HEADER BIOSYNTHETIC PROTEIN 29-JAN-18 6FM0 TITLE DEOXYGUANYLOSUCCINATE SYNTHASE (DGSS) AND ATP STRUCTURE AT 1.7 TITLE 2 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLOSUCCINATE SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO PHAGE PHIVC8; SOURCE 3 ORGANISM_TAXID: 1076759; SOURCE 4 GENE: PHIVC8_P27; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 2, 6-DIAMINOPURINE, PHAGE PHIVC8, SYNTHETASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.SLEIMAN,J.LOC'H,A.HAOUZ,P.A.KAMINSKI REVDAT 2 02-JUN-21 6FM0 1 JRNL REVDAT 1 12-JUN-19 6FM0 0 JRNL AUTH D.SLEIMAN,P.S.GARCIA,M.LAGUNE,J.LOC'H,A.HAOUZ,N.TAIB, JRNL AUTH 2 P.ROTHLISBERGER,S.GRIBALDO,P.MARLIERE,P.A.KAMINSKI JRNL TITL A THIRD PURINE BIOSYNTHETIC PATHWAY ENCODED BY JRNL TITL 2 AMINOADENINE-BASED VIRAL DNA GENOMES. JRNL REF SCIENCE V. 372 516 2021 JRNL REFN ESSN 1095-9203 JRNL PMID 33926955 JRNL DOI 10.1126/SCIENCE.ABE6494 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 84182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 884293 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.990 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350 0.2M NA2SO4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.43000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.20500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.43000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.20500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 543 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 111 REMARK 465 GLU A 112 REMARK 465 ALA A 113 REMARK 465 HIS A 114 REMARK 465 LYS A 115 REMARK 465 LYS A 116 REMARK 465 ALA A 117 REMARK 465 GLU A 118 REMARK 465 VAL A 119 REMARK 465 GLY A 120 REMARK 465 ILE A 121 REMARK 465 ALA A 122 REMARK 465 THR A 123 REMARK 465 SER A 124 REMARK 465 ILE A 125 REMARK 465 GLY A 126 REMARK 465 SER A 127 REMARK 465 THR A 128 REMARK 465 GLY A 129 REMARK 465 GLN A 130 REMARK 465 GLY A 131 REMARK 465 VAL A 236 REMARK 465 GLY A 237 REMARK 465 GLY A 238 REMARK 465 THR A 239 REMARK 465 SER A 240 REMARK 465 GLY A 241 REMARK 465 LEU A 250 REMARK 465 THR A 251 REMARK 465 TRP A 252 REMARK 465 GLU A 253 REMARK 465 GLN A 254 REMARK 465 LEU A 255 REMARK 465 GLY A 256 REMARK 465 GLN A 257 REMARK 465 VAL A 258 REMARK 465 PRO A 259 REMARK 465 GLU A 260 REMARK 465 LEU A 261 REMARK 465 THR A 262 REMARK 465 THR A 263 REMARK 465 VAL A 264 REMARK 465 THR A 265 REMARK 465 LYS A 266 REMARK 465 LYS A 267 REMARK 465 VAL A 268 REMARK 465 ARG A 269 REMARK 465 MET A 343 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 111 REMARK 465 GLU B 112 REMARK 465 ALA B 113 REMARK 465 HIS B 114 REMARK 465 LYS B 115 REMARK 465 LYS B 116 REMARK 465 ALA B 117 REMARK 465 GLU B 118 REMARK 465 VAL B 119 REMARK 465 GLY B 120 REMARK 465 ILE B 121 REMARK 465 ALA B 122 REMARK 465 THR B 123 REMARK 465 SER B 124 REMARK 465 ILE B 125 REMARK 465 GLY B 126 REMARK 465 SER B 127 REMARK 465 THR B 128 REMARK 465 GLY B 129 REMARK 465 GLN B 130 REMARK 465 GLY B 237 REMARK 465 GLY B 238 REMARK 465 THR B 239 REMARK 465 SER B 240 REMARK 465 GLY B 241 REMARK 465 LEU B 250 REMARK 465 THR B 251 REMARK 465 TRP B 252 REMARK 465 GLU B 253 REMARK 465 GLN B 254 REMARK 465 LEU B 255 REMARK 465 GLY B 256 REMARK 465 GLN B 257 REMARK 465 VAL B 258 REMARK 465 PRO B 259 REMARK 465 GLU B 260 REMARK 465 LEU B 261 REMARK 465 THR B 262 REMARK 465 THR B 263 REMARK 465 VAL B 264 REMARK 465 THR B 265 REMARK 465 LYS B 266 REMARK 465 LYS B 267 REMARK 465 VAL B 268 REMARK 465 MET B 302 REMARK 465 GLY B 303 REMARK 465 TRP B 304 REMARK 465 ARG B 339 REMARK 465 GLU B 340 REMARK 465 ASP B 341 REMARK 465 VAL B 342 REMARK 465 MET B 343 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 ASN A 37 CG OD1 ND2 REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 LYS A 68 CE NZ REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 HIS A 95 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 ASP A 110 CG OD1 OD2 REMARK 470 SER A 132 OG REMARK 470 MET A 136 CG SD CE REMARK 470 GLN A 141 CG CD OE1 NE2 REMARK 470 ASN A 146 CG OD1 ND2 REMARK 470 GLN A 163 CG CD OE1 NE2 REMARK 470 GLU A 169 CD OE1 OE2 REMARK 470 LEU A 191 CG CD1 CD2 REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 LYS A 224 CE NZ REMARK 470 ARG A 230 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 ARG A 270 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 299 CG CD1 CD2 REMARK 470 MET A 302 CG SD CE REMARK 470 ASP A 306 CG OD1 OD2 REMARK 470 GLN A 310 CG CD OE1 NE2 REMARK 470 GLN A 316 CG CD OE1 NE2 REMARK 470 ASP A 321 CG OD1 OD2 REMARK 470 GLU A 323 CG CD OE1 OE2 REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 470 VAL A 342 CG1 CG2 REMARK 470 LEU B 19 CG CD1 CD2 REMARK 470 ILE B 20 CG1 CG2 CD1 REMARK 470 LYS B 27 CD CE NZ REMARK 470 ASN B 47 CG OD1 ND2 REMARK 470 GLU B 49 CG CD OE1 OE2 REMARK 470 LYS B 52 CE NZ REMARK 470 LYS B 56 CG CD CE NZ REMARK 470 LYS B 68 CE NZ REMARK 470 LEU B 72 CG CD1 CD2 REMARK 470 ARG B 82 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 LEU B 93 CG CD1 CD2 REMARK 470 HIS B 95 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ASP B 110 CG OD1 OD2 REMARK 470 SER B 132 OG REMARK 470 GLN B 141 CG CD OE1 NE2 REMARK 470 ASN B 146 CG OD1 ND2 REMARK 470 GLN B 163 CG CD OE1 NE2 REMARK 470 GLU B 179 CG CD OE1 OE2 REMARK 470 ARG B 180 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 HIS B 232 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 234 CG1 CG2 CD1 REMARK 470 VAL B 236 CG1 CG2 REMARK 470 GLN B 247 CG CD OE1 NE2 REMARK 470 GLU B 248 CG CD OE1 OE2 REMARK 470 GLU B 249 CG CD OE1 OE2 REMARK 470 ARG B 269 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 270 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 290 CG CD OE1 OE2 REMARK 470 ASN B 294 CG OD1 ND2 REMARK 470 ASN B 297 CG OD1 ND2 REMARK 470 GLN B 305 CG CD OE1 NE2 REMARK 470 HIS B 309 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 323 CG CD OE1 OE2 REMARK 470 THR B 332 OG1 CG2 REMARK 470 GLU B 337 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 11 -124.78 -127.40 REMARK 500 ALA A 36 68.46 -154.72 REMARK 500 VAL A 57 -57.28 -125.90 REMARK 500 LEU A 94 59.43 -102.45 REMARK 500 ASN A 147 36.07 -99.25 REMARK 500 ALA A 186 -134.86 -110.44 REMARK 500 GLN A 187 -175.30 -64.75 REMARK 500 CYS A 206 67.23 -111.49 REMARK 500 ASN A 297 0.36 -67.78 REMARK 500 GLN B 11 -125.95 -128.92 REMARK 500 ALA B 36 69.90 -155.55 REMARK 500 ASN B 40 5.82 -152.20 REMARK 500 VAL B 57 -54.93 -123.53 REMARK 500 LYS B 68 -32.36 -131.25 REMARK 500 LEU B 94 70.57 -108.74 REMARK 500 HIS B 95 -126.71 -90.11 REMARK 500 ASN B 147 32.57 -94.51 REMARK 500 GLN B 187 -170.24 53.08 REMARK 500 CYS B 206 68.20 -108.13 REMARK 500 ASN B 297 2.69 -67.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 577 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 578 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 579 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B 580 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH B 581 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH B 582 DISTANCE = 7.55 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FJR RELATED DB: PDB REMARK 900 RELATED ID: 6FLF RELATED DB: PDB REMARK 900 RELATED ID: 6FKO RELATED DB: PDB DBREF 6FM0 A 3 343 UNP G3FFN6 G3FFN6_9CAUD 3 343 DBREF 6FM0 B 3 343 UNP G3FFN6 G3FFN6_9CAUD 3 343 SEQADV 6FM0 MET A -19 UNP G3FFN6 INITIATING METHIONINE SEQADV 6FM0 GLY A -18 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER A -17 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER A -16 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -15 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -14 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -13 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -12 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -11 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A -10 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER A -9 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER A -8 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLY A -7 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 LEU A -6 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 VAL A -5 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 PRO A -4 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 ARG A -3 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLY A -2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER A -1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS A 0 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 MET A 1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLU A 2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 MET B -19 UNP G3FFN6 INITIATING METHIONINE SEQADV 6FM0 GLY B -18 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER B -17 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER B -16 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -15 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -14 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -13 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -12 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -11 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B -10 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER B -9 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER B -8 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLY B -7 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 LEU B -6 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 VAL B -5 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 PRO B -4 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 ARG B -3 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLY B -2 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 SER B -1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 HIS B 0 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 MET B 1 UNP G3FFN6 EXPRESSION TAG SEQADV 6FM0 GLU B 2 UNP G3FFN6 EXPRESSION TAG SEQRES 1 A 363 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 363 LEU VAL PRO ARG GLY SER HIS MET GLU ASN VAL ASP LEU SEQRES 3 A 363 VAL ILE ASP LEU GLN PHE GLY SER THR GLY LYS GLY LEU SEQRES 4 A 363 ILE ALA GLY TYR LEU ALA GLU LYS ASN GLY TYR ASP THR SEQRES 5 A 363 VAL ILE ASN ALA ASN MET PRO ASN ALA GLY HIS THR TYR SEQRES 6 A 363 ILE ASN ALA GLU GLY ARG LYS TRP MET HIS LYS VAL LEU SEQRES 7 A 363 PRO ASN GLY ILE VAL SER PRO ASN LEU LYS ARG VAL MET SEQRES 8 A 363 LEU GLY ALA GLY SER VAL PHE SER ILE ASN ARG LEU MET SEQRES 9 A 363 GLU GLU ILE GLU MET SER LYS ASP LEU LEU HIS ASP LYS SEQRES 10 A 363 VAL ALA ILE LEU ILE HIS PRO MET ALA THR VAL LEU ASP SEQRES 11 A 363 GLU GLU ALA HIS LYS LYS ALA GLU VAL GLY ILE ALA THR SEQRES 12 A 363 SER ILE GLY SER THR GLY GLN GLY SER MET ALA ALA MET SEQRES 13 A 363 VAL GLU LYS LEU GLN ARG ASP PRO THR ASN ASN THR ILE SEQRES 14 A 363 VAL ALA ARG ASP VAL ALA GLN TYR ASP GLY ARG ILE ALA SEQRES 15 A 363 GLN TYR VAL CYS THR VAL GLU GLU TRP ASP MET ALA LEU SEQRES 16 A 363 MET ALA SER GLU ARG ILE LEU ALA GLU GLY ALA GLN GLY SEQRES 17 A 363 PHE SER LEU SER LEU ASN GLN GLU PHE TYR PRO TYR CYS SEQRES 18 A 363 THR SER ARG ASP CYS THR PRO ALA ARG PHE LEU ALA ASP SEQRES 19 A 363 MET GLY ILE PRO LEU PRO MET LEU ASN LYS VAL ILE GLY SEQRES 20 A 363 THR ALA ARG CYS HIS PRO ILE ARG VAL GLY GLY THR SER SEQRES 21 A 363 GLY GLY HIS TYR PRO ASP GLN GLU GLU LEU THR TRP GLU SEQRES 22 A 363 GLN LEU GLY GLN VAL PRO GLU LEU THR THR VAL THR LYS SEQRES 23 A 363 LYS VAL ARG ARG VAL PHE SER PHE SER PHE ILE GLN MET SEQRES 24 A 363 GLN LYS ALA MET TRP THR CYS GLN PRO ASP GLU VAL PHE SEQRES 25 A 363 LEU ASN PHE CYS ASN TYR LEU SER PRO MET GLY TRP GLN SEQRES 26 A 363 ASP ILE VAL HIS GLN ILE GLU VAL ALA ALA GLN SER ARG SEQRES 27 A 363 TYR CYS ASP ALA GLU VAL LYS TYR LEU GLY PHE GLY PRO SEQRES 28 A 363 THR PHE ASN ASP VAL GLU LEU ARG GLU ASP VAL MET SEQRES 1 B 363 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 363 LEU VAL PRO ARG GLY SER HIS MET GLU ASN VAL ASP LEU SEQRES 3 B 363 VAL ILE ASP LEU GLN PHE GLY SER THR GLY LYS GLY LEU SEQRES 4 B 363 ILE ALA GLY TYR LEU ALA GLU LYS ASN GLY TYR ASP THR SEQRES 5 B 363 VAL ILE ASN ALA ASN MET PRO ASN ALA GLY HIS THR TYR SEQRES 6 B 363 ILE ASN ALA GLU GLY ARG LYS TRP MET HIS LYS VAL LEU SEQRES 7 B 363 PRO ASN GLY ILE VAL SER PRO ASN LEU LYS ARG VAL MET SEQRES 8 B 363 LEU GLY ALA GLY SER VAL PHE SER ILE ASN ARG LEU MET SEQRES 9 B 363 GLU GLU ILE GLU MET SER LYS ASP LEU LEU HIS ASP LYS SEQRES 10 B 363 VAL ALA ILE LEU ILE HIS PRO MET ALA THR VAL LEU ASP SEQRES 11 B 363 GLU GLU ALA HIS LYS LYS ALA GLU VAL GLY ILE ALA THR SEQRES 12 B 363 SER ILE GLY SER THR GLY GLN GLY SER MET ALA ALA MET SEQRES 13 B 363 VAL GLU LYS LEU GLN ARG ASP PRO THR ASN ASN THR ILE SEQRES 14 B 363 VAL ALA ARG ASP VAL ALA GLN TYR ASP GLY ARG ILE ALA SEQRES 15 B 363 GLN TYR VAL CYS THR VAL GLU GLU TRP ASP MET ALA LEU SEQRES 16 B 363 MET ALA SER GLU ARG ILE LEU ALA GLU GLY ALA GLN GLY SEQRES 17 B 363 PHE SER LEU SER LEU ASN GLN GLU PHE TYR PRO TYR CYS SEQRES 18 B 363 THR SER ARG ASP CYS THR PRO ALA ARG PHE LEU ALA ASP SEQRES 19 B 363 MET GLY ILE PRO LEU PRO MET LEU ASN LYS VAL ILE GLY SEQRES 20 B 363 THR ALA ARG CYS HIS PRO ILE ARG VAL GLY GLY THR SER SEQRES 21 B 363 GLY GLY HIS TYR PRO ASP GLN GLU GLU LEU THR TRP GLU SEQRES 22 B 363 GLN LEU GLY GLN VAL PRO GLU LEU THR THR VAL THR LYS SEQRES 23 B 363 LYS VAL ARG ARG VAL PHE SER PHE SER PHE ILE GLN MET SEQRES 24 B 363 GLN LYS ALA MET TRP THR CYS GLN PRO ASP GLU VAL PHE SEQRES 25 B 363 LEU ASN PHE CYS ASN TYR LEU SER PRO MET GLY TRP GLN SEQRES 26 B 363 ASP ILE VAL HIS GLN ILE GLU VAL ALA ALA GLN SER ARG SEQRES 27 B 363 TYR CYS ASP ALA GLU VAL LYS TYR LEU GLY PHE GLY PRO SEQRES 28 B 363 THR PHE ASN ASP VAL GLU LEU ARG GLU ASP VAL MET HET ATP A 401 31 HET ATP B 401 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 5 HOH *149(H2 O) HELIX 1 AA1 GLY A 16 GLY A 29 1 14 HELIX 2 AA2 PRO A 59 SER A 64 5 6 HELIX 3 AA3 SER A 79 SER A 90 1 12 HELIX 4 AA4 MET A 133 ARG A 142 1 10 HELIX 5 AA5 VAL A 150 ALA A 155 1 6 HELIX 6 AA6 ASP A 158 GLN A 163 1 6 HELIX 7 AA7 THR A 167 SER A 178 1 12 HELIX 8 AA8 GLY A 188 SER A 192 5 5 HELIX 9 AA9 THR A 207 GLY A 216 1 10 HELIX 10 AB1 PRO A 218 PRO A 220 5 3 HELIX 11 AB2 SER A 275 GLN A 287 1 13 HELIX 12 AB3 PHE A 295 LEU A 299 5 5 HELIX 13 AB4 SER A 300 ARG A 318 1 19 HELIX 14 AB5 THR A 332 ASN A 334 5 3 HELIX 15 AB6 GLY B 16 GLY B 29 1 14 HELIX 16 AB7 PRO B 59 SER B 64 5 6 HELIX 17 AB8 SER B 79 SER B 90 1 12 HELIX 18 AB9 SER B 132 ARG B 142 1 11 HELIX 19 AC1 VAL B 150 ALA B 155 1 6 HELIX 20 AC2 GLN B 156 TYR B 157 5 2 HELIX 21 AC3 ASP B 158 ALA B 162 5 5 HELIX 22 AC4 THR B 167 SER B 178 1 12 HELIX 23 AC5 GLY B 188 SER B 192 5 5 HELIX 24 AC6 THR B 207 MET B 215 1 9 HELIX 25 AC7 PRO B 218 PRO B 220 5 3 HELIX 26 AC8 SER B 275 GLN B 287 1 13 HELIX 27 AC9 PHE B 295 LEU B 299 5 5 HELIX 28 AD1 ASP B 306 ARG B 318 1 13 HELIX 29 AD2 THR B 332 ASN B 334 5 3 SHEET 1 AA1 9 ALA A 99 ILE A 102 0 SHEET 2 AA1 9 ARG A 69 LEU A 72 1 N VAL A 70 O LEU A 101 SHEET 3 AA1 9 THR A 32 ASN A 35 1 N VAL A 33 O MET A 71 SHEET 4 AA1 9 ILE A 181 GLU A 184 1 O GLU A 184 N ILE A 34 SHEET 5 AA1 9 VAL A 4 ASP A 9 1 N ASP A 5 O ALA A 183 SHEET 6 AA1 9 LEU A 222 ARG A 230 1 O ASN A 223 N VAL A 4 SHEET 7 AA1 9 GLU A 290 ASN A 294 1 O ASN A 294 N ALA A 229 SHEET 8 AA1 9 GLU A 323 GLY A 328 1 O GLY A 328 N LEU A 293 SHEET 9 AA1 9 VAL A 336 LEU A 338 -1 O GLU A 337 N LEU A 327 SHEET 1 AA2 2 HIS A 43 ILE A 46 0 SHEET 2 AA2 2 LYS A 52 HIS A 55 -1 O HIS A 55 N HIS A 43 SHEET 1 AA3 2 VAL A 77 PHE A 78 0 SHEET 2 AA3 2 THR A 107 VAL A 108 1 O THR A 107 N PHE A 78 SHEET 1 AA4 9 ALA B 99 ILE B 102 0 SHEET 2 AA4 9 ARG B 69 LEU B 72 1 N VAL B 70 O LEU B 101 SHEET 3 AA4 9 THR B 32 ASN B 35 1 N VAL B 33 O MET B 71 SHEET 4 AA4 9 ILE B 181 GLU B 184 1 O LEU B 182 N ILE B 34 SHEET 5 AA4 9 VAL B 4 ASP B 9 1 N ASP B 5 O ALA B 183 SHEET 6 AA4 9 LEU B 222 ARG B 230 1 O ILE B 226 N LEU B 6 SHEET 7 AA4 9 GLU B 290 ASN B 294 1 O ASN B 294 N ALA B 229 SHEET 8 AA4 9 GLU B 323 GLY B 328 1 O TYR B 326 N LEU B 293 SHEET 9 AA4 9 VAL B 336 GLU B 337 -1 O GLU B 337 N LEU B 327 SHEET 1 AA5 2 HIS B 43 ILE B 46 0 SHEET 2 AA5 2 LYS B 52 HIS B 55 -1 O TRP B 53 N TYR B 45 SHEET 1 AA6 2 VAL B 77 PHE B 78 0 SHEET 2 AA6 2 THR B 107 VAL B 108 1 O THR B 107 N PHE B 78 SHEET 1 AA7 2 ILE B 234 ARG B 235 0 SHEET 2 AA7 2 ARG B 270 VAL B 271 -1 O ARG B 270 N ARG B 235 CISPEP 1 TYR A 198 PRO A 199 0 5.93 CISPEP 2 TYR B 198 PRO B 199 0 6.22 SITE 1 AC1 12 SER A 14 THR A 15 GLY A 16 LYS A 17 SITE 2 AC1 12 GLY A 18 HIS A 43 ASN A 294 PHE A 295 SITE 3 AC1 12 ASN A 297 GLY A 330 PRO A 331 HOH A 522 SITE 1 AC2 10 GLY B 13 SER B 14 GLY B 16 LYS B 17 SITE 2 AC2 10 HIS B 43 THR B 44 GLN B 187 PHE B 295 SITE 3 AC2 10 GLY B 330 HOH B 513 CRYST1 158.860 60.410 91.030 90.00 114.76 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006295 0.000000 0.002903 0.00000 SCALE2 0.000000 0.016554 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012098 0.00000