HEADER STRUCTURAL PROTEIN 17-JAN-18 6FI5 TITLE CRYSTAL STRUCTURE OF C-TERMINAL MODIFIED TAU PEPTIDE-HYBRID 3.2D WITH TITLE 2 14-3-3SIGMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN SIGMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EPITHELIAL CELL MARKER PROTEIN 1,STRATIFIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: THR-PRO-SEP-LEU-PRO-DAL; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFN, HME1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS TAU 14-3-3 ALZHEIMER, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ANDREI,F.A.MEIJER,C.OTTMANN,L.G.MILROY REVDAT 3 17-JAN-24 6FI5 1 LINK REVDAT 2 28-NOV-18 6FI5 1 JRNL ATOM REVDAT 1 16-MAY-18 6FI5 0 JRNL AUTH S.A.ANDREI,F.A.MEIJER,J.F.NEVES,L.BRUNSVELD,I.LANDRIEU, JRNL AUTH 2 C.OTTMANN,L.G.MILROY JRNL TITL INHIBITION OF 14-3-3/TAU BY HYBRID SMALL-MOLECULE PEPTIDES JRNL TITL 2 OPERATING VIA TWO DIFFERENT BINDING MODES. JRNL REF ACS CHEM NEUROSCI V. 9 2639 2018 JRNL REFN ESSN 1948-7193 JRNL PMID 29722962 JRNL DOI 10.1021/ACSCHEMNEURO.8B00118 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3978 - 3.8914 1.00 2660 150 0.1829 0.2506 REMARK 3 2 3.8914 - 3.0889 1.00 2595 131 0.1467 0.1691 REMARK 3 3 3.0889 - 2.6985 1.00 2541 129 0.1575 0.1782 REMARK 3 4 2.6985 - 2.4518 1.00 2519 142 0.1570 0.2021 REMARK 3 5 2.4518 - 2.2761 1.00 2526 138 0.1520 0.1980 REMARK 3 6 2.2761 - 2.1419 1.00 2523 126 0.1873 0.2202 REMARK 3 7 2.1419 - 2.0346 1.00 2517 135 0.2037 0.2327 REMARK 3 8 2.0346 - 1.9460 1.00 2474 142 0.1988 0.2608 REMARK 3 9 1.9460 - 1.8711 1.00 2505 136 0.2894 0.3332 REMARK 3 10 1.8711 - 1.8065 1.00 2498 136 0.2621 0.3033 REMARK 3 11 1.8065 - 1.7501 1.00 2481 126 0.2824 0.3192 REMARK 3 12 1.7501 - 1.7000 1.00 2490 131 0.3103 0.3168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2034 REMARK 3 ANGLE : 0.607 2763 REMARK 3 CHIRALITY : 0.035 306 REMARK 3 PLANARITY : 0.004 360 REMARK 3 DIHEDRAL : 13.841 1287 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -4 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6910 -13.6356 8.1837 REMARK 3 T TENSOR REMARK 3 T11: 0.0858 T22: 0.0635 REMARK 3 T33: 0.0766 T12: -0.0094 REMARK 3 T13: 0.0005 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.5177 L22: 2.8902 REMARK 3 L33: 3.0303 L12: -0.8271 REMARK 3 L13: 0.5080 L23: 0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.0449 S13: 0.0483 REMARK 3 S21: 0.2367 S22: 0.0613 S23: -0.1110 REMARK 3 S31: -0.0134 S32: -0.0234 S33: -0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5690 -6.1819 -10.7484 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.1078 REMARK 3 T33: 0.0955 T12: -0.0354 REMARK 3 T13: -0.0192 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.4495 L22: 5.2149 REMARK 3 L33: 2.1972 L12: -0.1616 REMARK 3 L13: 0.0019 L23: -2.8424 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: 0.0397 S13: 0.0486 REMARK 3 S21: -0.1910 S22: 0.0541 S23: 0.0583 REMARK 3 S31: -0.0191 S32: -0.0461 S33: -0.1255 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6123 -21.9285 -8.4420 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: 0.0969 REMARK 3 T33: 0.0899 T12: -0.0207 REMARK 3 T13: -0.0027 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 2.4443 L22: 4.9807 REMARK 3 L33: 3.6792 L12: -1.3462 REMARK 3 L13: 1.6110 L23: -2.2078 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: -0.0189 S13: -0.1047 REMARK 3 S21: -0.0917 S22: -0.0027 S23: -0.0799 REMARK 3 S31: 0.1288 S32: 0.1273 S33: -0.0038 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1557 -27.3017 -15.8778 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.1396 REMARK 3 T33: 0.1343 T12: -0.0066 REMARK 3 T13: -0.0021 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 5.8857 L22: 5.7831 REMARK 3 L33: 6.6273 L12: 5.5029 REMARK 3 L13: -4.9492 L23: -5.6825 REMARK 3 S TENSOR REMARK 3 S11: -0.0928 S12: 0.0238 S13: -0.1584 REMARK 3 S21: -0.4365 S22: 0.0574 S23: 0.0146 REMARK 3 S31: 0.3256 S32: 0.1532 S33: 0.0551 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5498 -24.5169 -10.2909 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.1163 REMARK 3 T33: 0.1242 T12: -0.0190 REMARK 3 T13: -0.0089 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.8987 L22: 2.3106 REMARK 3 L33: 3.9755 L12: 0.7355 REMARK 3 L13: -0.5577 L23: -1.6012 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: 0.0149 S13: 0.0321 REMARK 3 S21: 0.0234 S22: 0.0867 S23: 0.1083 REMARK 3 S31: -0.0308 S32: -0.1942 S33: -0.0406 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2245 -14.3633 -9.5655 REMARK 3 T TENSOR REMARK 3 T11: 0.1743 T22: 0.2204 REMARK 3 T33: 0.2408 T12: 0.0053 REMARK 3 T13: -0.0037 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 3.3153 L22: 9.9632 REMARK 3 L33: 5.5809 L12: -0.1919 REMARK 3 L13: 2.3791 L23: 6.0003 REMARK 3 S TENSOR REMARK 3 S11: -0.1332 S12: 0.2439 S13: 0.5022 REMARK 3 S21: -0.3313 S22: -0.1047 S23: -0.1234 REMARK 3 S31: -1.1715 S32: -0.3188 S33: 0.1126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FI5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008374. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31995 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.22500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 1.90300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 5HF3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG400, 20 MM HEPES, PH 7.1, 5% REMARK 280 GLYCEROL, 0.19 M CACL2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.18000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.18000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.96400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.10450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.96400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.10450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.18000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.96400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.10450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 31.18000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.96400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.10450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 303 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 657 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 734 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 745 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 747 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 72 REMARK 465 GLY A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 LYS A 77 REMARK 465 GLY A 137 REMARK 465 ASP A 138 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 410 O HOH A 620 1.99 REMARK 500 O HOH A 621 O HOH A 650 2.00 REMARK 500 O HOH A 458 O HOH A 537 2.00 REMARK 500 O HOH A 497 O HOH A 530 2.03 REMARK 500 O HOH A 420 O HOH A 526 2.03 REMARK 500 O HOH A 547 O HOH A 591 2.03 REMARK 500 O HOH A 598 O HOH A 653 2.03 REMARK 500 O HOH A 408 O HOH A 497 2.05 REMARK 500 O HOH A 608 O HOH A 710 2.07 REMARK 500 O HOH A 415 O HOH A 716 2.07 REMARK 500 O HOH A 573 O HOH A 615 2.07 REMARK 500 O HOH A 413 O HOH A 681 2.09 REMARK 500 O HOH B 207 O HOH B 208 2.09 REMARK 500 O HOH A 406 O HOH A 422 2.11 REMARK 500 O HOH A 534 O HOH A 713 2.12 REMARK 500 O HOH A 435 O HOH A 576 2.12 REMARK 500 O HOH A 406 O HOH A 632 2.13 REMARK 500 O HOH A 576 O HOH A 724 2.15 REMARK 500 O DAL B 8 N10 60H B 101 2.17 REMARK 500 OD2 ASP A 211 O HOH A 401 2.18 REMARK 500 O HOH A 685 O HOH B 213 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 531 O HOH A 631 3555 1.97 REMARK 500 O HOH A 449 O HOH A 598 4555 2.01 REMARK 500 O HOH A 714 O HOH A 714 3554 2.10 REMARK 500 O HOH A 729 O HOH A 743 4555 2.11 REMARK 500 O HOH A 589 O HOH A 589 4555 2.12 REMARK 500 O HOH A 531 O HOH A 531 3555 2.13 REMARK 500 O HOH A 404 O HOH A 648 4555 2.19 REMARK 500 O HOH A 404 O HOH A 651 6445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 18 78.26 -108.05 REMARK 500 ASN A 70 62.22 -107.09 REMARK 500 HIS A 106 40.32 -144.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 745 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 747 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH B 217 DISTANCE = 5.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 2 OE1 REMARK 620 2 GLU A 2 OE1 0.0 REMARK 620 3 HOH A 407 O 73.6 73.6 REMARK 620 4 HOH A 407 O 82.3 82.3 146.9 REMARK 620 5 HOH A 593 O 79.0 79.0 128.5 66.2 REMARK 620 6 HOH A 593 O 138.5 138.5 66.2 128.5 135.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 8 OE1 REMARK 620 2 GLU A 80 OE1 34.2 REMARK 620 3 GLU A 80 OE2 36.5 2.6 REMARK 620 4 HOH A 404 O 35.4 5.1 4.2 REMARK 620 5 HOH A 465 O 36.6 2.5 0.6 4.8 REMARK 620 6 HOH A 648 O 36.8 4.7 2.9 1.8 3.5 REMARK 620 7 HOH A 704 O 34.4 2.3 2.5 2.7 3.0 2.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 35 OE1 REMARK 620 2 GLU A 35 OE2 47.1 REMARK 620 3 GLU A 110 O 85.5 87.1 REMARK 620 4 GLU A 188 OE2 117.6 89.9 42.7 REMARK 620 5 HOH A 451 O 115.6 87.6 42.3 2.3 REMARK 620 6 HOH A 489 O 117.7 87.0 46.4 4.8 4.2 REMARK 620 7 HOH A 604 O 115.7 85.5 45.1 5.1 3.5 2.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 89 OE2 REMARK 620 2 HOH A 412 O 94.5 REMARK 620 3 HOH A 625 O 100.1 139.8 REMARK 620 4 HOH A 629 O 103.3 74.3 66.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 161 O REMARK 620 2 HOH A 499 O 80.3 REMARK 620 3 HOH A 584 O 80.8 69.9 REMARK 620 4 HOH A 603 O 80.3 154.9 91.4 REMARK 620 5 HOH A 642 O 163.1 104.1 85.4 90.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 60H B 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FAU RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY REMARK 900 RELATED ID: 6FAV RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY REMARK 900 RELATED ID: 6FAW RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY REMARK 900 RELATED ID: 6FBW RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY REMARK 900 RELATED ID: 6FBY RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY REMARK 900 RELATED ID: 6FI4 RELATED DB: PDB REMARK 900 SIMILAR LIGAND IN SAME STUDY DBREF 6FI5 A 1 231 UNP P31947 1433S_HUMAN 1 231 DBREF 6FI5 B 3 8 PDB 6FI5 6FI5 3 8 SEQADV 6FI5 GLY A -4 UNP P31947 EXPRESSION TAG SEQADV 6FI5 ALA A -3 UNP P31947 EXPRESSION TAG SEQADV 6FI5 MET A -2 UNP P31947 EXPRESSION TAG SEQADV 6FI5 GLY A -1 UNP P31947 EXPRESSION TAG SEQADV 6FI5 SER A 0 UNP P31947 EXPRESSION TAG SEQRES 1 A 236 GLY ALA MET GLY SER MET GLU ARG ALA SER LEU ILE GLN SEQRES 2 A 236 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP SEQRES 3 A 236 MET ALA ALA PHE MET LYS GLY ALA VAL GLU LYS GLY GLU SEQRES 4 A 236 GLU LEU SER CYS GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 A 236 TYR LYS ASN VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG SEQRES 6 A 236 VAL LEU SER SER ILE GLU GLN LYS SER ASN GLU GLU GLY SEQRES 7 A 236 SER GLU GLU LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU SEQRES 8 A 236 LYS VAL GLU THR GLU LEU GLN GLY VAL CYS ASP THR VAL SEQRES 9 A 236 LEU GLY LEU LEU ASP SER HIS LEU ILE LYS GLU ALA GLY SEQRES 10 A 236 ASP ALA GLU SER ARG VAL PHE TYR LEU LYS MET LYS GLY SEQRES 11 A 236 ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA THR GLY ASP SEQRES 12 A 236 ASP LYS LYS ARG ILE ILE ASP SER ALA ARG SER ALA TYR SEQRES 13 A 236 GLN GLU ALA MET ASP ILE SER LYS LYS GLU MET PRO PRO SEQRES 14 A 236 THR ASN PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER SEQRES 15 A 236 VAL PHE HIS TYR GLU ILE ALA ASN SER PRO GLU GLU ALA SEQRES 16 A 236 ILE SER LEU ALA LYS THR THR PHE ASP GLU ALA MET ALA SEQRES 17 A 236 ASP LEU HIS THR LEU SER GLU ASP SER TYR LYS ASP SER SEQRES 18 A 236 THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU SEQRES 19 A 236 TRP THR SEQRES 1 B 6 THR PRO SEP LEU PRO DAL HET SEP B 5 13 HET DAL B 8 10 HET CL A 301 1 HET MG A 302 1 HET NA A 303 1 HET NA A 304 1 HET NA A 305 1 HET NA A 306 1 HET 60H B 101 18 HETNAM SEP PHOSPHOSERINE HETNAM DAL D-ALANINE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM 60H (2~{S})-2-(DIPHENYLMETHYL)PYRROLIDINE HETSYN SEP PHOSPHONOSERINE FORMUL 2 SEP C3 H8 N O6 P FORMUL 2 DAL C3 H7 N O2 FORMUL 3 CL CL 1- FORMUL 4 MG MG 2+ FORMUL 5 NA 4(NA 1+) FORMUL 9 60H C17 H19 N FORMUL 10 HOH *363(H2 O) HELIX 1 AA1 GLU A 2 ALA A 16 1 15 HELIX 2 AA2 ARG A 18 GLU A 31 1 14 HELIX 3 AA3 SER A 37 SER A 69 1 33 HELIX 4 AA4 PRO A 79 SER A 105 1 27 HELIX 5 AA5 HIS A 106 ALA A 111 1 6 HELIX 6 AA6 ASP A 113 ALA A 135 1 23 HELIX 7 AA7 LYS A 140 MET A 162 1 23 HELIX 8 AA8 ASN A 166 ILE A 183 1 18 HELIX 9 AA9 SER A 186 ALA A 203 1 18 HELIX 10 AB1 ASP A 204 LEU A 208 5 5 HELIX 11 AB2 SER A 209 THR A 231 1 23 LINK C PRO B 4 N SEP B 5 1555 1555 1.33 LINK C SEP B 5 N LEU B 6 1555 1555 1.33 LINK C PRO B 7 N DAL B 8 1555 1555 1.33 LINK C DAL B 8 N10 60H B 101 1555 1555 1.43 LINK OE1 GLU A 2 NA NA A 303 1555 1555 2.33 LINK OE1 GLU A 2 NA NA A 303 1555 3555 2.33 LINK OE1 GLN A 8 NA NA A 305 1555 4555 2.53 LINK OE1 GLU A 35 MG MG A 302 1555 6445 2.27 LINK OE2 GLU A 35 MG MG A 302 1555 6445 2.98 LINK OE1 GLU A 80 NA NA A 305 1555 1555 2.48 LINK OE2 GLU A 80 NA NA A 305 1555 1555 2.91 LINK OE2 GLU A 89 NA NA A 306 1555 1555 2.40 LINK O GLU A 110 MG MG A 302 1555 6445 2.31 LINK O GLU A 161 NA NA A 304 1555 1555 2.26 LINK OE2 GLU A 188 MG MG A 302 1555 1555 2.36 LINK MG MG A 302 O HOH A 451 1555 1555 2.23 LINK MG MG A 302 O HOH A 489 1555 6444 2.17 LINK MG MG A 302 O HOH A 604 1555 6444 2.44 LINK NA NA A 303 O HOH A 407 1555 1555 2.55 LINK NA NA A 303 O HOH A 407 1555 3555 2.55 LINK NA NA A 303 O HOH A 593 1555 1555 2.44 LINK NA NA A 303 O HOH A 593 1555 3555 2.44 LINK NA NA A 304 O HOH A 499 1555 1555 2.39 LINK NA NA A 304 O HOH A 584 1555 1555 2.36 LINK NA NA A 304 O HOH A 603 1555 1555 2.50 LINK NA NA A 304 O HOH A 642 1555 6445 2.28 LINK NA NA A 305 O HOH A 404 1555 4555 2.73 LINK NA NA A 305 O HOH A 465 1555 1555 2.97 LINK NA NA A 305 O HOH A 648 1555 1555 2.80 LINK NA NA A 305 O HOH A 704 1555 1555 2.36 LINK NA NA A 306 O HOH A 412 1555 1555 2.30 LINK NA NA A 306 O HOH A 625 1555 1555 2.25 LINK NA NA A 306 O HOH A 629 1555 1555 2.43 CISPEP 1 SER A 105 HIS A 106 0 3.84 SITE 1 AC1 3 LYS A 9 HOH A 690 HOH A 693 SITE 1 AC2 6 GLU A 35 GLU A 110 GLU A 188 HOH A 451 SITE 2 AC2 6 HOH A 489 HOH A 604 SITE 1 AC3 3 GLU A 2 HOH A 407 HOH A 593 SITE 1 AC4 5 GLU A 161 HOH A 499 HOH A 584 HOH A 603 SITE 2 AC4 5 HOH A 642 SITE 1 AC5 6 GLN A 8 GLU A 80 HOH A 404 HOH A 465 SITE 2 AC5 6 HOH A 648 HOH A 704 SITE 1 AC6 4 GLU A 89 HOH A 412 HOH A 625 HOH A 629 SITE 1 AC7 8 ASN A 42 SER A 45 PHE A 119 LYS A 122 SITE 2 AC7 8 ILE A 168 LEU B 6 PRO B 7 DAL B 8 CRYST1 81.928 112.209 62.360 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012206 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008912 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016036 0.00000