HEADER ELECTRON TRANSPORT 06-FEB-18 6FO4 OBSLTE 20-MAR-19 6FO4 TITLE THE CRYOFROZEN ATOMIC RESOLUTION NEUTRON CRYSTAL STRUCTURE OF THE TITLE 2 REDUCED FORM PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN (100K, TITLE 3 0.94A RESOLUTION) SHOWS HYDRONIUMS AND ZUNDEL CATIONS NETWORKS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUBREDOXIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RD; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: PERDEUTERATED IN D2O SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS (STRAIN ATCC 43587 / DSM SOURCE 3 3638 / JCM 8422 / VC1); SOURCE 4 ORGANISM_TAXID: 186497; SOURCE 5 STRAIN: ATCC 43587 / DSM 3638 / JCM 8422 / VC1; SOURCE 6 ATCC: 43587; SOURCE 7 GENE: RUB, PF1282; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28 KEYWDS PERDEUTERATED, RUBREDOXIN, PYROCOCCUS FURIOSUS, ATOMIC RESOLUTION, KEYWDS 2 CRYOSTREAM FROZEN CRYSTAL, ZUNDEL CATION, [H5O2]+, HYDRONIUM, D3O, KEYWDS 3 EIGEN CATION, ELECTRON TRANSPORT., ELECTRON TRANSPORT EXPDTA NEUTRON DIFFRACTION AUTHOR M.G.CUYPERS,S.A.MASON,E.MOSSOU,J.DEVOS,M.HAERTLEIN,E.MITCHELL, AUTHOR 2 V.T.FORSYTH REVDAT 3 23-JUN-21 6FO4 1 OBSLTE FORMUL REVDAT 2 20-MAR-19 6FO4 1 OBSLTE REVDAT 1 13-MAR-19 6FO4 0 JRNL AUTH M.G.CUYPERS,S.A.MASON,E.MOSSOU,J.DEVOS,M.HAERTLEIN, JRNL AUTH 2 E.MITCHELL,V.T.FORSYTH JRNL TITL THE CRYOFROZEN ATOMIC RESOLUTION NEUTRON CRYSTAL STRUCTURE JRNL TITL 2 OF THE REDUCED FORM PERDEUTERATED PYROCOCCUS FURIOSUS JRNL TITL 3 RUBREDOXIN (100K, 0.94A RESOLUTION) SHOWS HYDRONIUMS AND JRNL TITL 4 ZUNDEL CATIONS NETWORKS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 0.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3026: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 29615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.134 REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 1465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.3606 - 2.0244 0.99 3383 180 0.1192 0.1401 REMARK 3 2 2.0244 - 1.6071 0.98 3206 163 0.0982 0.1268 REMARK 3 3 1.6071 - 1.4040 0.95 3071 161 0.1146 0.1615 REMARK 3 4 1.4040 - 1.2757 0.91 2913 138 0.1062 0.1643 REMARK 3 5 1.2757 - 1.1843 0.88 2831 138 0.1099 0.1753 REMARK 3 6 1.1843 - 1.1145 0.86 2769 153 0.1029 0.1435 REMARK 3 7 1.1145 - 1.0587 0.83 2627 140 0.1652 0.2079 REMARK 3 8 1.0587 - 1.0126 0.80 2555 120 0.1807 0.2178 REMARK 3 9 1.0126 - 0.9736 0.78 2437 147 0.3058 0.3558 REMARK 3 10 0.9736 - 0.9400 0.75 2358 125 0.3658 0.3801 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1107 REMARK 3 ANGLE : 1.290 1806 REMARK 3 CHIRALITY : 0.073 61 REMARK 3 PLANARITY : 0.010 187 REMARK 3 DIHEDRAL : 16.192 250 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ALL ATOMS ANISOTROPIC EXCEPT PROTEIN REMARK 3 ATOMS FROM RESIDUE PRO44 (2 CONFORMATIONS). SHARED OCCUPANCY FOR REMARK 3 ONE D ATOMS OF 2 D3O+ (HYDRONIUMS). ZUNDEL CATIONS [D2O_D_OD2]+ REMARK 3 ARE REFINED UNRESTRAINTED WITH CENTRAL D ATOM AS D8U DEUTERIUM REMARK 3 ATOM. REMARK 4 REMARK 4 6FO4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 5 REMARK 5 OBSOLETION UPON AUTHORS REQUEST, NO SUPERSEDING ENTRY REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008645. REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 30-JUL-12 REMARK 230 TEMPERATURE (KELVIN) : 100.0 REMARK 230 PH : 6.50 REMARK 230 NUMBER OF CRYSTALS USED : 1 REMARK 230 REMARK 230 NEUTRON SOURCE : NUCLEAR REACTOR REMARK 230 BEAMLINE : D19 REMARK 230 WAVELENGTH OR RANGE (A) : 1.46 REMARK 230 MONOCHROMATOR : PYROLYTIC GRAPHITE (002) REMARK 230 OPTICS : BORON CARBIDE BEAM DEFINING REMARK 230 APERTURES, DETECTOR= 5ATM 3HE REMARK 230 CURVED 120X30 DEGREES (IGNORE REMARK 230 PILATUS AS FORCED TO ENTER FOR REMARK 230 SUBMISSION) REMARK 230 REMARK 230 DETECTOR TYPE : PIXEL REMARK 230 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 230 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM RETREAT (NOT IMOSFLM) REMARK 230 DATA SCALING SOFTWARE : SCALA REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 29669 REMARK 230 RESOLUTION RANGE HIGH (A) : 0.940 REMARK 230 RESOLUTION RANGE LOW (A) : 27.090 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 230 DATA REDUNDANCY : 2.300 REMARK 230 R MERGE (I) : 0.06300 REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : 7.8000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.94 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.99 REMARK 230 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 230 DATA REDUNDANCY IN SHELL : 1.90 REMARK 230 R MERGE FOR SHELL (I) : 0.41500 REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : 1.500 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 230 SOFTWARE USED : MOLREP REMARK 230 STARTING MODEL: 5NVT REMARK 230 REMARK 230 REMARK: 4.5 MM^3 VOLUME SQUARE BIPYRAMID, REDUCED FORM IS REMARK 230 TRANSPARENT. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.4M EQUIMOLAR NA/K PHOSPHATE BUFFER, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.95000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.62000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 21.62000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.95000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 17.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 D D8U A 124 O HOH A 298 1.27 REMARK 500 D D8U A 115 O HOH A 243 1.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 18 64.89 -155.09 REMARK 500 ASP A 18 65.62 -155.09 REMARK 500 ILE A 40 -61.16 -93.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 320 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 321 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 322 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A 323 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 324 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A 325 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 326 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A 327 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A 328 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH A 329 DISTANCE = 7.19 ANGSTROMS REMARK 525 HOH A 330 DISTANCE = 7.58 ANGSTROMS REMARK 525 HOH A 331 DISTANCE = 8.49 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 5 SG REMARK 620 2 CYS A 8 SG 110.8 REMARK 620 3 CYS A 38 SG 115.2 102.9 REMARK 620 4 CYS A 41 SG 103.9 111.3 112.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D3O A 110 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5NVT RELATED DB: PDB REMARK 900 NEUTRON STRUCTURE AT ATOMIC RESOLUTION OF REDUCED IRON PF REMARK 900 RUBREDOXIN (100K) REMARK 900 RELATED ID: 5OME RELATED DB: PDB REMARK 900 X-RAY STRUCTURE AT ATOMIC RESOLUTION OF REDUCED PF RUBREDOXIN (100K) REMARK 900 RELATED ID: 5NW3 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE AT ATOMIC RESOLUTION OF OXIDISED PF RUBREDOXIN REMARK 900 (100K) REMARK 900 RELATED ID: 4AR3 RELATED DB: PDB REMARK 900 NEAR-ATOMIC RESOLUTION NEUTRON CRYSTALLOGRAPHY ON THE OXIDISED FORM REMARK 900 PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN (295K) REMARK 900 RELATED ID: 4AR4 RELATED DB: PDB REMARK 900 NEUTRON CRYSTALLOGRAPHIC STRUCTURE OF THE REDUCED FORM REMARK 900 PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN TO 1.38 ANGSTROM REMARK 900 RESOLUTION (295K) REMARK 900 RELATED ID: 4AR5 RELATED DB: PDB REMARK 900 X-RAY CRYSTALLOGRAPHIC STRUCTURE OF THE OXIDISED FORM PERDEUTERATED REMARK 900 PYROCOCCUS FURIOSUS RUBREDOXIN IN D2O AT 295K (IN QUARTZ CAPILLARY) REMARK 900 TO 1.00 ANGSTROM RESOLUTION. REMARK 900 RELATED ID: 4AR6 RELATED DB: PDB REMARK 900 X-RAY CRYSTALLOGRAPHIC STRUCTURE OF THE REDUCED FORM PERDEUTERATED REMARK 900 PYROCOCCUS FURIOSUS RUBREDOXIN AT 295 K (IN QUARTZ CAPILLARY) TO REMARK 900 0.92 ANGSTROMS RESOLUTION. REMARK 900 RELATED ID: 5AI2 RELATED DB: PDB REMARK 900 ANOMALOUS NEUTRON PHASED CRYSTAL STRUCTURE OF 113CD-SUBSTITUTED REMARK 900 PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN TO 1.75A RESOLUTION AT REMARK 900 295K REMARK 900 RELATED ID: 5AI3 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF 113CD-SUBSTITUTED PERDEUTERATED PYROCOCCUS REMARK 900 FURIOSUS RUBREDOXIN TO 1.02A RESOLUTION AT 295K IN A QUARTZ REMARK 900 CAPILLARY DBREF 6FO4 A 0 53 UNP P24297 RUBR_PYRFU 1 54 SEQRES 1 A 54 MET ALA LYS TRP VAL CYS LYS ILE CYS GLY TYR ILE TYR SEQRES 2 A 54 ASP GLU ASP ALA GLY ASP PRO ASP ASN GLY ILE SER PRO SEQRES 3 A 54 GLY THR LYS PHE GLU GLU LEU PRO ASP ASP TRP VAL CYS SEQRES 4 A 54 PRO ILE CYS GLY ALA PRO LYS SER GLU PHE GLU LYS LEU SEQRES 5 A 54 GLU ASP HET FE A 101 1 HET D3O A 102 4 HET D3O A 103 4 HET D3O A 104 4 HET D3O A 105 4 HET D3O A 106 4 HET D3O A 107 4 HET D3O A 108 4 HET D3O A 109 4 HET D3O A 110 4 HET D8U A 111 1 HET D8U A 112 1 HET D8U A 113 1 HET D8U A 114 1 HET D8U A 115 1 HET D8U A 116 1 HET D8U A 117 1 HET D8U A 118 1 HET D8U A 119 1 HET D8U A 120 1 HET D8U A 121 1 HET D8U A 122 1 HET D8U A 123 1 HET D8U A 124 1 HETNAM FE FE (III) ION HETNAM D3O TRIDEUTERIOOXIDANIUM HETNAM D8U DEUTERIUM(1+) HETSYN D3O PERDEUTERATED OXONIUM FORMUL 2 FE FE 3+ FORMUL 3 D3O 9(D3 O 1+) FORMUL 12 D8U 14(D 1+) FORMUL 26 HOH *131(H2 O) HELIX 1 AA1 ASP A 18 GLY A 22 5 5 HELIX 2 AA2 LYS A 28 LEU A 32 5 5 HELIX 3 AA3 PRO A 44 SER A 46 5 3 SHEET 1 AA1 3 ILE A 11 ASP A 13 0 SHEET 2 AA1 3 LYS A 2 CYS A 5 -1 N TRP A 3 O TYR A 12 SHEET 3 AA1 3 PHE A 48 LYS A 50 -1 O GLU A 49 N VAL A 4 LINK SG CYS A 5 FE FE A 101 1555 1555 2.33 LINK SG CYS A 8 FE FE A 101 1555 1555 2.34 LINK SG CYS A 38 FE FE A 101 1555 1555 2.33 LINK SG CYS A 41 FE FE A 101 1555 1555 2.30 SITE 1 AC1 4 CYS A 5 CYS A 8 CYS A 38 CYS A 41 SITE 1 AC2 2 SER A 24 PRO A 25 SITE 1 AC3 2 ASP A 15 HOH A 208 SITE 1 AC4 4 GLU A 52 ASP A 53 HOH A 210 HOH A 259 SITE 1 AC5 5 LYS A 28 GLU A 31 HOH A 221 HOH A 242 SITE 2 AC5 5 HOH A 267 SITE 1 AC6 5 TRP A 36 VAL A 37 HOH A 227 HOH A 264 SITE 2 AC6 5 HOH A 269 SITE 1 AC7 4 TYR A 10 ASP A 18 PRO A 39 HOH A 255 SITE 1 AC8 3 ASP A 20 HOH A 220 HOH A 253 SITE 1 AC9 4 GLU A 52 HOH A 202 HOH A 204 HOH A 243 SITE 1 AD1 5 ILE A 23 SER A 24 THR A 27 HOH A 203 SITE 2 AD1 5 HOH A 247 CRYST1 33.900 34.750 43.240 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029499 0.000000 0.000000 0.00000 SCALE2 0.000000 0.028777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023127 0.00000