HEADER TRANSPORT PROTEIN 15-DEC-17 6FAK TITLE HUMAN AFAMIN ORTHORHOMBIC CRYSTAL FORM BY CONTROLLED HYDRATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: AFAMIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-ALBUMIN,ALPHA-ALB; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: C-TERMINAL KGENLYFQ IS A TEV PROTEASE TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AFM, ALB2, ALBA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: AFM-PLENTI-III-EF1-ALPHA; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBACHBM/TOPO KEYWDS TRANSPORT PROTEIN, HUMAN PLASMA, WNT BINDING, LIPID BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.RUPP,A.NASCHBERGER,M.W.BOWLER REVDAT 7 07-FEB-24 6FAK 1 REMARK REVDAT 6 31-MAY-23 6FAK 1 HETSYN REVDAT 5 29-JUL-20 6FAK 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 08-JUL-20 6FAK 1 REMARK REVDAT 3 25-DEC-19 6FAK 1 JRNL REVDAT 2 30-JAN-19 6FAK 1 AUTHOR JRNL REVDAT 1 02-JAN-19 6FAK 0 JRNL AUTH A.NASCHBERGER,P.JUYOUX,J.VON VELSEN,B.RUPP,M.W.BOWLER JRNL TITL CONTROLLED DEHYDRATION, STRUCTURAL FLEXIBILITY AND JRNL TITL 2 GADOLINIUM MRI CONTRAST COMPOUND BINDING IN THE HUMAN PLASMA JRNL TITL 3 GLYCOPROTEIN AFAMIN. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 75 1071 2019 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 31793901 JRNL DOI 10.1107/S2059798319013500 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 45558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2460 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3225 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE SET COUNT : 171 REMARK 3 BIN FREE R VALUE : 0.4130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4637 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 198 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.31000 REMARK 3 B22 (A**2) : -1.37000 REMARK 3 B33 (A**2) : 2.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.689 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5180 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4709 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6978 ; 1.611 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11064 ; 1.041 ; 2.980 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 621 ; 5.898 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 253 ;36.615 ;25.217 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 915 ;16.421 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;19.434 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 749 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5662 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 994 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2428 ; 2.887 ; 3.266 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2426 ; 2.886 ; 3.262 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3064 ; 4.615 ; 8.492 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3065 ; 4.615 ; 8.493 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2752 ; 4.228 ; 4.626 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2752 ; 4.212 ; 4.627 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3914 ; 6.464 ;11.075 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5798 ; 9.543 ;24.570 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5777 ; 9.531 ;24.401 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 154 REMARK 3 RESIDUE RANGE : A 621 A 621 REMARK 3 ORIGIN FOR THE GROUP (A): -47.6040 14.7240 -15.2980 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.3150 REMARK 3 T33: 0.2749 T12: -0.0206 REMARK 3 T13: -0.0259 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.5909 L22: 0.6350 REMARK 3 L33: 1.0041 L12: 0.2246 REMARK 3 L13: -0.6204 L23: 0.1701 REMARK 3 S TENSOR REMARK 3 S11: -0.0667 S12: 0.1226 S13: -0.0111 REMARK 3 S21: -0.0589 S22: 0.0488 S23: 0.0689 REMARK 3 S31: 0.0434 S32: -0.2259 S33: 0.0179 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 390 REMARK 3 RESIDUE RANGE : A 641 A 643 REMARK 3 ORIGIN FOR THE GROUP (A): -25.3260 35.3020 -13.4920 REMARK 3 T TENSOR REMARK 3 T11: 0.3467 T22: 0.2402 REMARK 3 T33: 0.2741 T12: 0.0216 REMARK 3 T13: -0.0004 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.1697 L22: 0.6746 REMARK 3 L33: 0.1762 L12: 0.2112 REMARK 3 L13: 0.0669 L23: 0.3228 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: 0.0423 S13: 0.0378 REMARK 3 S21: -0.1078 S22: -0.0010 S23: -0.0574 REMARK 3 S31: -0.0541 S32: -0.0235 S33: 0.0025 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 391 A 562 REMARK 3 RESIDUE RANGE : A 651 A 652 REMARK 3 ORIGIN FOR THE GROUP (A): -14.7810 10.5480 -4.2250 REMARK 3 T TENSOR REMARK 3 T11: 0.2841 T22: 0.2539 REMARK 3 T33: 0.2976 T12: 0.0154 REMARK 3 T13: -0.0022 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.2124 L22: 0.9590 REMARK 3 L33: 0.4069 L12: -0.3907 REMARK 3 L13: -0.0107 L23: -0.2420 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: 0.0476 S13: 0.0015 REMARK 3 S21: 0.0080 S22: -0.0751 S23: -0.0669 REMARK 3 S31: 0.0276 S32: 0.0321 S33: 0.0217 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 563 A 586 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7450 -12.6320 -1.3720 REMARK 3 T TENSOR REMARK 3 T11: 0.4903 T22: 0.0435 REMARK 3 T33: 0.8136 T12: -0.1211 REMARK 3 T13: -0.4176 T23: 0.1813 REMARK 3 L TENSOR REMARK 3 L11: 12.2911 L22: 2.6545 REMARK 3 L33: 3.4090 L12: -4.4424 REMARK 3 L13: -6.2937 L23: 2.7161 REMARK 3 S TENSOR REMARK 3 S11: -0.2197 S12: -0.2490 S13: -1.3391 REMARK 3 S21: 0.7352 S22: -0.1167 S23: -0.3188 REMARK 3 S31: 0.3798 S32: 0.0429 S33: 0.3364 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FAK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : C110 REMARK 200 OPTICS : BE CRL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48102 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 78.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.550 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.36 REMARK 200 R MERGE FOR SHELL (I) : 0.86800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 2VUE REMARK 200 REMARK 200 REMARK: ANISOTROPIC, NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 % PEG 1000, 270 MM CH3COONH4, 3% 6 REMARK 280 -AMINOHEXANOIC ACID (ACA). 1.5 UL 5 MG/ML STOCK + 1.5 UL REMARK 280 PRECIPITANT. STREAK SEEDING FOLLOWED BY MICRO-SEEDING REMARK 280 IMMEDIATELY AFTER PIPETTING WITH NO PRE-EQUILIBRATION OF THE REMARK 280 DROP. CONTROLLED HYDRATION EXPERIMENT FOR DATA COLLECTION., PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.88650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.66250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.88650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.66250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 5 REMARK 465 ARG A 6 REMARK 465 ASP A 7 REMARK 465 ILE A 8 REMARK 465 GLU A 9 REMARK 465 ASN A 10 REMARK 465 PHE A 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 59 87.17 -152.44 REMARK 500 ASP A 97 -126.27 46.75 REMARK 500 ASN A 133 68.93 178.53 REMARK 500 ILE A 274 -60.02 -141.32 REMARK 500 LYS A 277 42.41 -108.20 REMARK 500 ILE A 278 32.07 -144.93 REMARK 500 LYS A 284 168.20 -41.17 REMARK 500 PRO A 302 108.96 -49.66 REMARK 500 LYS A 303 -40.84 -25.31 REMARK 500 ASP A 325 80.02 -167.73 REMARK 500 THR A 442 -9.77 79.48 REMARK 500 GLU A 445 48.73 -105.05 REMARK 500 VAL A 464 -61.37 -98.49 REMARK 500 ILE A 470 -66.57 -93.37 REMARK 500 ASN A 481 101.34 96.23 REMARK 500 ASN A 481 99.73 -174.60 REMARK 500 GLN A 516 174.75 174.75 REMARK 500 ASN A 519 -75.97 -80.56 REMARK 500 ALA A 562 -23.44 -149.61 REMARK 500 GLU A 563 127.04 62.57 REMARK 500 SER A 564 70.33 53.62 REMARK 500 LYS A 579 -38.10 -38.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P6G A 805 REMARK 610 PEG A 811 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 802 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 113 O REMARK 620 2 LEU A 115 O 89.4 REMARK 620 3 HOH A 943 O 105.5 80.7 REMARK 620 4 HOH A1013 O 112.7 81.8 137.5 REMARK 620 5 HOH A1033 O 72.6 147.7 129.4 80.9 REMARK 620 6 HOH A1073 O 140.1 125.9 68.0 92.5 82.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OKL RELATED DB: PDB REMARK 900 MONOCLINIC AFAMIN FORM DBREF 6FAK A 1 578 UNP P43652 AFAM_HUMAN 22 599 SEQADV 6FAK LYS A 579 UNP P43652 EXPRESSION TAG SEQADV 6FAK GLY A 580 UNP P43652 EXPRESSION TAG SEQADV 6FAK GLU A 581 UNP P43652 EXPRESSION TAG SEQADV 6FAK ASN A 582 UNP P43652 EXPRESSION TAG SEQADV 6FAK LEU A 583 UNP P43652 EXPRESSION TAG SEQADV 6FAK TYR A 584 UNP P43652 EXPRESSION TAG SEQADV 6FAK PHE A 585 UNP P43652 EXPRESSION TAG SEQADV 6FAK GLN A 586 UNP P43652 EXPRESSION TAG SEQRES 1 A 586 LEU PRO THR GLN PRO ARG ASP ILE GLU ASN PHE ASN SER SEQRES 2 A 586 THR GLN LYS PHE ILE GLU ASP ASN ILE GLU TYR ILE THR SEQRES 3 A 586 ILE ILE ALA PHE ALA GLN TYR VAL GLN GLU ALA THR PHE SEQRES 4 A 586 GLU GLU MET GLU LYS LEU VAL LYS ASP MET VAL GLU TYR SEQRES 5 A 586 LYS ASP ARG CYS MET ALA ASP LYS THR LEU PRO GLU CYS SEQRES 6 A 586 SER LYS LEU PRO ASN ASN VAL LEU GLN GLU LYS ILE CYS SEQRES 7 A 586 ALA MET GLU GLY LEU PRO GLN LYS HIS ASN PHE SER HIS SEQRES 8 A 586 CYS CYS SER LYS VAL ASP ALA GLN ARG ARG LEU CYS PHE SEQRES 9 A 586 PHE TYR ASN LYS LYS SER ASP VAL GLY PHE LEU PRO PRO SEQRES 10 A 586 PHE PRO THR LEU ASP PRO GLU GLU LYS CYS GLN ALA TYR SEQRES 11 A 586 GLU SER ASN ARG GLU SER LEU LEU ASN HIS PHE LEU TYR SEQRES 12 A 586 GLU VAL ALA ARG ARG ASN PRO PHE VAL PHE ALA PRO THR SEQRES 13 A 586 LEU LEU THR VAL ALA VAL HIS PHE GLU GLU VAL ALA LYS SEQRES 14 A 586 SER CYS CYS GLU GLU GLN ASN LYS VAL ASN CYS LEU GLN SEQRES 15 A 586 THR ARG ALA ILE PRO VAL THR GLN TYR LEU LYS ALA PHE SEQRES 16 A 586 SER SER TYR GLN LYS HIS VAL CYS GLY ALA LEU LEU LYS SEQRES 17 A 586 PHE GLY THR LYS VAL VAL HIS PHE ILE TYR ILE ALA ILE SEQRES 18 A 586 LEU SER GLN LYS PHE PRO LYS ILE GLU PHE LYS GLU LEU SEQRES 19 A 586 ILE SER LEU VAL GLU ASP VAL SER SER ASN TYR ASP GLY SEQRES 20 A 586 CYS CYS GLU GLY ASP VAL VAL GLN CYS ILE ARG ASP THR SEQRES 21 A 586 SER LYS VAL MET ASN HIS ILE CYS SER LYS GLN ASP SER SEQRES 22 A 586 ILE SER SER LYS ILE LYS GLU CYS CYS GLU LYS LYS ILE SEQRES 23 A 586 PRO GLU ARG GLY GLN CYS ILE ILE ASN SER ASN LYS ASP SEQRES 24 A 586 ASP ARG PRO LYS ASP LEU SER LEU ARG GLU GLY LYS PHE SEQRES 25 A 586 THR ASP SER GLU ASN VAL CYS GLN GLU ARG ASP ALA ASP SEQRES 26 A 586 PRO ASP THR PHE PHE ALA LYS PHE THR PHE GLU TYR SER SEQRES 27 A 586 ARG ARG HIS PRO ASP LEU SER ILE PRO GLU LEU LEU ARG SEQRES 28 A 586 ILE VAL GLN ILE TYR LYS ASP LEU LEU ARG ASN CYS CYS SEQRES 29 A 586 ASN THR GLU ASN PRO PRO GLY CYS TYR ARG TYR ALA GLU SEQRES 30 A 586 ASP LYS PHE ASN GLU THR THR GLU LYS SER LEU LYS MET SEQRES 31 A 586 VAL GLN GLN GLU CYS LYS HIS PHE GLN ASN LEU GLY LYS SEQRES 32 A 586 ASP GLY LEU LYS TYR HIS TYR LEU ILE ARG LEU THR LYS SEQRES 33 A 586 ILE ALA PRO GLN LEU SER THR GLU GLU LEU VAL SER LEU SEQRES 34 A 586 GLY GLU LYS MET VAL THR ALA PHE THR THR CYS CYS THR SEQRES 35 A 586 LEU SER GLU GLU PHE ALA CYS VAL ASP ASN LEU ALA ASP SEQRES 36 A 586 LEU VAL PHE GLY GLU LEU CYS GLY VAL ASN GLU ASN ARG SEQRES 37 A 586 THR ILE ASN PRO ALA VAL ASP HIS CYS CYS LYS THR ASN SEQRES 38 A 586 PHE ALA PHE ARG ARG PRO CYS PHE GLU SER LEU LYS ALA SEQRES 39 A 586 ASP LYS THR TYR VAL PRO PRO PRO PHE SER GLN ASP LEU SEQRES 40 A 586 PHE THR PHE HIS ALA ASP MET CYS GLN SER GLN ASN GLU SEQRES 41 A 586 GLU LEU GLN ARG LYS THR ASP ARG PHE LEU VAL ASN LEU SEQRES 42 A 586 VAL LYS LEU LYS HIS GLU LEU THR ASP GLU GLU LEU GLN SEQRES 43 A 586 SER LEU PHE THR ASN PHE ALA ASN VAL VAL ASP LYS CYS SEQRES 44 A 586 CYS LYS ALA GLU SER PRO GLU VAL CYS PHE ASN GLU GLU SEQRES 45 A 586 SER PRO LYS ILE GLY ASN LYS GLY GLU ASN LEU TYR PHE SEQRES 46 A 586 GLN HET NAG B 1 14 HET NAG B 2 14 HET NAG A 621 14 HET NAG A 641 14 HET CL A 801 1 HET NA A 802 1 HET ACT A 803 4 HET P6G A 804 19 HET P6G A 805 18 HET PG4 A 806 13 HET PG4 A 807 13 HET PGE A 808 10 HET PGE A 809 10 HET PEG A 810 7 HET PEG A 811 6 HET PEG A 812 7 HET PEG A 813 7 HET PG6 A 814 18 HET EDO A 815 4 HET EDO A 816 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM ACT ACETATE ION HETNAM P6G HEXAETHYLENE GLYCOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG6 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]- HETNAM 2 PG6 ETHOXY}-ETHANE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 5 CL CL 1- FORMUL 6 NA NA 1+ FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 P6G 2(C12 H26 O7) FORMUL 10 PG4 2(C8 H18 O5) FORMUL 12 PGE 2(C6 H14 O4) FORMUL 14 PEG 4(C4 H10 O3) FORMUL 18 PG6 C12 H26 O6 FORMUL 19 EDO 2(C2 H6 O2) FORMUL 21 HOH *242(H2 O) HELIX 1 AA1 ASN A 12 ASN A 21 1 10 HELIX 2 AA2 ASN A 21 VAL A 34 1 14 HELIX 3 AA3 THR A 38 ASP A 59 1 22 HELIX 4 AA4 LEU A 62 LYS A 67 5 6 HELIX 5 AA5 LEU A 68 ALA A 79 1 12 HELIX 6 AA6 GLY A 82 HIS A 87 1 6 HELIX 7 AA7 PHE A 89 SER A 94 1 6 HELIX 8 AA8 VAL A 96 ASN A 107 1 12 HELIX 9 AA9 ASP A 122 ASN A 133 1 12 HELIX 10 AB1 ASN A 133 ASN A 149 1 17 HELIX 11 AB2 PHE A 153 CYS A 172 1 20 HELIX 12 AB3 ASN A 176 GLY A 210 1 35 HELIX 13 AB4 GLY A 210 HIS A 215 1 6 HELIX 14 AB5 HIS A 215 PHE A 226 1 12 HELIX 15 AB6 GLU A 230 GLY A 251 1 22 HELIX 16 AB7 ASP A 252 SER A 269 1 18 HELIX 17 AB8 PRO A 287 SER A 296 1 10 HELIX 18 AB9 ASN A 317 ASP A 325 1 9 HELIX 19 AC1 ASP A 325 ARG A 340 1 16 HELIX 20 AC2 SER A 345 CYS A 364 1 20 HELIX 21 AC3 ASN A 368 ARG A 374 1 7 HELIX 22 AC4 TYR A 375 ALA A 418 1 44 HELIX 23 AC5 SER A 422 CYS A 441 1 20 HELIX 24 AC6 GLU A 445 GLY A 463 1 19 HELIX 25 AC7 ASN A 471 THR A 480 1 10 HELIX 26 AC8 PHE A 484 SER A 491 1 8 HELIX 27 AC9 ASP A 506 THR A 509 5 4 HELIX 28 AD1 HIS A 511 CYS A 515 5 5 HELIX 29 AD2 GLU A 520 LYS A 537 1 18 HELIX 30 AD3 THR A 541 LYS A 561 1 21 HELIX 31 AD4 SER A 564 SER A 573 1 10 SHEET 1 AA1 2 PHE A 503 SER A 504 0 SHEET 2 AA1 2 TYR A 584 PHE A 585 -1 O PHE A 585 N PHE A 503 SSBOND 1 CYS A 56 CYS A 65 1555 1555 2.04 SSBOND 2 CYS A 78 CYS A 93 1555 1555 2.05 SSBOND 3 CYS A 92 CYS A 103 1555 1555 2.16 SSBOND 4 CYS A 127 CYS A 172 1555 1555 2.04 SSBOND 5 CYS A 171 CYS A 180 1555 1555 2.07 SSBOND 6 CYS A 203 CYS A 249 1555 1555 2.02 SSBOND 7 CYS A 248 CYS A 256 1555 1555 2.07 SSBOND 8 CYS A 268 CYS A 282 1555 1555 2.05 SSBOND 9 CYS A 281 CYS A 292 1555 1555 2.04 SSBOND 10 CYS A 319 CYS A 364 1555 1555 1.99 SSBOND 11 CYS A 363 CYS A 372 1555 1555 2.08 SSBOND 12 CYS A 395 CYS A 441 1555 1555 2.12 SSBOND 13 CYS A 440 CYS A 449 1555 1555 1.99 SSBOND 14 CYS A 462 CYS A 478 1555 1555 2.08 SSBOND 15 CYS A 477 CYS A 488 1555 1555 2.11 SSBOND 16 CYS A 515 CYS A 560 1555 1555 2.05 SSBOND 17 CYS A 559 CYS A 568 1555 1555 2.05 LINK ND2 ASN A 88 C1 NAG A 621 1555 1555 1.47 LINK ND2 ASN A 381 C1 NAG A 641 1555 1555 1.46 LINK ND2 ASN A 467 C1 NAG B 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 LINK O GLY A 113 NA NA A 802 1555 1555 2.54 LINK O LEU A 115 NA NA A 802 1555 1555 2.53 LINK NA NA A 802 O HOH A 943 1555 3445 2.15 LINK NA NA A 802 O HOH A1013 1555 1555 2.36 LINK NA NA A 802 O HOH A1033 1555 3445 2.56 LINK NA NA A 802 O HOH A1073 1555 3445 2.61 CISPEP 1 ILE A 286 PRO A 287 0 -4.30 CRYST1 109.773 113.325 48.796 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009110 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020493 0.00000