HEADER TRANSFERASE 19-JAN-18 6FJ0 TITLE CRYSTAL STRUCTURE OF ERK2 IN COMPLEX WITH AN ADENOSINE DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAPK 1,ERT1,EXTRACELLULAR SIGNAL-REGULATED KINASE 2,ERK-2, COMPND 5 MAP KINASE ISOFORM P42,P42-MAPK,MITOGEN-ACTIVATED PROTEIN KINASE 2, COMPND 6 MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: MAPK1, ERK2, MAPK, PRKM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GELIN,G.LABESSE REVDAT 2 17-JAN-24 6FJ0 1 REMARK REVDAT 1 30-JAN-19 6FJ0 0 JRNL AUTH M.GELIN,S.POCHET,G.LABESSE JRNL TITL CRYSTAL STRUCTURE OF ERK2 IN COMPLEX WITH AN ADENOSINE JRNL TITL 2 DERIVATIVE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 44235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 4011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8152 - 5.0945 0.97 2805 132 0.2023 0.2179 REMARK 3 2 5.0945 - 4.0446 0.90 2536 161 0.1471 0.1602 REMARK 3 3 4.0446 - 3.5336 0.91 2610 127 0.1459 0.1623 REMARK 3 4 3.5336 - 3.2106 0.92 2678 125 0.1500 0.1776 REMARK 3 5 3.2106 - 2.9805 0.92 2666 128 0.1578 0.1543 REMARK 3 6 2.9805 - 2.8048 0.92 2642 137 0.1578 0.2048 REMARK 3 7 2.8048 - 2.6644 0.92 2603 157 0.1581 0.1774 REMARK 3 8 2.6644 - 2.5484 0.92 2588 156 0.1592 0.2010 REMARK 3 9 2.5484 - 2.4503 0.92 2663 148 0.1571 0.2100 REMARK 3 10 2.4503 - 2.3658 0.92 2621 152 0.1577 0.2092 REMARK 3 11 2.3658 - 2.2918 0.93 2609 159 0.1587 0.2046 REMARK 3 12 2.2918 - 2.2263 0.92 2652 142 0.1564 0.1854 REMARK 3 13 2.2263 - 2.1677 0.93 2690 138 0.1512 0.1809 REMARK 3 14 2.1677 - 2.1148 0.93 2568 172 0.1541 0.1904 REMARK 3 15 2.1148 - 2.0667 0.94 2723 167 0.1511 0.1657 REMARK 3 16 2.0667 - 2.0227 0.94 2657 134 0.1607 0.2090 REMARK 3 17 2.0227 - 1.9823 0.94 2751 102 0.1731 0.2356 REMARK 3 18 1.9823 - 1.9449 0.93 2672 112 0.1797 0.2291 REMARK 3 19 1.9449 - 1.9101 0.94 2721 152 0.1676 0.2059 REMARK 3 20 1.9101 - 1.8778 0.94 2702 114 0.1769 0.1946 REMARK 3 21 1.8778 - 1.8475 0.94 2680 135 0.1732 0.2362 REMARK 3 22 1.8475 - 1.8190 0.95 2775 100 0.1777 0.2194 REMARK 3 23 1.8190 - 1.7923 0.94 2663 139 0.1874 0.2262 REMARK 3 24 1.7923 - 1.7671 0.94 2762 135 0.2005 0.2420 REMARK 3 25 1.7671 - 1.7432 0.95 2681 134 0.2130 0.2763 REMARK 3 26 1.7432 - 1.7205 0.94 2681 151 0.2276 0.2948 REMARK 3 27 1.7205 - 1.6990 0.93 2654 141 0.2393 0.2438 REMARK 3 28 1.6990 - 1.6786 0.90 2627 126 0.2622 0.3392 REMARK 3 29 1.6786 - 1.6590 0.86 2411 135 0.2620 0.3263 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.10 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3011 17.9893 30.6855 REMARK 3 T TENSOR REMARK 3 T11: 0.4217 T22: 0.6493 REMARK 3 T33: 0.2639 T12: 0.0666 REMARK 3 T13: -0.1325 T23: 0.1671 REMARK 3 L TENSOR REMARK 3 L11: 2.5677 L22: 0.5681 REMARK 3 L33: 2.3871 L12: -0.2996 REMARK 3 L13: -0.0525 L23: 1.0735 REMARK 3 S TENSOR REMARK 3 S11: -0.2831 S12: -0.0755 S13: 0.8519 REMARK 3 S21: -0.2939 S22: 0.2689 S23: 0.1643 REMARK 3 S31: -0.9256 S32: -0.6505 S33: 0.2258 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0706 8.8663 30.9936 REMARK 3 T TENSOR REMARK 3 T11: 0.1949 T22: 0.4482 REMARK 3 T33: 0.0702 T12: -0.0796 REMARK 3 T13: -0.0910 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 0.4828 L22: 0.4888 REMARK 3 L33: 3.6630 L12: -0.0969 REMARK 3 L13: 0.0901 L23: -0.2324 REMARK 3 S TENSOR REMARK 3 S11: -0.1651 S12: 0.1742 S13: 0.0952 REMARK 3 S21: -0.2365 S22: 0.1558 S23: -0.1051 REMARK 3 S31: -0.1761 S32: 0.0550 S33: -0.0639 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3773 8.8582 49.5505 REMARK 3 T TENSOR REMARK 3 T11: 0.0572 T22: 0.3034 REMARK 3 T33: 0.1355 T12: 0.0188 REMARK 3 T13: 0.0051 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 1.1710 L22: 1.1608 REMARK 3 L33: 1.1525 L12: 0.2946 REMARK 3 L13: 0.2995 L23: 0.1793 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: -0.0187 S13: 0.1767 REMARK 3 S21: -0.0245 S22: 0.0367 S23: 0.2295 REMARK 3 S31: -0.0819 S32: -0.2698 S33: 0.0431 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6512 10.0383 45.1682 REMARK 3 T TENSOR REMARK 3 T11: 0.1608 T22: 0.3612 REMARK 3 T33: 0.1919 T12: -0.0076 REMARK 3 T13: 0.0086 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 2.3122 L22: 0.5098 REMARK 3 L33: 1.2510 L12: 1.0997 REMARK 3 L13: 1.2445 L23: 0.5196 REMARK 3 S TENSOR REMARK 3 S11: -0.2135 S12: 0.3273 S13: 0.0909 REMARK 3 S21: -0.0396 S22: 0.2550 S23: -0.2273 REMARK 3 S31: -0.2067 S32: 0.2880 S33: 0.0020 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3373 10.1109 60.9377 REMARK 3 T TENSOR REMARK 3 T11: 0.0893 T22: 0.2549 REMARK 3 T33: 0.1065 T12: -0.0005 REMARK 3 T13: -0.0038 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.7480 L22: 1.2347 REMARK 3 L33: 0.9052 L12: 1.1016 REMARK 3 L13: 0.6919 L23: 0.2730 REMARK 3 S TENSOR REMARK 3 S11: 0.0375 S12: -0.0871 S13: 0.0960 REMARK 3 S21: 0.1034 S22: -0.0591 S23: -0.0011 REMARK 3 S31: -0.0235 S32: 0.0691 S33: 0.0154 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4572 4.1005 29.0161 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.5277 REMARK 3 T33: 0.2153 T12: -0.0573 REMARK 3 T13: 0.0308 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.1441 L22: 1.2306 REMARK 3 L33: 1.1598 L12: -0.0788 REMARK 3 L13: 0.2979 L23: -0.8364 REMARK 3 S TENSOR REMARK 3 S11: -0.0571 S12: 0.2631 S13: 0.0949 REMARK 3 S21: -0.5351 S22: -0.0703 S23: -0.1929 REMARK 3 S31: 0.2656 S32: 0.5464 S33: 0.0553 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44257 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.659 REMARK 200 RESOLUTION RANGE LOW (A) : 43.811 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.02900 REMARK 200 R SYM (I) : 0.02900 REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.16200 REMARK 200 R SYM FOR SHELL (I) : 0.16200 REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3QYZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 2000, 0.1M MES PH 6.5, 0.1M REMARK 280 AMMONIUM SULFATE, 0.02M BETA-MERCAPTOETHANOL, 0.002M MAGNESIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.89500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ASP A 330 REMARK 465 MET A 331 REMARK 465 GLU A 332 REMARK 465 LEU A 333 REMARK 465 ASP A 334 REMARK 465 PRO A 354 REMARK 465 GLY A 355 REMARK 465 TYR A 356 REMARK 465 ARG A 357 REMARK 465 SER A 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 PHE A 329 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 335 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 13 44.69 18.99 REMARK 500 ASP A 147 42.37 -149.70 REMARK 500 ASP A 165 87.40 55.58 REMARK 500 ALA A 187 176.72 65.93 REMARK 500 ASN A 199 18.37 -161.94 REMARK 500 LEU A 292 48.20 -93.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A3N A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QYZ RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH ANOTHER ADENOSINE REMARK 900 DERIVATIVE REMARK 900 RELATED ID: 6FI3 RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH ANOTHER ADENOSINE REMARK 900 DERIVATIVE REMARK 900 RELATED ID: 6FI6 RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH ANOTHER ADENOSINE REMARK 900 DERIVATIVE DBREF 6FJ0 A 1 358 UNP P63086 MK01_RAT 1 358 SEQADV 6FJ0 HIS A -5 UNP P63086 EXPRESSION TAG SEQADV 6FJ0 HIS A -4 UNP P63086 EXPRESSION TAG SEQADV 6FJ0 HIS A -3 UNP P63086 EXPRESSION TAG SEQADV 6FJ0 HIS A -2 UNP P63086 EXPRESSION TAG SEQADV 6FJ0 HIS A -1 UNP P63086 EXPRESSION TAG SEQADV 6FJ0 HIS A 0 UNP P63086 EXPRESSION TAG SEQRES 1 A 364 HIS HIS HIS HIS HIS HIS MET ALA ALA ALA ALA ALA ALA SEQRES 2 A 364 GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY SEQRES 3 A 364 PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA SEQRES 4 A 364 TYR GLY MET VAL CYS SER ALA TYR ASP ASN LEU ASN LYS SEQRES 5 A 364 VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS SEQRES 6 A 364 GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE SEQRES 7 A 364 LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN SEQRES 8 A 364 ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP SEQRES 9 A 364 VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR SEQRES 10 A 364 LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE SEQRES 11 A 364 CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR SEQRES 12 A 364 ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 13 A 364 SER ASN LEU LEU LEU ASN THR THR CME ASP LEU LYS ILE SEQRES 14 A 364 CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS SEQRES 15 A 364 ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG SEQRES 16 A 364 TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY SEQRES 17 A 364 TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE SEQRES 18 A 364 LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY SEQRES 19 A 364 LYS HIS TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE SEQRES 20 A 364 LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE SEQRES 21 A 364 ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS SEQRES 22 A 364 LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA SEQRES 23 A 364 ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR SEQRES 24 A 364 PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU SEQRES 25 A 364 ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER ASP SEQRES 26 A 364 GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU SEQRES 27 A 364 LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE SEQRES 28 A 364 PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER MODRES 6FJ0 CME A 159 CYS MODIFIED RESIDUE HET CME A 159 10 HET DMS A 401 4 HET DMS A 402 4 HET DMS A 403 4 HET DMS A 404 4 HET SO4 A 405 5 HET A3N A 406 22 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM DMS DIMETHYL SULFOXIDE HETNAM SO4 SULFATE ION HETNAM A3N 5'-DEOXY-5'-(PROP-2-YN-1-YLAMINO)ADENOSINE FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 DMS 4(C2 H6 O S) FORMUL 6 SO4 O4 S 2- FORMUL 7 A3N C13 H16 N6 O3 FORMUL 8 HOH *330(H2 O) HELIX 1 AA1 HIS A 59 PHE A 76 1 18 HELIX 2 AA2 LEU A 110 GLN A 117 1 8 HELIX 3 AA3 SER A 120 ALA A 141 1 22 HELIX 4 AA4 LYS A 149 SER A 151 5 3 HELIX 5 AA5 ASP A 173 ASP A 177 5 5 HELIX 6 AA6 THR A 188 ARG A 192 5 5 HELIX 7 AA7 ALA A 193 ASN A 199 1 7 HELIX 8 AA8 LYS A 205 ASN A 222 1 18 HELIX 9 AA9 LEU A 232 GLY A 243 1 12 HELIX 10 AB1 SER A 246 CYS A 252 1 7 HELIX 11 AB2 ASN A 255 SER A 264 1 10 HELIX 12 AB3 PRO A 272 PHE A 277 1 6 HELIX 13 AB4 ASP A 281 LEU A 292 1 12 HELIX 14 AB5 GLU A 301 ALA A 307 1 7 HELIX 15 AB6 HIS A 308 GLU A 312 5 5 HELIX 16 AB7 ASP A 316 GLU A 320 5 5 HELIX 17 AB8 PRO A 337 THR A 349 1 13 HELIX 18 AB9 ALA A 350 GLN A 353 5 4 SHEET 1 AA1 2 MET A 11 VAL A 12 0 SHEET 2 AA1 2 GLN A 15 VAL A 16 -1 O GLN A 15 N VAL A 12 SHEET 1 AA2 5 TYR A 23 GLU A 31 0 SHEET 2 AA2 5 GLY A 35 ASP A 42 -1 O TYR A 41 N THR A 24 SHEET 3 AA2 5 VAL A 47 ILE A 54 -1 O VAL A 49 N ALA A 40 SHEET 4 AA2 5 VAL A 99 ASP A 104 -1 O VAL A 99 N ILE A 54 SHEET 5 AA2 5 ASP A 86 ILE A 88 -1 N ASP A 86 O VAL A 102 SHEET 1 AA3 3 THR A 108 ASP A 109 0 SHEET 2 AA3 3 LEU A 153 LEU A 155 -1 O LEU A 155 N THR A 108 SHEET 3 AA3 3 LEU A 161 ILE A 163 -1 O LYS A 162 N LEU A 154 SHEET 1 AA4 2 VAL A 143 LEU A 144 0 SHEET 2 AA4 2 ARG A 170 VAL A 171 -1 O ARG A 170 N LEU A 144 LINK C THR A 158 N CME A 159 1555 1555 1.33 LINK C CME A 159 N ASP A 160 1555 1555 1.33 SITE 1 AC1 2 LYS A 149 SER A 151 SITE 1 AC2 4 ASP A 122 HIS A 123 ARG A 259 TYR A 314 SITE 1 AC3 4 HIS A 297 LYS A 298 ARG A 299 GLN A 304 SITE 1 AC4 4 GLY A 32 ALA A 33 TYR A 34 GLY A 35 SITE 1 AC5 4 ARG A 189 ARG A 192 TYR A 231 HOH A 675 SITE 1 AC6 9 GLU A 31 VAL A 37 ALA A 50 GLN A 103 SITE 2 AC6 9 ASP A 104 MET A 106 ASP A 109 LYS A 112 SITE 3 AC6 9 HOH A 647 CRYST1 48.550 69.790 59.370 90.00 108.63 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020597 0.000000 0.006944 0.00000 SCALE2 0.000000 0.014329 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017775 0.00000