HEADER DNA BINDING PROTEIN 18-DEC-17 6FB6 TITLE CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN TITLE 2 (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA TITLE 3 (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF TITLE 4 MANGANESE COMPND MOL_ID: 1; COMPND 2 MOLECULE: I-CREI MONOMER A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: I-CREI MONOMER B; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'-D(*TP*CP*AP*GP*AP*CP*TP*TP*GP*TP*CP*CP*AP*C)-3'); COMPND 11 CHAIN: D; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*G)-3'); COMPND 15 CHAIN: F; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: DNA (5'-D(P*GP*GP*GP*AP*GP*TP*CP*AP*GP*A)-3'); COMPND 19 CHAIN: E; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 6; COMPND 22 MOLECULE: DNA (5'-D(P*AP*CP*AP*AP*GP*TP*CP*TP*GP*A)-3'); COMPND 23 CHAIN: G; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 8 ORGANISM_TAXID: 3055; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 5; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630; SOURCE 23 MOL_ID: 6; SOURCE 24 SYNTHETIC: YES; SOURCE 25 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 26 ORGANISM_TAXID: 32630 KEYWDS CHLAMYDOMONAS REINHARDTII, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.MOLINA,J.PRIETO REVDAT 2 17-JAN-24 6FB6 1 LINK REVDAT 1 18-JUL-18 6FB6 0 JRNL AUTH J.PRIETO,P.REDONDO,B.LOPEZ-MENDEZ,M.D'ABRAMO,N.MERINO, JRNL AUTH 2 F.J.BLANCO,P.DUCHATEAU,G.MONTOYA,R.MOLINA JRNL TITL UNDERSTANDING THE INDIRECT DNA READ-OUT SPECIFICITY OF JRNL TITL 2 I-CREI MEGANUCLEASE. JRNL REF SCI REP V. 8 10286 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29980759 JRNL DOI 10.1038/S41598-018-28599-0 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 28700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8964 - 7.1640 0.98 1271 143 0.1523 0.1886 REMARK 3 2 7.1640 - 5.6899 0.99 1272 141 0.1887 0.2503 REMARK 3 3 5.6899 - 4.9717 0.98 1268 141 0.1754 0.1717 REMARK 3 4 4.9717 - 4.5176 1.00 1285 144 0.1513 0.2173 REMARK 3 5 4.5176 - 4.1941 0.98 1276 144 0.1677 0.1939 REMARK 3 6 4.1941 - 3.9470 0.97 1278 145 0.1650 0.2417 REMARK 3 7 3.9470 - 3.7494 0.99 1238 139 0.1936 0.2186 REMARK 3 8 3.7494 - 3.5863 0.59 775 92 0.1876 0.2678 REMARK 3 9 3.5863 - 3.4482 0.98 1248 138 0.1859 0.2314 REMARK 3 10 3.4482 - 3.3293 0.94 1221 136 0.1850 0.2279 REMARK 3 11 3.3293 - 3.2252 0.98 1251 139 0.1846 0.2385 REMARK 3 12 3.2252 - 3.1331 0.94 1250 138 0.2163 0.3085 REMARK 3 13 3.1331 - 3.0506 0.98 1254 142 0.2422 0.2738 REMARK 3 14 3.0506 - 2.9762 0.97 1246 137 0.2349 0.3281 REMARK 3 15 2.9762 - 2.9085 0.95 1236 135 0.2434 0.3295 REMARK 3 16 2.9085 - 2.8467 0.98 1280 141 0.2474 0.2758 REMARK 3 17 2.8467 - 2.7897 0.96 1254 140 0.2673 0.3379 REMARK 3 18 2.7897 - 2.7371 0.94 1216 135 0.2734 0.3750 REMARK 3 19 2.7371 - 2.6882 0.97 1212 135 0.2712 0.3270 REMARK 3 20 2.6882 - 2.6426 0.97 1257 140 0.2772 0.2763 REMARK 3 21 2.6426 - 2.6000 0.94 1231 136 0.2921 0.3316 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3620 REMARK 3 ANGLE : 0.780 5094 REMARK 3 CHIRALITY : 0.046 583 REMARK 3 PLANARITY : 0.003 474 REMARK 3 DIHEDRAL : 21.109 1416 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 38.3742 12.4820 185.1541 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.1920 REMARK 3 T33: 0.1788 T12: -0.0042 REMARK 3 T13: 0.0256 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 2.4541 L22: 0.4852 REMARK 3 L33: 1.6186 L12: -0.2192 REMARK 3 L13: 0.5956 L23: -0.2831 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.0104 S13: 0.1433 REMARK 3 S21: 0.0350 S22: -0.1794 S23: 0.0432 REMARK 3 S31: 0.0197 S32: 0.1221 S33: 0.1533 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200008036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.6 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28700 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 44.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1G9Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CALCIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.6-5.4, 33-40% (V/V) 1,2-PROPANEDIOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.99350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, F, E, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG E 515 P DG E 515 OP3 -0.126 REMARK 500 DA G 615 P DA G 615 OP3 -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC D 502 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC D 506 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -66.21 -92.47 REMARK 500 GLU A 117 -91.07 -98.49 REMARK 500 LYS A 139 -17.91 -140.38 REMARK 500 SER B 70 74.53 -154.41 REMARK 500 GLU B 117 -107.62 -77.74 REMARK 500 LYS B 139 -36.99 -131.52 REMARK 500 THR B 144 -169.60 -125.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 19 O REMARK 620 2 ASP B 20 OD2 93.2 REMARK 620 3 DG F 614 OP1 177.4 88.5 REMARK 620 4 HOH F 701 O 97.6 87.7 80.5 REMARK 620 5 DG E 515 OP3 94.6 159.5 84.4 110.0 REMARK 620 6 DG E 515 OP2 85.7 104.3 95.8 167.4 57.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD2 REMARK 620 2 HOH A 303 O 72.8 REMARK 620 3 GLY B 19 O 84.5 88.2 REMARK 620 4 DC D 514 OP1 81.4 90.3 165.6 REMARK 620 5 DA G 615 OP1 111.3 168.6 81.7 100.8 REMARK 620 6 DA G 615 OP2 175.7 111.2 93.8 100.0 64.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD1 REMARK 620 2 ASP B 20 OD1 78.6 REMARK 620 3 DC D 514 O3' 84.4 149.3 REMARK 620 4 DG F 614 O3' 157.8 98.5 106.6 REMARK 620 5 DG E 515 OP2 112.8 95.1 68.2 89.4 REMARK 620 6 DA G 615 OP1 91.1 113.2 92.3 69.6 146.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 203 DBREF 6FB6 A 2 154 PDB 6FB6 6FB6 2 154 DBREF 6FB6 B 2 155 PDB 6FB6 6FB6 2 155 DBREF 6FB6 D 501 514 PDB 6FB6 6FB6 501 514 DBREF 6FB6 F 601 614 PDB 6FB6 6FB6 601 614 DBREF 6FB6 E 515 524 PDB 6FB6 6FB6 515 524 DBREF 6FB6 G 615 624 PDB 6FB6 6FB6 615 624 SEQRES 1 A 153 ASN THR LYS TYR ASN LYS GLU PHE LEU LEU TYR LEU ALA SEQRES 2 A 153 GLY PHE VAL ASP SER ASP GLY SER ILE ILE ALA GLN ILE SEQRES 3 A 153 LYS PRO ASN GLN SER VAL LYS PHE LYS HIS ARG LEU GLN SEQRES 4 A 153 LEU THR PHE ASP VAL THR GLN LYS THR GLN ARG ARG TRP SEQRES 5 A 153 PHE LEU ASP LYS LEU VAL ASP GLU ILE GLY VAL GLY TYR SEQRES 6 A 153 VAL ALA ASP SER GLY SER VAL SER LYS TYR ARG LEU SER SEQRES 7 A 153 GLU ILE LYS PRO LEU HIS ASN PHE LEU THR GLN LEU GLN SEQRES 8 A 153 PRO PHE LEU LYS LEU LYS GLN LYS GLN ALA ASN LEU VAL SEQRES 9 A 153 LEU LYS ILE ILE GLU GLN LEU PRO SER ALA LYS GLU SER SEQRES 10 A 153 PRO ASP LYS PHE LEU GLU VAL CYS THR TRP VAL ASP GLN SEQRES 11 A 153 ILE ALA ALA LEU ASN ASP SER LYS THR ARG LYS THR THR SEQRES 12 A 153 SER GLU THR VAL ARG ALA VAL LEU ASP SER SEQRES 1 B 154 ASN THR LYS TYR ASN LYS GLU PHE LEU LEU TYR LEU ALA SEQRES 2 B 154 GLY PHE VAL ASP GLY ASP GLY SER ILE ILE ALA GLN ILE SEQRES 3 B 154 LYS PRO ASN GLN SER GLY LYS PHE LYS HIS LYS LEU SER SEQRES 4 B 154 LEU THR PHE LYS VAL THR GLN LYS THR GLN ARG ARG TRP SEQRES 5 B 154 PHE LEU ASP LYS LEU VAL ASP GLU ILE GLY VAL GLY TYR SEQRES 6 B 154 VAL TYR ASP SER GLY SER VAL SER ASN TYR TYR LEU SER SEQRES 7 B 154 GLU ILE LYS PRO LEU HIS ASN PHE LEU THR GLN LEU GLN SEQRES 8 B 154 PRO PHE LEU LYS LEU LYS GLN LYS GLN ALA ASN LEU VAL SEQRES 9 B 154 LEU LYS ILE ILE GLU GLN LEU PRO SER ALA LYS GLU SER SEQRES 10 B 154 PRO ASP LYS PHE LEU GLU VAL CYS THR TRP VAL ASP GLN SEQRES 11 B 154 VAL ALA ALA LEU ASN ASP SER LYS THR ARG LYS THR THR SEQRES 12 B 154 SER GLU THR VAL ARG ALA VAL LEU ASP SER LEU SEQRES 1 D 14 DT DC DA DG DA DC DT DT DG DT DC DC DA SEQRES 2 D 14 DC SEQRES 1 F 14 DT DC DT DG DA DC DT DC DC DT DG DT DG SEQRES 2 F 14 DG SEQRES 1 E 10 DG DG DG DA DG DT DC DA DG DA SEQRES 1 G 10 DA DC DA DA DG DT DC DT DG DA HET MN A 201 1 HET MN A 202 1 HET MN A 203 1 HETNAM MN MANGANESE (II) ION FORMUL 7 MN 3(MN 2+) FORMUL 10 HOH *11(H2 O) HELIX 1 AA1 ASN A 6 ASP A 20 1 15 HELIX 2 AA2 ARG A 51 GLY A 63 1 13 HELIX 3 AA3 GLU A 80 GLN A 92 1 13 HELIX 4 AA4 PRO A 93 LEU A 95 5 3 HELIX 5 AA5 LYS A 98 GLN A 111 1 14 HELIX 6 AA6 SER A 118 ASN A 136 1 19 HELIX 7 AA7 THR A 144 ASP A 153 1 10 HELIX 8 AA8 ASN B 6 ASP B 20 1 15 HELIX 9 AA9 ARG B 51 GLY B 63 1 13 HELIX 10 AB1 GLU B 80 GLN B 92 1 13 HELIX 11 AB2 PRO B 93 LEU B 95 5 3 HELIX 12 AB3 LYS B 98 LEU B 112 1 15 HELIX 13 AB4 PRO B 113 GLU B 117 5 5 HELIX 14 AB5 SER B 118 ASN B 136 1 19 HELIX 15 AB6 THR B 144 LEU B 155 1 12 SHEET 1 AA1 4 GLY A 21 PRO A 29 0 SHEET 2 AA1 4 HIS A 37 LYS A 48 -1 O ARG A 38 N LYS A 28 SHEET 3 AA1 4 VAL A 73 LEU A 78 -1 O SER A 74 N GLN A 47 SHEET 4 AA1 4 TYR A 66 SER A 70 -1 N ALA A 68 O LYS A 75 SHEET 1 AA2 4 GLY B 21 PRO B 29 0 SHEET 2 AA2 4 HIS B 37 LYS B 48 -1 O LYS B 38 N LYS B 28 SHEET 3 AA2 4 VAL B 73 LEU B 78 -1 O SER B 74 N GLN B 47 SHEET 4 AA2 4 TYR B 66 ASP B 69 -1 N TYR B 66 O TYR B 77 LINK O SER A 19 MN MN A 203 1555 1555 2.25 LINK OD2 ASP A 20 MN MN A 201 1555 1555 2.36 LINK OD1 ASP A 20 MN MN A 202 1555 1555 2.11 LINK MN MN A 201 O HOH A 303 1555 1555 2.07 LINK MN MN A 201 O GLY B 19 1555 1555 2.45 LINK MN MN A 201 OP1 DC D 514 1555 1555 2.13 LINK MN MN A 201 OP1 DA G 615 1555 1555 2.27 LINK MN MN A 201 OP2 DA G 615 1555 1555 2.47 LINK MN MN A 202 OD1 ASP B 20 1555 1555 2.28 LINK MN MN A 202 O3' DC D 514 1555 1555 2.80 LINK MN MN A 202 O3' DG F 614 1555 1555 2.58 LINK MN MN A 202 OP2 DG E 515 1555 1555 2.26 LINK MN MN A 202 OP1 DA G 615 1555 1555 2.22 LINK MN MN A 203 OD2 ASP B 20 1555 1555 1.97 LINK MN MN A 203 OP1 DG F 614 1555 1555 2.01 LINK MN MN A 203 O HOH F 701 1555 1555 2.11 LINK MN MN A 203 OP3 DG E 515 1555 1555 2.31 LINK MN MN A 203 OP2 DG E 515 1555 1555 2.60 SITE 1 AC1 5 ASP A 20 HOH A 303 GLY B 19 DC D 514 SITE 2 AC1 5 DA G 615 SITE 1 AC2 7 ASP A 20 GLY B 19 ASP B 20 DC D 514 SITE 2 AC2 7 DG E 515 DG F 614 DA G 615 SITE 1 AC3 5 SER A 19 ASP B 20 DG E 515 DG F 614 SITE 2 AC3 5 HOH F 701 CRYST1 45.176 67.987 83.044 90.00 96.45 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022136 0.000000 0.002504 0.00000 SCALE2 0.000000 0.014709 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012119 0.00000