HEADER BIOSYNTHETIC PROTEIN 24-JAN-18 6FKO TITLE DEOXYGUANYLOSUCCINATE SYNTHASE (DGSS) QUATERNARY STRUCTURE WITH ATP, TITLE 2 DGMP, HADACIDIN AT 2.1 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLOSUCCINATE SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO PHAGE PHIVC8; SOURCE 3 ORGANISM_TAXID: 1076759; SOURCE 4 GENE: PHIVC8_P27; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 2, 6-DIAMINOPURINE, PHAGE PHIVC8, SYNTHETASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.SLEIMAN,J.LOC'H,A.HAOUZ,P.A.KAMINSKI REVDAT 2 08-MAY-24 6FKO 1 REMARK REVDAT 1 26-JUN-19 6FKO 0 SPRSDE 26-JUN-19 6FKO 6FJR JRNL AUTH D.SLEIMAN,J.LOC'H,A.HAOUZ,P.A.KAMINSKI JRNL TITL DEOXYGUANYLOSUCCINATE SYNTHASE (DGSS) QUATERNARY STRUCTURE JRNL TITL 2 WITH ATP, DGMP, HADACIDIN AT 2.1 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 49060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2453 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3535 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2724 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3359 REMARK 3 BIN R VALUE (WORKING SET) : 0.2718 REMARK 3 BIN FREE R VALUE : 0.2839 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.98 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 176 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5267 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 129 REMARK 3 SOLVENT ATOMS : 532 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.87160 REMARK 3 B22 (A**2) : -3.87160 REMARK 3 B33 (A**2) : 7.74310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.212 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.168 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.191 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.161 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5512 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7505 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1890 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 140 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 853 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5512 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 723 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6506 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.23 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 8.6381 32.1301 7.6619 REMARK 3 T TENSOR REMARK 3 T11: -0.0601 T22: -0.0647 REMARK 3 T33: 0.0221 T12: 0.0005 REMARK 3 T13: -0.0062 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.3091 L22: 0.3784 REMARK 3 L33: 0.8867 L12: 0.0084 REMARK 3 L13: -0.0650 L23: 0.3464 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0067 S13: -0.0284 REMARK 3 S21: 0.0515 S22: -0.0394 S23: 0.0355 REMARK 3 S31: 0.1156 S32: 0.0018 S33: 0.0353 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 2.4079 61.4593 2.5229 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: -0.1143 REMARK 3 T33: -0.0172 T12: 0.0573 REMARK 3 T13: -0.0263 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.4149 L22: 0.4820 REMARK 3 L33: 1.5354 L12: 0.0168 REMARK 3 L13: 0.2362 L23: 0.3152 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: 0.0077 S13: 0.0816 REMARK 3 S21: -0.0803 S22: -0.0432 S23: 0.0368 REMARK 3 S31: -0.4733 S32: -0.1460 S33: 0.0914 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FKO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008499. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980097 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49180 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.106 REMARK 200 RESOLUTION RANGE LOW (A) : 48.188 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.910 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)2SO4 0.1 M NA3 CIT 5.6 PH REMARK 280 25 %W/V PEG 4K, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.37500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.98500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.98500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.18750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.98500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.98500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 144.56250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.98500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.98500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 48.18750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.98500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.98500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 144.56250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 96.37500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 96 CG OD1 OD2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 MET A 302 CG SD CE REMARK 470 GLU B 49 CG CD OE1 OE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 GLU B 179 CG CD OE1 OE2 REMARK 470 GLU B 248 CG CD OE1 OE2 REMARK 470 GLU B 253 CG CD OE1 OE2 REMARK 470 VAL B 258 CG1 CG2 REMARK 470 THR B 262 OG1 CG2 REMARK 470 VAL B 264 CG1 CG2 REMARK 470 LYS B 266 CG CD CE NZ REMARK 470 LYS B 267 CG CD CE NZ REMARK 470 MET B 302 CG SD CE REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 87.43 -68.01 REMARK 500 GLN A 11 -125.19 -126.23 REMARK 500 ALA A 36 60.91 -151.01 REMARK 500 ASN A 47 -169.98 -78.19 REMARK 500 VAL A 57 -70.31 -114.45 REMARK 500 LEU A 94 54.49 -96.49 REMARK 500 GLN A 187 -135.16 61.64 REMARK 500 CYS A 206 65.55 -115.93 REMARK 500 ASN A 223 -62.35 -96.86 REMARK 500 GLU B 2 88.33 -69.18 REMARK 500 GLN B 11 -125.78 -125.66 REMARK 500 ALA B 36 57.14 -155.15 REMARK 500 PRO B 39 0.05 -68.75 REMARK 500 LYS B 68 -36.95 -130.33 REMARK 500 LEU B 94 55.47 -96.59 REMARK 500 GLN B 187 -134.53 60.10 REMARK 500 CYS B 206 64.18 -113.36 REMARK 500 THR B 265 -132.05 -97.51 REMARK 500 LYS B 266 -3.38 -157.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 780 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A 781 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH A 782 DISTANCE = 9.31 ANGSTROMS REMARK 525 HOH A 783 DISTANCE = 10.98 ANGSTROMS REMARK 525 HOH B 748 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 749 DISTANCE = 7.42 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HDA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DGP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DGP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FJR RELATED DB: PDB DBREF 6FKO A 3 343 UNP G3FFN6 G3FFN6_9CAUD 3 343 DBREF 6FKO B 3 343 UNP G3FFN6 G3FFN6_9CAUD 3 343 SEQADV 6FKO MET A -19 UNP G3FFN6 INITIATING METHIONINE SEQADV 6FKO GLY A -18 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER A -17 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER A -16 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -15 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -14 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -13 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -12 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -11 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A -10 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER A -9 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER A -8 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLY A -7 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO LEU A -6 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO VAL A -5 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO PRO A -4 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO ARG A -3 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLY A -2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER A -1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS A 0 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO MET A 1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLU A 2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO MET B -19 UNP G3FFN6 INITIATING METHIONINE SEQADV 6FKO GLY B -18 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER B -17 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER B -16 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -15 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -14 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -13 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -12 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -11 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B -10 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER B -9 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER B -8 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLY B -7 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO LEU B -6 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO VAL B -5 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO PRO B -4 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO ARG B -3 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLY B -2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO SER B -1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO HIS B 0 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO MET B 1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FKO GLU B 2 UNP G3FFN6 EXPRESSION TAG SEQRES 1 A 363 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 363 LEU VAL PRO ARG GLY SER HIS MET GLU ASN VAL ASP LEU SEQRES 3 A 363 VAL ILE ASP LEU GLN PHE GLY SER THR GLY LYS GLY LEU SEQRES 4 A 363 ILE ALA GLY TYR LEU ALA GLU LYS ASN GLY TYR ASP THR SEQRES 5 A 363 VAL ILE ASN ALA ASN MET PRO ASN ALA GLY HIS THR TYR SEQRES 6 A 363 ILE ASN ALA GLU GLY ARG LYS TRP MET HIS LYS VAL LEU SEQRES 7 A 363 PRO ASN GLY ILE VAL SER PRO ASN LEU LYS ARG VAL MET SEQRES 8 A 363 LEU GLY ALA GLY SER VAL PHE SER ILE ASN ARG LEU MET SEQRES 9 A 363 GLU GLU ILE GLU MET SER LYS ASP LEU LEU HIS ASP LYS SEQRES 10 A 363 VAL ALA ILE LEU ILE HIS PRO MET ALA THR VAL LEU ASP SEQRES 11 A 363 GLU GLU ALA HIS LYS LYS ALA GLU VAL GLY ILE ALA THR SEQRES 12 A 363 SER ILE GLY SER THR GLY GLN GLY SER MET ALA ALA MET SEQRES 13 A 363 VAL GLU LYS LEU GLN ARG ASP PRO THR ASN ASN THR ILE SEQRES 14 A 363 VAL ALA ARG ASP VAL ALA GLN TYR ASP GLY ARG ILE ALA SEQRES 15 A 363 GLN TYR VAL CYS THR VAL GLU GLU TRP ASP MET ALA LEU SEQRES 16 A 363 MET ALA SER GLU ARG ILE LEU ALA GLU GLY ALA GLN GLY SEQRES 17 A 363 PHE SER LEU SER LEU ASN GLN GLU PHE TYR PRO TYR CYS SEQRES 18 A 363 THR SER ARG ASP CYS THR PRO ALA ARG PHE LEU ALA ASP SEQRES 19 A 363 MET GLY ILE PRO LEU PRO MET LEU ASN LYS VAL ILE GLY SEQRES 20 A 363 THR ALA ARG CYS HIS PRO ILE ARG VAL GLY GLY THR SER SEQRES 21 A 363 GLY GLY HIS TYR PRO ASP GLN GLU GLU LEU THR TRP GLU SEQRES 22 A 363 GLN LEU GLY GLN VAL PRO GLU LEU THR THR VAL THR LYS SEQRES 23 A 363 LYS VAL ARG ARG VAL PHE SER PHE SER PHE ILE GLN MET SEQRES 24 A 363 GLN LYS ALA MET TRP THR CYS GLN PRO ASP GLU VAL PHE SEQRES 25 A 363 LEU ASN PHE CYS ASN TYR LEU SER PRO MET GLY TRP GLN SEQRES 26 A 363 ASP ILE VAL HIS GLN ILE GLU VAL ALA ALA GLN SER ARG SEQRES 27 A 363 TYR CYS ASP ALA GLU VAL LYS TYR LEU GLY PHE GLY PRO SEQRES 28 A 363 THR PHE ASN ASP VAL GLU LEU ARG GLU ASP VAL MET SEQRES 1 B 363 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 363 LEU VAL PRO ARG GLY SER HIS MET GLU ASN VAL ASP LEU SEQRES 3 B 363 VAL ILE ASP LEU GLN PHE GLY SER THR GLY LYS GLY LEU SEQRES 4 B 363 ILE ALA GLY TYR LEU ALA GLU LYS ASN GLY TYR ASP THR SEQRES 5 B 363 VAL ILE ASN ALA ASN MET PRO ASN ALA GLY HIS THR TYR SEQRES 6 B 363 ILE ASN ALA GLU GLY ARG LYS TRP MET HIS LYS VAL LEU SEQRES 7 B 363 PRO ASN GLY ILE VAL SER PRO ASN LEU LYS ARG VAL MET SEQRES 8 B 363 LEU GLY ALA GLY SER VAL PHE SER ILE ASN ARG LEU MET SEQRES 9 B 363 GLU GLU ILE GLU MET SER LYS ASP LEU LEU HIS ASP LYS SEQRES 10 B 363 VAL ALA ILE LEU ILE HIS PRO MET ALA THR VAL LEU ASP SEQRES 11 B 363 GLU GLU ALA HIS LYS LYS ALA GLU VAL GLY ILE ALA THR SEQRES 12 B 363 SER ILE GLY SER THR GLY GLN GLY SER MET ALA ALA MET SEQRES 13 B 363 VAL GLU LYS LEU GLN ARG ASP PRO THR ASN ASN THR ILE SEQRES 14 B 363 VAL ALA ARG ASP VAL ALA GLN TYR ASP GLY ARG ILE ALA SEQRES 15 B 363 GLN TYR VAL CYS THR VAL GLU GLU TRP ASP MET ALA LEU SEQRES 16 B 363 MET ALA SER GLU ARG ILE LEU ALA GLU GLY ALA GLN GLY SEQRES 17 B 363 PHE SER LEU SER LEU ASN GLN GLU PHE TYR PRO TYR CYS SEQRES 18 B 363 THR SER ARG ASP CYS THR PRO ALA ARG PHE LEU ALA ASP SEQRES 19 B 363 MET GLY ILE PRO LEU PRO MET LEU ASN LYS VAL ILE GLY SEQRES 20 B 363 THR ALA ARG CYS HIS PRO ILE ARG VAL GLY GLY THR SER SEQRES 21 B 363 GLY GLY HIS TYR PRO ASP GLN GLU GLU LEU THR TRP GLU SEQRES 22 B 363 GLN LEU GLY GLN VAL PRO GLU LEU THR THR VAL THR LYS SEQRES 23 B 363 LYS VAL ARG ARG VAL PHE SER PHE SER PHE ILE GLN MET SEQRES 24 B 363 GLN LYS ALA MET TRP THR CYS GLN PRO ASP GLU VAL PHE SEQRES 25 B 363 LEU ASN PHE CYS ASN TYR LEU SER PRO MET GLY TRP GLN SEQRES 26 B 363 ASP ILE VAL HIS GLN ILE GLU VAL ALA ALA GLN SER ARG SEQRES 27 B 363 TYR CYS ASP ALA GLU VAL LYS TYR LEU GLY PHE GLY PRO SEQRES 28 B 363 THR PHE ASN ASP VAL GLU LEU ARG GLU ASP VAL MET HET HDA A 401 8 HET DGP A 402 23 HET FLC A 403 13 HET ATP A 404 31 HET DGP B 401 23 HET ATP B 402 31 HETNAM HDA HADACIDIN HETNAM DGP 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE HETNAM FLC CITRATE ANION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 HDA C3 H5 N O4 FORMUL 4 DGP 2(C10 H14 N5 O7 P) FORMUL 5 FLC C6 H5 O7 3- FORMUL 6 ATP 2(C10 H16 N5 O13 P3) FORMUL 9 HOH *532(H2 O) HELIX 1 AA1 GLY A 16 GLY A 29 1 14 HELIX 2 AA2 PRO A 59 SER A 64 5 6 HELIX 3 AA3 SER A 79 SER A 90 1 12 HELIX 4 AA4 ASP A 110 GLU A 118 1 9 HELIX 5 AA5 GLU A 118 ILE A 125 1 8 HELIX 6 AA6 GLY A 131 GLN A 141 1 11 HELIX 7 AA7 VAL A 150 ALA A 155 1 6 HELIX 8 AA8 THR A 167 SER A 178 1 12 HELIX 9 AA9 GLY A 188 SER A 192 5 5 HELIX 10 AB1 THR A 207 MET A 215 1 9 HELIX 11 AB2 PRO A 218 PRO A 220 5 3 HELIX 12 AB3 THR A 251 GLY A 256 1 6 HELIX 13 AB4 SER A 275 GLN A 287 1 13 HELIX 14 AB5 PHE A 295 LEU A 299 5 5 HELIX 15 AB6 SER A 300 ARG A 318 1 19 HELIX 16 AB7 THR A 332 ASN A 334 5 3 HELIX 17 AB8 ARG A 339 MET A 343 1 5 HELIX 18 AB9 GLY B 16 GLY B 29 1 14 HELIX 19 AC1 PRO B 59 SER B 64 5 6 HELIX 20 AC2 SER B 79 SER B 90 1 12 HELIX 21 AC3 GLU B 112 GLU B 118 1 7 HELIX 22 AC4 GLU B 118 ILE B 125 1 8 HELIX 23 AC5 GLY B 131 GLN B 141 1 11 HELIX 24 AC6 VAL B 150 ALA B 155 1 6 HELIX 25 AC7 THR B 167 SER B 178 1 12 HELIX 26 AC8 GLY B 188 SER B 192 5 5 HELIX 27 AC9 THR B 207 MET B 215 1 9 HELIX 28 AD1 PRO B 218 PRO B 220 5 3 HELIX 29 AD2 THR B 251 GLY B 256 1 6 HELIX 30 AD3 SER B 275 GLN B 287 1 13 HELIX 31 AD4 PHE B 295 LEU B 299 5 5 HELIX 32 AD5 SER B 300 ARG B 318 1 19 HELIX 33 AD6 THR B 332 ASN B 334 5 3 HELIX 34 AD7 ARG B 339 MET B 343 1 5 SHEET 1 AA1 9 ALA A 99 ILE A 102 0 SHEET 2 AA1 9 ARG A 69 LEU A 72 1 N VAL A 70 O LEU A 101 SHEET 3 AA1 9 THR A 32 ASN A 35 1 N VAL A 33 O MET A 71 SHEET 4 AA1 9 ILE A 181 GLU A 184 1 O GLU A 184 N ILE A 34 SHEET 5 AA1 9 VAL A 4 ASP A 9 1 N ASP A 5 O ILE A 181 SHEET 6 AA1 9 LEU A 222 ARG A 230 1 O ILE A 226 N LEU A 6 SHEET 7 AA1 9 GLU A 290 ASN A 294 1 O ASN A 294 N ALA A 229 SHEET 8 AA1 9 GLU A 323 GLY A 328 1 O TYR A 326 N LEU A 293 SHEET 9 AA1 9 VAL A 336 LEU A 338 -1 O GLU A 337 N LEU A 327 SHEET 1 AA2 2 HIS A 43 ILE A 46 0 SHEET 2 AA2 2 LYS A 52 HIS A 55 -1 O HIS A 55 N HIS A 43 SHEET 1 AA3 2 VAL A 77 PHE A 78 0 SHEET 2 AA3 2 THR A 107 VAL A 108 1 O THR A 107 N PHE A 78 SHEET 1 AA4 3 ILE A 234 ARG A 235 0 SHEET 2 AA4 3 ARG A 270 PHE A 272 -1 O ARG A 270 N ARG A 235 SHEET 3 AA4 3 GLU A 249 LEU A 250 -1 N LEU A 250 O VAL A 271 SHEET 1 AA5 9 ALA B 99 ILE B 102 0 SHEET 2 AA5 9 ARG B 69 LEU B 72 1 N VAL B 70 O LEU B 101 SHEET 3 AA5 9 THR B 32 ASN B 35 1 N VAL B 33 O MET B 71 SHEET 4 AA5 9 ILE B 181 GLU B 184 1 O GLU B 184 N ILE B 34 SHEET 5 AA5 9 VAL B 4 ASP B 9 1 N ASP B 5 O ILE B 181 SHEET 6 AA5 9 LEU B 222 ARG B 230 1 O ILE B 226 N LEU B 6 SHEET 7 AA5 9 GLU B 290 ASN B 294 1 O ASN B 294 N ALA B 229 SHEET 8 AA5 9 GLU B 323 GLY B 328 1 O TYR B 326 N LEU B 293 SHEET 9 AA5 9 VAL B 336 LEU B 338 -1 O GLU B 337 N LEU B 327 SHEET 1 AA6 2 HIS B 43 ILE B 46 0 SHEET 2 AA6 2 LYS B 52 HIS B 55 -1 O TRP B 53 N TYR B 45 SHEET 1 AA7 2 VAL B 77 PHE B 78 0 SHEET 2 AA7 2 THR B 107 VAL B 108 1 O THR B 107 N PHE B 78 SHEET 1 AA8 3 ILE B 234 ARG B 235 0 SHEET 2 AA8 3 ARG B 270 PHE B 272 -1 O ARG B 270 N ARG B 235 SHEET 3 AA8 3 GLU B 249 LEU B 250 -1 N LEU B 250 O VAL B 271 CISPEP 1 TYR A 198 PRO A 199 0 5.70 CISPEP 2 TYR B 198 PRO B 199 0 5.78 SITE 1 AC1 6 ALA A 41 THR A 262 THR A 263 VAL A 264 SITE 2 AC1 6 ARG A 269 HOH A 536 SITE 1 AC2 20 SER A 14 ASN A 40 ALA A 41 GLY A 126 SITE 2 AC2 20 SER A 127 THR A 128 GLN A 187 LEU A 191 SITE 3 AC2 20 CYS A 201 THR A 202 VAL A 236 ATP A 404 SITE 4 AC2 20 HOH A 506 HOH A 525 HOH A 526 HOH A 541 SITE 5 AC2 20 HOH A 550 HOH A 573 HOH A 640 ARG B 142 SITE 1 AC3 9 LEU A 24 LYS A 27 ASN A 28 ARG A 180 SITE 2 AC3 9 LYS A 224 GLU A 290 LYS A 325 TYR A 326 SITE 3 AC3 9 HOH A 565 SITE 1 AC4 22 SER A 14 THR A 15 GLY A 16 LYS A 17 SITE 2 AC4 22 GLY A 18 ALA A 41 GLY A 42 HIS A 43 SITE 3 AC4 22 THR A 44 GLN A 187 ASN A 294 PHE A 295 SITE 4 AC4 22 ASN A 297 GLY A 330 PRO A 331 DGP A 402 SITE 5 AC4 22 HOH A 501 HOH A 523 HOH A 547 HOH A 618 SITE 6 AC4 22 HOH A 649 HOH A 676 SITE 1 AC5 20 ARG A 142 PHE B 12 SER B 14 ASN B 40 SITE 2 AC5 20 ALA B 41 GLY B 126 SER B 127 THR B 128 SITE 3 AC5 20 GLN B 187 LEU B 191 CYS B 201 THR B 202 SITE 4 AC5 20 VAL B 236 ATP B 402 HOH B 514 HOH B 525 SITE 5 AC5 20 HOH B 534 HOH B 554 HOH B 580 HOH B 624 SITE 1 AC6 18 GLY B 13 SER B 14 THR B 15 GLY B 16 SITE 2 AC6 18 LYS B 17 GLY B 18 ALA B 41 GLY B 42 SITE 3 AC6 18 HIS B 43 THR B 44 GLN B 187 ASN B 294 SITE 4 AC6 18 PHE B 295 ASN B 297 GLY B 330 PRO B 331 SITE 5 AC6 18 DGP B 401 HOH B 527 CRYST1 91.970 91.970 192.750 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010873 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005188 0.00000