data_6FNV # _entry.id 6FNV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6FNV pdb_00006fnv 10.2210/pdb6fnv/pdb WWPDB D_1200008630 ? ? BMRB 34236 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of mule deer prion protein with polymorphism S138' _pdbx_database_related.db_id 34236 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6FNV _pdbx_database_status.recvd_initial_deposition_date 2018-02-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Slapsak, U.' 1 ? 'Ilc, G.' 2 ? 'Plavec, J.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Solution structure of mule deer prion protein with polymorphism S138' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Slapsak, U.' 1 ? primary 'Ilc, G.' 2 ? primary 'Plavec, J.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Major prion protein' _entity.formula_weight 16008.847 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'mdPrP(S138)' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GQGGTHSQWNKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYN NQNTFVHDCVNITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQRGA ; _entity_poly.pdbx_seq_one_letter_code_can ;GQGGTHSQWNKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYN NQNTFVHDCVNITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQRGA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 GLY n 1 4 GLY n 1 5 THR n 1 6 HIS n 1 7 SER n 1 8 GLN n 1 9 TRP n 1 10 ASN n 1 11 LYS n 1 12 PRO n 1 13 SER n 1 14 LYS n 1 15 PRO n 1 16 LYS n 1 17 THR n 1 18 ASN n 1 19 MET n 1 20 LYS n 1 21 HIS n 1 22 VAL n 1 23 ALA n 1 24 GLY n 1 25 ALA n 1 26 ALA n 1 27 ALA n 1 28 ALA n 1 29 GLY n 1 30 ALA n 1 31 VAL n 1 32 VAL n 1 33 GLY n 1 34 GLY n 1 35 LEU n 1 36 GLY n 1 37 GLY n 1 38 TYR n 1 39 MET n 1 40 LEU n 1 41 GLY n 1 42 SER n 1 43 ALA n 1 44 MET n 1 45 SER n 1 46 ARG n 1 47 PRO n 1 48 LEU n 1 49 ILE n 1 50 HIS n 1 51 PHE n 1 52 GLY n 1 53 ASN n 1 54 ASP n 1 55 TYR n 1 56 GLU n 1 57 ASP n 1 58 ARG n 1 59 TYR n 1 60 TYR n 1 61 ARG n 1 62 GLU n 1 63 ASN n 1 64 MET n 1 65 TYR n 1 66 ARG n 1 67 TYR n 1 68 PRO n 1 69 ASN n 1 70 GLN n 1 71 VAL n 1 72 TYR n 1 73 TYR n 1 74 ARG n 1 75 PRO n 1 76 VAL n 1 77 ASP n 1 78 GLN n 1 79 TYR n 1 80 ASN n 1 81 ASN n 1 82 GLN n 1 83 ASN n 1 84 THR n 1 85 PHE n 1 86 VAL n 1 87 HIS n 1 88 ASP n 1 89 CYS n 1 90 VAL n 1 91 ASN n 1 92 ILE n 1 93 THR n 1 94 VAL n 1 95 LYS n 1 96 GLN n 1 97 HIS n 1 98 THR n 1 99 VAL n 1 100 THR n 1 101 THR n 1 102 THR n 1 103 THR n 1 104 LYS n 1 105 GLY n 1 106 GLU n 1 107 ASN n 1 108 PHE n 1 109 THR n 1 110 GLU n 1 111 THR n 1 112 ASP n 1 113 ILE n 1 114 LYS n 1 115 MET n 1 116 MET n 1 117 GLU n 1 118 ARG n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 GLN n 1 123 MET n 1 124 CYS n 1 125 ILE n 1 126 THR n 1 127 GLN n 1 128 TYR n 1 129 GLN n 1 130 ARG n 1 131 GLU n 1 132 SER n 1 133 GLN n 1 134 ALA n 1 135 TYR n 1 136 TYR n 1 137 GLN n 1 138 ARG n 1 139 GLY n 1 140 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 140 _entity_src_gen.gene_src_common_name 'Mule deer' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene prnp _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Odocoileus hemionus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9872 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6VS46_ODOHE _struct_ref.pdbx_db_accession Q6VS46 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQGGTHSQWNKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYN NQNTFVHDCVNITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQRGA ; _struct_ref.pdbx_align_begin 94 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6FNV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 140 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6VS46 _struct_ref_seq.db_align_beg 94 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 233 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 94 _struct_ref_seq.pdbx_auth_seq_align_end 233 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 3 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 4 1 1 '3D HNCO' 1 isotropic 5 1 1 '3D HN(CO)CA' 1 isotropic 6 1 1 '3D HNCA' 1 isotropic 7 1 1 '3D CBCA(CO)NH' 1 isotropic 8 1 1 '3D HNCACB' 1 isotropic 9 1 1 '3D HBHA(CO)NH' 1 isotropic 10 1 1 '3D C(CO)NH' 1 isotropic 11 1 1 '3D HCCH-TOCSY' 1 isotropic 12 1 1 '3D HCCH-TOCSY' 1 isotropic 13 1 1 '3D 1H-15N NOESY' 1 isotropic 14 1 1 '3D 1H-13C NOESY aliphatic' 1 isotropic 15 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units bar _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label 'mdPrP(S138)' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.48 mM [U-99% 13C; U-99% 15N] mdPrP(S138), 20 mM sodium phosphate, 90 % H2O, 10 % [U-2H] D2O, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label '13, 15N labeled' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'Uniform NMR System' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 6FNV _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6FNV _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 13 _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6FNV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 13 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement 'YASARA NOVA' ? 'Krieger, E. et al' 2 'structure calculation' CYANA 3.1 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA 1.9.1b18 'Keller and Wuthrich' 4 'peak picking' Sparky 3.114 Goddard 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 6 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' 7 collection VNMR ? Varian 8 'data analysis' PSVS ? 'Bhattacharya and Montelione' 9 'data analysis' 'CcpNmr Analysis' ? CCPN # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6FNV _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6FNV _struct.title 'Solution structure of mule deer prion protein with polymorphism S138' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6FNV _struct_keywords.text 'prion protein, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 53 ? MET A 64 ? ASN A 146 MET A 157 1 ? 12 HELX_P HELX_P2 AA2 TYR A 65 ? TYR A 67 ? TYR A 158 TYR A 160 5 ? 3 HELX_P HELX_P3 AA3 PRO A 75 ? TYR A 79 ? PRO A 168 TYR A 172 5 ? 5 HELX_P HELX_P4 AA4 ASN A 81 ? GLY A 105 ? ASN A 174 GLY A 198 1 ? 25 HELX_P HELX_P5 AA5 THR A 109 ? ARG A 138 ? THR A 202 ARG A 231 1 ? 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 89 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 124 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 182 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 217 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET A 39 ? LEU A 40 ? MET A 132 LEU A 133 AA1 2 TYR A 72 ? TYR A 73 ? TYR A 165 TYR A 166 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id MET _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 39 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id MET _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 132 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id TYR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 73 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 166 # _atom_sites.entry_id 6FNV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 94 94 GLY GLY A . n A 1 2 GLN 2 95 95 GLN GLN A . n A 1 3 GLY 3 96 96 GLY GLY A . n A 1 4 GLY 4 97 97 GLY GLY A . n A 1 5 THR 5 98 98 THR THR A . n A 1 6 HIS 6 99 99 HIS HIS A . n A 1 7 SER 7 100 100 SER SER A . n A 1 8 GLN 8 101 101 GLN GLN A . n A 1 9 TRP 9 102 102 TRP TRP A . n A 1 10 ASN 10 103 103 ASN ASN A . n A 1 11 LYS 11 104 104 LYS LYS A . n A 1 12 PRO 12 105 105 PRO PRO A . n A 1 13 SER 13 106 106 SER SER A . n A 1 14 LYS 14 107 107 LYS LYS A . n A 1 15 PRO 15 108 108 PRO PRO A . n A 1 16 LYS 16 109 109 LYS LYS A . n A 1 17 THR 17 110 110 THR THR A . n A 1 18 ASN 18 111 111 ASN ASN A . n A 1 19 MET 19 112 112 MET MET A . n A 1 20 LYS 20 113 113 LYS LYS A . n A 1 21 HIS 21 114 114 HIS HIS A . n A 1 22 VAL 22 115 115 VAL VAL A . n A 1 23 ALA 23 116 116 ALA ALA A . n A 1 24 GLY 24 117 117 GLY GLY A . n A 1 25 ALA 25 118 118 ALA ALA A . n A 1 26 ALA 26 119 119 ALA ALA A . n A 1 27 ALA 27 120 120 ALA ALA A . n A 1 28 ALA 28 121 121 ALA ALA A . n A 1 29 GLY 29 122 122 GLY GLY A . n A 1 30 ALA 30 123 123 ALA ALA A . n A 1 31 VAL 31 124 124 VAL VAL A . n A 1 32 VAL 32 125 125 VAL VAL A . n A 1 33 GLY 33 126 126 GLY GLY A . n A 1 34 GLY 34 127 127 GLY GLY A . n A 1 35 LEU 35 128 128 LEU LEU A . n A 1 36 GLY 36 129 129 GLY GLY A . n A 1 37 GLY 37 130 130 GLY GLY A . n A 1 38 TYR 38 131 131 TYR TYR A . n A 1 39 MET 39 132 132 MET MET A . n A 1 40 LEU 40 133 133 LEU LEU A . n A 1 41 GLY 41 134 134 GLY GLY A . n A 1 42 SER 42 135 135 SER SER A . n A 1 43 ALA 43 136 136 ALA ALA A . n A 1 44 MET 44 137 137 MET MET A . n A 1 45 SER 45 138 138 SER SER A . n A 1 46 ARG 46 139 139 ARG ARG A . n A 1 47 PRO 47 140 140 PRO PRO A . n A 1 48 LEU 48 141 141 LEU LEU A . n A 1 49 ILE 49 142 142 ILE ILE A . n A 1 50 HIS 50 143 143 HIS HIS A . n A 1 51 PHE 51 144 144 PHE PHE A . n A 1 52 GLY 52 145 145 GLY GLY A . n A 1 53 ASN 53 146 146 ASN ASN A . n A 1 54 ASP 54 147 147 ASP ASP A . n A 1 55 TYR 55 148 148 TYR TYR A . n A 1 56 GLU 56 149 149 GLU GLU A . n A 1 57 ASP 57 150 150 ASP ASP A . n A 1 58 ARG 58 151 151 ARG ARG A . n A 1 59 TYR 59 152 152 TYR TYR A . n A 1 60 TYR 60 153 153 TYR TYR A . n A 1 61 ARG 61 154 154 ARG ARG A . n A 1 62 GLU 62 155 155 GLU GLU A . n A 1 63 ASN 63 156 156 ASN ASN A . n A 1 64 MET 64 157 157 MET MET A . n A 1 65 TYR 65 158 158 TYR TYR A . n A 1 66 ARG 66 159 159 ARG ARG A . n A 1 67 TYR 67 160 160 TYR TYR A . n A 1 68 PRO 68 161 161 PRO PRO A . n A 1 69 ASN 69 162 162 ASN ASN A . n A 1 70 GLN 70 163 163 GLN GLN A . n A 1 71 VAL 71 164 164 VAL VAL A . n A 1 72 TYR 72 165 165 TYR TYR A . n A 1 73 TYR 73 166 166 TYR TYR A . n A 1 74 ARG 74 167 167 ARG ARG A . n A 1 75 PRO 75 168 168 PRO PRO A . n A 1 76 VAL 76 169 169 VAL VAL A . n A 1 77 ASP 77 170 170 ASP ASP A . n A 1 78 GLN 78 171 171 GLN GLN A . n A 1 79 TYR 79 172 172 TYR TYR A . n A 1 80 ASN 80 173 173 ASN ASN A . n A 1 81 ASN 81 174 174 ASN ASN A . n A 1 82 GLN 82 175 175 GLN GLN A . n A 1 83 ASN 83 176 176 ASN ASN A . n A 1 84 THR 84 177 177 THR THR A . n A 1 85 PHE 85 178 178 PHE PHE A . n A 1 86 VAL 86 179 179 VAL VAL A . n A 1 87 HIS 87 180 180 HIS HIS A . n A 1 88 ASP 88 181 181 ASP ASP A . n A 1 89 CYS 89 182 182 CYS CYS A . n A 1 90 VAL 90 183 183 VAL VAL A . n A 1 91 ASN 91 184 184 ASN ASN A . n A 1 92 ILE 92 185 185 ILE ILE A . n A 1 93 THR 93 186 186 THR THR A . n A 1 94 VAL 94 187 187 VAL VAL A . n A 1 95 LYS 95 188 188 LYS LYS A . n A 1 96 GLN 96 189 189 GLN GLN A . n A 1 97 HIS 97 190 190 HIS HIS A . n A 1 98 THR 98 191 191 THR THR A . n A 1 99 VAL 99 192 192 VAL VAL A . n A 1 100 THR 100 193 193 THR THR A . n A 1 101 THR 101 194 194 THR THR A . n A 1 102 THR 102 195 195 THR THR A . n A 1 103 THR 103 196 196 THR THR A . n A 1 104 LYS 104 197 197 LYS LYS A . n A 1 105 GLY 105 198 198 GLY GLY A . n A 1 106 GLU 106 199 199 GLU GLU A . n A 1 107 ASN 107 200 200 ASN ASN A . n A 1 108 PHE 108 201 201 PHE PHE A . n A 1 109 THR 109 202 202 THR THR A . n A 1 110 GLU 110 203 203 GLU GLU A . n A 1 111 THR 111 204 204 THR THR A . n A 1 112 ASP 112 205 205 ASP ASP A . n A 1 113 ILE 113 206 206 ILE ILE A . n A 1 114 LYS 114 207 207 LYS LYS A . n A 1 115 MET 115 208 208 MET MET A . n A 1 116 MET 116 209 209 MET MET A . n A 1 117 GLU 117 210 210 GLU GLU A . n A 1 118 ARG 118 211 211 ARG ARG A . n A 1 119 VAL 119 212 212 VAL VAL A . n A 1 120 VAL 120 213 213 VAL VAL A . n A 1 121 GLU 121 214 214 GLU GLU A . n A 1 122 GLN 122 215 215 GLN GLN A . n A 1 123 MET 123 216 216 MET MET A . n A 1 124 CYS 124 217 217 CYS CYS A . n A 1 125 ILE 125 218 218 ILE ILE A . n A 1 126 THR 126 219 219 THR THR A . n A 1 127 GLN 127 220 220 GLN GLN A . n A 1 128 TYR 128 221 221 TYR TYR A . n A 1 129 GLN 129 222 222 GLN GLN A . n A 1 130 ARG 130 223 223 ARG ARG A . n A 1 131 GLU 131 224 224 GLU GLU A . n A 1 132 SER 132 225 225 SER SER A . n A 1 133 GLN 133 226 226 GLN GLN A . n A 1 134 ALA 134 227 227 ALA ALA A . n A 1 135 TYR 135 228 228 TYR TYR A . n A 1 136 TYR 136 229 229 TYR TYR A . n A 1 137 GLN 137 230 230 GLN GLN A . n A 1 138 ARG 138 231 231 ARG ARG A . n A 1 139 GLY 139 232 232 GLY GLY A . n A 1 140 ALA 140 233 233 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 10900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-28 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'mdPrP(S138)' 0.48 ? mM '[U-99% 13C; U-99% 15N]' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 H2O 90 ? % 'natural abundance' 1 D2O 10 ? % '[U-2H]' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 5 NE A ARG 159 ? ? CZ A ARG 159 ? ? NH1 A ARG 159 ? ? 123.51 120.30 3.21 0.50 N 2 10 C A LYS 104 ? ? N A PRO 105 ? ? CA A PRO 105 ? ? 128.66 119.30 9.36 1.50 Y 3 18 C A LYS 104 ? ? N A PRO 105 ? ? CA A PRO 105 ? ? 128.46 119.30 9.16 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 107 ? ? 63.10 162.72 2 1 ALA A 123 ? ? -109.14 -165.69 3 1 LEU A 128 ? ? -132.74 -62.16 4 1 ARG A 139 ? ? -46.32 105.28 5 2 SER A 100 ? ? -151.98 46.71 6 2 ALA A 119 ? ? -141.49 46.30 7 2 LEU A 128 ? ? -133.70 -67.91 8 3 LEU A 128 ? ? -130.31 -59.53 9 3 ARG A 139 ? ? -46.49 105.80 10 3 ASN A 200 ? ? -140.34 -6.56 11 4 ASN A 111 ? ? -158.93 32.81 12 4 LEU A 128 ? ? -131.96 -72.26 13 5 GLN A 95 ? ? 62.49 -32.73 14 5 LEU A 128 ? ? -127.96 -68.98 15 5 ARG A 139 ? ? -46.52 107.71 16 5 ASN A 200 ? ? -143.46 -14.16 17 6 PRO A 105 ? ? -81.72 40.80 18 6 ASN A 111 ? ? 45.82 22.69 19 6 LEU A 128 ? ? -125.10 -67.69 20 6 ARG A 139 ? ? -46.37 105.21 21 7 SER A 100 ? ? -142.63 33.23 22 7 LEU A 128 ? ? -126.47 -73.43 23 7 ARG A 139 ? ? -46.44 105.29 24 8 LEU A 128 ? ? -125.57 -80.35 25 9 LEU A 128 ? ? -130.13 -62.35 26 10 GLN A 101 ? ? -164.13 -19.94 27 10 VAL A 124 ? ? 38.40 52.89 28 10 LEU A 128 ? ? -131.55 -60.93 29 10 ARG A 139 ? ? -48.58 107.09 30 11 THR A 110 ? ? -82.53 31.93 31 11 LEU A 128 ? ? -127.28 -68.81 32 11 ARG A 139 ? ? -46.40 105.26 33 12 SER A 100 ? ? -82.16 34.79 34 12 TRP A 102 ? ? -134.15 -49.25 35 12 ASN A 111 ? ? -84.00 43.03 36 12 LEU A 128 ? ? -133.32 -50.98 37 12 ARG A 139 ? ? -48.04 109.82 38 13 SER A 100 ? ? -150.28 -43.57 39 13 GLN A 101 ? ? 52.42 8.06 40 13 LEU A 128 ? ? -127.47 -67.40 41 14 SER A 100 ? ? -141.39 51.38 42 14 LEU A 128 ? ? -130.26 -68.04 43 15 HIS A 99 ? ? 62.93 -26.63 44 15 ASN A 103 ? ? 67.38 179.04 45 15 ALA A 119 ? ? -154.28 80.59 46 15 ALA A 120 ? ? -151.51 83.84 47 15 LEU A 128 ? ? -131.08 -62.17 48 16 THR A 110 ? ? -95.38 39.30 49 16 ALA A 119 ? ? -143.10 41.02 50 16 VAL A 124 ? ? 41.36 89.09 51 16 LEU A 128 ? ? -125.21 -64.56 52 16 ARG A 139 ? ? -46.48 107.01 53 17 ASN A 111 ? ? -156.22 26.63 54 17 LEU A 128 ? ? -125.42 -67.65 55 17 ARG A 139 ? ? -45.50 105.45 56 18 LYS A 109 ? ? -53.41 103.94 57 18 THR A 110 ? ? -86.93 41.80 58 18 ALA A 120 ? ? -114.56 58.41 59 18 LEU A 128 ? ? -126.01 -60.70 60 18 ARG A 139 ? ? -46.62 109.07 61 19 HIS A 114 ? ? -157.78 -40.61 62 19 LEU A 128 ? ? -133.97 -58.83 63 19 ARG A 139 ? ? -46.49 108.68 64 20 LYS A 107 ? ? 63.29 157.35 65 20 ASN A 111 ? ? 59.02 16.54 66 20 MET A 112 ? ? -91.14 30.36 67 20 ALA A 123 ? ? -155.70 -159.95 68 20 LEU A 128 ? ? -129.51 -76.56 69 20 ARG A 139 ? ? -50.70 106.42 70 20 ARG A 231 ? ? 47.74 23.08 # _pdbx_audit_support.funding_organization 'Slovenian Research Agency' _pdbx_audit_support.country Slovenia _pdbx_audit_support.grant_number P1-424 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #