HEADER STRUCTURAL PROTEIN 20-DEC-17 6FBY TITLE CRYSTAL STRUCTURE OF C-TERMINAL MODIFIED TAU PEPTIDE-HYBRID 4.2B WITH TITLE 2 14-3-3SIGMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN SIGMA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: EPITHELIAL CELL MARKER PROTEIN 1,STRATIFIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ACE-ARG-THR-PRO-SEP-LEU-PRO-GLY; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: THR-PRO-SEP-LEU-PRO-GLY; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFN, HME1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TAU 14-3-3 ALZHEIMER, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ANDREI,F.A.MEIJER,C.OTTMANN,L.G.MILROY REVDAT 3 27-FEB-19 6FBY 1 REMARK ATOM REVDAT 2 28-NOV-18 6FBY 1 JRNL REVDAT 1 16-MAY-18 6FBY 0 JRNL AUTH S.A.ANDREI,F.A.MEIJER,J.F.NEVES,L.BRUNSVELD,I.LANDRIEU, JRNL AUTH 2 C.OTTMANN,L.G.MILROY JRNL TITL INHIBITION OF 14-3-3/TAU BY HYBRID SMALL-MOLECULE PEPTIDES JRNL TITL 2 OPERATING VIA TWO DIFFERENT BINDING MODES. JRNL REF ACS CHEM NEUROSCI V. 9 2639 2018 JRNL REFN ESSN 1948-7193 JRNL PMID 29722962 JRNL DOI 10.1021/ACSCHEMNEURO.8B00118 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 91195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 4551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8193 - 4.6594 1.00 3124 163 0.1990 0.2015 REMARK 3 2 4.6594 - 3.6988 1.00 2988 153 0.1359 0.1699 REMARK 3 3 3.6988 - 3.2313 1.00 2982 134 0.1446 0.1668 REMARK 3 4 3.2313 - 2.9359 1.00 2918 147 0.1430 0.2024 REMARK 3 5 2.9359 - 2.7255 1.00 2924 162 0.1347 0.1744 REMARK 3 6 2.7255 - 2.5649 1.00 2896 157 0.1256 0.1634 REMARK 3 7 2.5649 - 2.4364 1.00 2907 149 0.1178 0.1406 REMARK 3 8 2.4364 - 2.3304 1.00 2867 172 0.1121 0.1598 REMARK 3 9 2.3304 - 2.2406 1.00 2896 147 0.1123 0.1540 REMARK 3 10 2.2406 - 2.1633 1.00 2880 155 0.1147 0.1749 REMARK 3 11 2.1633 - 2.0957 1.00 2867 163 0.1176 0.1496 REMARK 3 12 2.0957 - 2.0358 1.00 2880 170 0.1208 0.1733 REMARK 3 13 2.0358 - 1.9822 1.00 2900 140 0.1227 0.1740 REMARK 3 14 1.9822 - 1.9338 1.00 2868 164 0.1236 0.1574 REMARK 3 15 1.9338 - 1.8899 1.00 2837 161 0.1271 0.1818 REMARK 3 16 1.8899 - 1.8496 1.00 2871 120 0.1324 0.1731 REMARK 3 17 1.8496 - 1.8126 1.00 2916 145 0.1243 0.1799 REMARK 3 18 1.8126 - 1.7784 1.00 2848 154 0.1278 0.1679 REMARK 3 19 1.7784 - 1.7467 1.00 2839 157 0.1296 0.1725 REMARK 3 20 1.7467 - 1.7171 1.00 2871 158 0.1350 0.2222 REMARK 3 21 1.7171 - 1.6894 1.00 2839 159 0.1439 0.1789 REMARK 3 22 1.6894 - 1.6634 1.00 2874 167 0.1430 0.2181 REMARK 3 23 1.6634 - 1.6389 1.00 2845 139 0.1503 0.2020 REMARK 3 24 1.6389 - 1.6158 1.00 2871 134 0.1518 0.2176 REMARK 3 25 1.6158 - 1.5940 1.00 2888 142 0.1608 0.2287 REMARK 3 26 1.5940 - 1.5733 1.00 2840 143 0.1656 0.2196 REMARK 3 27 1.5733 - 1.5536 1.00 2862 158 0.1748 0.2460 REMARK 3 28 1.5536 - 1.5349 1.00 2844 146 0.1988 0.2549 REMARK 3 29 1.5349 - 1.5170 1.00 2858 151 0.2068 0.2675 REMARK 3 30 1.5170 - 1.5000 1.00 2844 141 0.2053 0.2525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4252 REMARK 3 ANGLE : 0.850 5803 REMARK 3 CHIRALITY : 0.044 635 REMARK 3 PLANARITY : 0.005 768 REMARK 3 DIHEDRAL : 16.087 2707 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200008064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91278 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 1.18900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.18 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG400, 10 MM HEPES PH 7.1, 5% REMARK 280 GLYCEROL, 0.19 M CACL 2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.37950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.37950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.11500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -31.37950 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 35.11500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 70 REMARK 465 GLU A 71 REMARK 465 GLU A 72 REMARK 465 GLY A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 LYS A 77 REMARK 465 ASN C 70 REMARK 465 GLU C 71 REMARK 465 GLU C 72 REMARK 465 GLY C 73 REMARK 465 SER C 74 REMARK 465 GLU C 75 REMARK 465 GLU C 76 REMARK 465 LYS C 77 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 60 O HOH A 414 1.51 REMARK 500 O HOH A 557 O HOH A 604 1.91 REMARK 500 O HOH A 645 O HOH A 667 1.92 REMARK 500 O HOH C 698 O HOH C 706 1.92 REMARK 500 O HOH A 450 O HOH A 656 1.94 REMARK 500 O HOH C 688 O HOH C 691 1.94 REMARK 500 O HOH C 406 O HOH C 610 1.96 REMARK 500 O HOH A 410 O HOH A 424 1.98 REMARK 500 OE1 GLU A 35 O HOH A 401 1.99 REMARK 500 O HOH C 405 O HOH C 616 1.99 REMARK 500 O HOH A 618 O HOH A 671 2.01 REMARK 500 O HOH C 567 O HOH C 644 2.03 REMARK 500 O HOH A 433 O HOH A 462 2.03 REMARK 500 OE1 GLU C 153 O HOH C 401 2.04 REMARK 500 O HOH C 645 O HOH C 691 2.05 REMARK 500 OE2 GLU C 115 O HOH C 402 2.05 REMARK 500 O HOH A 637 O HOH A 644 2.05 REMARK 500 O HOH A 464 O HOH B 206 2.06 REMARK 500 OE1 GLU C 34 O HOH C 403 2.06 REMARK 500 O HOH C 458 O HOH C 595 2.07 REMARK 500 O HOH A 410 O HOH A 640 2.07 REMARK 500 O HOH A 594 O HOH A 676 2.08 REMARK 500 O HOH A 424 O HOH A 437 2.08 REMARK 500 O HOH A 631 O HOH A 715 2.09 REMARK 500 O HOH A 693 O HOH A 713 2.09 REMARK 500 O HOH D 209 O HOH D 211 2.10 REMARK 500 O HOH C 453 O HOH C 634 2.10 REMARK 500 O ACE B 1 O HOH B 201 2.11 REMARK 500 O HOH B 206 O HOH B 212 2.11 REMARK 500 OD2 ASP A 97 O HOH A 402 2.12 REMARK 500 O HOH C 607 O HOH C 627 2.14 REMARK 500 O HOH A 463 O HOH A 739 2.16 REMARK 500 OE2 GLU A 35 O HOH A 403 2.16 REMARK 500 O HOH C 417 O HOH C 453 2.17 REMARK 500 NE2 GLN C 152 O HOH C 404 2.17 REMARK 500 O HOH A 698 O HOH A 714 2.17 REMARK 500 O HOH A 484 O HOH A 693 2.18 REMARK 500 O HOH A 613 O HOH A 673 2.18 REMARK 500 O HOH C 645 O HOH C 675 2.19 REMARK 500 OD2 ASP A 104 O HOH A 404 2.19 REMARK 500 O HOH A 461 O HOH A 474 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 630 O HOH A 726 4545 1.77 REMARK 500 O HOH A 538 O HOH C 588 4455 1.85 REMARK 500 O HOH A 739 O HOH C 464 2554 1.93 REMARK 500 O HOH A 407 O HOH A 461 4545 1.98 REMARK 500 O HOH A 519 O HOH C 430 2554 1.99 REMARK 500 O HOH A 761 O HOH C 719 4455 2.07 REMARK 500 OH TYR A 213 OE2 GLU C 110 4445 2.11 REMARK 500 O HOH C 686 O HOH C 703 3655 2.13 REMARK 500 O HOH A 484 O HOH C 417 1455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 18 77.00 -104.63 REMARK 500 ALA A 111 53.69 -101.22 REMARK 500 PRO B 7 41.50 -85.27 REMARK 500 ARG C 18 76.02 -105.92 REMARK 500 HIS C 106 37.32 -146.98 REMARK 500 PRO D 7 47.51 -84.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 728 DISTANCE = 5.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A -1 O REMARK 620 2 HOH A 618 O 81.3 REMARK 620 3 GLU C 2 OE1 93.4 61.5 REMARK 620 4 HOH C 677 O 161.4 85.4 68.6 REMARK 620 5 HOH C 485 O 107.0 142.9 149.2 91.4 REMARK 620 6 HOH A 520 O 84.2 137.8 80.2 97.2 79.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 161 O REMARK 620 2 HOH A 605 O 84.9 REMARK 620 3 HOH A 512 O 71.6 148.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 228 O REMARK 620 2 THR A 231 OXT 78.6 REMARK 620 3 HOH A 521 O 151.1 72.8 REMARK 620 4 HOH A 648 O 81.3 159.9 127.2 REMARK 620 5 HOH A 743 O 136.0 135.7 67.9 61.9 REMARK 620 6 HOH A 506 O 75.4 85.1 97.9 89.7 80.8 REMARK 620 7 HOH C 636 O 100.8 101.3 88.8 82.6 97.7 171.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 80 OE1 REMARK 620 2 GLU C 80 OE2 44.3 REMARK 620 3 HOH C 439 O 68.9 48.4 REMARK 620 4 HOH C 664 O 132.2 142.8 94.3 REMARK 620 5 HOH C 588 O 104.7 61.3 52.9 98.0 REMARK 620 6 HOH C 428 O 74.2 118.3 113.0 72.4 163.2 REMARK 620 7 GLN A 8 OE1 49.6 76.2 56.5 83.4 109.2 56.8 REMARK 620 8 HOH A 665 O 139.7 152.9 150.1 60.7 110.9 77.0 128.7 REMARK 620 9 HOH A 538 O 104.9 66.2 87.4 119.1 40.2 156.6 140.0 91.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4H B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO D 4 and SEP D 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide SEP D 5 and LEU D 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide D4H D 101 and GLY D REMARK 800 8 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FAU RELATED DB: PDB REMARK 900 SIMILAR COMPOUND IN SAME STUDY REMARK 900 RELATED ID: 6FAV RELATED DB: PDB REMARK 900 SIMILAR COMPOUND IN SAME STUDY REMARK 900 RELATED ID: 6FAW RELATED DB: PDB REMARK 900 SIMILAR COMPOUND IN SAME STUDY REMARK 900 RELATED ID: 6FBW RELATED DB: PDB REMARK 900 SIMILAR COMPOUND IN SAME STUDY DBREF 6FBY A 1 231 UNP P31947 1433S_HUMAN 1 231 DBREF 6FBY B 1 8 PDB 6FBY 6FBY 1 8 DBREF 6FBY C 1 231 UNP P31947 1433S_HUMAN 1 231 DBREF 6FBY D 3 8 PDB 6FBY 6FBY 3 8 SEQADV 6FBY GLY A -4 UNP P31947 EXPRESSION TAG SEQADV 6FBY ALA A -3 UNP P31947 EXPRESSION TAG SEQADV 6FBY MET A -2 UNP P31947 EXPRESSION TAG SEQADV 6FBY GLY A -1 UNP P31947 EXPRESSION TAG SEQADV 6FBY SER A 0 UNP P31947 EXPRESSION TAG SEQADV 6FBY GLY C -4 UNP P31947 EXPRESSION TAG SEQADV 6FBY ALA C -3 UNP P31947 EXPRESSION TAG SEQADV 6FBY MET C -2 UNP P31947 EXPRESSION TAG SEQADV 6FBY GLY C -1 UNP P31947 EXPRESSION TAG SEQADV 6FBY SER C 0 UNP P31947 EXPRESSION TAG SEQRES 1 A 236 GLY ALA MET GLY SER MET GLU ARG ALA SER LEU ILE GLN SEQRES 2 A 236 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP SEQRES 3 A 236 MET ALA ALA PHE MET LYS GLY ALA VAL GLU LYS GLY GLU SEQRES 4 A 236 GLU LEU SER CYS GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 A 236 TYR LYS ASN VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG SEQRES 6 A 236 VAL LEU SER SER ILE GLU GLN LYS SER ASN GLU GLU GLY SEQRES 7 A 236 SER GLU GLU LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU SEQRES 8 A 236 LYS VAL GLU THR GLU LEU GLN GLY VAL CYS ASP THR VAL SEQRES 9 A 236 LEU GLY LEU LEU ASP SER HIS LEU ILE LYS GLU ALA GLY SEQRES 10 A 236 ASP ALA GLU SER ARG VAL PHE TYR LEU LYS MET LYS GLY SEQRES 11 A 236 ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA THR GLY ASP SEQRES 12 A 236 ASP LYS LYS ARG ILE ILE ASP SER ALA ARG SER ALA TYR SEQRES 13 A 236 GLN GLU ALA MET ASP ILE SER LYS LYS GLU MET PRO PRO SEQRES 14 A 236 THR ASN PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER SEQRES 15 A 236 VAL PHE HIS TYR GLU ILE ALA ASN SER PRO GLU GLU ALA SEQRES 16 A 236 ILE SER LEU ALA LYS THR THR PHE ASP GLU ALA MET ALA SEQRES 17 A 236 ASP LEU HIS THR LEU SER GLU ASP SER TYR LYS ASP SER SEQRES 18 A 236 THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU SEQRES 19 A 236 TRP THR SEQRES 1 B 8 ACE ARG THR PRO SEP LEU PRO GLY SEQRES 1 C 236 GLY ALA MET GLY SER MET GLU ARG ALA SER LEU ILE GLN SEQRES 2 C 236 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP SEQRES 3 C 236 MET ALA ALA PHE MET LYS GLY ALA VAL GLU LYS GLY GLU SEQRES 4 C 236 GLU LEU SER CYS GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 C 236 TYR LYS ASN VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG SEQRES 6 C 236 VAL LEU SER SER ILE GLU GLN LYS SER ASN GLU GLU GLY SEQRES 7 C 236 SER GLU GLU LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU SEQRES 8 C 236 LYS VAL GLU THR GLU LEU GLN GLY VAL CYS ASP THR VAL SEQRES 9 C 236 LEU GLY LEU LEU ASP SER HIS LEU ILE LYS GLU ALA GLY SEQRES 10 C 236 ASP ALA GLU SER ARG VAL PHE TYR LEU LYS MET LYS GLY SEQRES 11 C 236 ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA THR GLY ASP SEQRES 12 C 236 ASP LYS LYS ARG ILE ILE ASP SER ALA ARG SER ALA TYR SEQRES 13 C 236 GLN GLU ALA MET ASP ILE SER LYS LYS GLU MET PRO PRO SEQRES 14 C 236 THR ASN PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER SEQRES 15 C 236 VAL PHE HIS TYR GLU ILE ALA ASN SER PRO GLU GLU ALA SEQRES 16 C 236 ILE SER LEU ALA LYS THR THR PHE ASP GLU ALA MET ALA SEQRES 17 C 236 ASP LEU HIS THR LEU SER GLU ASP SER TYR LYS ASP SER SEQRES 18 C 236 THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU SEQRES 19 C 236 TRP THR SEQRES 1 D 6 THR PRO SEP LEU PRO GLY HET ACE B 1 3 HET SEP B 5 16 HET SEP D 5 13 HET CL A 301 1 HET CL A 302 1 HET NA A 303 1 HET NA A 304 1 HET NA A 305 1 HET D4H B 101 19 HET NA C 301 1 HET D4H D 101 19 HETNAM ACE ACETYL GROUP HETNAM SEP PHOSPHOSERINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM D4H (2~{R})-2-[(~{S})-(3-METHYLPHENYL)-PHENYL- HETNAM 2 D4H METHYL]PYRROLIDINE HETSYN SEP PHOSPHONOSERINE FORMUL 2 ACE C2 H4 O FORMUL 2 SEP 2(C3 H8 N O6 P) FORMUL 5 CL 2(CL 1-) FORMUL 7 NA 4(NA 1+) FORMUL 10 D4H 2(C18 H21 N) FORMUL 13 HOH *718(H2 O) HELIX 1 AA1 GLU A 2 ALA A 16 1 15 HELIX 2 AA2 ARG A 18 GLU A 31 1 14 HELIX 3 AA3 SER A 37 SER A 69 1 33 HELIX 4 AA4 PRO A 79 HIS A 106 1 28 HELIX 5 AA5 ASP A 113 ALA A 135 1 23 HELIX 6 AA6 THR A 136 MET A 162 1 27 HELIX 7 AA7 ASN A 166 ILE A 183 1 18 HELIX 8 AA8 SER A 186 LEU A 205 1 20 HELIX 9 AA9 HIS A 206 LEU A 208 5 3 HELIX 10 AB1 SER A 209 THR A 231 1 23 HELIX 11 AB2 GLU C 2 ALA C 16 1 15 HELIX 12 AB3 ARG C 18 GLU C 31 1 14 HELIX 13 AB4 SER C 37 SER C 69 1 33 HELIX 14 AB5 PRO C 79 SER C 105 1 27 HELIX 15 AB6 HIS C 106 ALA C 111 1 6 HELIX 16 AB7 ASP C 113 ALA C 135 1 23 HELIX 17 AB8 THR C 136 MET C 162 1 27 HELIX 18 AB9 ASN C 166 ILE C 183 1 18 HELIX 19 AC1 SER C 186 ALA C 203 1 18 HELIX 20 AC2 ASP C 204 LEU C 208 5 5 HELIX 21 AC3 SER C 209 THR C 231 1 23 LINK O GLY A -1 NA NA A 305 1555 1555 2.39 LINK O GLU A 161 NA NA A 303 1555 1555 2.37 LINK O THR A 228 NA NA A 304 1555 1555 2.33 LINK OXT THR A 231 NA NA A 304 1555 1555 2.36 LINK C ACE B 1 N ARG B 2 1555 1555 1.33 LINK C PRO B 4 N SEP B 5 1555 1555 1.32 LINK C SEP B 5 N LEU B 6 1555 1555 1.32 LINK C GLY B 8 N13 D4H B 101 1555 1555 1.43 LINK OE1 GLU C 80 NA NA C 301 1555 1555 2.61 LINK OE2 GLU C 80 NA NA C 301 1555 1555 3.11 LINK C PRO D 4 N SEP D 5 1555 1555 1.32 LINK C SEP D 5 N LEU D 6 1555 1555 1.33 LINK C GLY D 8 N13 D4H D 101 1555 1555 1.43 LINK NA NA A 303 O HOH A 605 1555 1555 2.33 LINK NA NA A 303 O HOH A 512 1555 1555 2.31 LINK NA NA A 304 O HOH A 521 1555 1555 2.28 LINK NA NA A 304 O HOH A 648 1555 1555 2.46 LINK NA NA A 304 O HOH A 743 1555 1555 2.37 LINK NA NA A 304 O HOH A 506 1555 1555 2.12 LINK NA NA A 305 O HOH A 618 1555 1555 2.42 LINK NA NA C 301 O HOH C 439 1555 1555 3.16 LINK NA NA C 301 O HOH C 664 1555 1555 2.53 LINK NA NA C 301 O HOH C 588 1555 1555 2.75 LINK NA NA C 301 O HOH C 428 1555 1555 2.28 LINK OE1 GLN A 8 NA NA C 301 1555 4455 2.63 LINK OE1BGLU C 2 NA NA A 305 1555 1655 2.40 LINK NA NA A 304 O HOH C 636 1555 2554 2.40 LINK NA NA A 305 O HOH C 677 1555 1455 2.38 LINK NA NA A 305 O HOH C 485 1555 1455 2.59 LINK NA NA A 305 O HOH A 520 1555 4455 2.52 LINK NA NA C 301 O HOH A 665 1555 4555 2.57 LINK NA NA C 301 O HOH A 538 1555 4555 2.62 CISPEP 1 SER C 105 HIS C 106 0 8.12 SITE 1 AC1 3 LYS A 9 HOH C 625 HOH C 689 SITE 1 AC2 2 HOH A 723 LYS C 9 SITE 1 AC3 3 GLU A 161 HOH A 512 HOH A 605 SITE 1 AC4 7 THR A 228 THR A 231 HOH A 506 HOH A 521 SITE 2 AC4 7 HOH A 648 HOH A 743 HOH C 636 SITE 1 AC5 6 GLY A -1 HOH A 520 HOH A 618 GLU C 2 SITE 2 AC5 6 HOH C 485 HOH C 677 SITE 1 AC6 8 ASN A 42 SER A 45 VAL A 46 PHE A 119 SITE 2 AC6 8 LEU B 6 GLY B 8 MET C 202 HIS C 206 SITE 1 AC7 7 GLN A 8 HOH A 538 HOH A 665 GLU C 80 SITE 2 AC7 7 HOH C 428 HOH C 588 HOH C 664 SITE 1 AC8 15 LYS C 49 ARG C 56 ARG C 129 TYR C 130 SITE 2 AC8 15 ASN C 175 VAL C 178 ASN C 226 THR D 3 SITE 3 AC8 15 LEU D 6 PRO D 7 HOH D 202 HOH D 203 SITE 4 AC8 15 HOH D 204 HOH D 205 HOH D 207 SITE 1 AC9 16 LYS C 49 ARG C 56 ARG C 129 TYR C 130 SITE 2 AC9 16 LEU C 174 ASN C 175 THR D 3 PRO D 4 SITE 3 AC9 16 PRO D 7 GLY D 8 D4H D 101 HOH D 202 SITE 4 AC9 16 HOH D 203 HOH D 204 HOH D 205 HOH D 207 SITE 1 AD1 8 ASN C 42 SER C 45 VAL C 46 PHE C 119 SITE 2 AD1 8 HOH C 536 LEU D 6 PRO D 7 HOH D 201 CRYST1 62.759 70.230 127.990 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015934 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007813 0.00000