HEADER DNA BINDING PROTEIN 18-DEC-17 6FB5 TITLE CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN TITLE 2 (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA TITLE 3 (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF TITLE 4 MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: I-CREI MONOMER A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: I-CREI MONOMER B; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'- COMPND 11 D(*TP*CP*AP*GP*AP*CP*TP*TP*GP*TP*CP*CP*AP*CP*AP*GP*GP*AP*GP*TP*CP*AP* COMPND 12 GP*A)-3'); COMPND 13 CHAIN: D; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'- COMPND 17 D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*GP*AP*CP*AP*AP*GP*TP*CP*TP* COMPND 18 GP*A)-3'); COMPND 19 CHAIN: F; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 8 ORGANISM_TAXID: 3055; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS CHLAMYDOMONAS REINHARDTII, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.MOLINA,J.PRIETO REVDAT 2 17-JAN-24 6FB5 1 LINK REVDAT 1 18-JUL-18 6FB5 0 JRNL AUTH J.PRIETO,P.REDONDO,B.LOPEZ-MENDEZ,M.D'ABRAMO,N.MERINO, JRNL AUTH 2 F.J.BLANCO,P.DUCHATEAU,G.MONTOYA,R.MOLINA JRNL TITL UNDERSTANDING THE INDIRECT DNA READ-OUT SPECIFICITY OF JRNL TITL 2 I-CREI MEGANUCLEASE. JRNL REF SCI REP V. 8 10286 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29980759 JRNL DOI 10.1038/S41598-018-28599-0 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 47710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.880 REMARK 3 FREE R VALUE TEST SET COUNT : 3761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7381 - 6.5888 0.98 1684 146 0.1585 0.2014 REMARK 3 2 6.5888 - 5.2342 0.98 1667 141 0.1852 0.1668 REMARK 3 3 5.2342 - 4.5738 0.95 1631 146 0.1601 0.1810 REMARK 3 4 4.5738 - 4.1562 0.98 1663 142 0.1460 0.1452 REMARK 3 5 4.1562 - 3.8586 0.98 1676 143 0.1482 0.1971 REMARK 3 6 3.8586 - 3.6313 0.98 1681 147 0.1701 0.1764 REMARK 3 7 3.6313 - 3.4496 0.95 1590 132 0.1647 0.1988 REMARK 3 8 3.4496 - 3.2995 0.96 1662 146 0.1642 0.2041 REMARK 3 9 3.2995 - 3.1726 0.97 1642 141 0.1842 0.2219 REMARK 3 10 3.1726 - 3.0631 0.96 1623 142 0.2075 0.2114 REMARK 3 11 3.0631 - 2.9674 0.98 1676 145 0.2158 0.2563 REMARK 3 12 2.9674 - 2.8826 0.98 1705 143 0.2165 0.2856 REMARK 3 13 2.8826 - 2.8067 0.98 1629 139 0.2284 0.2915 REMARK 3 14 2.8067 - 2.7383 0.94 1640 141 0.2323 0.2510 REMARK 3 15 2.7383 - 2.6761 0.95 1601 135 0.2195 0.2574 REMARK 3 16 2.6761 - 2.6191 0.95 1624 141 0.2209 0.2662 REMARK 3 17 2.6191 - 2.5667 0.97 1653 149 0.2365 0.2623 REMARK 3 18 2.5667 - 2.5183 0.96 1630 136 0.2318 0.3172 REMARK 3 19 2.5183 - 2.4733 0.97 1666 140 0.2366 0.2738 REMARK 3 20 2.4733 - 2.4314 0.96 1654 145 0.2358 0.2782 REMARK 3 21 2.4314 - 2.3922 0.97 1637 138 0.2355 0.2916 REMARK 3 22 2.3922 - 2.3554 0.98 1698 142 0.2363 0.3197 REMARK 3 23 2.3554 - 2.3208 0.98 1664 142 0.2496 0.3028 REMARK 3 24 2.3208 - 2.2881 0.97 1647 139 0.2567 0.3538 REMARK 3 25 2.2881 - 2.2572 0.92 1529 132 0.2618 0.2899 REMARK 3 26 2.2572 - 2.2279 0.90 1591 132 0.2600 0.2776 REMARK 3 27 2.2279 - 2.2000 0.70 1186 96 0.2726 0.3480 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.021 3657 REMARK 3 ANGLE : 0.821 5183 REMARK 3 CHIRALITY : 0.043 583 REMARK 3 PLANARITY : 0.003 475 REMARK 3 DIHEDRAL : 20.399 1424 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 2.2803 15.9742 102.4959 REMARK 3 T TENSOR REMARK 3 T11: 0.1002 T22: 0.1260 REMARK 3 T33: 0.1177 T12: -0.0040 REMARK 3 T13: 0.0233 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.7205 L22: 0.8694 REMARK 3 L33: 1.3710 L12: -0.4469 REMARK 3 L13: 0.5751 L23: -0.3636 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.0206 S13: 0.1117 REMARK 3 S21: 0.0528 S22: -0.1346 S23: -0.0242 REMARK 3 S31: -0.0180 S32: 0.1097 S33: 0.0300 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200008034. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47710 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 41.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1G9Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CALCIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.6-5.4, 33-40% (V/V) 1,2-PROPANEDIOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.00250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 308 O HOH B 341 2.08 REMARK 500 OD1 ASP B 20 O HOH B 301 2.10 REMARK 500 OP2 DA D 515 O HOH B 301 2.13 REMARK 500 OD1 ASP A 20 O HOH B 301 2.14 REMARK 500 OP2 DA F 615 O HOH B 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG D 504 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC D 506 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DA D 524 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC F 606 C1' - O4' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DC F 606 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -62.76 -96.60 REMARK 500 SER A 70 103.42 -162.86 REMARK 500 LYS A 116 34.25 -88.43 REMARK 500 GLU A 117 -63.92 -123.97 REMARK 500 LYS B 116 35.86 -90.30 REMARK 500 GLU B 117 -84.83 -120.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 19 O REMARK 620 2 ASP B 20 OD1 80.0 REMARK 620 3 ASP B 20 OD2 91.7 55.6 REMARK 620 4 HOH B 314 O 91.0 131.2 77.2 REMARK 620 5 DA D 515 OP2 73.1 73.0 128.3 149.2 REMARK 620 6 HOH D 704 O 95.3 147.3 157.0 80.8 74.7 REMARK 620 7 DG F 614 OP1 178.4 100.3 87.2 87.6 108.4 85.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD1 REMARK 620 2 ASP A 20 OD2 55.5 REMARK 620 3 HOH A 309 O 128.3 73.6 REMARK 620 4 GLY B 19 O 87.2 94.0 88.2 REMARK 620 5 DC D 514 OP1 96.9 82.1 83.3 171.3 REMARK 620 6 DA F 615 OP2 76.9 132.2 151.0 78.0 110.3 REMARK 620 7 HOH F 710 O 154.6 149.2 77.0 93.9 85.8 78.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 134 O REMARK 620 2 ASN A 136 O 88.1 REMARK 620 3 HOH A 310 O 87.2 65.0 REMARK 620 4 HOH A 313 O 100.3 74.7 138.8 REMARK 620 5 HOH A 332 O 157.8 90.2 72.1 100.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 134 O REMARK 620 2 ASN B 136 O 80.3 REMARK 620 3 HOH B 315 O 103.1 66.7 REMARK 620 4 HOH B 318 O 82.5 70.9 135.4 REMARK 620 5 HOH B 341 O 168.2 90.1 66.5 100.9 REMARK 620 6 HOH B 343 O 91.7 138.8 76.1 148.5 91.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGO D 601 DBREF 6FB5 A 2 154 PDB 6FB5 6FB5 2 154 DBREF 6FB5 B 2 155 PDB 6FB5 6FB5 2 155 DBREF 6FB5 D 501 524 PDB 6FB5 6FB5 501 524 DBREF 6FB5 F 601 624 PDB 6FB5 6FB5 601 624 SEQRES 1 A 153 ASN THR LYS TYR ASN LYS GLU PHE LEU LEU TYR LEU ALA SEQRES 2 A 153 GLY PHE VAL ASP SER ASP GLY SER ILE ILE ALA GLN ILE SEQRES 3 A 153 LYS PRO ASN GLN SER VAL LYS PHE LYS HIS ARG LEU GLN SEQRES 4 A 153 LEU THR PHE ASP VAL THR GLN LYS THR GLN ARG ARG TRP SEQRES 5 A 153 PHE LEU ASP LYS LEU VAL ASP GLU ILE GLY VAL GLY TYR SEQRES 6 A 153 VAL ALA ASP SER GLY SER VAL SER LYS TYR ARG LEU SER SEQRES 7 A 153 GLU ILE LYS PRO LEU HIS ASN PHE LEU THR GLN LEU GLN SEQRES 8 A 153 PRO PHE LEU LYS LEU LYS GLN LYS GLN ALA ASN LEU VAL SEQRES 9 A 153 LEU LYS ILE ILE GLU GLN LEU PRO SER ALA LYS GLU SER SEQRES 10 A 153 PRO ASP LYS PHE LEU GLU VAL CYS THR TRP VAL ASP GLN SEQRES 11 A 153 ILE ALA ALA LEU ASN ASP SER LYS THR ARG LYS THR THR SEQRES 12 A 153 SER GLU THR VAL ARG ALA VAL LEU ASP SER SEQRES 1 B 154 ASN THR LYS TYR ASN LYS GLU PHE LEU LEU TYR LEU ALA SEQRES 2 B 154 GLY PHE VAL ASP GLY ASP GLY SER ILE ILE ALA GLN ILE SEQRES 3 B 154 LYS PRO ASN GLN SER GLY LYS PHE LYS HIS LYS LEU SER SEQRES 4 B 154 LEU THR PHE LYS VAL THR GLN LYS THR GLN ARG ARG TRP SEQRES 5 B 154 PHE LEU ASP LYS LEU VAL ASP GLU ILE GLY VAL GLY TYR SEQRES 6 B 154 VAL TYR ASP SER GLY SER VAL SER ASN TYR TYR LEU SER SEQRES 7 B 154 GLU ILE LYS PRO LEU HIS ASN PHE LEU THR GLN LEU GLN SEQRES 8 B 154 PRO PHE LEU LYS LEU LYS GLN LYS GLN ALA ASN LEU VAL SEQRES 9 B 154 LEU LYS ILE ILE GLU GLN LEU PRO SER ALA LYS GLU SER SEQRES 10 B 154 PRO ASP LYS PHE LEU GLU VAL CYS THR TRP VAL ASP GLN SEQRES 11 B 154 VAL ALA ALA LEU ASN ASP SER LYS THR ARG LYS THR THR SEQRES 12 B 154 SER GLU THR VAL ARG ALA VAL LEU ASP SER LEU SEQRES 1 D 24 DT DC DA DG DA DC DT DT DG DT DC DC DA SEQRES 2 D 24 DC DA DG DG DA DG DT DC DA DG DA SEQRES 1 F 24 DT DC DT DG DA DC DT DC DC DT DG DT DG SEQRES 2 F 24 DG DA DC DA DA DG DT DC DT DG DA HET MG A 201 1 HET MG A 202 1 HET MG B 201 1 HET MG B 202 1 HET ACT B 203 4 HET PGO D 601 5 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM PGO S-1,2-PROPANEDIOL FORMUL 5 MG 4(MG 2+) FORMUL 9 ACT C2 H3 O2 1- FORMUL 10 PGO C3 H8 O2 FORMUL 11 HOH *121(H2 O) HELIX 1 AA1 ASN A 6 ASP A 20 1 15 HELIX 2 AA2 ARG A 51 GLY A 63 1 13 HELIX 3 AA3 GLU A 80 GLN A 92 1 13 HELIX 4 AA4 PRO A 93 LEU A 95 5 3 HELIX 5 AA5 LYS A 98 GLN A 111 1 14 HELIX 6 AA6 GLN A 111 LYS A 116 1 6 HELIX 7 AA7 SER A 118 ASN A 136 1 19 HELIX 8 AA8 THR A 144 ASP A 153 1 10 HELIX 9 AA9 ASN B 6 ASP B 20 1 15 HELIX 10 AB1 ARG B 51 GLY B 63 1 13 HELIX 11 AB2 GLU B 80 GLN B 92 1 13 HELIX 12 AB3 PRO B 93 LEU B 95 5 3 HELIX 13 AB4 LYS B 98 GLN B 111 1 14 HELIX 14 AB5 GLN B 111 LYS B 116 1 6 HELIX 15 AB6 SER B 118 ASN B 136 1 19 HELIX 16 AB7 THR B 144 ASP B 153 1 10 SHEET 1 AA1 4 GLY A 21 PRO A 29 0 SHEET 2 AA1 4 HIS A 37 LYS A 48 -1 O ARG A 38 N LYS A 28 SHEET 3 AA1 4 VAL A 73 LEU A 78 -1 O SER A 74 N GLN A 47 SHEET 4 AA1 4 TYR A 66 SER A 70 -1 N TYR A 66 O ARG A 77 SHEET 1 AA2 4 GLY B 21 PRO B 29 0 SHEET 2 AA2 4 HIS B 37 LYS B 48 -1 O THR B 42 N ILE B 24 SHEET 3 AA2 4 VAL B 73 LEU B 78 -1 O SER B 74 N GLN B 47 SHEET 4 AA2 4 TYR B 66 SER B 70 -1 N SER B 70 O VAL B 73 LINK O SER A 19 MG MG B 202 1555 1555 2.19 LINK OD1 ASP A 20 MG MG A 201 1555 1555 2.51 LINK OD2 ASP A 20 MG MG A 201 1555 1555 2.12 LINK O ALA A 134 MG MG A 202 1555 1555 2.42 LINK O ASN A 136 MG MG A 202 1555 1555 2.40 LINK MG MG A 201 O HOH A 309 1555 1555 2.04 LINK MG MG A 201 O GLY B 19 1555 1555 2.19 LINK MG MG A 201 OP1 DC D 514 1555 1555 2.31 LINK MG MG A 201 OP2 DA F 615 1555 1555 2.26 LINK MG MG A 201 O HOH F 710 1555 1555 1.99 LINK MG MG A 202 O HOH A 310 1555 1555 2.36 LINK MG MG A 202 O HOH A 313 1555 1555 2.37 LINK MG MG A 202 O HOH A 332 1555 1555 2.41 LINK OD1 ASP B 20 MG MG B 202 1555 1555 2.52 LINK OD2 ASP B 20 MG MG B 202 1555 1555 2.10 LINK O ALA B 134 MG MG B 201 1555 1555 2.27 LINK O ASN B 136 MG MG B 201 1555 1555 2.43 LINK MG MG B 201 O HOH B 315 1555 1555 2.40 LINK MG MG B 201 O HOH B 318 1555 1555 2.29 LINK MG MG B 201 O HOH B 341 1555 1555 2.36 LINK MG MG B 201 O HOH B 343 1555 1555 2.34 LINK MG MG B 202 O HOH B 314 1555 1555 2.01 LINK MG MG B 202 OP2 DA D 515 1555 1555 2.32 LINK MG MG B 202 O HOH D 704 1555 1555 2.05 LINK MG MG B 202 OP1 DG F 614 1555 1555 2.22 SITE 1 AC1 6 ASP A 20 HOH A 309 GLY B 19 DC D 514 SITE 2 AC1 6 DA F 615 HOH F 710 SITE 1 AC2 6 ALA A 134 ASN A 136 HOH A 310 HOH A 313 SITE 2 AC2 6 HOH A 332 HOH B 317 SITE 1 AC3 6 ALA B 134 ASN B 136 HOH B 315 HOH B 318 SITE 2 AC3 6 HOH B 341 HOH B 343 SITE 1 AC4 6 SER A 19 ASP B 20 HOH B 314 DA D 515 SITE 2 AC4 6 HOH D 704 DG F 614 SITE 1 AC5 4 LYS A 96 PHE B 54 LYS B 57 GLU B 61 SITE 1 AC6 7 LYS A 98 HOH A 308 ARG B 51 DA D 515 SITE 2 AC6 7 DG D 516 HOH D 704 HOH D 709 CRYST1 45.290 68.005 83.030 90.00 96.55 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022080 0.000000 0.002535 0.00000 SCALE2 0.000000 0.014705 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012123 0.00000