 86 SHEET 6 C 6 SER L 10 ALA L 13 1 O LEU L 11 N GLU L 105 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 GLY L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 D 4 TYR L 173 THR L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 D 4 VAL L 159 TRP L 163 -1 N LEU L 160 O THR L 178 SHEET 1 E 3 ASN L 145 ILE L 150 0 SHEET 2 E 3 SER L 191 THR L 197 -1 N THR L 193 O LYS L 149 SHEET 3 E 3 ILE L 205 ASN L 210 -1 O ILE L 205 N ALA L 196 SHEET 1 F 4 GLN H 3 SER H 7 0 SHEET 2 F 4 VAL H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 F 4 THR H 78 LEU H 83 -1 N ALA H 79 O CYS H 22 SHEET 4 F 4 THR H 68 ASP H 73 -1 O THR H 69 N GLN H 82 SHEET 1 G 5 SER H 105 TRP H 111 0 SHEET 2 G 5 ALA H 92 TYR H 102 -1 N ARG H 98 O TYR H 110 SHEET 3 G 5 ILE H 34 GLN H 39 -1 N ASN H 35 O ALA H 97 SHEET 4 G 5 LEU H 45 ASN H 51 -1 O GLU H 46 N LYS H 38 SHEET 5 G 5 ILE H 58 TYR H 60 -1 O ALA H 59 N TYR H 50 SHEET 1 H 4 SER H 105 TRP H 111 0 SHEET 2 H 4 ALA H 92 TYR H 102 -1 N ARG H 98 O TYR H 110 SHEET 3 H 4 THR H 115 VAL H 119 -1 O THR H 115 N TYR H 94 SHEET 4 H 4 LEU H 11 VAL H 12 1 N VAL H 12 O THR H 118 SHEET 1 I 4 VAL H 129 LEU H 132 0 SHEET 2 I 4 MET H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 I 4 TYR H 183 PRO H 192 -1 N TYR H 183 O TYR H 153 SHEET 4 I 4 VAL H 171 THR H 173 -1 N HIS H 172 O SER H 188 SHEET 1 J 4 VAL H 129 LEU H 132 0 SHEET 2 J 4 MET H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 J 4 TYR H 183 PRO H 192 -1 N TYR H 183 O TYR H 153 SHEET 4 J 4 VAL H 177 LEU H 178 -1 N VAL H 177 O THR H 184 SHEET 1 K 3 THR H 159 TRP H 162 0 SHEET 2 K 3 THR H 202 HIS H 207 -1 N ASN H 204 O THR H 161 SHEET 3 K 3 THR H 212 LYS H 217 -1 O THR H 212 N HIS H 207 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.00 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.01 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.00 SSBOND 4 CYS H 148 CYS H 203 1555 1555 2.05 CISPEP 1 ILE L 7 PRO L 8 0 -11.88 CISPEP 2 LEU L 94 PRO L 95 0 -14.43 CISPEP 3 TYR L 140 PRO L 141 0 -2.91 CISPEP 4 PHE H 154 PRO H 155 0 -12.21 CISPEP 5 GLU H 156 PRO H 157 0 -5.22 CISPEP 6 ARG H 196 PRO H 197 0 0.10 CRYST1 67.130 73.050 46.780 90.00 104.48 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014896 0.000000 0.003847 0.00000 SCALE2 0.000000 0.013689 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022078 0.00000