HEADER LYASE 16-JAN-18 6FI2 TITLE VEXL: A PERIPLASMIC DEPOLYMERASE PROVIDES NEW INSIGHT INTO ABC TITLE 2 TRANSPORTER-DEPENDENT SECRETION OF BACTERIAL CAPSULAR POLYSACCHARIDES COMPND MOL_ID: 1; COMPND 2 MOLECULE: VEXL; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACHROMOBACTER DENITRIFICANS; SOURCE 3 ORGANISM_COMMON: ALCALIGENES DENITRIFICANS; SOURCE 4 ORGANISM_TAXID: 32002; SOURCE 5 GENE: VEXL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CARBOHYDRATE BIOSYNTHESIS, CELL-SURFACE, PECTATE LYASE, VI ANTIGEN, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.H.NAISMITH,S.A.MCMAHON,A.LE BAS,S.D.LISTON,C.WHITFIELD REVDAT 3 29-JUL-20 6FI2 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 30-MAY-18 6FI2 1 JRNL REVDAT 1 02-MAY-18 6FI2 0 JRNL AUTH S.D.LISTON,S.A.MCMAHON,A.LE BAS,M.D.L.SUITS,J.H.NAISMITH, JRNL AUTH 2 C.WHITFIELD JRNL TITL PERIPLASMIC DEPOLYMERASE PROVIDES INSIGHT INTO ABC JRNL TITL 2 TRANSPORTER-DEPENDENT SECRETION OF BACTERIAL CAPSULAR JRNL TITL 3 POLYSACCHARIDES. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E4870 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29735649 JRNL DOI 10.1073/PNAS.1801336115 REMARK 2 REMARK 2 RESOLUTION. 1.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 100829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 5200 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7360 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 394 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2942 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.16000 REMARK 3 B22 (A**2) : -1.16000 REMARK 3 B33 (A**2) : 2.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.037 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.037 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.864 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3111 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2803 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4219 ; 1.561 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6491 ; 0.991 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 381 ; 6.921 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;34.039 ;23.377 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 499 ;11.640 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;14.286 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 456 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3546 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 663 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1518 ; 1.524 ; 1.709 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1517 ; 1.519 ; 1.707 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1901 ; 2.004 ; 2.569 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1902 ; 2.003 ; 2.570 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1593 ; 2.192 ; 2.084 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1594 ; 2.192 ; 2.085 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2319 ; 2.646 ; 3.003 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3390 ; 3.003 ;21.289 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3384 ; 3.001 ;21.268 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5912 ; 2.277 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 158 ;22.198 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5926 ; 9.106 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972422 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL-CUT REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 106029 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.220 REMARK 200 RESOLUTION RANGE LOW (A) : 60.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.58 M SODIUM MALONATE, 0.1 M BISTRIS REMARK 280 HCL PH 6.5, 0.13 M AMMONIUM CITRATE, AND 2.5 % (V/V) 2-METHYL-2, REMARK 280 4-PENTANEDIOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.34000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.34000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.42000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.34000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.34000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.42000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.34000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.34000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.42000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.34000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.34000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.42000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 819 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 5 REMARK 465 THR A 6 REMARK 465 VAL A 7 REMARK 465 MET A 8 REMARK 465 VAL A 9 REMARK 465 TRP A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 THR A 13 REMARK 465 LEU A 14 REMARK 465 THR A 15 REMARK 465 GLY A 16 REMARK 465 LEU A 17 REMARK 465 TYR A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 GLN A 27 REMARK 465 ALA A 393 REMARK 465 THR A 394 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 770 O HOH A 808 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 121 -16.79 80.35 REMARK 500 ASN A 131 68.78 69.80 REMARK 500 ARG A 142 18.15 56.25 REMARK 500 ASN A 154 68.43 70.19 REMARK 500 ASN A 154 68.70 70.19 REMARK 500 ASP A 158 67.70 62.88 REMARK 500 ASP A 171 -79.68 -98.80 REMARK 500 ASP A 182 64.79 62.72 REMARK 500 ASN A 194 -84.25 -85.68 REMARK 500 ASN A 200 151.94 71.77 REMARK 500 ARG A 232 63.24 62.16 REMARK 500 ASN A 233 52.09 -119.55 REMARK 500 PHE A 238 -40.33 72.87 REMARK 500 PHE A 253 -62.46 -128.56 REMARK 500 ARG A 305 51.67 -103.07 REMARK 500 VAL A 349 -57.15 -126.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 843 DISTANCE = 6.03 ANGSTROMS DBREF1 6FI2 A 1 402 UNP A0A160EBC2_ACHDE DBREF2 6FI2 A A0A160EBC2 1 402 SEQADV 6FI2 HIS A 403 UNP A0A160EBC EXPRESSION TAG SEQADV 6FI2 HIS A 404 UNP A0A160EBC EXPRESSION TAG SEQADV 6FI2 HIS A 405 UNP A0A160EBC EXPRESSION TAG SEQADV 6FI2 HIS A 406 UNP A0A160EBC EXPRESSION TAG SEQADV 6FI2 HIS A 407 UNP A0A160EBC EXPRESSION TAG SEQADV 6FI2 HIS A 408 UNP A0A160EBC EXPRESSION TAG SEQRES 1 A 408 MET ARG LEU ARG LYS THR VAL MET VAL TRP LEU LEU THR SEQRES 2 A 408 LEU THR GLY LEU TYR GLY GLY ALA ALA ALA ALA SER GLY SEQRES 3 A 408 GLN CYS ALA ALA PRO ASP GLU HIS CYS PRO PHE VAL ALA SEQRES 4 A 408 SER LEU LEU ALA GLN ARG GLU GLY TYR GLY ALA LYS ALA SEQRES 5 A 408 THR GLY GLY LEU GLY GLY LYS PHE ILE GLU VAL THR SER SEQRES 6 A 408 ASP GLN ASP ALA GLY PRO GLY THR LEU ARG ALA ALA LEU SEQRES 7 A 408 ALA GLN ALA ARG LYS GLY PRO ALA TRP ILE ARG PHE ALA SEQRES 8 A 408 SER ASP MET THR ILE VAL LEU LYS THR GLN LEU ARG VAL SEQRES 9 A 408 PRO SER ASN THR THR ILE ASP GLY ARG GLY LYS ARG VAL SEQRES 10 A 408 ALA LEU ILE ASP ASP GLY LEU GLY VAL TYR GLY ALA LYS SEQRES 11 A 408 ASN VAL ILE LEU THR HIS LEU THR ILE ASP GLY ARG LEU SEQRES 12 A 408 THR ARG LEU THR GLN ALA VAL ASN VAL ALA ASN ASP SER SEQRES 13 A 408 ARG ASP VAL TRP VAL ASP HIS MET ASP LEU SER ARG MET SEQRES 14 A 408 SER ASP ARG LEU LEU ASN VAL LYS ASN GLY SER THR ASP SEQRES 15 A 408 VAL THR ILE SER TRP THR LYS PHE HIS ASN SER ASN LYS SEQRES 16 A 408 VAL MET LEU LEU ASN ASN ILE THR SER LYS ASN LEU PHE SEQRES 17 A 408 GLN ASN TYR GLU ARG ASP SER ILE ALA ARG VAL THR LEU SEQRES 18 A 408 HIS HIS ASN TYR PHE PHE ASN THR VAL GLN ARG ASN PRO SEQRES 19 A 408 ARG ALA GLN PHE GLY THR PHE HIS LEU PHE ASN ASN LEU SEQRES 20 A 408 LEU GLU ASN TRP ASP PHE TYR GLY MET SER PHE SER LEU SEQRES 21 A 408 GLU ALA LYS ALA LEU VAL GLU GLY ASN ILE PHE ASN ASN SEQRES 22 A 408 ASP ALA GLN ARG LYS CYS VAL GLU PRO GLU PHE TYR PRO SEQRES 23 A 408 THR VAL GLU GLY ILE ASN VAL ASN TYR CYS ARG TYR ILE SEQRES 24 A 408 PRO ILE ALA PRO ALA ARG SER ALA LEU ASP ASN GLY ASP SEQRES 25 A 408 SER ASP ARG GLY ALA TYR GLU LYS ARG LYS ALA ASP HIS SEQRES 26 A 408 GLY TYR THR ARG ASP PHE LYS ALA PHE LEU ARG LEU LYS SEQRES 27 A 408 ASP ASN LEU TYR LEU GLY ASP ALA LYS PRO VAL LEU LYS SEQRES 28 A 408 ASP TYR ARG PRO GLU SER ALA PRO THR PRO SER TYR CYS SEQRES 29 A 408 TYR GLY TYR GLU LYS ALA THR PRO GLU LEU ALA GLU LYS SEQRES 30 A 408 ILE ARG LYS PHE ALA GLY ASN THR SER GLY ASP THR PRO SEQRES 31 A 408 LEU PRO ALA THR ARG THR GLY ALA GLY CYS PRO GLY HIS SEQRES 32 A 408 HIS HIS HIS HIS HIS HET DJB B 1 19 HET DJB B 2 18 HET DJE B 3 15 HET MLI A 501 7 HETNAM DJB 3-O-ACETYL-2-ACETAMIDO-2-DEOXY-ALPHA-D- HETNAM 2 DJB GALACTOPYRANURONIC ACID HETNAM DJE 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANURONIC ACID HETNAM MLI MALONATE ION FORMUL 2 DJB 2(C10 H15 N O8) FORMUL 2 DJE C8 H13 N O7 FORMUL 3 MLI C3 H2 O4 2- FORMUL 4 HOH *243(H2 O) HELIX 1 AA1 CYS A 35 ALA A 43 1 9 HELIX 2 AA2 THR A 73 ARG A 82 1 10 HELIX 3 AA3 ASN A 210 SER A 215 1 6 HELIX 4 AA4 TYR A 295 ILE A 299 5 5 HELIX 5 AA5 ALA A 302 SER A 306 5 5 HELIX 6 AA6 ASP A 314 GLY A 326 1 13 HELIX 7 AA7 ARG A 354 ALA A 358 5 5 HELIX 8 AA8 THR A 371 ALA A 382 1 12 SHEET 1 AA110 LYS A 59 VAL A 63 0 SHEET 2 AA110 ALA A 86 PHE A 90 1 O ARG A 89 N VAL A 63 SHEET 3 AA110 THR A 108 ASP A 111 1 O THR A 109 N ILE A 88 SHEET 4 AA110 LYS A 130 THR A 135 1 O THR A 135 N ILE A 110 SHEET 5 AA110 ARG A 157 ASP A 162 1 O ASP A 162 N LEU A 134 SHEET 6 AA110 THR A 181 SER A 186 1 O THR A 184 N VAL A 161 SHEET 7 AA110 ARG A 218 HIS A 222 1 O THR A 220 N ILE A 185 SHEET 8 AA110 THR A 240 PHE A 244 1 O HIS A 242 N LEU A 221 SHEET 9 AA110 LYS A 263 GLU A 267 1 O LYS A 263 N PHE A 241 SHEET 10 AA110 PHE A 334 LYS A 338 1 O ARG A 336 N VAL A 266 SHEET 1 AA2 9 MET A 94 VAL A 97 0 SHEET 2 AA2 9 VAL A 117 ILE A 120 1 O ALA A 118 N ILE A 96 SHEET 3 AA2 9 THR A 138 ASP A 140 1 O THR A 138 N LEU A 119 SHEET 4 AA2 9 ASP A 165 SER A 167 1 O ASP A 165 N ILE A 139 SHEET 5 AA2 9 LYS A 189 LYS A 195 1 O LYS A 189 N LEU A 166 SHEET 6 AA2 9 TYR A 225 GLN A 231 1 O TYR A 225 N PHE A 190 SHEET 7 AA2 9 LEU A 247 GLU A 249 1 O GLU A 249 N PHE A 226 SHEET 8 AA2 9 ILE A 270 ASN A 273 1 O ILE A 270 N LEU A 248 SHEET 9 AA2 9 LEU A 341 GLY A 344 1 O LEU A 343 N PHE A 271 SHEET 1 AA3 7 LEU A 102 ARG A 103 0 SHEET 2 AA3 7 LEU A 124 TYR A 127 1 O GLY A 125 N LEU A 102 SHEET 3 AA3 7 GLN A 148 ALA A 153 1 O ASN A 151 N VAL A 126 SHEET 4 AA3 7 ARG A 172 LYS A 177 1 O ASN A 175 N VAL A 152 SHEET 5 AA3 7 MET A 197 LEU A 199 1 O LEU A 198 N VAL A 176 SHEET 6 AA3 7 ARG A 235 GLN A 237 1 O ARG A 235 N MET A 197 SHEET 7 AA3 7 SER A 257 SER A 259 1 O SER A 257 N ALA A 236 SHEET 1 AA4 2 PHE A 284 THR A 287 0 SHEET 2 AA4 2 GLY A 290 VAL A 293 -1 O ASN A 292 N TYR A 285 SSBOND 1 CYS A 28 CYS A 35 1555 1555 2.09 SSBOND 2 CYS A 279 CYS A 296 1555 1555 1.97 SSBOND 3 CYS A 364 CYS A 400 1555 1555 2.06 LINK O4 DJB B 1 C1 DJB B 2 1555 1555 1.47 LINK O4 DJB B 2 C1 DJE B 3 1555 1555 1.47 CISPEP 1 ASN A 233 PRO A 234 0 -1.34 CRYST1 94.680 94.680 78.840 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010562 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010562 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012684 0.00000