HEADER METAL BINDING PROTEIN 07-FEB-18 6FON TITLE ELONGATED CONFORMER OF THE HUMAN COPPER CHAPERONE FOR SOD1 COMPLEXED TITLE 2 WITH HUMAN SOD1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: SUPEROXIDE DISMUTASE COPPER CHAPERONE; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: SUPEROXIDE DISMUTASE 1,HSOD1; COMPND 10 EC: 1.15.1.1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CCS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SOD1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHAPERONE, ZINC, COPPER, HETERODIMER, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.S.A.WRIGHT,F.A.SALA,S.V.ANTONYUK,R.C.GARRATT,S.S.HASNAIN REVDAT 3 17-JAN-24 6FON 1 REMARK REVDAT 2 19-JUN-19 6FON 1 JRNL REVDAT 1 30-JAN-19 6FON 0 JRNL AUTH F.A.SALA,G.S.A.WRIGHT,S.V.ANTONYUK,R.C.GARRATT,S.S.HASNAIN JRNL TITL MOLECULAR RECOGNITION AND MATURATION OF SOD1 BY ITS JRNL TITL 2 EVOLUTIONARILY DESTABILISED COGNATE CHAPERONE HCCS. JRNL REF PLOS BIOL. V. 17 00141 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 30735496 JRNL DOI 10.1371/JOURNAL.PBIO.3000141 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1234 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1688 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3710 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5929 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.99000 REMARK 3 B22 (A**2) : 0.99000 REMARK 3 B33 (A**2) : -3.21000 REMARK 3 B12 (A**2) : 0.49000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.391 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.332 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.088 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6065 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5506 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8210 ; 1.460 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12800 ; 0.945 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 814 ; 7.185 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 276 ;39.727 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 981 ;15.161 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;16.817 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 912 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7047 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1143 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3256 ; 6.417 ; 9.396 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3255 ; 6.414 ; 9.395 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4070 ; 9.819 ;14.087 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4071 ; 9.818 ;14.088 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2809 ; 5.969 ; 9.600 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2806 ; 5.970 ; 9.600 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4139 ; 9.258 ;14.280 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6171 ;12.927 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6172 ;12.926 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 8 259 C 8 259 13736 0.10 0.05 REMARK 3 2 B 1 153 D 1 153 8870 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. TLS WAS USED DURING REFINEMENT. REMARK 4 REMARK 4 6FON COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24090 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 44.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 1.42900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6FOL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.0 0.2 M MAGNESIUM REMARK 280 CHLORIDE 20 % (W/V) PEG 6000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 86.24050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.79098 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 73.08133 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 86.24050 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 49.79098 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 73.08133 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 86.24050 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 49.79098 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 73.08133 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 86.24050 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 49.79098 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 73.08133 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 86.24050 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 49.79098 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 73.08133 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 86.24050 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 49.79098 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 73.08133 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 99.58195 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 146.16267 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 99.58195 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 146.16267 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 99.58195 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 146.16267 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 99.58195 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 146.16267 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 99.58195 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 146.16267 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 99.58195 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 146.16267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 19 CG CD OE1 NE2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLN A 49 CG CD OE1 NE2 REMARK 470 GLN C 19 CG CD OE1 NE2 REMARK 470 LYS C 31 CG CD CE NZ REMARK 470 GLN C 34 CG CD OE1 NE2 REMARK 470 LEU C 46 CG CD1 CD2 REMARK 470 GLN C 49 CG CD OE1 NE2 REMARK 470 THR C 69 OG1 CG2 REMARK 470 GLN C 72 CG CD OE1 NE2 REMARK 470 LYS C 216 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 163 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 CYS C 246 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 12 -164.58 -102.83 REMARK 500 THR A 21 -55.66 -137.27 REMARK 500 PRO A 124 141.82 -35.60 REMARK 500 ASN A 140 -132.11 48.36 REMARK 500 ALA A 175 -59.23 -28.55 REMARK 500 CYS A 244 139.72 -173.92 REMARK 500 ASP B 90 -167.66 -78.04 REMARK 500 CYS C 12 -169.68 -104.55 REMARK 500 THR C 21 -55.37 -136.44 REMARK 500 PRO C 124 141.25 -36.54 REMARK 500 PRO C 124 141.25 -37.12 REMARK 500 ASN C 140 -133.08 49.98 REMARK 500 ALA C 175 -59.51 -28.64 REMARK 500 CYS C 244 140.36 -174.69 REMARK 500 CYS C 246 -149.41 -149.99 REMARK 500 SER D 25 -70.88 -50.80 REMARK 500 ASN D 26 70.70 -101.70 REMARK 500 ASP D 90 -167.19 -79.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 147 ND1 REMARK 620 2 HIS A 155 ND1 98.3 REMARK 620 3 HIS A 164 ND1 118.0 130.4 REMARK 620 4 ASP A 167 OD1 86.7 88.5 123.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 63 ND1 REMARK 620 2 HIS B 71 ND1 107.1 REMARK 620 3 HIS B 80 ND1 109.4 127.1 REMARK 620 4 ASP B 83 OD1 93.9 89.8 123.8 REMARK 620 5 ASP B 83 OD2 148.4 73.9 92.8 54.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 147 ND1 REMARK 620 2 HIS C 155 ND1 100.9 REMARK 620 3 HIS C 164 ND1 113.9 127.4 REMARK 620 4 ASP C 167 OD1 90.4 91.9 124.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 63 ND1 REMARK 620 2 HIS D 71 ND1 106.2 REMARK 620 3 HIS D 80 ND1 120.3 120.0 REMARK 620 4 ASP D 83 OD1 97.3 82.4 122.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 201 DBREF 6FON A 8 259 UNP O14618 CCS_HUMAN 8 259 DBREF 6FON B 1 153 UNP P00441 SODC_HUMAN 2 154 DBREF 6FON C 8 259 UNP O14618 CCS_HUMAN 8 259 DBREF 6FON D 1 153 UNP P00441 SODC_HUMAN 2 154 SEQADV 6FON SER A 22 UNP O14618 CYS 22 CONFLICT SEQADV 6FON SER A 25 UNP O14618 CYS 25 CONFLICT SEQADV 6FON ALA B 57 UNP P00441 CYS 58 CONFLICT SEQADV 6FON ALA B 146 UNP P00441 CYS 147 CONFLICT SEQADV 6FON SER C 22 UNP O14618 CYS 22 CONFLICT SEQADV 6FON SER C 25 UNP O14618 CYS 25 CONFLICT SEQADV 6FON ALA D 57 UNP P00441 CYS 58 CONFLICT SEQADV 6FON ALA D 146 UNP P00441 CYS 147 CONFLICT SEQRES 1 A 252 GLN GLY THR LEU CYS THR LEU GLU PHE ALA VAL GLN MET SEQRES 2 A 252 THR SER GLN SER SER VAL ASP ALA VAL ARG LYS SER LEU SEQRES 3 A 252 GLN GLY VAL ALA GLY VAL GLN ASP VAL GLU VAL HIS LEU SEQRES 4 A 252 GLU ASP GLN MET VAL LEU VAL HIS THR THR LEU PRO SER SEQRES 5 A 252 GLN GLU VAL GLN ALA LEU LEU GLU GLY THR GLY ARG GLN SEQRES 6 A 252 ALA VAL LEU LYS GLY MET GLY SER GLY GLN LEU GLN ASN SEQRES 7 A 252 LEU GLY ALA ALA VAL ALA ILE LEU GLY GLY PRO GLY THR SEQRES 8 A 252 VAL GLN GLY VAL VAL ARG PHE LEU GLN LEU THR PRO GLU SEQRES 9 A 252 ARG CYS LEU ILE GLU GLY THR ILE ASP GLY LEU GLU PRO SEQRES 10 A 252 GLY LEU HIS GLY LEU HIS VAL HIS GLN TYR GLY ASP LEU SEQRES 11 A 252 THR ASN ASN CYS ASN SER CYS GLY ASN HIS PHE ASN PRO SEQRES 12 A 252 ASP GLY ALA SER HIS GLY GLY PRO GLN ASP SER ASP ARG SEQRES 13 A 252 HIS ARG GLY ASP LEU GLY ASN VAL ARG ALA ASP ALA ASP SEQRES 14 A 252 GLY ARG ALA ILE PHE ARG MET GLU ASP GLU GLN LEU LYS SEQRES 15 A 252 VAL TRP ASP VAL ILE GLY ARG SER LEU ILE ILE ASP GLU SEQRES 16 A 252 GLY GLU ASP ASP LEU GLY ARG GLY GLY HIS PRO LEU SER SEQRES 17 A 252 LYS ILE THR GLY ASN SER GLY GLU ARG LEU ALA CYS GLY SEQRES 18 A 252 ILE ILE ALA ARG SER ALA GLY LEU PHE GLN ASN PRO LYS SEQRES 19 A 252 GLN ILE CYS SER CYS ASP GLY LEU THR ILE TRP GLU GLU SEQRES 20 A 252 ARG GLY ARG PRO ILE SEQRES 1 B 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 B 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 B 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 B 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 B 153 ASN THR ALA GLY ALA THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 B 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 B 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 B 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 B 153 SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR LEU SEQRES 10 B 153 VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY GLY SEQRES 11 B 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 B 153 LEU ALA ALA GLY VAL ILE GLY ILE ALA GLN SEQRES 1 C 252 GLN GLY THR LEU CYS THR LEU GLU PHE ALA VAL GLN MET SEQRES 2 C 252 THR SER GLN SER SER VAL ASP ALA VAL ARG LYS SER LEU SEQRES 3 C 252 GLN GLY VAL ALA GLY VAL GLN ASP VAL GLU VAL HIS LEU SEQRES 4 C 252 GLU ASP GLN MET VAL LEU VAL HIS THR THR LEU PRO SER SEQRES 5 C 252 GLN GLU VAL GLN ALA LEU LEU GLU GLY THR GLY ARG GLN SEQRES 6 C 252 ALA VAL LEU LYS GLY MET GLY SER GLY GLN LEU GLN ASN SEQRES 7 C 252 LEU GLY ALA ALA VAL ALA ILE LEU GLY GLY PRO GLY THR SEQRES 8 C 252 VAL GLN GLY VAL VAL ARG PHE LEU GLN LEU THR PRO GLU SEQRES 9 C 252 ARG CYS LEU ILE GLU GLY THR ILE ASP GLY LEU GLU PRO SEQRES 10 C 252 GLY LEU HIS GLY LEU HIS VAL HIS GLN TYR GLY ASP LEU SEQRES 11 C 252 THR ASN ASN CYS ASN SER CYS GLY ASN HIS PHE ASN PRO SEQRES 12 C 252 ASP GLY ALA SER HIS GLY GLY PRO GLN ASP SER ASP ARG SEQRES 13 C 252 HIS ARG GLY ASP LEU GLY ASN VAL ARG ALA ASP ALA ASP SEQRES 14 C 252 GLY ARG ALA ILE PHE ARG MET GLU ASP GLU GLN LEU LYS SEQRES 15 C 252 VAL TRP ASP VAL ILE GLY ARG SER LEU ILE ILE ASP GLU SEQRES 16 C 252 GLY GLU ASP ASP LEU GLY ARG GLY GLY HIS PRO LEU SER SEQRES 17 C 252 LYS ILE THR GLY ASN SER GLY GLU ARG LEU ALA CYS GLY SEQRES 18 C 252 ILE ILE ALA ARG SER ALA GLY LEU PHE GLN ASN PRO LYS SEQRES 19 C 252 GLN ILE CYS SER CYS ASP GLY LEU THR ILE TRP GLU GLU SEQRES 20 C 252 ARG GLY ARG PRO ILE SEQRES 1 D 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 D 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 D 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 D 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 D 153 ASN THR ALA GLY ALA THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 D 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 D 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 D 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 D 153 SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR LEU SEQRES 10 D 153 VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY GLY SEQRES 11 D 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 D 153 LEU ALA ALA GLY VAL ILE GLY ILE ALA GLN HET ZN A 501 1 HET ZN B 201 1 HET ZN C 301 1 HET ZN D 201 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *2(H2 O) HELIX 1 AA1 SER A 22 GLN A 34 1 13 HELIX 2 AA2 PRO A 58 GLY A 68 1 11 HELIX 3 AA3 ASN A 139 SER A 143 5 5 HELIX 4 AA4 LYS A 189 ILE A 194 1 6 HELIX 5 AA5 LEU A 214 GLY A 219 1 6 HELIX 6 AA6 GLY B 56 GLY B 61 1 6 HELIX 7 AA7 SER B 107 CYS B 111 5 5 HELIX 8 AA8 SER C 22 GLN C 34 1 13 HELIX 9 AA9 PRO C 58 GLY C 68 1 11 HELIX 10 AB1 ASN C 139 SER C 143 5 5 HELIX 11 AB2 LYS C 189 ILE C 194 1 6 HELIX 12 AB3 LEU C 214 GLY C 219 1 6 HELIX 13 AB4 GLY D 56 GLY D 61 1 6 HELIX 14 AB5 SER D 107 CYS D 111 5 5 SHEET 1 AA1 4 VAL A 39 HIS A 45 0 SHEET 2 AA1 4 MET A 50 THR A 55 -1 O HIS A 54 N ASP A 41 SHEET 3 AA1 4 CYS A 12 VAL A 18 -1 N PHE A 16 O VAL A 51 SHEET 4 AA1 4 ALA A 73 GLY A 79 -1 O VAL A 74 N ALA A 17 SHEET 1 AA2 5 ARG A 178 ASP A 185 0 SHEET 2 AA2 5 ARG A 112 ASP A 120 -1 N ILE A 115 O MET A 183 SHEET 3 AA2 5 GLN A 100 THR A 109 -1 N LEU A 106 O LEU A 114 SHEET 4 AA2 5 ALA A 88 LEU A 93 -1 N ALA A 89 O PHE A 105 SHEET 5 AA2 5 ALA A 231 ARG A 232 -1 O ALA A 231 N VAL A 90 SHEET 1 AA3 4 ASP A 167 ALA A 173 0 SHEET 2 AA3 4 GLY A 125 HIS A 132 -1 N GLY A 125 O ALA A 173 SHEET 3 AA3 4 SER A 197 ASP A 201 -1 O SER A 197 N HIS A 132 SHEET 4 AA3 4 ARG A 224 ILE A 229 -1 O GLY A 228 N LEU A 198 SHEET 1 AA4 2 LYS A 241 CYS A 246 0 SHEET 2 AA4 2 LEU A 249 GLU A 253 -1 O ILE A 251 N ILE A 243 SHEET 1 AA5 5 ALA B 95 ASP B 101 0 SHEET 2 AA5 5 VAL B 29 LYS B 36 -1 N VAL B 31 O ILE B 99 SHEET 3 AA5 5 GLN B 15 GLN B 22 -1 N ASN B 19 O TRP B 32 SHEET 4 AA5 5 LYS B 3 LYS B 9 -1 N ALA B 4 O PHE B 20 SHEET 5 AA5 5 GLY B 150 ALA B 152 -1 O GLY B 150 N VAL B 5 SHEET 1 AA6 4 ASP B 83 ALA B 89 0 SHEET 2 AA6 4 GLY B 41 HIS B 48 -1 N GLY B 41 O ALA B 89 SHEET 3 AA6 4 THR B 116 HIS B 120 -1 O THR B 116 N HIS B 48 SHEET 4 AA6 4 ARG B 143 VAL B 148 -1 O GLY B 147 N LEU B 117 SHEET 1 AA7 4 VAL C 39 GLU C 43 0 SHEET 2 AA7 4 MET C 50 THR C 55 -1 O HIS C 54 N ASP C 41 SHEET 3 AA7 4 CYS C 12 VAL C 18 -1 N PHE C 16 O VAL C 51 SHEET 4 AA7 4 ALA C 73 GLY C 79 -1 O VAL C 74 N ALA C 17 SHEET 1 AA8 5 ARG C 178 ASP C 185 0 SHEET 2 AA8 5 ARG C 112 ASP C 120 -1 N ILE C 115 O MET C 183 SHEET 3 AA8 5 GLN C 100 THR C 109 -1 N LEU C 106 O LEU C 114 SHEET 4 AA8 5 ALA C 88 LEU C 93 -1 N ALA C 89 O PHE C 105 SHEET 5 AA8 5 ALA C 231 ARG C 232 -1 O ALA C 231 N VAL C 90 SHEET 1 AA9 4 ASP C 167 ALA C 173 0 SHEET 2 AA9 4 GLY C 125 HIS C 132 -1 N GLY C 125 O ALA C 173 SHEET 3 AA9 4 SER C 197 ASP C 201 -1 O SER C 197 N HIS C 132 SHEET 4 AA9 4 ARG C 224 ILE C 229 -1 O GLY C 228 N LEU C 198 SHEET 1 AB1 2 LYS C 241 CYS C 246 0 SHEET 2 AB1 2 LEU C 249 GLU C 253 -1 O ILE C 251 N ILE C 243 SHEET 1 AB2 5 ALA D 95 ASP D 101 0 SHEET 2 AB2 5 VAL D 29 LYS D 36 -1 N VAL D 31 O ILE D 99 SHEET 3 AB2 5 GLN D 15 GLN D 22 -1 N ASN D 19 O TRP D 32 SHEET 4 AB2 5 LYS D 3 LYS D 9 -1 N ALA D 4 O PHE D 20 SHEET 5 AB2 5 GLY D 150 ALA D 152 -1 O GLY D 150 N VAL D 5 SHEET 1 AB3 4 ASP D 83 ALA D 89 0 SHEET 2 AB3 4 GLY D 41 HIS D 48 -1 N GLY D 41 O ALA D 89 SHEET 3 AB3 4 THR D 116 HIS D 120 -1 O THR D 116 N HIS D 48 SHEET 4 AB3 4 ARG D 143 VAL D 148 -1 O GLY D 147 N LEU D 117 SSBOND 1 CYS A 141 CYS A 227 1555 1555 2.10 SSBOND 2 CYS C 141 CYS C 227 1555 1555 2.11 LINK ND1 HIS A 147 ZN ZN A 501 1555 1555 2.10 LINK ND1 HIS A 155 ZN ZN A 501 1555 1555 2.15 LINK ND1 HIS A 164 ZN ZN A 501 1555 1555 1.96 LINK OD1 ASP A 167 ZN ZN A 501 1555 1555 2.06 LINK ND1 HIS B 63 ZN ZN B 201 1555 1555 2.21 LINK ND1 HIS B 71 ZN ZN B 201 1555 1555 2.11 LINK ND1 HIS B 80 ZN ZN B 201 1555 1555 2.09 LINK OD1 ASP B 83 ZN ZN B 201 1555 1555 1.93 LINK OD2 ASP B 83 ZN ZN B 201 1555 1555 2.58 LINK ND1 HIS C 147 ZN ZN C 301 1555 1555 2.07 LINK ND1 HIS C 155 ZN ZN C 301 1555 1555 2.11 LINK ND1 HIS C 164 ZN ZN C 301 1555 1555 2.06 LINK OD1 ASP C 167 ZN ZN C 301 1555 1555 1.95 LINK ND1 HIS D 63 ZN ZN D 201 1555 1555 2.03 LINK ND1 HIS D 71 ZN ZN D 201 1555 1555 2.31 LINK ND1 HIS D 80 ZN ZN D 201 1555 1555 2.03 LINK OD1 ASP D 83 ZN ZN D 201 1555 1555 2.01 SITE 1 AC1 4 HIS A 147 HIS A 155 HIS A 164 ASP A 167 SITE 1 AC2 4 HIS B 63 HIS B 71 HIS B 80 ASP B 83 SITE 1 AC3 4 HIS C 147 HIS C 155 HIS C 164 ASP C 167 SITE 1 AC4 5 HIS D 63 HIS D 71 HIS D 80 ASP D 83 SITE 2 AC4 5 LYS D 136 CRYST1 172.481 172.481 219.244 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005798 0.003347 0.000000 0.00000 SCALE2 0.000000 0.006695 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004561 0.00000