HEADER HYDROLASE 19-FEB-18 6FSM TITLE CRYSTAL STRUCTURE OF TCE-TREATED THERMOLYSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NEUTRAL PROTEASE; COMPND 5 EC: 3.4.24.27 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_COMMON: BACILLUS STEAROTHERMOPHILUS; SOURCE 4 ORGANISM_TAXID: 1422 KEYWDS TCE-TREATMENT, LYSOZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.PICHLO,U.BAUMANN REVDAT 3 17-JAN-24 6FSM 1 REMARK LINK REVDAT 2 09-MAY-18 6FSM 1 JRNL REVDAT 1 02-MAY-18 6FSM 0 JRNL AUTH C.PICHLO,C.TOELZER,K.CHOJNACKI,S.OCAL,M.UTHOFF,S.RUEGENBERG, JRNL AUTH 2 T.HERMANNS,M.SCHACHERL,M.S.DENZEL,K.HOFMANN,K.NIEFIND, JRNL AUTH 3 U.BAUMANN JRNL TITL IMPROVED PROTEIN-CRYSTAL IDENTIFICATION BY USING JRNL TITL 2 2,2,2-TRICHLOROETHANOL AS A FLUORESCENCE ENHANCER. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 74 307 2018 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 29717999 JRNL DOI 10.1107/S2053230X18005253 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 66884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5000 - 3.3490 1.00 5005 155 0.1517 0.1475 REMARK 3 2 3.3490 - 2.6583 1.00 4747 147 0.1428 0.1524 REMARK 3 3 2.6583 - 2.3223 1.00 4680 144 0.1290 0.1573 REMARK 3 4 2.3223 - 2.1100 1.00 4662 144 0.1253 0.1514 REMARK 3 5 2.1100 - 1.9587 1.00 4645 141 0.1313 0.1391 REMARK 3 6 1.9587 - 1.8432 1.00 4599 141 0.1322 0.1824 REMARK 3 7 1.8432 - 1.7509 1.00 4594 142 0.1398 0.1574 REMARK 3 8 1.7509 - 1.6747 1.00 4606 142 0.1458 0.1804 REMARK 3 9 1.6747 - 1.6102 1.00 4575 141 0.1500 0.1732 REMARK 3 10 1.6102 - 1.5547 1.00 4569 141 0.1659 0.1882 REMARK 3 11 1.5547 - 1.5060 1.00 4574 141 0.1816 0.1826 REMARK 3 12 1.5060 - 1.4630 1.00 4554 140 0.2021 0.2240 REMARK 3 13 1.4630 - 1.4245 1.00 4542 140 0.2301 0.2226 REMARK 3 14 1.4245 - 1.3897 1.00 4534 139 0.2582 0.2856 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2652 REMARK 3 ANGLE : 0.950 3623 REMARK 3 CHIRALITY : 0.082 380 REMARK 3 PLANARITY : 0.007 482 REMARK 3 DIHEDRAL : 14.363 932 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9063 48.5351 0.6083 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1310 REMARK 3 T33: 0.0969 T12: 0.0136 REMARK 3 T13: -0.0164 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.9677 L22: 0.5165 REMARK 3 L33: 0.4364 L12: 0.1360 REMARK 3 L13: -0.4351 L23: 0.0015 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: 0.0238 S13: 0.0518 REMARK 3 S21: 0.0395 S22: -0.0032 S23: 0.0194 REMARK 3 S31: -0.0057 S32: -0.0113 S33: -0.0255 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2468 45.8989 8.0628 REMARK 3 T TENSOR REMARK 3 T11: 0.1288 T22: 0.2149 REMARK 3 T33: 0.1243 T12: 0.0022 REMARK 3 T13: -0.0325 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.1582 L22: 7.7003 REMARK 3 L33: 1.8887 L12: 2.1458 REMARK 3 L13: 0.4757 L23: -1.3257 REMARK 3 S TENSOR REMARK 3 S11: 0.0783 S12: -0.2128 S13: -0.0792 REMARK 3 S21: 0.3979 S22: -0.1667 S23: -0.1367 REMARK 3 S31: 0.0118 S32: 0.2118 S33: 0.0687 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 201 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.8649 51.9470 -10.1675 REMARK 3 T TENSOR REMARK 3 T11: 0.0831 T22: 0.1279 REMARK 3 T33: 0.1255 T12: -0.0015 REMARK 3 T13: -0.0058 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.4633 L22: 1.4519 REMARK 3 L33: 1.0023 L12: 0.1422 REMARK 3 L13: -0.1012 L23: -0.1188 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.0284 S13: 0.0139 REMARK 3 S21: -0.0321 S22: -0.0098 S23: -0.1104 REMARK 3 S31: -0.0294 S32: 0.0824 S33: -0.0022 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 297 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.0493 60.8341 -12.9351 REMARK 3 T TENSOR REMARK 3 T11: 0.1288 T22: 0.1899 REMARK 3 T33: 0.2589 T12: -0.0303 REMARK 3 T13: 0.0307 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 1.3046 L22: 4.9573 REMARK 3 L33: 1.2094 L12: 1.0333 REMARK 3 L13: 1.0058 L23: 0.2575 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: 0.2842 S13: 0.3642 REMARK 3 S21: -0.1603 S22: -0.0072 S23: -0.4335 REMARK 3 S31: -0.1390 S32: 0.1766 S33: -0.0636 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FSM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008863. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20170920 REMARK 200 DATA SCALING SOFTWARE : XDS 20170920 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66860 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 46.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER (1.12_2829) REMARK 200 STARTING MODEL: 1TLX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 MG/ML THERMOLYSIN IN 0.05 M NAOH REMARK 280 1:1 WITH 40 MM KH2PO4, 16 % (W/V) PEG8000, 20 % (V/V) GLYCEROL, REMARK 280 30 MM TCE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.22267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.44533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.83400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 108.05667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.61133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.22267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 86.44533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 108.05667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.83400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.61133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 734 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 748 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 765 LIES ON A SPECIAL POSITION. REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 65 N CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 150 O HOH A 501 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 -58.85 70.12 REMARK 500 SER A 92 -172.84 58.99 REMARK 500 SER A 107 -161.74 60.42 REMARK 500 ASN A 111 51.49 -90.11 REMARK 500 THR A 152 -98.87 -112.69 REMARK 500 THR A 152 -98.87 -127.52 REMARK 500 ASN A 159 -144.50 61.37 REMARK 500 ASN A 159 -144.50 58.79 REMARK 500 LYS A 182 -82.52 -86.25 REMARK 500 THR A 194 77.69 39.05 REMARK 500 TYR A 274 -38.13 -133.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 VAL A 410 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 ASP A 57 OD2 52.4 REMARK 620 3 ASP A 59 OD1 70.7 122.7 REMARK 620 4 GLN A 61 O 89.0 94.5 89.6 REMARK 620 5 HOH A 588 O 146.7 158.4 76.4 95.6 REMARK 620 6 HOH A 589 O 132.1 81.2 155.6 83.1 81.2 REMARK 620 7 HOH A 733 O 88.3 86.0 86.9 176.1 85.1 100.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 138 OD2 REMARK 620 2 GLU A 177 OE1 77.0 REMARK 620 3 GLU A 177 OE2 126.8 49.8 REMARK 620 4 ASP A 185 OD1 161.9 121.1 71.3 REMARK 620 5 GLU A 187 O 85.3 147.0 139.8 79.4 REMARK 620 6 GLU A 190 OE1 84.1 127.6 124.6 83.0 76.8 REMARK 620 7 GLU A 190 OE2 96.4 81.8 77.0 85.6 128.2 52.2 REMARK 620 8 HOH A 599 O 97.5 79.5 76.5 88.1 75.5 152.0 153.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 142 NE2 REMARK 620 2 HIS A 146 NE2 103.5 REMARK 620 3 GLU A 166 OE2 122.3 97.8 REMARK 620 4 PO4 A 406 O4 113.2 133.7 86.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 177 OE2 REMARK 620 2 ASN A 183 O 92.3 REMARK 620 3 ASP A 185 OD2 87.1 93.9 REMARK 620 4 GLU A 190 OE2 81.6 171.4 79.7 REMARK 620 5 HOH A 517 O 85.4 99.5 164.8 86.1 REMARK 620 6 HOH A 604 O 173.6 92.8 96.4 93.7 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 193 O REMARK 620 2 THR A 194 O 76.3 REMARK 620 3 THR A 194 OG1 77.1 72.5 REMARK 620 4 ILE A 197 O 153.9 79.8 105.5 REMARK 620 5 ASP A 200 OD1 122.7 135.0 73.4 82.1 REMARK 620 6 HOH A 574 O 83.8 150.3 124.3 113.5 74.5 REMARK 620 7 HOH A 718 O 85.4 81.3 151.2 80.7 135.3 75.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VAL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS A 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FSJ RELATED DB: PDB REMARK 900 CRYSTALS WERE ALSO TREATED WITH TCE REMARK 900 RELATED ID: 5N12 RELATED DB: PDB REMARK 900 CRYSTALS WERE ALSO TREATED WITH TCE DBREF 6FSM A 1 316 UNP P43133 THER_GEOSE 236 551 SEQADV 6FSM ASP A 37 UNP P43133 ASN 272 CONFLICT SEQADV 6FSM GLU A 119 UNP P43133 GLN 354 CONFLICT SEQRES 1 A 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 A 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 A 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASP GLY ILE SEQRES 4 A 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 A 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 A 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 A 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 A 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 A 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 A 316 SER GLU MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 A 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 A 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 A 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 A 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 A 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 A 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 A 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 A 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 A 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 A 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 A 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 A 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 A 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 A 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 A 316 VAL GLY VAL LYS HET ZN A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET PO4 A 406 5 HET GOL A 407 14 HET GOL A 408 14 HET GOL A 409 14 HET VAL A 410 15 HET LYS A 411 23 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETNAM VAL VALINE HETNAM LYS LYSINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 CA 4(CA 2+) FORMUL 7 PO4 O4 P 3- FORMUL 8 GOL 3(C3 H8 O3) FORMUL 11 VAL C5 H11 N O2 FORMUL 12 LYS C6 H15 N2 O2 1+ FORMUL 13 HOH *296(H2 O) HELIX 1 AA1 ALA A 64 TYR A 66 5 3 HELIX 2 AA2 ASP A 67 ASN A 89 1 23 HELIX 3 AA3 PRO A 132 GLY A 135 5 4 HELIX 4 AA4 GLY A 136 THR A 152 1 17 HELIX 5 AA5 GLN A 158 ASN A 181 1 24 HELIX 6 AA6 ASP A 207 GLY A 212 5 6 HELIX 7 AA7 HIS A 216 ARG A 220 5 5 HELIX 8 AA8 THR A 224 VAL A 230 1 7 HELIX 9 AA9 ASN A 233 GLY A 247 1 15 HELIX 10 AB1 GLY A 259 TYR A 274 1 16 HELIX 11 AB2 ASN A 280 GLY A 297 1 18 HELIX 12 AB3 SER A 300 VAL A 313 1 14 SHEET 1 AA1 5 ALA A 56 ASP A 57 0 SHEET 2 AA1 5 TYR A 28 TYR A 29 -1 N TYR A 28 O ASP A 57 SHEET 3 AA1 5 GLN A 17 TYR A 24 -1 N THR A 23 O TYR A 29 SHEET 4 AA1 5 THR A 4 ARG A 11 -1 N GLY A 8 O ILE A 20 SHEET 5 AA1 5 GLN A 61 PHE A 62 1 O PHE A 62 N VAL A 9 SHEET 1 AA2 3 GLN A 31 ASP A 32 0 SHEET 2 AA2 3 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 AA2 3 SER A 53 LEU A 54 -1 O SER A 53 N ASP A 43 SHEET 1 AA3 5 GLN A 31 ASP A 32 0 SHEET 2 AA3 5 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 AA3 5 ILE A 100 TYR A 106 1 O SER A 102 N TYR A 42 SHEET 4 AA3 5 MET A 120 GLY A 123 1 O MET A 120 N ARG A 101 SHEET 5 AA3 5 ALA A 113 TRP A 115 -1 N PHE A 114 O VAL A 121 SHEET 1 AA4 2 GLU A 187 ILE A 188 0 SHEET 2 AA4 2 ARG A 203 SER A 204 -1 O ARG A 203 N ILE A 188 SHEET 1 AA5 2 GLY A 248 HIS A 250 0 SHEET 2 AA5 2 VAL A 253 VAL A 255 -1 O VAL A 255 N GLY A 248 LINK OD1 ASP A 57 CA CA A 404 1555 1555 2.54 LINK OD2 ASP A 57 CA CA A 404 1555 1555 2.35 LINK OD1 ASP A 59 CA CA A 404 1555 1555 2.37 LINK O GLN A 61 CA CA A 404 1555 1555 2.27 LINK OD2 ASP A 138 CA CA A 402 1555 1555 2.33 LINK NE2 HIS A 142 ZN ZN A 401 1555 1555 2.01 LINK NE2 HIS A 146 ZN ZN A 401 1555 1555 2.02 LINK OE2 GLU A 166 ZN ZN A 401 1555 1555 1.95 LINK OE1 GLU A 177 CA CA A 402 1555 1555 2.50 LINK OE2 GLU A 177 CA CA A 402 1555 1555 2.72 LINK OE2 GLU A 177 CA CA A 403 1555 1555 2.57 LINK O ASN A 183 CA CA A 403 1555 1555 2.33 LINK OD1 ASP A 185 CA CA A 402 1555 1555 2.44 LINK OD2 ASP A 185 CA CA A 403 1555 1555 2.42 LINK O GLU A 187 CA CA A 402 1555 1555 2.34 LINK OE1 GLU A 190 CA CA A 402 1555 1555 2.50 LINK OE2 GLU A 190 CA CA A 402 1555 1555 2.47 LINK OE2 GLU A 190 CA CA A 403 1555 1555 2.38 LINK O TYR A 193 CA CA A 405 1555 1555 2.33 LINK O THR A 194 CA CA A 405 1555 1555 2.35 LINK OG1 THR A 194 CA CA A 405 1555 1555 2.37 LINK O ILE A 197 CA CA A 405 1555 1555 2.24 LINK OD1 ASP A 200 CA CA A 405 1555 1555 2.41 LINK ZN ZN A 401 O4 PO4 A 406 1555 1555 1.96 LINK CA CA A 402 O HOH A 599 1555 1555 2.44 LINK CA CA A 403 O HOH A 517 1555 1555 2.43 LINK CA CA A 403 O HOH A 604 1555 1555 2.27 LINK CA CA A 404 O HOH A 588 1555 1555 2.35 LINK CA CA A 404 O HOH A 589 1555 1555 2.43 LINK CA CA A 404 O HOH A 733 1555 1555 2.33 LINK CA CA A 405 O HOH A 574 1555 1555 2.44 LINK CA CA A 405 O HOH A 718 1555 1555 2.47 CISPEP 1 LEU A 50 PRO A 51 0 4.15 SITE 1 AC1 4 HIS A 142 HIS A 146 GLU A 166 PO4 A 406 SITE 1 AC2 6 ASP A 138 GLU A 177 ASP A 185 GLU A 187 SITE 2 AC2 6 GLU A 190 HOH A 599 SITE 1 AC3 6 GLU A 177 ASN A 183 ASP A 185 GLU A 190 SITE 2 AC3 6 HOH A 517 HOH A 604 SITE 1 AC4 6 ASP A 57 ASP A 59 GLN A 61 HOH A 588 SITE 2 AC4 6 HOH A 589 HOH A 733 SITE 1 AC5 6 TYR A 193 THR A 194 ILE A 197 ASP A 200 SITE 2 AC5 6 HOH A 574 HOH A 718 SITE 1 AC6 12 ALA A 113 HIS A 142 GLU A 143 HIS A 146 SITE 2 AC6 12 TYR A 157 GLU A 166 HIS A 231 ZN A 401 SITE 3 AC6 12 GOL A 407 VAL A 410 LYS A 411 HOH A 516 SITE 1 AC7 8 HIS A 146 ASP A 150 TYR A 157 ASN A 165 SITE 2 AC7 8 PO4 A 406 HOH A 516 HOH A 538 HOH A 633 SITE 1 AC8 13 THR A 152 GLY A 247 GLY A 248 THR A 249 SITE 2 AC8 13 VAL A 255 GLN A 273 TYR A 274 LEU A 275 SITE 3 AC8 13 HOH A 521 HOH A 529 HOH A 544 HOH A 547 SITE 4 AC8 13 HOH A 705 SITE 1 AC9 5 GLY A 109 TYR A 110 ASN A 111 GLN A 158 SITE 2 AC9 5 LYS A 411 SITE 1 AD1 8 ASN A 112 ALA A 113 GLU A 143 LEU A 202 SITE 2 AD1 8 ARG A 203 HIS A 231 PO4 A 406 LYS A 411 SITE 1 AD2 8 ASN A 111 ASN A 112 PHE A 130 LEU A 202 SITE 2 AD2 8 HIS A 231 PO4 A 406 GOL A 409 VAL A 410 CRYST1 92.948 92.948 129.668 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010759 0.006212 0.000000 0.00000 SCALE2 0.000000 0.012423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007712 0.00000