HEADER PROTEIN FIBRIL 28-JAN-18 6FLT OBSLTE 15-FEB-23 6FLT 6H6B TITLE STRUCTURE OF ALPHA-SYNUCLEIN FIBRILS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-SYNUCLEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J; COMPND 4 SYNONYM: NON-A BETA COMPONENT OF AD AMYLOID,NON-A4 COMPONENT OF COMPND 5 AMYLOID PRECURSOR,NACP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SNCA, NACP, PARK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS PARKINSON'S DISEASE, APHA-SYNUCLEIN, FIBRIL, FILAMENT, PROTEIN FIBRIL EXPDTA ELECTRON MICROSCOPY AUTHOR R.GUERRERO-FERREIRA,N.M.I.TAYLOR,D.MONA,R.RIEK,M.BRITSCHGI, AUTHOR 2 H.STAHLBERG REVDAT 4 15-FEB-23 6FLT 1 OBSLTE REVDAT 3 23-OCT-19 6FLT 1 CRYST1 SCALE REVDAT 2 11-JUL-18 6FLT 1 JRNL REVDAT 1 27-JUN-18 6FLT 0 JRNL AUTH R.GUERRERO-FERREIRA,N.M.I.TAYLOR,D.MONA,P.RINGLER,M.E.LAUER, JRNL AUTH 2 R.RIEK,M.BRITSCHGI,H.STAHLBERG JRNL TITL CRYO-EM STRUCTURE OF ALPHA-SYNUCLEIN FIBRILS. JRNL REF ELIFE V. 7 2018 JRNL REFN ESSN 2050-084X JRNL PMID 29969391 JRNL DOI 10.7554/ELIFE.36402 REMARK 2 REMARK 2 RESOLUTION. 3.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, SERIALEM, CTFFIND, COOT, REMARK 3 PHENIX, RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.420 REMARK 3 NUMBER OF PARTICLES : 13390 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6FLT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008531. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ALPHA-SYNUCLEIN FIBRILS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 5.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.30 REMARK 245 SAMPLE DETAILS : RESIDUES 1-121 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 10000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 37460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 VAL A 3 REMARK 465 PHE A 4 REMARK 465 MET A 5 REMARK 465 LYS A 6 REMARK 465 GLY A 7 REMARK 465 LEU A 8 REMARK 465 SER A 9 REMARK 465 LYS A 10 REMARK 465 ALA A 11 REMARK 465 LYS A 12 REMARK 465 GLU A 13 REMARK 465 GLY A 14 REMARK 465 VAL A 15 REMARK 465 VAL A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 LYS A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 GLN A 24 REMARK 465 GLY A 25 REMARK 465 VAL A 26 REMARK 465 ALA A 27 REMARK 465 GLU A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 GLY A 31 REMARK 465 LYS A 32 REMARK 465 THR A 33 REMARK 465 LYS A 34 REMARK 465 GLU A 35 REMARK 465 GLY A 36 REMARK 465 VAL A 37 REMARK 465 LYS A 96 REMARK 465 LYS A 97 REMARK 465 ASP A 98 REMARK 465 GLN A 99 REMARK 465 LEU A 100 REMARK 465 GLY A 101 REMARK 465 LYS A 102 REMARK 465 ASN A 103 REMARK 465 GLU A 104 REMARK 465 GLU A 105 REMARK 465 GLY A 106 REMARK 465 ALA A 107 REMARK 465 PRO A 108 REMARK 465 GLN A 109 REMARK 465 GLU A 110 REMARK 465 GLY A 111 REMARK 465 ILE A 112 REMARK 465 LEU A 113 REMARK 465 GLU A 114 REMARK 465 ASP A 115 REMARK 465 MET A 116 REMARK 465 PRO A 117 REMARK 465 VAL A 118 REMARK 465 ASP A 119 REMARK 465 PRO A 120 REMARK 465 ASP A 121 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 VAL B 3 REMARK 465 PHE B 4 REMARK 465 MET B 5 REMARK 465 LYS B 6 REMARK 465 GLY B 7 REMARK 465 LEU B 8 REMARK 465 SER B 9 REMARK 465 LYS B 10 REMARK 465 ALA B 11 REMARK 465 LYS B 12 REMARK 465 GLU B 13 REMARK 465 GLY B 14 REMARK 465 VAL B 15 REMARK 465 VAL B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 LYS B 21 REMARK 465 THR B 22 REMARK 465 LYS B 23 REMARK 465 GLN B 24 REMARK 465 GLY B 25 REMARK 465 VAL B 26 REMARK 465 ALA B 27 REMARK 465 GLU B 28 REMARK 465 ALA B 29 REMARK 465 ALA B 30 REMARK 465 GLY B 31 REMARK 465 LYS B 32 REMARK 465 THR B 33 REMARK 465 LYS B 34 REMARK 465 GLU B 35 REMARK 465 GLY B 36 REMARK 465 VAL B 37 REMARK 465 LYS B 96 REMARK 465 LYS B 97 REMARK 465 ASP B 98 REMARK 465 GLN B 99 REMARK 465 LEU B 100 REMARK 465 GLY B 101 REMARK 465 LYS B 102 REMARK 465 ASN B 103 REMARK 465 GLU B 104 REMARK 465 GLU B 105 REMARK 465 GLY B 106 REMARK 465 ALA B 107 REMARK 465 PRO B 108 REMARK 465 GLN B 109 REMARK 465 GLU B 110 REMARK 465 GLY B 111 REMARK 465 ILE B 112 REMARK 465 LEU B 113 REMARK 465 GLU B 114 REMARK 465 ASP B 115 REMARK 465 MET B 116 REMARK 465 PRO B 117 REMARK 465 VAL B 118 REMARK 465 ASP B 119 REMARK 465 PRO B 120 REMARK 465 ASP B 121 REMARK 465 MET C 1 REMARK 465 ASP C 2 REMARK 465 VAL C 3 REMARK 465 PHE C 4 REMARK 465 MET C 5 REMARK 465 LYS C 6 REMARK 465 GLY C 7 REMARK 465 LEU C 8 REMARK 465 SER C 9 REMARK 465 LYS C 10 REMARK 465 ALA C 11 REMARK 465 LYS C 12 REMARK 465 GLU C 13 REMARK 465 GLY C 14 REMARK 465 VAL C 15 REMARK 465 VAL C 16 REMARK 465 ALA C 17 REMARK 465 ALA C 18 REMARK 465 ALA C 19 REMARK 465 GLU C 20 REMARK 465 LYS C 21 REMARK 465 THR C 22 REMARK 465 LYS C 23 REMARK 465 GLN C 24 REMARK 465 GLY C 25 REMARK 465 VAL C 26 REMARK 465 ALA C 27 REMARK 465 GLU C 28 REMARK 465 ALA C 29 REMARK 465 ALA C 30 REMARK 465 GLY C 31 REMARK 465 LYS C 32 REMARK 465 THR C 33 REMARK 465 LYS C 34 REMARK 465 GLU C 35 REMARK 465 GLY C 36 REMARK 465 VAL C 37 REMARK 465 LYS C 96 REMARK 465 LYS C 97 REMARK 465 ASP C 98 REMARK 465 GLN C 99 REMARK 465 LEU C 100 REMARK 465 GLY C 101 REMARK 465 LYS C 102 REMARK 465 ASN C 103 REMARK 465 GLU C 104 REMARK 465 GLU C 105 REMARK 465 GLY C 106 REMARK 465 ALA C 107 REMARK 465 PRO C 108 REMARK 465 GLN C 109 REMARK 465 GLU C 110 REMARK 465 GLY C 111 REMARK 465 ILE C 112 REMARK 465 LEU C 113 REMARK 465 GLU C 114 REMARK 465 ASP C 115 REMARK 465 MET C 116 REMARK 465 PRO C 117 REMARK 465 VAL C 118 REMARK 465 ASP C 119 REMARK 465 PRO C 120 REMARK 465 ASP C 121 REMARK 465 MET D 1 REMARK 465 ASP D 2 REMARK 465 VAL D 3 REMARK 465 PHE D 4 REMARK 465 MET D 5 REMARK 465 LYS D 6 REMARK 465 GLY D 7 REMARK 465 LEU D 8 REMARK 465 SER D 9 REMARK 465 LYS D 10 REMARK 465 ALA D 11 REMARK 465 LYS D 12 REMARK 465 GLU D 13 REMARK 465 GLY D 14 REMARK 465 VAL D 15 REMARK 465 VAL D 16 REMARK 465 ALA D 17 REMARK 465 ALA D 18 REMARK 465 ALA D 19 REMARK 465 GLU D 20 REMARK 465 LYS D 21 REMARK 465 THR D 22 REMARK 465 LYS D 23 REMARK 465 GLN D 24 REMARK 465 GLY D 25 REMARK 465 VAL D 26 REMARK 465 ALA D 27 REMARK 465 GLU D 28 REMARK 465 ALA D 29 REMARK 465 ALA D 30 REMARK 465 GLY D 31 REMARK 465 LYS D 32 REMARK 465 THR D 33 REMARK 465 LYS D 34 REMARK 465 GLU D 35 REMARK 465 GLY D 36 REMARK 465 VAL D 37 REMARK 465 LYS D 96 REMARK 465 LYS D 97 REMARK 465 ASP D 98 REMARK 465 GLN D 99 REMARK 465 LEU D 100 REMARK 465 GLY D 101 REMARK 465 LYS D 102 REMARK 465 ASN D 103 REMARK 465 GLU D 104 REMARK 465 GLU D 105 REMARK 465 GLY D 106 REMARK 465 ALA D 107 REMARK 465 PRO D 108 REMARK 465 GLN D 109 REMARK 465 GLU D 110 REMARK 465 GLY D 111 REMARK 465 ILE D 112 REMARK 465 LEU D 113 REMARK 465 GLU D 114 REMARK 465 ASP D 115 REMARK 465 MET D 116 REMARK 465 PRO D 117 REMARK 465 VAL D 118 REMARK 465 ASP D 119 REMARK 465 PRO D 120 REMARK 465 ASP D 121 REMARK 465 MET E 1 REMARK 465 ASP E 2 REMARK 465 VAL E 3 REMARK 465 PHE E 4 REMARK 465 MET E 5 REMARK 465 LYS E 6 REMARK 465 GLY E 7 REMARK 465 LEU E 8 REMARK 465 SER E 9 REMARK 465 LYS E 10 REMARK 465 ALA E 11 REMARK 465 LYS E 12 REMARK 465 GLU E 13 REMARK 465 GLY E 14 REMARK 465 VAL E 15 REMARK 465 VAL E 16 REMARK 465 ALA E 17 REMARK 465 ALA E 18 REMARK 465 ALA E 19 REMARK 465 GLU E 20 REMARK 465 LYS E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 GLN E 24 REMARK 465 GLY E 25 REMARK 465 VAL E 26 REMARK 465 ALA E 27 REMARK 465 GLU E 28 REMARK 465 ALA E 29 REMARK 465 ALA E 30 REMARK 465 GLY E 31 REMARK 465 LYS E 32 REMARK 465 THR E 33 REMARK 465 LYS E 34 REMARK 465 GLU E 35 REMARK 465 GLY E 36 REMARK 465 VAL E 37 REMARK 465 LYS E 96 REMARK 465 LYS E 97 REMARK 465 ASP E 98 REMARK 465 GLN E 99 REMARK 465 LEU E 100 REMARK 465 GLY E 101 REMARK 465 LYS E 102 REMARK 465 ASN E 103 REMARK 465 GLU E 104 REMARK 465 GLU E 105 REMARK 465 GLY E 106 REMARK 465 ALA E 107 REMARK 465 PRO E 108 REMARK 465 GLN E 109 REMARK 465 GLU E 110 REMARK 465 GLY E 111 REMARK 465 ILE E 112 REMARK 465 LEU E 113 REMARK 465 GLU E 114 REMARK 465 ASP E 115 REMARK 465 MET E 116 REMARK 465 PRO E 117 REMARK 465 VAL E 118 REMARK 465 ASP E 119 REMARK 465 PRO E 120 REMARK 465 ASP E 121 REMARK 465 MET F 1 REMARK 465 ASP F 2 REMARK 465 VAL F 3 REMARK 465 PHE F 4 REMARK 465 MET F 5 REMARK 465 LYS F 6 REMARK 465 GLY F 7 REMARK 465 LEU F 8 REMARK 465 SER F 9 REMARK 465 LYS F 10 REMARK 465 ALA F 11 REMARK 465 LYS F 12 REMARK 465 GLU F 13 REMARK 465 GLY F 14 REMARK 465 VAL F 15 REMARK 465 VAL F 16 REMARK 465 ALA F 17 REMARK 465 ALA F 18 REMARK 465 ALA F 19 REMARK 465 GLU F 20 REMARK 465 LYS F 21 REMARK 465 THR F 22 REMARK 465 LYS F 23 REMARK 465 GLN F 24 REMARK 465 GLY F 25 REMARK 465 VAL F 26 REMARK 465 ALA F 27 REMARK 465 GLU F 28 REMARK 465 ALA F 29 REMARK 465 ALA F 30 REMARK 465 GLY F 31 REMARK 465 LYS F 32 REMARK 465 THR F 33 REMARK 465 LYS F 34 REMARK 465 GLU F 35 REMARK 465 GLY F 36 REMARK 465 VAL F 37 REMARK 465 LYS F 96 REMARK 465 LYS F 97 REMARK 465 ASP F 98 REMARK 465 GLN F 99 REMARK 465 LEU F 100 REMARK 465 GLY F 101 REMARK 465 LYS F 102 REMARK 465 ASN F 103 REMARK 465 GLU F 104 REMARK 465 GLU F 105 REMARK 465 GLY F 106 REMARK 465 ALA F 107 REMARK 465 PRO F 108 REMARK 465 GLN F 109 REMARK 465 GLU F 110 REMARK 465 GLY F 111 REMARK 465 ILE F 112 REMARK 465 LEU F 113 REMARK 465 GLU F 114 REMARK 465 ASP F 115 REMARK 465 MET F 116 REMARK 465 PRO F 117 REMARK 465 VAL F 118 REMARK 465 ASP F 119 REMARK 465 PRO F 120 REMARK 465 ASP F 121 REMARK 465 MET G 1 REMARK 465 ASP G 2 REMARK 465 VAL G 3 REMARK 465 PHE G 4 REMARK 465 MET G 5 REMARK 465 LYS G 6 REMARK 465 GLY G 7 REMARK 465 LEU G 8 REMARK 465 SER G 9 REMARK 465 LYS G 10 REMARK 465 ALA G 11 REMARK 465 LYS G 12 REMARK 465 GLU G 13 REMARK 465 GLY G 14 REMARK 465 VAL G 15 REMARK 465 VAL G 16 REMARK 465 ALA G 17 REMARK 465 ALA G 18 REMARK 465 ALA G 19 REMARK 465 GLU G 20 REMARK 465 LYS G 21 REMARK 465 THR G 22 REMARK 465 LYS G 23 REMARK 465 GLN G 24 REMARK 465 GLY G 25 REMARK 465 VAL G 26 REMARK 465 ALA G 27 REMARK 465 GLU G 28 REMARK 465 ALA G 29 REMARK 465 ALA G 30 REMARK 465 GLY G 31 REMARK 465 LYS G 32 REMARK 465 THR G 33 REMARK 465 LYS G 34 REMARK 465 GLU G 35 REMARK 465 GLY G 36 REMARK 465 VAL G 37 REMARK 465 LYS G 96 REMARK 465 LYS G 97 REMARK 465 ASP G 98 REMARK 465 GLN G 99 REMARK 465 LEU G 100 REMARK 465 GLY G 101 REMARK 465 LYS G 102 REMARK 465 ASN G 103 REMARK 465 GLU G 104 REMARK 465 GLU G 105 REMARK 465 GLY G 106 REMARK 465 ALA G 107 REMARK 465 PRO G 108 REMARK 465 GLN G 109 REMARK 465 GLU G 110 REMARK 465 GLY G 111 REMARK 465 ILE G 112 REMARK 465 LEU G 113 REMARK 465 GLU G 114 REMARK 465 ASP G 115 REMARK 465 MET G 116 REMARK 465 PRO G 117 REMARK 465 VAL G 118 REMARK 465 ASP G 119 REMARK 465 PRO G 120 REMARK 465 ASP G 121 REMARK 465 MET H 1 REMARK 465 ASP H 2 REMARK 465 VAL H 3 REMARK 465 PHE H 4 REMARK 465 MET H 5 REMARK 465 LYS H 6 REMARK 465 GLY H 7 REMARK 465 LEU H 8 REMARK 465 SER H 9 REMARK 465 LYS H 10 REMARK 465 ALA H 11 REMARK 465 LYS H 12 REMARK 465 GLU H 13 REMARK 465 GLY H 14 REMARK 465 VAL H 15 REMARK 465 VAL H 16 REMARK 465 ALA H 17 REMARK 465 ALA H 18 REMARK 465 ALA H 19 REMARK 465 GLU H 20 REMARK 465 LYS H 21 REMARK 465 THR H 22 REMARK 465 LYS H 23 REMARK 465 GLN H 24 REMARK 465 GLY H 25 REMARK 465 VAL H 26 REMARK 465 ALA H 27 REMARK 465 GLU H 28 REMARK 465 ALA H 29 REMARK 465 ALA H 30 REMARK 465 GLY H 31 REMARK 465 LYS H 32 REMARK 465 THR H 33 REMARK 465 LYS H 34 REMARK 465 GLU H 35 REMARK 465 GLY H 36 REMARK 465 VAL H 37 REMARK 465 LYS H 96 REMARK 465 LYS H 97 REMARK 465 ASP H 98 REMARK 465 GLN H 99 REMARK 465 LEU H 100 REMARK 465 GLY H 101 REMARK 465 LYS H 102 REMARK 465 ASN H 103 REMARK 465 GLU H 104 REMARK 465 GLU H 105 REMARK 465 GLY H 106 REMARK 465 ALA H 107 REMARK 465 PRO H 108 REMARK 465 GLN H 109 REMARK 465 GLU H 110 REMARK 465 GLY H 111 REMARK 465 ILE H 112 REMARK 465 LEU H 113 REMARK 465 GLU H 114 REMARK 465 ASP H 115 REMARK 465 MET H 116 REMARK 465 PRO H 117 REMARK 465 VAL H 118 REMARK 465 ASP H 119 REMARK 465 PRO H 120 REMARK 465 ASP H 121 REMARK 465 MET I 1 REMARK 465 ASP I 2 REMARK 465 VAL I 3 REMARK 465 PHE I 4 REMARK 465 MET I 5 REMARK 465 LYS I 6 REMARK 465 GLY I 7 REMARK 465 LEU I 8 REMARK 465 SER I 9 REMARK 465 LYS I 10 REMARK 465 ALA I 11 REMARK 465 LYS I 12 REMARK 465 GLU I 13 REMARK 465 GLY I 14 REMARK 465 VAL I 15 REMARK 465 VAL I 16 REMARK 465 ALA I 17 REMARK 465 ALA I 18 REMARK 465 ALA I 19 REMARK 465 GLU I 20 REMARK 465 LYS I 21 REMARK 465 THR I 22 REMARK 465 LYS I 23 REMARK 465 GLN I 24 REMARK 465 GLY I 25 REMARK 465 VAL I 26 REMARK 465 ALA I 27 REMARK 465 GLU I 28 REMARK 465 ALA I 29 REMARK 465 ALA I 30 REMARK 465 GLY I 31 REMARK 465 LYS I 32 REMARK 465 THR I 33 REMARK 465 LYS I 34 REMARK 465 GLU I 35 REMARK 465 GLY I 36 REMARK 465 VAL I 37 REMARK 465 LYS I 96 REMARK 465 LYS I 97 REMARK 465 ASP I 98 REMARK 465 GLN I 99 REMARK 465 LEU I 100 REMARK 465 GLY I 101 REMARK 465 LYS I 102 REMARK 465 ASN I 103 REMARK 465 GLU I 104 REMARK 465 GLU I 105 REMARK 465 GLY I 106 REMARK 465 ALA I 107 REMARK 465 PRO I 108 REMARK 465 GLN I 109 REMARK 465 GLU I 110 REMARK 465 GLY I 111 REMARK 465 ILE I 112 REMARK 465 LEU I 113 REMARK 465 GLU I 114 REMARK 465 ASP I 115 REMARK 465 MET I 116 REMARK 465 PRO I 117 REMARK 465 VAL I 118 REMARK 465 ASP I 119 REMARK 465 PRO I 120 REMARK 465 ASP I 121 REMARK 465 MET J 1 REMARK 465 ASP J 2 REMARK 465 VAL J 3 REMARK 465 PHE J 4 REMARK 465 MET J 5 REMARK 465 LYS J 6 REMARK 465 GLY J 7 REMARK 465 LEU J 8 REMARK 465 SER J 9 REMARK 465 LYS J 10 REMARK 465 ALA J 11 REMARK 465 LYS J 12 REMARK 465 GLU J 13 REMARK 465 GLY J 14 REMARK 465 VAL J 15 REMARK 465 VAL J 16 REMARK 465 ALA J 17 REMARK 465 ALA J 18 REMARK 465 ALA J 19 REMARK 465 GLU J 20 REMARK 465 LYS J 21 REMARK 465 THR J 22 REMARK 465 LYS J 23 REMARK 465 GLN J 24 REMARK 465 GLY J 25 REMARK 465 VAL J 26 REMARK 465 ALA J 27 REMARK 465 GLU J 28 REMARK 465 ALA J 29 REMARK 465 ALA J 30 REMARK 465 GLY J 31 REMARK 465 LYS J 32 REMARK 465 THR J 33 REMARK 465 LYS J 34 REMARK 465 GLU J 35 REMARK 465 GLY J 36 REMARK 465 VAL J 37 REMARK 465 LYS J 96 REMARK 465 LYS J 97 REMARK 465 ASP J 98 REMARK 465 GLN J 99 REMARK 465 LEU J 100 REMARK 465 GLY J 101 REMARK 465 LYS J 102 REMARK 465 ASN J 103 REMARK 465 GLU J 104 REMARK 465 GLU J 105 REMARK 465 GLY J 106 REMARK 465 ALA J 107 REMARK 465 PRO J 108 REMARK 465 GLN J 109 REMARK 465 GLU J 110 REMARK 465 GLY J 111 REMARK 465 ILE J 112 REMARK 465 LEU J 113 REMARK 465 GLU J 114 REMARK 465 ASP J 115 REMARK 465 MET J 116 REMARK 465 PRO J 117 REMARK 465 VAL J 118 REMARK 465 ASP J 119 REMARK 465 PRO J 120 REMARK 465 ASP J 121 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU E 46 HZ1 LYS G 80 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 76 65.86 60.22 REMARK 500 ALA A 85 66.71 64.02 REMARK 500 ALA A 89 67.42 61.03 REMARK 500 ALA B 76 65.88 60.10 REMARK 500 ALA B 85 66.70 64.05 REMARK 500 ALA B 89 67.37 61.04 REMARK 500 ALA C 76 65.93 60.09 REMARK 500 ALA C 85 66.66 64.12 REMARK 500 ALA C 89 67.43 60.99 REMARK 500 ALA D 76 65.91 60.18 REMARK 500 ALA D 85 66.64 64.14 REMARK 500 ALA D 89 67.42 60.97 REMARK 500 ALA E 76 65.84 60.12 REMARK 500 ALA E 85 66.67 64.10 REMARK 500 ALA E 89 67.36 61.02 REMARK 500 ALA F 76 65.88 60.13 REMARK 500 ALA F 85 66.65 64.09 REMARK 500 ALA F 89 67.36 61.06 REMARK 500 ALA G 76 65.81 60.17 REMARK 500 ALA G 85 66.68 64.06 REMARK 500 ALA G 89 67.47 60.99 REMARK 500 ALA H 76 65.88 60.12 REMARK 500 ALA H 85 66.67 64.07 REMARK 500 ALA H 89 67.40 61.02 REMARK 500 ALA I 76 65.90 60.08 REMARK 500 ALA I 85 66.69 64.04 REMARK 500 ALA I 89 67.33 61.06 REMARK 500 ALA J 76 65.98 60.08 REMARK 500 ALA J 85 66.69 64.06 REMARK 500 ALA J 89 67.40 61.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-4276 RELATED DB: EMDB REMARK 900 STRUCTURE OF ALPHA-SYNUCLEIN FIBRILS DBREF 6FLT A 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT B 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT C 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT D 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT E 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT F 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT G 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT H 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT I 1 121 UNP P37840 SYUA_HUMAN 1 121 DBREF 6FLT J 1 121 UNP P37840 SYUA_HUMAN 1 121 SEQRES 1 A 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 A 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 A 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 A 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 A 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 A 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 A 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 A 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 A 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 A 121 VAL ASP PRO ASP SEQRES 1 B 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 B 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 B 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 B 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 B 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 B 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 B 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 B 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 B 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 B 121 VAL ASP PRO ASP SEQRES 1 C 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 C 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 C 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 C 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 C 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 C 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 C 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 C 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 C 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 C 121 VAL ASP PRO ASP SEQRES 1 D 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 D 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 D 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 D 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 D 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 D 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 D 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 D 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 D 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 D 121 VAL ASP PRO ASP SEQRES 1 E 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 E 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 E 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 E 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 E 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 E 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 E 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 E 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 E 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 E 121 VAL ASP PRO ASP SEQRES 1 F 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 F 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 F 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 F 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 F 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 F 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 F 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 F 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 F 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 F 121 VAL ASP PRO ASP SEQRES 1 G 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 G 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 G 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 G 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 G 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 G 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 G 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 G 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 G 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 G 121 VAL ASP PRO ASP SEQRES 1 H 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 H 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 H 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 H 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 H 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 H 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 H 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 H 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 H 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 H 121 VAL ASP PRO ASP SEQRES 1 I 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 I 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 I 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 I 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 I 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 I 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 I 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 I 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 I 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 I 121 VAL ASP PRO ASP SEQRES 1 J 121 MET ASP VAL PHE MET LYS GLY LEU SER LYS ALA LYS GLU SEQRES 2 J 121 GLY VAL VAL ALA ALA ALA GLU LYS THR LYS GLN GLY VAL SEQRES 3 J 121 ALA GLU ALA ALA GLY LYS THR LYS GLU GLY VAL LEU TYR SEQRES 4 J 121 VAL GLY SER LYS THR LYS GLU GLY VAL VAL HIS GLY VAL SEQRES 5 J 121 ALA THR VAL ALA GLU LYS THR LYS GLU GLN VAL THR ASN SEQRES 6 J 121 VAL GLY GLY ALA VAL VAL THR GLY VAL THR ALA VAL ALA SEQRES 7 J 121 GLN LYS THR VAL GLU GLY ALA GLY SER ILE ALA ALA ALA SEQRES 8 J 121 THR GLY PHE VAL LYS LYS ASP GLN LEU GLY LYS ASN GLU SEQRES 9 J 121 GLU GLY ALA PRO GLN GLU GLY ILE LEU GLU ASP MET PRO SEQRES 10 J 121 VAL ASP PRO ASP SHEET 1 AA1 5 HIS A 50 THR A 59 0 SHEET 2 AA1 5 HIS C 50 THR C 59 1 O LYS C 58 N GLU A 57 SHEET 3 AA1 5 HIS E 50 THR E 59 1 O LYS E 58 N GLU C 57 SHEET 4 AA1 5 HIS G 50 THR G 59 1 O LYS G 58 N GLU E 57 SHEET 5 AA1 5 VAL I 52 THR I 59 1 O LYS I 58 N GLU G 57 SHEET 1 AA2 5 VAL A 71 THR A 72 0 SHEET 2 AA2 5 VAL C 71 THR C 72 1 O VAL C 71 N THR A 72 SHEET 3 AA2 5 VAL E 71 THR E 72 1 O VAL E 71 N THR C 72 SHEET 4 AA2 5 VAL G 71 THR G 72 1 O VAL G 71 N THR E 72 SHEET 5 AA2 5 VAL I 71 THR I 72 1 O VAL I 71 N THR G 72 SHEET 1 AA3 5 HIS B 50 THR B 59 0 SHEET 2 AA3 5 HIS D 50 THR D 59 1 O LYS D 58 N GLU B 57 SHEET 3 AA3 5 HIS F 50 THR F 59 1 O LYS F 58 N GLU D 57 SHEET 4 AA3 5 HIS H 50 THR H 59 1 O LYS H 58 N GLU F 57 SHEET 5 AA3 5 HIS J 50 THR J 59 1 O LYS J 58 N GLU H 57 SHEET 1 AA4 5 VAL B 71 THR B 72 0 SHEET 2 AA4 5 VAL D 71 THR D 72 1 O VAL D 71 N THR B 72 SHEET 3 AA4 5 VAL F 71 THR F 72 1 O VAL F 71 N THR D 72 SHEET 4 AA4 5 VAL H 71 THR H 72 1 O VAL H 71 N THR F 72 SHEET 5 AA4 5 VAL J 71 THR J 72 1 O VAL J 71 N THR H 72 SHEET 1 AA5 2 SER E 87 ILE E 88 0 SHEET 2 AA5 2 SER G 87 ILE G 88 1 O ILE G 88 N SER E 87 SHEET 1 AA6 2 ALA G 78 GLN G 79 0 SHEET 2 AA6 2 ALA I 78 GLN I 79 1 O GLN I 79 N ALA G 78 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000