HEADER ANTIFUNGAL PROTEIN 26-FEB-18 6FU9 TITLE COMPLEX OF RICE BLAST (MAGNAPORTHE ORYZAE) EFFECTOR PROTEIN AVR-PIKD TITLE 2 WITH THE HMA DOMAIN OF PIKM-1 FROM RICE (ORYZA SATIVA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NBS-LRR CLASS DISEASE RESISTANCE PROTEIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: AVR-PIK PROTEIN; COMPND 7 CHAIN: B, D; COMPND 8 SYNONYM: AVR-PIK PROTEIN ( PIKMPROTEIN,PIKP PROTEIN ),AVRPI7 PROTEIN; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA SUBSP. JAPONICA; SOURCE 3 ORGANISM_COMMON: RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 GENE: PIKM1-TS, PI-KM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 536056; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MAGNAPORTHE ORYZAE; SOURCE 10 ORGANISM_COMMON: RICE BLAST FUNGUS; SOURCE 11 ORGANISM_TAXID: 318829; SOURCE 12 GENE: AVR-PIK, AVRPIK, PIKM, PIKP; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH1; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 536056 KEYWDS PLANT NLR, FUNGAL EFFECTOR, PLANT IMMUNITY, COMPLEX, ANTIFUNGAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.FRANCESCHETTI,J.C.DE LA CONCEPCION,M.J.BANFIELD REVDAT 5 13-NOV-24 6FU9 1 REMARK REVDAT 4 17-JAN-24 6FU9 1 REMARK REVDAT 3 15-AUG-18 6FU9 1 JRNL REVDAT 2 18-JUL-18 6FU9 1 JRNL REVDAT 1 13-JUN-18 6FU9 0 JRNL AUTH J.C.DE LA CONCEPCION,M.FRANCESCHETTI,A.MAQBOOL,H.SAITOH, JRNL AUTH 2 R.TERAUCHI,S.KAMOUN,M.J.BANFIELD JRNL TITL POLYMORPHIC RESIDUES IN RICE NLRS EXPAND BINDING AND JRNL TITL 2 RESPONSE TO EFFECTORS OF THE BLAST PATHOGEN. JRNL REF NAT PLANTS V. 4 576 2018 JRNL REFN ESSN 2055-0278 JRNL PMID 29988155 JRNL DOI 10.1038/S41477-018-0194-X REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 99199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 5033 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6450 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 308 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2573 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 288 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.35000 REMARK 3 B22 (A**2) : -0.78000 REMARK 3 B33 (A**2) : 2.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.588 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2702 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2557 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3666 ; 1.902 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5963 ; 1.112 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 6.473 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;31.921 ;24.017 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;12.501 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.807 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 393 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3008 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 549 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1336 ; 3.326 ; 2.009 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1335 ; 3.327 ; 2.007 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1669 ; 4.323 ; 3.024 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1670 ; 4.322 ; 3.025 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1366 ; 3.619 ; 2.326 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1366 ; 3.620 ; 2.325 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1985 ; 4.253 ; 3.347 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2965 ; 5.685 ;24.737 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2915 ; 5.614 ;24.351 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5259 ; 3.752 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 204 ;30.754 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5272 ;16.539 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91680 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 0.4.0.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104301 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 5A6W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12M ETHYLENE GLYCOLS (0.3M REMARK 280 DIETHYLENE GLYCOL; 0.3M TRIETHYLENE-GLYCOL; 0.3M TETRAETHYLENE REMARK 280 GLYCOL; 0.3M PENTAETHYLENE GLYCOL); 0.1M BUFFER SYSTEM 3 (1M REMARK 280 TRIS (BASE); BICINE) PH 8.5; 50% V/V PRECIPITANT MIX 2 (40% V/V REMARK 280 ETHYLENE GLYCOL; 20 % W/V PEG 8000), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.54500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.92000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.56500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.92000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.54500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.56500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 184 REMARK 465 PRO A 185 REMARK 465 MET B 21 REMARK 465 GLU B 22 REMARK 465 THR B 23 REMARK 465 GLY B 24 REMARK 465 ASN B 25 REMARK 465 LYS B 26 REMARK 465 TYR B 27 REMARK 465 ILE B 28 REMARK 465 GLU B 29 REMARK 465 GLY C 184 REMARK 465 PRO C 185 REMARK 465 MET D 21 REMARK 465 GLU D 22 REMARK 465 THR D 23 REMARK 465 GLY D 24 REMARK 465 ASN D 25 REMARK 465 LYS D 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N TYR D 27 O HOH A 336 3644 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 189 CG - SD - CE ANGL. DEV. = -9.7 DEGREES REMARK 500 GLN C 229 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG C 247 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 200 -174.52 -171.22 REMARK 500 ASN B 61 52.25 39.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 286 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B 287 DISTANCE = 8.81 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FUB RELATED DB: PDB REMARK 900 PIKM-HMA DOMAIN IN COMPLEX WITH AVR-PIKE REMARK 900 RELATED ID: 6FUD RELATED DB: PDB REMARK 900 PIKM-HMA DOMAIN IN COMPLEX WITH AVR-PIKA REMARK 900 RELATED ID: 6G10 RELATED DB: PDB REMARK 900 PIKP-HMA DOMAIN IN COMPLEX WITH AVR-PIKD REMARK 900 RELATED ID: 6G11 RELATED DB: PDB REMARK 900 PIKP-HMA DOMAIN IN COMPLEX WITH AVR-PIKE DBREF 6FU9 A 186 264 UNP B5UBC1 B5UBC1_ORYSJ 186 264 DBREF 6FU9 B 22 113 UNP C4B8B8 C4B8B8_MAGOR 22 113 DBREF 6FU9 C 186 264 UNP B5UBC1 B5UBC1_ORYSJ 186 264 DBREF 6FU9 D 22 113 UNP C4B8B8 C4B8B8_MAGOR 22 113 SEQADV 6FU9 GLY A 184 UNP B5UBC1 EXPRESSION TAG SEQADV 6FU9 PRO A 185 UNP B5UBC1 EXPRESSION TAG SEQADV 6FU9 MET B 21 UNP C4B8B8 INITIATING METHIONINE SEQADV 6FU9 GLY C 184 UNP B5UBC1 EXPRESSION TAG SEQADV 6FU9 PRO C 185 UNP B5UBC1 EXPRESSION TAG SEQADV 6FU9 MET D 21 UNP C4B8B8 INITIATING METHIONINE SEQRES 1 A 81 GLY PRO GLY GLY GLU MET GLN LYS ILE VAL PHE LYS ILE SEQRES 2 A 81 PRO MET VAL ASP ASP LYS SER ARG THR LYS ALA MET SER SEQRES 3 A 81 LEU VAL ALA SER THR VAL GLY VAL HIS SER VAL ALA ILE SEQRES 4 A 81 ALA GLY ASP LEU ARG ASP GLN VAL VAL VAL VAL GLY ASP SEQRES 5 A 81 GLY ILE ASP SER ILE ASN LEU VAL SER ALA LEU ARG LYS SEQRES 6 A 81 LYS VAL GLY PRO ALA MET PHE LEU GLU VAL SER GLN VAL SEQRES 7 A 81 LYS GLU ASP SEQRES 1 B 93 MET GLU THR GLY ASN LYS TYR ILE GLU LYS ARG ALA ILE SEQRES 2 B 93 ASP LEU SER ARG GLU ARG ASP PRO ASN PHE PHE ASP HIS SEQRES 3 B 93 PRO GLY ILE PRO VAL PRO GLU CYS PHE TRP PHE MET PHE SEQRES 4 B 93 LYS ASN ASN VAL ARG GLN ASP ALA GLY THR CYS TYR SER SEQRES 5 B 93 SER TRP LYS MET ASP MET LYS VAL GLY PRO ASN TRP VAL SEQRES 6 B 93 HIS ILE LYS SER ASP ASP ASN CYS ASN LEU SER GLY ASP SEQRES 7 B 93 PHE PRO PRO GLY TRP ILE VAL LEU GLY LYS LYS ARG PRO SEQRES 8 B 93 GLY PHE SEQRES 1 C 81 GLY PRO GLY GLY GLU MET GLN LYS ILE VAL PHE LYS ILE SEQRES 2 C 81 PRO MET VAL ASP ASP LYS SER ARG THR LYS ALA MET SER SEQRES 3 C 81 LEU VAL ALA SER THR VAL GLY VAL HIS SER VAL ALA ILE SEQRES 4 C 81 ALA GLY ASP LEU ARG ASP GLN VAL VAL VAL VAL GLY ASP SEQRES 5 C 81 GLY ILE ASP SER ILE ASN LEU VAL SER ALA LEU ARG LYS SEQRES 6 C 81 LYS VAL GLY PRO ALA MET PHE LEU GLU VAL SER GLN VAL SEQRES 7 C 81 LYS GLU ASP SEQRES 1 D 93 MET GLU THR GLY ASN LYS TYR ILE GLU LYS ARG ALA ILE SEQRES 2 D 93 ASP LEU SER ARG GLU ARG ASP PRO ASN PHE PHE ASP HIS SEQRES 3 D 93 PRO GLY ILE PRO VAL PRO GLU CYS PHE TRP PHE MET PHE SEQRES 4 D 93 LYS ASN ASN VAL ARG GLN ASP ALA GLY THR CYS TYR SER SEQRES 5 D 93 SER TRP LYS MET ASP MET LYS VAL GLY PRO ASN TRP VAL SEQRES 6 D 93 HIS ILE LYS SER ASP ASP ASN CYS ASN LEU SER GLY ASP SEQRES 7 D 93 PHE PRO PRO GLY TRP ILE VAL LEU GLY LYS LYS ARG PRO SEQRES 8 D 93 GLY PHE FORMUL 5 HOH *288(H2 O) HELIX 1 AA1 ASP A 200 SER A 213 1 14 HELIX 2 AA2 ASP A 238 VAL A 250 1 13 HELIX 3 AA3 ASP B 34 GLU B 38 5 5 HELIX 4 AA4 ASP C 200 SER C 213 1 14 HELIX 5 AA5 ASP C 238 VAL C 250 1 13 HELIX 6 AA6 ASP D 34 GLU D 38 5 5 SHEET 1 AA1 7 VAL A 217 ALA A 223 0 SHEET 2 AA1 7 GLN A 229 GLY A 234 -1 O GLN A 229 N ALA A 223 SHEET 3 AA1 7 GLN A 190 LYS A 195 -1 N ILE A 192 O VAL A 232 SHEET 4 AA1 7 MET A 254 GLN A 260 -1 O LEU A 256 N VAL A 193 SHEET 5 AA1 7 TRP B 74 VAL B 80 -1 O LYS B 79 N LEU A 256 SHEET 6 AA1 7 ASN B 83C SER B 89 -1 O ILE B 87 N MET B 76 SHEET 7 AA1 7 LEU B 95 SER B 96 -1 O SER B 96 N LYS B 88 SHEET 1 AA2 3 VAL B 63 CYS B 70 0 SHEET 2 AA2 3 CYS B 54 LYS B 60 -1 N MET B 58 O GLN B 65 SHEET 3 AA2 3 TRP B 103 LYS B 109 -1 O LYS B 108 N PHE B 55 SHEET 1 AA3 7 VAL C 217 ALA C 223 0 SHEET 2 AA3 7 GLN C 229 GLY C 234 -1 O GLN C 229 N ALA C 223 SHEET 3 AA3 7 GLN C 190 LYS C 195 -1 N ILE C 192 O VAL C 232 SHEET 4 AA3 7 MET C 254 GLN C 260 -1 O LEU C 256 N VAL C 193 SHEET 5 AA3 7 TRP D 74 VAL D 80 -1 O LYS D 79 N LEU C 256 SHEET 6 AA3 7 ASN D 83C SER D 89 -1 O ILE D 87 N MET D 76 SHEET 7 AA3 7 LEU D 95 SER D 96 -1 O SER D 96 N LYS D 88 SHEET 1 AA4 3 VAL D 63 CYS D 70 0 SHEET 2 AA4 3 CYS D 54 LYS D 60 -1 N MET D 58 O GLN D 65 SHEET 3 AA4 3 TRP D 103 LYS D 109 -1 O LYS D 108 N PHE D 55 SSBOND 1 CYS B 54 CYS B 93 1555 1555 2.10 SSBOND 2 CYS D 54 CYS D 93 1555 1555 2.09 CRYST1 37.090 87.130 103.840 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026961 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009630 0.00000 CONECT 796 1129 CONECT 1129 796 CONECT 2139 2472 CONECT 2472 2139 MASTER 364 0 0 6 20 0 0 6 2861 4 4 30 END