data_6FD1 # _entry.id 6FD1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6FD1 pdb_00006fd1 10.2210/pdb6fd1/pdb WWPDB D_1000179818 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 6FD1 _pdbx_database_status.recvd_initial_deposition_date 1997-09-17 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stout, C.D.' 1 'Stura, E.A.' 2 'Mcree, D.E.' 3 # _citation.id primary _citation.title 'Structure of Azotobacter vinelandii 7Fe ferredoxin at 1.35 A resolution and determination of the [Fe-S] bonds with 0.01 A accuracy.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 278 _citation.page_first 629 _citation.page_last 639 _citation.year 1998 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9600844 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.1732 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stout, C.D.' 1 ? primary 'Stura, E.A.' 2 ? primary 'McRee, D.E.' 3 ? # _cell.entry_id 6FD1 _cell.length_a 54.840 _cell.length_b 54.840 _cell.length_c 92.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FD1 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat '7-FE FERREDOXIN I (FD1)' 12059.530 1 ? ? ? ? 2 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 3 non-polymer syn 'FE3-S4 CLUSTER' 295.795 1 ? ? ? ? 4 water nat water 18.015 162 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FD1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN ITEKKDPLPDAEDWDGVKGKLQHLER ; _entity_poly.pdbx_seq_one_letter_code_can ;AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN ITEKKDPLPDAEDWDGVKGKLQHLER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PHE n 1 3 VAL n 1 4 VAL n 1 5 THR n 1 6 ASP n 1 7 ASN n 1 8 CYS n 1 9 ILE n 1 10 LYS n 1 11 CYS n 1 12 LYS n 1 13 TYR n 1 14 THR n 1 15 ASP n 1 16 CYS n 1 17 VAL n 1 18 GLU n 1 19 VAL n 1 20 CYS n 1 21 PRO n 1 22 VAL n 1 23 ASP n 1 24 CYS n 1 25 PHE n 1 26 TYR n 1 27 GLU n 1 28 GLY n 1 29 PRO n 1 30 ASN n 1 31 PHE n 1 32 LEU n 1 33 VAL n 1 34 ILE n 1 35 HIS n 1 36 PRO n 1 37 ASP n 1 38 GLU n 1 39 CYS n 1 40 ILE n 1 41 ASP n 1 42 CYS n 1 43 ALA n 1 44 LEU n 1 45 CYS n 1 46 GLU n 1 47 PRO n 1 48 GLU n 1 49 CYS n 1 50 PRO n 1 51 ALA n 1 52 GLN n 1 53 ALA n 1 54 ILE n 1 55 PHE n 1 56 SER n 1 57 GLU n 1 58 ASP n 1 59 GLU n 1 60 VAL n 1 61 PRO n 1 62 GLU n 1 63 ASP n 1 64 MET n 1 65 GLN n 1 66 GLU n 1 67 PHE n 1 68 ILE n 1 69 GLN n 1 70 LEU n 1 71 ASN n 1 72 ALA n 1 73 GLU n 1 74 LEU n 1 75 ALA n 1 76 GLU n 1 77 VAL n 1 78 TRP n 1 79 PRO n 1 80 ASN n 1 81 ILE n 1 82 THR n 1 83 GLU n 1 84 LYS n 1 85 LYS n 1 86 ASP n 1 87 PRO n 1 88 LEU n 1 89 PRO n 1 90 ASP n 1 91 ALA n 1 92 GLU n 1 93 ASP n 1 94 TRP n 1 95 ASP n 1 96 GLY n 1 97 VAL n 1 98 LYS n 1 99 GLY n 1 100 LYS n 1 101 LEU n 1 102 GLN n 1 103 HIS n 1 104 LEU n 1 105 GLU n 1 106 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Azotobacter vinelandii' _entity_src_nat.pdbx_ncbi_taxonomy_id 354 _entity_src_nat.genus Azotobacter _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FER1_AZOVI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00214 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN ITEKKDPLPDAEDWDGVKGKLQHLER ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6FD1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00214 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F3S non-polymer . 'FE3-S4 CLUSTER' ? 'Fe3 S4' 295.795 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 6FD1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_percent_sol 57.38 _exptl_crystal.description ;ALL DATA INCLUDING NEGATIVE I'S WERE USED WERE PROCESSED IN POINT GROUP 422 - PRESERVE BIJVOET PAIRS ; # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN CRYSTALLIZED FROM 4.8M AMMONIUM SULFATE, 0.45M TRIS-HCL, PH 7.8' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1997-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength 1.08 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 6FD1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.0 _reflns.d_resolution_high 1.35 _reflns.number_obs 57315 _reflns.number_all ? _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 21.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.3 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.38 _reflns_shell.percent_possible_all 72. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.747 _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 6FD1 _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 30880 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 100. _refine.ls_d_res_high 1.35 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs 0.153 _refine.ls_R_factor_all 0.15 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.213 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5. _refine.ls_number_reflns_R_free 1544 _refine.ls_number_parameters 9211 _refine.ls_number_restraints 10844 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method R-FREE _refine.details 'FREE R USED UNTIL LAST CYCLE WHEN ALL DATA WAS INCLUDED.' _refine.pdbx_starting_model 'PDB ENTRY 5FD1' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case 'FE CLUSTERS NOT RESTRAINED' _refine.pdbx_R_Free_selection_details 'EVERY 20TH REFLECTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 6FD1 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 1 _refine_analyze.occupancy_sum_hydrogen 776.0 _refine_analyze.occupancy_sum_non_hydrogen 1011.5 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 846 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 162 _refine_hist.number_atoms_total 1023 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 100. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.200 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.200 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.200 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.300 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.200 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 6FD1 _pdbx_refine.R_factor_all_no_cutoff 0.15 _pdbx_refine.R_factor_obs_no_cutoff 0.153 _pdbx_refine.free_R_factor_no_cutoff 0.213 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5. _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1544 _pdbx_refine.R_factor_all_4sig_cutoff 0.138 _pdbx_refine.R_factor_obs_4sig_cutoff 0.139 _pdbx_refine.free_R_factor_4sig_cutoff 0.201 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5. _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1218 _pdbx_refine.number_reflns_obs_4sig_cutoff 24118 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 6FD1 _struct.title '7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII LOW TEMPERATURE, 1.35 A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 6FD1 _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, IRON-SULFUR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 6 ? CYS A 8 ? ASP A 6 CYS A 8 5 ? 3 HELX_P HELX_P2 2 ASP A 15 ? VAL A 19 ? ASP A 15 VAL A 19 5 ? 5 HELX_P HELX_P3 3 GLU A 46 ? GLU A 48 ? GLU A 46 GLU A 48 5 ? 3 HELX_P HELX_P4 4 GLU A 57 ? GLU A 59 ? GLU A 57 GLU A 59 5 ? 3 HELX_P HELX_P5 5 GLU A 62 ? GLU A 76 ? GLU A 62 GLU A 76 5 ? 15 HELX_P HELX_P6 6 ALA A 91 ? TRP A 94 ? ALA A 91 TRP A 94 1 ? 4 HELX_P HELX_P7 7 LYS A 100 ? HIS A 103 ? LYS A 100 HIS A 103 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 8 SG ? ? ? 1_555 C F3S . FE3 ? ? A CYS 8 A F3S 108 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 C F3S . FE1 ? ? A CYS 16 A F3S 108 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc3 metalc ? ? A CYS 20 SG ? ? ? 1_555 B SF4 . FE4 ? ? A CYS 20 A SF4 107 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc4 metalc ? ? A CYS 39 SG ? ? ? 1_555 B SF4 . FE1 ? ? A CYS 39 A SF4 107 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc5 metalc ? ? A CYS 42 SG ? ? ? 1_555 B SF4 . FE2 ? ? A CYS 42 A SF4 107 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc6 metalc ? ? A CYS 45 SG ? ? ? 1_555 B SF4 . FE3 ? ? A CYS 45 A SF4 107 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc7 metalc ? ? A CYS 49 SG ? ? ? 1_555 C F3S . FE4 ? ? A CYS 49 A F3S 108 1_555 ? ? ? ? ? ? ? 2.317 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 2 ? VAL A 4 ? PHE A 2 VAL A 4 A 2 ILE A 54 ? SER A 56 ? ILE A 54 SER A 56 B 1 PHE A 25 ? GLU A 27 ? PHE A 25 GLU A 27 B 2 LEU A 32 ? ILE A 34 ? LEU A 32 ILE A 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 3 ? O VAL A 3 N PHE A 55 ? N PHE A 55 B 1 2 O TYR A 26 ? O TYR A 26 N VAL A 33 ? N VAL A 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 107 ? 10 'BINDING SITE FOR RESIDUE SF4 A 107' AC2 Software A F3S 108 ? 7 'BINDING SITE FOR RESIDUE F3S A 108' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 PHE A 2 ? PHE A 2 . ? 1_555 ? 2 AC1 10 CYS A 20 ? CYS A 20 . ? 1_555 ? 3 AC1 10 VAL A 22 ? VAL A 22 . ? 1_555 ? 4 AC1 10 CYS A 24 ? CYS A 24 . ? 1_555 ? 5 AC1 10 PHE A 25 ? PHE A 25 . ? 1_555 ? 6 AC1 10 CYS A 39 ? CYS A 39 . ? 1_555 ? 7 AC1 10 ILE A 40 ? ILE A 40 . ? 1_555 ? 8 AC1 10 CYS A 42 ? CYS A 42 . ? 1_555 ? 9 AC1 10 ALA A 43 ? ALA A 43 . ? 1_555 ? 10 AC1 10 CYS A 45 ? CYS A 45 . ? 1_555 ? 11 AC2 7 CYS A 8 ? CYS A 8 . ? 1_555 ? 12 AC2 7 LYS A 12 ? LYS A 12 . ? 1_555 ? 13 AC2 7 TYR A 13 ? TYR A 13 . ? 1_555 ? 14 AC2 7 THR A 14 ? THR A 14 . ? 1_555 ? 15 AC2 7 ASP A 15 ? ASP A 15 . ? 1_555 ? 16 AC2 7 CYS A 16 ? CYS A 16 . ? 1_555 ? 17 AC2 7 CYS A 49 ? CYS A 49 . ? 1_555 ? # _database_PDB_matrix.entry_id 6FD1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 6FD1 _atom_sites.fract_transf_matrix[1][1] 0.018235 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018235 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010794 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 TRP 78 78 78 TRP TRP A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 HIS 103 103 103 HIS HIS A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ARG 106 106 106 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 1 107 107 SF4 FS4 A . C 3 F3S 1 108 108 F3S FS3 A . D 4 HOH 1 109 109 HOH HOH A . D 4 HOH 2 110 110 HOH HOH A . D 4 HOH 3 111 111 HOH HOH A . D 4 HOH 4 112 112 HOH HOH A . D 4 HOH 5 113 113 HOH HOH A . D 4 HOH 6 114 114 HOH HOH A . D 4 HOH 7 115 115 HOH HOH A . D 4 HOH 8 116 116 HOH HOH A . D 4 HOH 9 117 117 HOH HOH A . D 4 HOH 10 118 118 HOH HOH A . D 4 HOH 11 119 119 HOH HOH A . D 4 HOH 12 120 120 HOH HOH A . D 4 HOH 13 121 121 HOH HOH A . D 4 HOH 14 122 122 HOH HOH A . D 4 HOH 15 123 123 HOH HOH A . D 4 HOH 16 124 124 HOH HOH A . D 4 HOH 17 125 125 HOH HOH A . D 4 HOH 18 126 126 HOH HOH A . D 4 HOH 19 127 127 HOH HOH A . D 4 HOH 20 128 128 HOH HOH A . D 4 HOH 21 129 129 HOH HOH A . D 4 HOH 22 130 130 HOH HOH A . D 4 HOH 23 131 131 HOH HOH A . D 4 HOH 24 132 132 HOH HOH A . D 4 HOH 25 133 133 HOH HOH A . D 4 HOH 26 134 134 HOH HOH A . D 4 HOH 27 135 135 HOH HOH A . D 4 HOH 28 136 136 HOH HOH A . D 4 HOH 29 137 137 HOH HOH A . D 4 HOH 30 138 138 HOH HOH A . D 4 HOH 31 139 139 HOH HOH A . D 4 HOH 32 140 140 HOH HOH A . D 4 HOH 33 141 141 HOH HOH A . D 4 HOH 34 142 142 HOH HOH A . D 4 HOH 35 143 143 HOH HOH A . D 4 HOH 36 144 144 HOH HOH A . D 4 HOH 37 145 145 HOH HOH A . D 4 HOH 38 146 146 HOH HOH A . D 4 HOH 39 147 147 HOH HOH A . D 4 HOH 40 148 148 HOH HOH A . D 4 HOH 41 149 149 HOH HOH A . D 4 HOH 42 150 150 HOH HOH A . D 4 HOH 43 151 151 HOH HOH A . D 4 HOH 44 152 152 HOH HOH A . D 4 HOH 45 153 153 HOH HOH A . D 4 HOH 46 154 154 HOH HOH A . D 4 HOH 47 155 155 HOH HOH A . D 4 HOH 48 156 156 HOH HOH A . D 4 HOH 49 157 157 HOH HOH A . D 4 HOH 50 158 158 HOH HOH A . D 4 HOH 51 159 159 HOH HOH A . D 4 HOH 52 160 160 HOH HOH A . D 4 HOH 53 161 161 HOH HOH A . D 4 HOH 54 162 162 HOH HOH A . D 4 HOH 55 163 163 HOH HOH A . D 4 HOH 56 164 164 HOH HOH A . D 4 HOH 57 165 165 HOH HOH A . D 4 HOH 58 166 166 HOH HOH A . D 4 HOH 59 167 167 HOH HOH A . D 4 HOH 60 168 168 HOH HOH A . D 4 HOH 61 169 169 HOH HOH A . D 4 HOH 62 170 170 HOH HOH A . D 4 HOH 63 171 171 HOH HOH A . D 4 HOH 64 172 172 HOH HOH A . D 4 HOH 65 173 173 HOH HOH A . D 4 HOH 66 174 174 HOH HOH A . D 4 HOH 67 175 175 HOH HOH A . D 4 HOH 68 176 176 HOH HOH A . D 4 HOH 69 177 177 HOH HOH A . D 4 HOH 70 178 178 HOH HOH A . D 4 HOH 71 179 179 HOH HOH A . D 4 HOH 72 180 180 HOH HOH A . D 4 HOH 73 181 181 HOH HOH A . D 4 HOH 74 182 182 HOH HOH A . D 4 HOH 75 183 183 HOH HOH A . D 4 HOH 76 184 184 HOH HOH A . D 4 HOH 77 185 185 HOH HOH A . D 4 HOH 78 186 186 HOH HOH A . D 4 HOH 79 187 187 HOH HOH A . D 4 HOH 80 188 188 HOH HOH A . D 4 HOH 81 189 189 HOH HOH A . D 4 HOH 82 190 190 HOH HOH A . D 4 HOH 83 191 191 HOH HOH A . D 4 HOH 84 192 192 HOH HOH A . D 4 HOH 85 193 193 HOH HOH A . D 4 HOH 86 194 194 HOH HOH A . D 4 HOH 87 195 195 HOH HOH A . D 4 HOH 88 196 196 HOH HOH A . D 4 HOH 89 197 197 HOH HOH A . D 4 HOH 90 198 198 HOH HOH A . D 4 HOH 91 199 199 HOH HOH A . D 4 HOH 92 200 200 HOH HOH A . D 4 HOH 93 201 201 HOH HOH A . D 4 HOH 94 202 202 HOH HOH A . D 4 HOH 95 203 203 HOH HOH A . D 4 HOH 96 204 204 HOH HOH A . D 4 HOH 97 205 205 HOH HOH A . D 4 HOH 98 206 206 HOH HOH A . D 4 HOH 99 207 207 HOH HOH A . D 4 HOH 100 208 208 HOH HOH A . D 4 HOH 101 209 209 HOH HOH A . D 4 HOH 102 210 210 HOH HOH A . D 4 HOH 103 211 211 HOH HOH A . D 4 HOH 104 212 212 HOH HOH A . D 4 HOH 105 213 213 HOH HOH A . D 4 HOH 106 214 214 HOH HOH A . D 4 HOH 107 215 215 HOH HOH A . D 4 HOH 108 216 216 HOH HOH A . D 4 HOH 109 217 217 HOH HOH A . D 4 HOH 110 218 218 HOH HOH A . D 4 HOH 111 219 219 HOH HOH A . D 4 HOH 112 220 220 HOH HOH A . D 4 HOH 113 221 221 HOH HOH A . D 4 HOH 114 223 223 HOH HOH A . D 4 HOH 115 224 224 HOH HOH A . D 4 HOH 116 225 225 HOH HOH A . D 4 HOH 117 226 226 HOH HOH A . D 4 HOH 118 227 227 HOH HOH A . D 4 HOH 119 229 229 HOH HOH A . D 4 HOH 120 230 230 HOH HOH A . D 4 HOH 121 231 231 HOH HOH A . D 4 HOH 122 232 232 HOH HOH A . D 4 HOH 123 233 233 HOH HOH A . D 4 HOH 124 234 234 HOH HOH A . D 4 HOH 125 235 235 HOH HOH A . D 4 HOH 126 236 236 HOH HOH A . D 4 HOH 127 237 237 HOH HOH A . D 4 HOH 128 238 238 HOH HOH A . D 4 HOH 129 239 239 HOH HOH A . D 4 HOH 130 240 240 HOH HOH A . D 4 HOH 131 241 241 HOH HOH A . D 4 HOH 132 242 242 HOH HOH A . D 4 HOH 133 243 243 HOH HOH A . D 4 HOH 134 244 244 HOH HOH A . D 4 HOH 135 245 245 HOH HOH A . D 4 HOH 136 246 246 HOH HOH A . D 4 HOH 137 247 247 HOH HOH A . D 4 HOH 138 248 248 HOH HOH A . D 4 HOH 139 249 249 HOH HOH A . D 4 HOH 140 250 250 HOH HOH A . D 4 HOH 141 251 251 HOH HOH A . D 4 HOH 142 252 252 HOH HOH A . D 4 HOH 143 253 253 HOH HOH A . D 4 HOH 144 254 254 HOH HOH A . D 4 HOH 145 255 255 HOH HOH A . D 4 HOH 146 256 256 HOH HOH A . D 4 HOH 147 257 257 HOH HOH A . D 4 HOH 148 258 258 HOH HOH A . D 4 HOH 149 259 259 HOH HOH A . D 4 HOH 150 260 260 HOH HOH A . D 4 HOH 151 262 262 HOH HOH A . D 4 HOH 152 263 263 HOH HOH A . D 4 HOH 153 264 264 HOH HOH A . D 4 HOH 154 265 265 HOH HOH A . D 4 HOH 155 266 266 HOH HOH A . D 4 HOH 156 267 267 HOH HOH A . D 4 HOH 157 268 268 HOH HOH A . D 4 HOH 158 269 269 HOH HOH A . D 4 HOH 159 270 270 HOH HOH A . D 4 HOH 160 271 271 HOH HOH A . D 4 HOH 161 272 272 HOH HOH A . D 4 HOH 162 273 273 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S1 ? C F3S . ? A F3S 108 ? 1_555 111.9 ? 2 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 116.1 ? 3 S1 ? C F3S . ? A F3S 108 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 103.9 ? 4 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 109.0 ? 5 S1 ? C F3S . ? A F3S 108 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 111.4 ? 6 S3 ? C F3S . ? A F3S 108 ? 1_555 FE3 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 104.3 ? 7 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S1 ? C F3S . ? A F3S 108 ? 1_555 113.7 ? 8 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S2 ? C F3S . ? A F3S 108 ? 1_555 106.8 ? 9 S1 ? C F3S . ? A F3S 108 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S2 ? C F3S . ? A F3S 108 ? 1_555 113.6 ? 10 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 116.0 ? 11 S1 ? C F3S . ? A F3S 108 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 100.4 ? 12 S2 ? C F3S . ? A F3S 108 ? 1_555 FE1 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 106.3 ? 13 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S1 ? B SF4 . ? A SF4 107 ? 1_555 108.5 ? 14 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S2 ? B SF4 . ? A SF4 107 ? 1_555 122.1 ? 15 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S2 ? B SF4 . ? A SF4 107 ? 1_555 102.3 ? 16 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 113.9 ? 17 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 104.0 ? 18 S2 ? B SF4 . ? A SF4 107 ? 1_555 FE4 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 104.0 ? 19 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S2 ? B SF4 . ? A SF4 107 ? 1_555 119.6 ? 20 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 118.3 ? 21 S2 ? B SF4 . ? A SF4 107 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 106.0 ? 22 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 103.2 ? 23 S2 ? B SF4 . ? A SF4 107 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 103.8 ? 24 S3 ? B SF4 . ? A SF4 107 ? 1_555 FE1 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 103.8 ? 25 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S1 ? B SF4 . ? A SF4 107 ? 1_555 99.4 ? 26 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 119.3 ? 27 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S3 ? B SF4 . ? A SF4 107 ? 1_555 106.7 ? 28 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 121.5 ? 29 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 103.8 ? 30 S3 ? B SF4 . ? A SF4 107 ? 1_555 FE2 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 104.0 ? 31 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S1 ? B SF4 . ? A SF4 107 ? 1_555 110.6 ? 32 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S2 ? B SF4 . ? A SF4 107 ? 1_555 119.9 ? 33 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S2 ? B SF4 . ? A SF4 107 ? 1_555 104.4 ? 34 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 111.8 ? 35 S1 ? B SF4 . ? A SF4 107 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 104.7 ? 36 S2 ? B SF4 . ? A SF4 107 ? 1_555 FE3 ? B SF4 . ? A SF4 107 ? 1_555 S4 ? B SF4 . ? A SF4 107 ? 1_555 104.2 ? 37 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S2 ? C F3S . ? A F3S 108 ? 1_555 112.2 ? 38 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 108.0 ? 39 S2 ? C F3S . ? A F3S 108 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S3 ? C F3S . ? A F3S 108 ? 1_555 105.8 ? 40 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 112.6 ? 41 S2 ? C F3S . ? A F3S 108 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 114.8 ? 42 S3 ? C F3S . ? A F3S 108 ? 1_555 FE4 ? C F3S . ? A F3S 108 ? 1_555 S4 ? C F3S . ? A F3S 108 ? 1_555 102.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-11-12 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_initial_refinement_model 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal TRIVIAL 'model building' CASE ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 TRIVIAL phasing CASE ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 15 ? ? CG A ASP 15 ? ? OD1 A ASP 15 ? ? 124.05 118.30 5.75 0.90 N 2 1 CB A HIS 35 ? ? CG A HIS 35 ? ? CD2 A HIS 35 ? ? 138.64 131.40 7.24 1.20 N 3 1 C A PRO 89 ? ? N A ASP 90 ? ? CA A ASP 90 ? ? 106.56 121.70 -15.14 2.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 5 ? ? -117.40 -169.17 2 1 ASP A 90 ? ? -99.57 41.20 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IRON/SULFUR CLUSTER' SF4 3 'FE3-S4 CLUSTER' F3S 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5FD1 _pdbx_initial_refinement_model.details 'PDB ENTRY 5FD1' #