HEADER OXIDOREDUCTASE 19-FEB-18 6FSL TITLE F194W MUTANT OF THE DYE-DECOLORIZING PEROXIDASE (DYP) FROM PLEUROTUS TITLE 2 OSTREATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYP-TYPE PEROXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLEUROTUS OSTREATUS; SOURCE 3 ORGANISM_TAXID: 5322; SOURCE 4 GENE: DYP4, PLEOSDRAFT_1069077; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.ROMERO,I.DAVO-SIGUERO REVDAT 2 17-JAN-24 6FSL 1 REMARK REVDAT 1 13-MAR-19 6FSL 0 JRNL AUTH A.ROMERO,I.DAVO-SIGUERO,A.T.MARTINEZ JRNL TITL STRUCTURE OF TWO MUTANTS: F194Y AND F194W OF THE JRNL TITL 2 DYE-DECOLORIZING PEROXIDASE DYP FROM PLEUROTUS OSTREATUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 32741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1667 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2308 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7496 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : -0.93000 REMARK 3 B33 (A**2) : 0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.991 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.301 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.230 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.318 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7802 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7306 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10613 ; 1.597 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16851 ; 0.994 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 966 ; 6.811 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 367 ;36.227 ;24.223 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1220 ;15.418 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;20.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1114 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8984 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1838 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3870 ; 1.687 ; 2.422 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3869 ; 1.685 ; 2.422 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4834 ; 2.904 ; 3.628 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4835 ; 2.904 ; 3.629 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3932 ; 1.652 ; 2.509 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3930 ; 1.652 ; 2.509 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5779 ; 2.846 ; 3.694 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8378 ; 4.879 ;27.524 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8368 ; 4.876 ;27.515 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976252 REMARK 200 MONOCHROMATOR : STANDARD ESRF CHANNEL CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34465 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 88.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.26800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.92300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3AFV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MES PH=5.75 25% PEG2000 MME, PH REMARK 280 5.75, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.93450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.53900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.53900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.93450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 68 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 74 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP A 352 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 77 94.50 -27.14 REMARK 500 HIS A 168 38.77 -92.47 REMARK 500 PHE A 206 -58.78 -133.54 REMARK 500 ASP A 316 13.82 -145.57 REMARK 500 ARG A 341 -128.26 52.18 REMARK 500 TRP A 405 -65.22 -109.15 REMARK 500 PHE B 206 -62.19 -134.80 REMARK 500 ARG B 341 -130.45 56.33 REMARK 500 TRP B 405 -70.07 -115.17 REMARK 500 ASP B 454 75.70 -156.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 72 GLY A 73 -149.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 334 NE2 REMARK 620 2 HEM A 501 NA 84.3 REMARK 620 3 HEM A 501 NB 86.9 90.0 REMARK 620 4 HEM A 501 NC 95.2 177.5 87.6 REMARK 620 5 HEM A 501 ND 93.3 90.8 179.2 91.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 334 NE2 REMARK 620 2 HEM B 501 NA 93.1 REMARK 620 3 HEM B 501 NB 91.3 91.1 REMARK 620 4 HEM B 501 NC 91.6 175.2 89.9 REMARK 620 5 HEM B 501 ND 93.8 87.9 174.9 90.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FSK RELATED DB: PDB REMARK 900 A TRP MUTANT INSTEAD OF TYR DBREF1 6FSL A 6 489 UNP A0A067N4E7_PLEOS DBREF2 6FSL A A0A067N4E7 6 489 DBREF1 6FSL B 6 489 UNP A0A067N4E7_PLEOS DBREF2 6FSL B A0A067N4E7 6 489 SEQADV 6FSL TRP A 194 UNP A0A067N4E PHE 194 ENGINEERED MUTATION SEQADV 6FSL TRP B 194 UNP A0A067N4E PHE 194 ENGINEERED MUTATION SEQRES 1 A 484 PRO PRO LEU ASP LEU ASN ASN ILE GLN GLY ASP ILE LEU SEQRES 2 A 484 GLY GLY LEU PRO LYS ARG THR GLU THR TYR PHE PHE PHE SEQRES 3 A 484 ASP VAL THR ASN VAL ASP GLN PHE LYS ALA ASN MET ALA SEQRES 4 A 484 HIS PHE ILE PRO HIS ILE LYS THR SER ALA GLY ILE ILE SEQRES 5 A 484 LYS ASP ARG GLU ALA ILE LYS GLU HIS LYS ARG GLN LYS SEQRES 6 A 484 LYS PRO GLY LEU VAL PRO MET ALA ALA VAL ASN VAL SER SEQRES 7 A 484 PHE SER HIS LEU GLY LEU GLN LYS LEU GLY ILE THR ASP SEQRES 8 A 484 ASP LEU SER ASP ASN ALA PHE THR THR GLY GLN ARG LYS SEQRES 9 A 484 ASP ALA GLU ILE LEU GLY ASP PRO GLY SER LYS ASN GLY SEQRES 10 A 484 ASP ALA PHE THR PRO ALA TRP GLU ALA PRO PHE LEU LYS SEQRES 11 A 484 ASP ILE HIS GLY VAL ILE PHE VAL ALA GLY ASP CYS HIS SEQRES 12 A 484 GLY SER VAL ASN LYS LYS LEU ASP GLU ILE LYS HIS ILE SEQRES 13 A 484 PHE GLY VAL GLY THR SER HIS ALA SER ILE SER GLU VAL SEQRES 14 A 484 THR HIS VAL ARG GLY ASP VAL ARG PRO GLY ASP VAL HIS SEQRES 15 A 484 ALA HIS GLU HIS PHE GLY TRP LEU ASP GLY ILE SER ASN SEQRES 16 A 484 PRO ALA VAL GLU GLN PHE ASP GLN ASN PRO LEU PRO GLY SEQRES 17 A 484 GLN ASP PRO ILE ARG PRO GLY PHE ILE LEU ALA LYS GLU SEQRES 18 A 484 ASN GLY ASP SER ARG ALA ALA ALA ARG PRO ASP TRP ALA SEQRES 19 A 484 LYS ASP GLY SER PHE LEU THR PHE ARG TYR LEU PHE GLN SEQRES 20 A 484 MET VAL PRO GLU PHE ASP ASP PHE LEU GLU SER ASN PRO SEQRES 21 A 484 ILE VAL LEU PRO GLY LEU SER ARG LYS GLU GLY SER GLU SEQRES 22 A 484 LEU LEU GLY ALA ARG ILE VAL GLY ARG TRP LYS SER GLY SEQRES 23 A 484 ALA PRO ILE GLU ILE THR PRO LEU LYS ASP ASP PRO LYS SEQRES 24 A 484 LEU ALA ALA ASP ALA GLN ARG ASN ASN LYS PHE ASP PHE SEQRES 25 A 484 GLY ASP SER LEU VAL ARG GLY ASP GLN THR LYS CYS PRO SEQRES 26 A 484 PHE ALA ALA HIS ILE ARG LYS THR TYR PRO ARG ASN ASP SEQRES 27 A 484 LEU GLU GLY PRO PRO LEU LYS ALA ASP ILE ASP ASN ARG SEQRES 28 A 484 ARG ILE ILE ARG ARG GLY ILE GLN PHE GLY PRO GLU VAL SEQRES 29 A 484 THR SER GLN GLU HIS HIS ASP LYS LYS THR HIS HIS GLY SEQRES 30 A 484 ARG GLY LEU LEU PHE VAL CYS TYR SER SER SER ILE ASP SEQRES 31 A 484 ASP GLY PHE HIS PHE ILE GLN GLU SER TRP ALA ASN ALA SEQRES 32 A 484 PRO ASN PHE PRO VAL ASN ALA VAL THR SER ALA GLY PRO SEQRES 33 A 484 ILE PRO PRO LEU ASP GLY VAL VAL PRO GLY PHE ASP ALA SEQRES 34 A 484 ILE ILE GLY GLN LYS VAL GLY GLY GLY ILE ARG GLN ILE SEQRES 35 A 484 SER GLY THR ASN PRO ASN ASP PRO THR THR ASN ILE THR SEQRES 36 A 484 LEU PRO ASP GLN ASP PHE VAL VAL PRO ARG GLY GLY GLU SEQRES 37 A 484 TYR PHE PHE SER PRO SER ILE THR ALA LEU LYS THR LYS SEQRES 38 A 484 PHE ALA ILE SEQRES 1 B 484 PRO PRO LEU ASP LEU ASN ASN ILE GLN GLY ASP ILE LEU SEQRES 2 B 484 GLY GLY LEU PRO LYS ARG THR GLU THR TYR PHE PHE PHE SEQRES 3 B 484 ASP VAL THR ASN VAL ASP GLN PHE LYS ALA ASN MET ALA SEQRES 4 B 484 HIS PHE ILE PRO HIS ILE LYS THR SER ALA GLY ILE ILE SEQRES 5 B 484 LYS ASP ARG GLU ALA ILE LYS GLU HIS LYS ARG GLN LYS SEQRES 6 B 484 LYS PRO GLY LEU VAL PRO MET ALA ALA VAL ASN VAL SER SEQRES 7 B 484 PHE SER HIS LEU GLY LEU GLN LYS LEU GLY ILE THR ASP SEQRES 8 B 484 ASP LEU SER ASP ASN ALA PHE THR THR GLY GLN ARG LYS SEQRES 9 B 484 ASP ALA GLU ILE LEU GLY ASP PRO GLY SER LYS ASN GLY SEQRES 10 B 484 ASP ALA PHE THR PRO ALA TRP GLU ALA PRO PHE LEU LYS SEQRES 11 B 484 ASP ILE HIS GLY VAL ILE PHE VAL ALA GLY ASP CYS HIS SEQRES 12 B 484 GLY SER VAL ASN LYS LYS LEU ASP GLU ILE LYS HIS ILE SEQRES 13 B 484 PHE GLY VAL GLY THR SER HIS ALA SER ILE SER GLU VAL SEQRES 14 B 484 THR HIS VAL ARG GLY ASP VAL ARG PRO GLY ASP VAL HIS SEQRES 15 B 484 ALA HIS GLU HIS PHE GLY TRP LEU ASP GLY ILE SER ASN SEQRES 16 B 484 PRO ALA VAL GLU GLN PHE ASP GLN ASN PRO LEU PRO GLY SEQRES 17 B 484 GLN ASP PRO ILE ARG PRO GLY PHE ILE LEU ALA LYS GLU SEQRES 18 B 484 ASN GLY ASP SER ARG ALA ALA ALA ARG PRO ASP TRP ALA SEQRES 19 B 484 LYS ASP GLY SER PHE LEU THR PHE ARG TYR LEU PHE GLN SEQRES 20 B 484 MET VAL PRO GLU PHE ASP ASP PHE LEU GLU SER ASN PRO SEQRES 21 B 484 ILE VAL LEU PRO GLY LEU SER ARG LYS GLU GLY SER GLU SEQRES 22 B 484 LEU LEU GLY ALA ARG ILE VAL GLY ARG TRP LYS SER GLY SEQRES 23 B 484 ALA PRO ILE GLU ILE THR PRO LEU LYS ASP ASP PRO LYS SEQRES 24 B 484 LEU ALA ALA ASP ALA GLN ARG ASN ASN LYS PHE ASP PHE SEQRES 25 B 484 GLY ASP SER LEU VAL ARG GLY ASP GLN THR LYS CYS PRO SEQRES 26 B 484 PHE ALA ALA HIS ILE ARG LYS THR TYR PRO ARG ASN ASP SEQRES 27 B 484 LEU GLU GLY PRO PRO LEU LYS ALA ASP ILE ASP ASN ARG SEQRES 28 B 484 ARG ILE ILE ARG ARG GLY ILE GLN PHE GLY PRO GLU VAL SEQRES 29 B 484 THR SER GLN GLU HIS HIS ASP LYS LYS THR HIS HIS GLY SEQRES 30 B 484 ARG GLY LEU LEU PHE VAL CYS TYR SER SER SER ILE ASP SEQRES 31 B 484 ASP GLY PHE HIS PHE ILE GLN GLU SER TRP ALA ASN ALA SEQRES 32 B 484 PRO ASN PHE PRO VAL ASN ALA VAL THR SER ALA GLY PRO SEQRES 33 B 484 ILE PRO PRO LEU ASP GLY VAL VAL PRO GLY PHE ASP ALA SEQRES 34 B 484 ILE ILE GLY GLN LYS VAL GLY GLY GLY ILE ARG GLN ILE SEQRES 35 B 484 SER GLY THR ASN PRO ASN ASP PRO THR THR ASN ILE THR SEQRES 36 B 484 LEU PRO ASP GLN ASP PHE VAL VAL PRO ARG GLY GLY GLU SEQRES 37 B 484 TYR PHE PHE SER PRO SER ILE THR ALA LEU LYS THR LYS SEQRES 38 B 484 PHE ALA ILE HET HEM A 501 43 HET HEM B 501 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 5 HOH *184(H2 O) HELIX 1 AA1 ASN A 35 ILE A 47 1 13 HELIX 2 AA2 PRO A 48 ILE A 50 5 3 HELIX 3 AA3 THR A 52 GLN A 69 1 18 HELIX 4 AA4 HIS A 86 LEU A 92 1 7 HELIX 5 AA5 ASP A 100 GLY A 106 1 7 HELIX 6 AA6 GLY A 106 GLY A 115 1 10 HELIX 7 AA7 GLU A 130 LYS A 135 5 6 HELIX 8 AA8 CYS A 147 PHE A 162 1 16 HELIX 9 AA9 PRO A 183 HIS A 187 5 5 HELIX 10 AB1 ARG A 218 ILE A 222 5 5 HELIX 11 AB2 ARG A 231 ARG A 235 5 5 HELIX 12 AB3 PRO A 236 LYS A 240 5 5 HELIX 13 AB4 MET A 253 ASN A 264 1 12 HELIX 14 AB5 SER A 272 GLY A 286 1 15 HELIX 15 AB6 ASP A 302 ASP A 308 1 7 HELIX 16 AB7 ALA A 333 TYR A 339 1 7 HELIX 17 AB8 ARG A 341 GLY A 346 1 6 HELIX 18 AB9 ILE A 353 ARG A 357 5 5 HELIX 19 AC1 THR A 370 LYS A 377 1 8 HELIX 20 AC2 GLY A 397 TRP A 405 1 9 HELIX 21 AC3 PRO A 412 SER A 418 1 7 HELIX 22 AC4 ILE A 422 ASP A 426 5 5 HELIX 23 AC5 SER A 479 PHE A 487 1 9 HELIX 24 AC6 ASN B 35 ILE B 47 1 13 HELIX 25 AC7 PRO B 48 ILE B 50 5 3 HELIX 26 AC8 THR B 52 GLN B 69 1 18 HELIX 27 AC9 HIS B 86 LEU B 92 1 7 HELIX 28 AD1 ASP B 100 GLY B 106 1 7 HELIX 29 AD2 GLY B 106 GLY B 115 1 10 HELIX 30 AD3 GLU B 130 LYS B 135 1 6 HELIX 31 AD4 CYS B 147 PHE B 162 1 16 HELIX 32 AD5 PRO B 183 HIS B 187 5 5 HELIX 33 AD6 ARG B 218 ILE B 222 5 5 HELIX 34 AD7 ARG B 231 ARG B 235 5 5 HELIX 35 AD8 PRO B 236 LYS B 240 5 5 HELIX 36 AD9 MET B 253 SER B 263 1 11 HELIX 37 AE1 SER B 272 GLY B 286 1 15 HELIX 38 AE2 ASP B 302 ASP B 308 1 7 HELIX 39 AE3 ALA B 333 TYR B 339 1 7 HELIX 40 AE4 ARG B 341 GLY B 346 1 6 HELIX 41 AE5 ILE B 353 ARG B 357 5 5 HELIX 42 AE6 THR B 370 LYS B 377 1 8 HELIX 43 AE7 GLY B 397 SER B 404 1 8 HELIX 44 AE8 PRO B 412 THR B 417 1 6 HELIX 45 AE9 ILE B 422 ASP B 426 5 5 HELIX 46 AF1 SER B 479 PHE B 487 1 9 SHEET 1 AA1 8 ILE A 171 ASP A 180 0 SHEET 2 AA1 8 THR A 25 VAL A 33 -1 N GLU A 26 O GLY A 179 SHEET 3 AA1 8 GLY A 139 GLY A 145 -1 O ILE A 141 N PHE A 29 SHEET 4 AA1 8 ALA A 79 SER A 85 -1 N ASN A 81 O PHE A 142 SHEET 5 AA1 8 VAL A 467 SER A 477 -1 O PHE A 476 N PHE A 84 SHEET 6 AA1 8 SER A 243 GLN A 252 -1 N SER A 243 O SER A 477 SHEET 7 AA1 8 GLY A 384 SER A 391 -1 O LEU A 385 N LEU A 250 SHEET 8 AA1 8 ILE A 359 ARG A 360 -1 N ILE A 359 O TYR A 390 SHEET 1 AA2 8 ILE A 171 ASP A 180 0 SHEET 2 AA2 8 THR A 25 VAL A 33 -1 N GLU A 26 O GLY A 179 SHEET 3 AA2 8 GLY A 139 GLY A 145 -1 O ILE A 141 N PHE A 29 SHEET 4 AA2 8 ALA A 79 SER A 85 -1 N ASN A 81 O PHE A 142 SHEET 5 AA2 8 VAL A 467 SER A 477 -1 O PHE A 476 N PHE A 84 SHEET 6 AA2 8 SER A 243 GLN A 252 -1 N SER A 243 O SER A 477 SHEET 7 AA2 8 GLY A 384 SER A 391 -1 O LEU A 385 N LEU A 250 SHEET 8 AA2 8 ILE A 363 PHE A 365 -1 N ILE A 363 O LEU A 386 SHEET 1 AA3 2 GLY A 118 ASN A 121 0 SHEET 2 AA3 2 ALA A 124 PRO A 127 -1 O THR A 126 N SER A 119 SHEET 1 AA4 2 ALA A 202 VAL A 203 0 SHEET 2 AA4 2 PRO A 216 ILE A 217 1 O ILE A 217 N ALA A 202 SHEET 1 AA5 2 GLN A 446 SER A 448 0 SHEET 2 AA5 2 ASN A 458 THR A 460 -1 O ILE A 459 N ILE A 447 SHEET 1 AA6 8 ILE B 171 ASP B 180 0 SHEET 2 AA6 8 THR B 25 VAL B 33 -1 N GLU B 26 O GLY B 179 SHEET 3 AA6 8 GLY B 139 GLY B 145 -1 O ILE B 141 N PHE B 29 SHEET 4 AA6 8 ALA B 79 SER B 85 -1 N SER B 83 O VAL B 140 SHEET 5 AA6 8 VAL B 467 SER B 477 -1 O PHE B 476 N PHE B 84 SHEET 6 AA6 8 SER B 243 GLN B 252 -1 N TYR B 249 O GLY B 471 SHEET 7 AA6 8 GLY B 384 SER B 391 -1 O CYS B 389 N THR B 246 SHEET 8 AA6 8 ILE B 359 ARG B 360 -1 N ILE B 359 O TYR B 390 SHEET 1 AA7 8 ILE B 171 ASP B 180 0 SHEET 2 AA7 8 THR B 25 VAL B 33 -1 N GLU B 26 O GLY B 179 SHEET 3 AA7 8 GLY B 139 GLY B 145 -1 O ILE B 141 N PHE B 29 SHEET 4 AA7 8 ALA B 79 SER B 85 -1 N SER B 83 O VAL B 140 SHEET 5 AA7 8 VAL B 467 SER B 477 -1 O PHE B 476 N PHE B 84 SHEET 6 AA7 8 SER B 243 GLN B 252 -1 N TYR B 249 O GLY B 471 SHEET 7 AA7 8 GLY B 384 SER B 391 -1 O CYS B 389 N THR B 246 SHEET 8 AA7 8 ILE B 363 PHE B 365 -1 N ILE B 363 O LEU B 386 SHEET 1 AA8 2 GLY B 118 SER B 119 0 SHEET 2 AA8 2 THR B 126 PRO B 127 -1 O THR B 126 N SER B 119 SHEET 1 AA9 2 ALA B 202 VAL B 203 0 SHEET 2 AA9 2 PRO B 216 ILE B 217 1 O ILE B 217 N ALA B 202 SHEET 1 AB1 2 GLN B 446 SER B 448 0 SHEET 2 AB1 2 ASN B 458 THR B 460 -1 O ILE B 459 N ILE B 447 LINK NE2 HIS A 334 FE HEM A 501 1555 1555 2.21 LINK NE2 HIS B 334 FE HEM B 501 1555 1555 2.36 CISPEP 1 PRO A 347 PRO A 348 0 6.43 CISPEP 2 PHE A 411 PRO A 412 0 12.37 CISPEP 3 PRO B 347 PRO B 348 0 8.33 CISPEP 4 PHE B 411 PRO B 412 0 2.96 SITE 1 AC1 21 GLU A 190 TRP A 194 LEU A 195 ASP A 196 SITE 2 AC1 21 GLY A 197 ILE A 198 SER A 199 GLN A 252 SITE 3 AC1 21 HIS A 334 ILE A 335 THR A 338 TYR A 339 SITE 4 AC1 21 ARG A 341 ARG A 360 PHE A 387 PHE A 398 SITE 5 AC1 21 ILE A 436 VAL A 467 HOH A 603 HOH A 627 SITE 6 AC1 21 HOH A 645 SITE 1 AC2 21 GLU B 190 TRP B 194 LEU B 195 ASP B 196 SITE 2 AC2 21 GLY B 197 ILE B 198 SER B 199 ARG B 287 SITE 3 AC2 21 HIS B 334 ILE B 335 THR B 338 TYR B 339 SITE 4 AC2 21 ARG B 341 ARG B 360 LEU B 385 PHE B 387 SITE 5 AC2 21 PHE B 398 ILE B 436 VAL B 467 HOH B 614 SITE 6 AC2 21 HOH B 664 CRYST1 61.869 118.140 133.078 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007514 0.00000