HEADER HYDROLASE 19-JAN-18 6FJ1 TITLE STRUCTURE OF THE LDTFM-AVIBACTAM CARBAMOYL ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: L,D-TRANSPEPTIDASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECIUM; SOURCE 3 ORGANISM_COMMON: STREPTOCOCCUS FAECIUM; SOURCE 4 ORGANISM_TAXID: 1352; SOURCE 5 GENE: CQR42_01530; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS L, D-TRANSPEPTIDATION, PEPTIDOGLYCAN, ANTIBIOTIC RESISTANCE, KEYWDS 2 AVIBACTAM, NXL104, ANTIBIOTIC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.LI DE LA SIERRA GALLAY,L.IANNAZZO,F.COMPAIN,M.FONVIELLE,H.VAN AUTHOR 2 TILBEURGH,Z.EDOO,M.ARTHUR,M.ETHEVE-QUELQUEJEU,J.HUGONNET REVDAT 3 07-FEB-24 6FJ1 1 REMARK REVDAT 2 21-JUN-23 6FJ1 1 JRNL HETSYN REVDAT 1 30-JAN-19 6FJ1 0 JRNL AUTH Z.EDOO,L.IANNAZZO,F.COMPAIN,I.LI DE LA SIERRA GALLAY, JRNL AUTH 2 H.VAN TILBEURGH,M.FONVIELLE,F.BOUCHET,E.LE RUN,J.L.MAINARDI, JRNL AUTH 3 M.ARTHUR,M.ETHEVE-QUELQUEJEU,J.E.HUGONNET JRNL TITL SYNTHESIS OF AVIBACTAM DERIVATIVES AND ACTIVITY ON JRNL TITL 2 BETA-LACTAMASES AND PEPTIDOGLYCAN BIOSYNTHESIS ENZYMES OF JRNL TITL 3 MYCOBACTERIA. JRNL REF CHEMISTRY V. 24 8081 2018 JRNL REFN ISSN 0947-6539 JRNL PMID 29601108 JRNL DOI 10.1002/CHEM.201800923 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 49437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2602 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5940 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 151 REMARK 3 SOLVENT ATOMS : 101 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.87000 REMARK 3 B22 (A**2) : 3.13000 REMARK 3 B33 (A**2) : -7.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.271 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.419 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6FJ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52058 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 48.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.410 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.39 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM NITRATE, PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 104.27000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.98500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 104.27000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 65.98500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 470 REMARK 465 HIS A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS B 470 REMARK 465 HIS B 471 REMARK 465 HIS B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 HIS C 470 REMARK 465 HIS C 471 REMARK 465 HIS C 472 REMARK 465 HIS C 473 REMARK 465 HIS C 474 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 292 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 292 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 MET B 250 CG - SD - CE ANGL. DEV. = 13.2 DEGREES REMARK 500 ASP B 261 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 292 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 350 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 MET C 250 CG - SD - CE ANGL. DEV. = 10.1 DEGREES REMARK 500 ASP C 257 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP C 350 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 238 25.84 49.00 REMARK 500 ASP A 263 99.06 -67.58 REMARK 500 THR A 335 -165.27 -160.85 REMARK 500 GLU A 343 -135.69 -119.68 REMARK 500 ASP A 361 45.36 37.88 REMARK 500 LEU A 366 147.72 -176.33 REMARK 500 ASP A 392 51.71 31.40 REMARK 500 ASN A 399 -71.63 -139.99 REMARK 500 PRO A 402 152.29 -27.02 REMARK 500 SER A 405 117.04 -165.01 REMARK 500 ASN B 238 26.57 49.80 REMARK 500 ASP B 263 99.74 -68.57 REMARK 500 THR B 335 -165.47 -160.80 REMARK 500 GLU B 343 -136.65 -120.66 REMARK 500 ASP B 361 45.30 37.88 REMARK 500 LEU B 366 144.87 -176.52 REMARK 500 ASP B 392 52.06 31.09 REMARK 500 ASN B 399 -73.42 -141.42 REMARK 500 THR B 401 -159.39 -156.87 REMARK 500 PRO B 402 151.55 -28.12 REMARK 500 SER B 405 116.07 -163.82 REMARK 500 ASN C 238 26.51 48.71 REMARK 500 ASP C 263 99.89 -66.85 REMARK 500 THR C 335 -167.28 -164.53 REMARK 500 GLU C 343 -137.47 -120.11 REMARK 500 ASP C 361 45.60 36.89 REMARK 500 LEU C 366 144.04 -176.01 REMARK 500 THR C 368 151.25 179.88 REMARK 500 ASP C 392 52.02 31.69 REMARK 500 ASN C 399 -71.34 -139.76 REMARK 500 PRO C 402 152.48 -25.46 REMARK 500 SER C 405 116.80 -166.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P3G A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NXL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P3G B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P3G C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide NXL B 501 and CYS B REMARK 800 442 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide NXL C 501 and CYS C REMARK 800 442 DBREF1 6FJ1 A 218 466 UNP A0A2D0BNR1_ENTFC DBREF2 6FJ1 A A0A2D0BNR1 216 466 DBREF1 6FJ1 B 218 466 UNP A0A2D0BNR1_ENTFC DBREF2 6FJ1 B A0A2D0BNR1 216 466 DBREF1 6FJ1 C 218 466 UNP A0A2D0BNR1_ENTFC DBREF2 6FJ1 C A0A2D0BNR1 216 466 SEQADV 6FJ1 GLY A 217 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 A UNP A0A2D0BNR ASP 398 DELETION SEQADV 6FJ1 A UNP A0A2D0BNR ASP 399 DELETION SEQADV 6FJ1 GLY A 467 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 SER A 468 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 469 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 470 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 471 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 472 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 473 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS A 474 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 GLY B 217 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 B UNP A0A2D0BNR ASP 398 DELETION SEQADV 6FJ1 B UNP A0A2D0BNR ASP 399 DELETION SEQADV 6FJ1 GLY B 467 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 SER B 468 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 469 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 470 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 471 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 472 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 473 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS B 474 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 GLY C 217 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 C UNP A0A2D0BNR ASP 398 DELETION SEQADV 6FJ1 C UNP A0A2D0BNR ASP 399 DELETION SEQADV 6FJ1 GLY C 467 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 SER C 468 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 469 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 470 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 471 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 472 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 473 UNP A0A2D0BNR EXPRESSION TAG SEQADV 6FJ1 HIS C 474 UNP A0A2D0BNR EXPRESSION TAG SEQRES 1 A 258 GLY LEU LYS GLU GLN LEU ALA SER MET ASN ALA ILE ALA SEQRES 2 A 258 ASN VAL LYS ALA THR TYR SER ILE ASN GLY GLU THR PHE SEQRES 3 A 258 GLN ILE PRO SER SER ASP ILE MET SER TRP LEU THR TYR SEQRES 4 A 258 ASN ASP GLY LYS VAL ASP LEU ASP THR GLU GLN VAL ARG SEQRES 5 A 258 GLN TYR VAL THR ASP LEU GLY THR LYS TYR ASN THR SER SEQRES 6 A 258 THR ASN ASP THR LYS PHE LYS SER THR LYS ARG GLY GLU SEQRES 7 A 258 VAL THR VAL PRO VAL GLY THR TYR SER TRP THR ILE GLN SEQRES 8 A 258 THR ASP SER GLU THR GLU ALA LEU LYS LYS ALA ILE LEU SEQRES 9 A 258 ALA GLY GLN ASP PHE THR ARG SER PRO ILE VAL GLN GLY SEQRES 10 A 258 GLY THR THR ALA ASP HIS PRO LEU ILE GLU ASP THR TYR SEQRES 11 A 258 ILE GLU VAL ASP LEU GLU ASN GLN HIS MET TRP TYR TYR SEQRES 12 A 258 LYS ASP GLY LYS VAL ALA LEU GLU THR ASP ILE VAL SER SEQRES 13 A 258 GLY LYS PRO THR THR PRO THR PRO ALA GLY VAL PHE TYR SEQRES 14 A 258 VAL TRP ASN LYS GLU GLU ASP ALA THR LEU LYS GLY THR SEQRES 15 A 258 ASN GLY THR PRO TYR GLU SER PRO VAL ASN TYR TRP MET SEQRES 16 A 258 PRO ILE ASP TRP THR GLY VAL GLY ILE HIS ASP SER ASP SEQRES 17 A 258 TRP GLN PRO GLU TYR GLY GLY ASP LEU TRP LYS THR ARG SEQRES 18 A 258 GLY SER HIS GLY CYS ILE ASN THR PRO PRO SER VAL MET SEQRES 19 A 258 LYS GLU LEU PHE GLY MET VAL GLU LYS GLY THR PRO VAL SEQRES 20 A 258 LEU VAL PHE GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 258 GLY LEU LYS GLU GLN LEU ALA SER MET ASN ALA ILE ALA SEQRES 2 B 258 ASN VAL LYS ALA THR TYR SER ILE ASN GLY GLU THR PHE SEQRES 3 B 258 GLN ILE PRO SER SER ASP ILE MET SER TRP LEU THR TYR SEQRES 4 B 258 ASN ASP GLY LYS VAL ASP LEU ASP THR GLU GLN VAL ARG SEQRES 5 B 258 GLN TYR VAL THR ASP LEU GLY THR LYS TYR ASN THR SER SEQRES 6 B 258 THR ASN ASP THR LYS PHE LYS SER THR LYS ARG GLY GLU SEQRES 7 B 258 VAL THR VAL PRO VAL GLY THR TYR SER TRP THR ILE GLN SEQRES 8 B 258 THR ASP SER GLU THR GLU ALA LEU LYS LYS ALA ILE LEU SEQRES 9 B 258 ALA GLY GLN ASP PHE THR ARG SER PRO ILE VAL GLN GLY SEQRES 10 B 258 GLY THR THR ALA ASP HIS PRO LEU ILE GLU ASP THR TYR SEQRES 11 B 258 ILE GLU VAL ASP LEU GLU ASN GLN HIS MET TRP TYR TYR SEQRES 12 B 258 LYS ASP GLY LYS VAL ALA LEU GLU THR ASP ILE VAL SER SEQRES 13 B 258 GLY LYS PRO THR THR PRO THR PRO ALA GLY VAL PHE TYR SEQRES 14 B 258 VAL TRP ASN LYS GLU GLU ASP ALA THR LEU LYS GLY THR SEQRES 15 B 258 ASN GLY THR PRO TYR GLU SER PRO VAL ASN TYR TRP MET SEQRES 16 B 258 PRO ILE ASP TRP THR GLY VAL GLY ILE HIS ASP SER ASP SEQRES 17 B 258 TRP GLN PRO GLU TYR GLY GLY ASP LEU TRP LYS THR ARG SEQRES 18 B 258 GLY SER HIS GLY CYS ILE ASN THR PRO PRO SER VAL MET SEQRES 19 B 258 LYS GLU LEU PHE GLY MET VAL GLU LYS GLY THR PRO VAL SEQRES 20 B 258 LEU VAL PHE GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 C 258 GLY LEU LYS GLU GLN LEU ALA SER MET ASN ALA ILE ALA SEQRES 2 C 258 ASN VAL LYS ALA THR TYR SER ILE ASN GLY GLU THR PHE SEQRES 3 C 258 GLN ILE PRO SER SER ASP ILE MET SER TRP LEU THR TYR SEQRES 4 C 258 ASN ASP GLY LYS VAL ASP LEU ASP THR GLU GLN VAL ARG SEQRES 5 C 258 GLN TYR VAL THR ASP LEU GLY THR LYS TYR ASN THR SER SEQRES 6 C 258 THR ASN ASP THR LYS PHE LYS SER THR LYS ARG GLY GLU SEQRES 7 C 258 VAL THR VAL PRO VAL GLY THR TYR SER TRP THR ILE GLN SEQRES 8 C 258 THR ASP SER GLU THR GLU ALA LEU LYS LYS ALA ILE LEU SEQRES 9 C 258 ALA GLY GLN ASP PHE THR ARG SER PRO ILE VAL GLN GLY SEQRES 10 C 258 GLY THR THR ALA ASP HIS PRO LEU ILE GLU ASP THR TYR SEQRES 11 C 258 ILE GLU VAL ASP LEU GLU ASN GLN HIS MET TRP TYR TYR SEQRES 12 C 258 LYS ASP GLY LYS VAL ALA LEU GLU THR ASP ILE VAL SER SEQRES 13 C 258 GLY LYS PRO THR THR PRO THR PRO ALA GLY VAL PHE TYR SEQRES 14 C 258 VAL TRP ASN LYS GLU GLU ASP ALA THR LEU LYS GLY THR SEQRES 15 C 258 ASN GLY THR PRO TYR GLU SER PRO VAL ASN TYR TRP MET SEQRES 16 C 258 PRO ILE ASP TRP THR GLY VAL GLY ILE HIS ASP SER ASP SEQRES 17 C 258 TRP GLN PRO GLU TYR GLY GLY ASP LEU TRP LYS THR ARG SEQRES 18 C 258 GLY SER HIS GLY CYS ILE ASN THR PRO PRO SER VAL MET SEQRES 19 C 258 LYS GLU LEU PHE GLY MET VAL GLU LYS GLY THR PRO VAL SEQRES 20 C 258 LEU VAL PHE GLY SER HIS HIS HIS HIS HIS HIS HET P3G A 501 17 HET NXL A 502 17 HET GOL A 503 6 HET GOL A 504 6 HET CL A 505 1 HET NXL B 501 17 HET P3G B 502 17 HET GOL B 503 6 HET GOL B 504 6 HET GOL B 505 6 HET GOL B 506 6 HET NXL C 501 17 HET P3G C 502 17 HET GOL C 503 6 HET GOL C 504 6 HETNAM P3G 3,6,9,12,15-PENTAOXAHEPTADECANE HETNAM NXL (2S,5R)-1-FORMYL-5-[(SULFOOXY)AMINO]PIPERIDINE-2- HETNAM 2 NXL CARBOXAMIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN NXL AVIBACTAM, BOUND FORM; NXL104, BOUND FORM HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 P3G 3(C12 H26 O5) FORMUL 5 NXL 3(C7 H13 N3 O6 S) FORMUL 6 GOL 8(C3 H8 O3) FORMUL 8 CL CL 1- FORMUL 19 HOH *101(H2 O) HELIX 1 AA1 GLY A 217 ASN A 230 1 14 HELIX 2 AA2 PRO A 245 TRP A 252 1 8 HELIX 3 AA3 ASP A 263 ASN A 279 1 17 HELIX 4 AA4 GLN A 307 ALA A 321 1 15 HELIX 5 AA5 LEU A 433 GLY A 438 1 6 HELIX 6 AA6 PRO A 446 VAL A 457 1 12 HELIX 7 AA7 LEU B 218 ASN B 230 1 13 HELIX 8 AA8 PRO B 245 TRP B 252 1 8 HELIX 9 AA9 ASP B 263 ASN B 279 1 17 HELIX 10 AB1 GLN B 307 ALA B 321 1 15 HELIX 11 AB2 LEU B 433 GLY B 438 1 6 HELIX 12 AB3 PRO B 446 VAL B 457 1 12 HELIX 13 AB4 LEU C 218 ASN C 230 1 13 HELIX 14 AB5 PRO C 245 TRP C 252 1 8 HELIX 15 AB6 ASP C 263 ASN C 279 1 17 HELIX 16 AB7 GLN C 307 ALA C 321 1 15 HELIX 17 AB8 LEU C 433 GLY C 438 1 6 HELIX 18 AB9 PRO C 446 VAL C 457 1 12 SHEET 1 AA1 3 GLU A 240 ILE A 244 0 SHEET 2 AA1 3 ALA A 233 ILE A 237 -1 N ALA A 233 O ILE A 244 SHEET 3 AA1 3 PHE A 325 ARG A 327 1 O ARG A 327 N SER A 236 SHEET 1 AA2 2 LEU A 253 ASN A 256 0 SHEET 2 AA2 2 LYS A 259 LEU A 262 -1 O LYS A 259 N ASN A 256 SHEET 1 AA3 2 THR A 285 LYS A 288 0 SHEET 2 AA3 2 GLU A 294 VAL A 297 -1 O VAL A 297 N THR A 285 SHEET 1 AA4 2 TRP A 304 ILE A 306 0 SHEET 2 AA4 2 VAL A 331 GLY A 333 -1 O GLN A 332 N THR A 305 SHEET 1 AA5 5 LYS A 363 ASP A 369 0 SHEET 2 AA5 5 HIS A 355 LYS A 360 -1 N TYR A 358 O ALA A 365 SHEET 3 AA5 5 TYR A 346 ASP A 350 -1 N TYR A 346 O TYR A 359 SHEET 4 AA5 5 PRO A 462 PHE A 466 1 O LEU A 464 N VAL A 349 SHEET 5 AA5 5 GLY A 382 TYR A 385 -1 N PHE A 384 O VAL A 463 SHEET 1 AA6 4 GLU A 390 GLY A 397 0 SHEET 2 AA6 4 TYR A 403 PRO A 412 -1 O SER A 405 N LEU A 395 SHEET 3 AA6 4 GLY A 419 ASP A 422 -1 O ILE A 420 N MET A 411 SHEET 4 AA6 4 ILE A 443 THR A 445 1 O ILE A 443 N GLY A 419 SHEET 1 AA7 3 GLU B 240 GLN B 243 0 SHEET 2 AA7 3 ALA B 233 ILE B 237 -1 N TYR B 235 O PHE B 242 SHEET 3 AA7 3 PHE B 325 ARG B 327 1 O ARG B 327 N SER B 236 SHEET 1 AA8 2 LEU B 253 ASN B 256 0 SHEET 2 AA8 2 LYS B 259 LEU B 262 -1 O LYS B 259 N ASN B 256 SHEET 1 AA9 2 THR B 285 LYS B 288 0 SHEET 2 AA9 2 GLU B 294 VAL B 297 -1 O VAL B 297 N THR B 285 SHEET 1 AB1 2 TRP B 304 ILE B 306 0 SHEET 2 AB1 2 VAL B 331 GLY B 333 -1 O GLN B 332 N THR B 305 SHEET 1 AB2 5 LYS B 363 ASP B 369 0 SHEET 2 AB2 5 HIS B 355 LYS B 360 -1 N TYR B 358 O ALA B 365 SHEET 3 AB2 5 TYR B 346 ASP B 350 -1 N TYR B 346 O TYR B 359 SHEET 4 AB2 5 PRO B 462 PHE B 466 1 O LEU B 464 N VAL B 349 SHEET 5 AB2 5 GLY B 382 TYR B 385 -1 N PHE B 384 O VAL B 463 SHEET 1 AB3 4 GLU B 390 GLY B 397 0 SHEET 2 AB3 4 TYR B 403 PRO B 412 -1 O SER B 405 N LEU B 395 SHEET 3 AB3 4 GLY B 419 ASP B 422 -1 O ILE B 420 N MET B 411 SHEET 4 AB3 4 ILE B 443 THR B 445 1 O ILE B 443 N GLY B 419 SHEET 1 AB4 3 GLU C 240 ILE C 244 0 SHEET 2 AB4 3 ALA C 233 ILE C 237 -1 N ALA C 233 O ILE C 244 SHEET 3 AB4 3 PHE C 325 ARG C 327 1 O ARG C 327 N SER C 236 SHEET 1 AB5 2 LEU C 253 ASN C 256 0 SHEET 2 AB5 2 LYS C 259 LEU C 262 -1 O LYS C 259 N ASN C 256 SHEET 1 AB6 2 THR C 285 LYS C 288 0 SHEET 2 AB6 2 GLU C 294 VAL C 297 -1 O VAL C 297 N THR C 285 SHEET 1 AB7 2 TRP C 304 ILE C 306 0 SHEET 2 AB7 2 VAL C 331 GLY C 333 -1 O GLN C 332 N THR C 305 SHEET 1 AB8 5 LYS C 363 ASP C 369 0 SHEET 2 AB8 5 HIS C 355 LYS C 360 -1 N TYR C 358 O ALA C 365 SHEET 3 AB8 5 TYR C 346 ASP C 350 -1 N TYR C 346 O TYR C 359 SHEET 4 AB8 5 PRO C 462 PHE C 466 1 O LEU C 464 N VAL C 349 SHEET 5 AB8 5 GLY C 382 TYR C 385 -1 N PHE C 384 O VAL C 463 SHEET 1 AB9 4 GLU C 390 GLY C 397 0 SHEET 2 AB9 4 TYR C 403 PRO C 412 -1 O SER C 405 N LEU C 395 SHEET 3 AB9 4 GLY C 419 ASP C 422 -1 O ILE C 420 N MET C 411 SHEET 4 AB9 4 ILE C 443 THR C 445 1 O ILE C 443 N GLY C 419 LINK SG CYS A 442 CAN NXL A 502 1555 1555 1.65 LINK SG CYS B 442 CAN NXL B 501 1555 1555 1.63 LINK SG CYS C 442 CAN NXL C 501 1555 1555 1.62 SITE 1 AC1 5 TYR A 270 LEU A 274 LYS A 277 TRP B 387 SITE 2 AC1 5 TRP B 415 SITE 1 AC2 12 LEU A 395 LYS A 396 TYR A 403 SER A 405 SITE 2 AC2 12 GLY A 417 HIS A 421 TRP A 425 SER A 439 SITE 3 AC2 12 HIS A 440 GLY A 441 CYS A 442 ASN A 444 SITE 1 AC3 5 ASN A 283 ASP A 284 LYS A 286 THR A 296 SITE 2 AC3 5 HOH A 610 SITE 1 AC4 4 SER A 224 ALA A 227 LEU A 320 ALA A 321 SITE 1 AC5 1 P3G C 502 SITE 1 AC6 4 ASP B 273 LYS B 277 TYR C 385 TRP C 415 SITE 1 AC7 2 GLY B 300 TRP B 415 SITE 1 AC8 4 PHE B 287 LYS B 288 GLU B 343 HOH B 615 SITE 1 AC9 4 GLU B 352 TRP B 434 SER B 468 HOH B 635 SITE 1 AD1 4 SER B 224 ALA B 227 LEU B 320 ALA B 321 SITE 1 AD2 3 CL A 505 TYR C 270 LYS C 277 SITE 1 AD3 3 SER C 224 LEU C 320 ALA C 321 SITE 1 AD4 3 PHE C 287 LYS C 288 GLU C 343 SITE 1 AD5 13 VAL B 371 LYS B 396 TYR B 403 SER B 405 SITE 2 AD5 13 GLY B 417 GLY B 419 HIS B 421 TRP B 425 SITE 3 AD5 13 SER B 439 HIS B 440 GLY B 441 ILE B 443 SITE 4 AD5 13 ASN B 444 SITE 1 AD6 14 VAL C 371 LEU C 395 LYS C 396 TYR C 403 SITE 2 AD6 14 SER C 405 GLY C 417 GLY C 419 HIS C 421 SITE 3 AD6 14 TRP C 425 SER C 439 HIS C 440 GLY C 441 SITE 4 AD6 14 ILE C 443 ASN C 444 CRYST1 208.540 131.970 70.090 90.00 90.14 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004795 0.000000 0.000012 0.00000 SCALE2 0.000000 0.007577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014267 0.00000