HEADER CELL ADHESION 28-FEB-18 6FUY TITLE CRYSTAL STRUCTURE OF HUMAN FULL-LENGTH VINCULIN-T12-A974K (RESIDUES 1- TITLE 2 1066) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VINCULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: METAVINCULIN,MV; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VCL; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MECHANOSENSITIVE SELF-INHIBITION ADAPTER, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR D.S.CHOREV,T.VOLBERG,A.LIVNE,M.EISENSTEIN,B.MARTINS,Z.KAM, AUTHOR 2 B.M.JOCKUSCH,O.MEDALIA,M.SHARON,B.GEIGER REVDAT 2 17-JAN-24 6FUY 1 REMARK REVDAT 1 14-MAR-18 6FUY 0 SPRSDE 14-MAR-18 6FUY 6FMM JRNL AUTH D.S.CHOREV,T.VOLBERG,A.LIVNE,M.EISENSTEIN,B.MARTINS,Z.KAM, JRNL AUTH 2 B.M.JOCKUSCH,O.MEDALIA,M.SHARON,B.GEIGER JRNL TITL CONFORMATIONAL STATES DURING VINCULIN UNLOCKING JRNL TITL 2 DIFFERENTIALLY REGULATE FOCAL ADHESION PROPERTIES. JRNL REF SCI REP V. 8 2693 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29426917 JRNL DOI 10.1038/S41598-018-21006-8 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 26202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.267 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9102 - 6.1845 1.00 2974 157 0.2099 0.2467 REMARK 3 2 6.1845 - 4.9334 1.00 2864 151 0.2854 0.3424 REMARK 3 3 4.9334 - 4.3170 1.00 2803 147 0.2239 0.2329 REMARK 3 4 4.3170 - 3.9256 1.00 2785 147 0.2563 0.2792 REMARK 3 5 3.9256 - 3.6461 0.93 2606 137 0.3461 0.4324 REMARK 3 6 3.6461 - 3.4323 0.92 2568 135 0.3563 0.3959 REMARK 3 7 3.4323 - 3.2612 1.00 2732 144 0.3273 0.3961 REMARK 3 8 3.2612 - 3.1198 1.00 2797 147 0.3355 0.3817 REMARK 3 9 3.1198 - 3.0001 1.00 2762 146 0.3580 0.3905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7445 REMARK 3 ANGLE : 0.558 10039 REMARK 3 CHIRALITY : 0.035 1179 REMARK 3 PLANARITY : 0.004 1312 REMARK 3 DIHEDRAL : 13.828 4692 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 918 THROUGH 1066 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5207 -35.8700 -20.5451 REMARK 3 T TENSOR REMARK 3 T11: 0.2721 T22: 1.0571 REMARK 3 T33: 0.7355 T12: -0.1922 REMARK 3 T13: 0.0017 T23: -0.3002 REMARK 3 L TENSOR REMARK 3 L11: 0.0772 L22: 0.4752 REMARK 3 L33: 0.4808 L12: 0.1251 REMARK 3 L13: -0.1036 L23: -0.1390 REMARK 3 S TENSOR REMARK 3 S11: -0.3608 S12: 0.5577 S13: 0.0434 REMARK 3 S21: 0.2055 S22: 0.3361 S23: -0.3710 REMARK 3 S31: 0.1707 S32: 0.1124 S33: -0.0797 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1135 -40.7225 -18.3809 REMARK 3 T TENSOR REMARK 3 T11: 0.2861 T22: 0.4671 REMARK 3 T33: 0.4847 T12: -0.0386 REMARK 3 T13: 0.0637 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.4026 L22: 0.4848 REMARK 3 L33: 0.8614 L12: -0.3746 REMARK 3 L13: 0.2739 L23: 0.0901 REMARK 3 S TENSOR REMARK 3 S11: 0.0740 S12: 0.4169 S13: -0.1818 REMARK 3 S21: -0.1805 S22: 0.2852 S23: -0.0294 REMARK 3 S31: -0.3140 S32: -0.2379 S33: 0.0212 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 512 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4872 -9.5499 -7.3348 REMARK 3 T TENSOR REMARK 3 T11: 1.0163 T22: 1.0893 REMARK 3 T33: 0.8540 T12: -0.0565 REMARK 3 T13: -0.0994 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 0.6178 L22: 0.6632 REMARK 3 L33: 0.0061 L12: 0.6764 REMARK 3 L13: 0.0953 L23: -0.0548 REMARK 3 S TENSOR REMARK 3 S11: 0.1767 S12: -0.1970 S13: 0.2097 REMARK 3 S21: 0.4048 S22: -0.2415 S23: 0.2004 REMARK 3 S31: -0.3057 S32: -0.1204 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 513 THROUGH 917 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8129 -23.4719 13.2310 REMARK 3 T TENSOR REMARK 3 T11: 0.5212 T22: 0.4959 REMARK 3 T33: 0.5260 T12: -0.0735 REMARK 3 T13: 0.0710 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 0.6182 L22: 0.4504 REMARK 3 L33: 1.6339 L12: 0.0398 REMARK 3 L13: 0.1661 L23: -0.3110 REMARK 3 S TENSOR REMARK 3 S11: -0.0855 S12: 0.0504 S13: 0.0180 REMARK 3 S21: 0.2267 S22: 0.0660 S23: -0.0387 REMARK 3 S31: -0.1261 S32: 0.0457 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FUY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008968. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26203 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 19.85 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 19.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1TR2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, CALCIUM ACETATE, TRIS-HOAC, REMARK 280 15% ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.92333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 155.84667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 155.84667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.92333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 398 REMARK 465 ASN A 399 REMARK 465 GLY A 400 REMARK 465 GLY A 401 REMARK 465 ARG A 416 REMARK 465 LYS A 417 REMARK 465 ILE A 418 REMARK 465 ALA A 419 REMARK 465 GLU A 420 REMARK 465 LEU A 421 REMARK 465 CYS A 422 REMARK 465 ASP A 423 REMARK 465 ASP A 424 REMARK 465 PRO A 425 REMARK 465 LYS A 426 REMARK 465 GLU A 427 REMARK 465 ARG A 428 REMARK 465 ASP A 429 REMARK 465 ASP A 430 REMARK 465 ILE A 431 REMARK 465 LEU A 432 REMARK 465 ARG A 433 REMARK 465 SER A 434 REMARK 465 LEU A 435 REMARK 465 GLY A 436 REMARK 465 GLU A 437 REMARK 465 ILE A 438 REMARK 465 SER A 439 REMARK 465 ALA A 440 REMARK 465 LEU A 441 REMARK 465 THR A 442 REMARK 465 SER A 443 REMARK 465 LYS A 444 REMARK 465 LEU A 445 REMARK 465 ALA A 446 REMARK 465 ASP A 447 REMARK 465 LEU A 448 REMARK 465 ARG A 449 REMARK 465 ARG A 450 REMARK 465 GLN A 451 REMARK 465 GLY A 452 REMARK 465 LYS A 453 REMARK 465 GLY A 454 REMARK 465 ASP A 455 REMARK 465 SER A 456 REMARK 465 PRO A 457 REMARK 465 GLU A 458 REMARK 465 ALA A 459 REMARK 465 ARG A 460 REMARK 465 ALA A 461 REMARK 465 LEU A 462 REMARK 465 GLN A 836 REMARK 465 PRO A 837 REMARK 465 GLN A 838 REMARK 465 GLU A 839 REMARK 465 PRO A 840 REMARK 465 ASP A 841 REMARK 465 PHE A 842 REMARK 465 PRO A 843 REMARK 465 PRO A 844 REMARK 465 PRO A 845 REMARK 465 PRO A 846 REMARK 465 PRO A 847 REMARK 465 ASP A 848 REMARK 465 LEU A 849 REMARK 465 GLU A 850 REMARK 465 GLN A 851 REMARK 465 LEU A 852 REMARK 465 ARG A 853 REMARK 465 LEU A 854 REMARK 465 THR A 855 REMARK 465 ASP A 856 REMARK 465 GLU A 857 REMARK 465 LEU A 858 REMARK 465 ALA A 859 REMARK 465 PRO A 860 REMARK 465 PRO A 861 REMARK 465 LYS A 862 REMARK 465 PRO A 863 REMARK 465 PRO A 864 REMARK 465 LEU A 865 REMARK 465 PRO A 866 REMARK 465 GLU A 867 REMARK 465 GLY A 868 REMARK 465 GLU A 869 REMARK 465 VAL A 870 REMARK 465 PRO A 871 REMARK 465 PRO A 872 REMARK 465 PRO A 873 REMARK 465 ARG A 874 REMARK 465 PRO A 875 REMARK 465 PRO A 876 REMARK 465 PRO A 877 REMARK 465 PRO A 878 REMARK 465 GLU A 879 REMARK 465 GLY A 891 REMARK 465 GLU A 892 REMARK 465 VAL A 893 REMARK 465 ILE A 894 REMARK 465 ILE A 1048 REMARK 465 ARG A 1049 REMARK 465 THR A 1050 REMARK 465 ASP A 1051 REMARK 465 ALA A 1052 REMARK 465 GLY A 1053 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 VAL A 32 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 889 N CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 320 OG1 THR A 324 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 4 26.37 -143.35 REMARK 500 PRO A 38 -155.40 -74.41 REMARK 500 THR A 64 42.71 -109.23 REMARK 500 LYS A 219 50.54 -112.40 REMARK 500 ARG A 285 -6.93 -58.76 REMARK 500 ARG A 341 -161.94 -118.45 REMARK 500 VAL A 356 -70.14 -57.20 REMARK 500 GLU A 375 -70.66 -61.10 REMARK 500 ALA A 376 -30.89 -34.39 REMARK 500 LEU A 395 30.28 -87.23 REMARK 500 MET A 534 -75.27 -134.97 REMARK 500 PRO A 536 2.31 -67.30 REMARK 500 ALA A 559 -30.16 -132.57 REMARK 500 ILE A 744 74.60 57.02 REMARK 500 TRP A 912 -159.31 -112.14 REMARK 500 SER A 914 -74.66 -59.18 REMARK 500 LYS A 915 -155.98 -127.08 REMARK 500 SER A 941 91.46 -164.60 REMARK 500 LYS A 974 96.27 55.09 REMARK 500 ARG A1008 20.44 -70.77 REMARK 500 SER A1012 56.88 -156.84 REMARK 500 GLU A1014 14.37 -147.95 REMARK 500 THR A1055 -127.42 63.74 REMARK 500 TYR A1065 57.06 -151.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 1101 DBREF 6FUY A 1 1066 UNP P18206 VINC_HUMAN 1 1066 SEQADV 6FUY LYS A 974 UNP P18206 ASP 974 CONFLICT SEQADV 6FUY ALA A 975 UNP P18206 LYS 975 CONFLICT SEQADV 6FUY ALA A 976 UNP P18206 ARG 976 CONFLICT SEQADV 6FUY ALA A 978 UNP P18206 ARG 978 CONFLICT SEQRES 1 A 1066 MET PRO VAL PHE HIS THR ARG THR ILE GLU SER ILE LEU SEQRES 2 A 1066 GLU PRO VAL ALA GLN GLN ILE SER HIS LEU VAL ILE MET SEQRES 3 A 1066 HIS GLU GLU GLY GLU VAL ASP GLY LYS ALA ILE PRO ASP SEQRES 4 A 1066 LEU THR ALA PRO VAL ALA ALA VAL GLN ALA ALA VAL SER SEQRES 5 A 1066 ASN LEU VAL ARG VAL GLY LYS GLU THR VAL GLN THR THR SEQRES 6 A 1066 GLU ASP GLN ILE LEU LYS ARG ASP MET PRO PRO ALA PHE SEQRES 7 A 1066 ILE LYS VAL GLU ASN ALA CYS THR LYS LEU VAL GLN ALA SEQRES 8 A 1066 ALA GLN MET LEU GLN SER ASP PRO TYR SER VAL PRO ALA SEQRES 9 A 1066 ARG ASP TYR LEU ILE ASP GLY SER ARG GLY ILE LEU SER SEQRES 10 A 1066 GLY THR SER ASP LEU LEU LEU THR PHE ASP GLU ALA GLU SEQRES 11 A 1066 VAL ARG LYS ILE ILE ARG VAL CYS LYS GLY ILE LEU GLU SEQRES 12 A 1066 TYR LEU THR VAL ALA GLU VAL VAL GLU THR MET GLU ASP SEQRES 13 A 1066 LEU VAL THR TYR THR LYS ASN LEU GLY PRO GLY MET THR SEQRES 14 A 1066 LYS MET ALA LYS MET ILE ASP GLU ARG GLN GLN GLU LEU SEQRES 15 A 1066 THR HIS GLN GLU HIS ARG VAL MET LEU VAL ASN SER MET SEQRES 16 A 1066 ASN THR VAL LYS GLU LEU LEU PRO VAL LEU ILE SER ALA SEQRES 17 A 1066 MET LYS ILE PHE VAL THR THR LYS ASN SER LYS ASN GLN SEQRES 18 A 1066 GLY ILE GLU GLU ALA LEU LYS ASN ARG ASN PHE THR VAL SEQRES 19 A 1066 GLU LYS MET SER ALA GLU ILE ASN GLU ILE ILE ARG VAL SEQRES 20 A 1066 LEU GLN LEU THR SER TRP ASP GLU ASP ALA TRP ALA SER SEQRES 21 A 1066 LYS ASP THR GLU ALA MET LYS ARG ALA LEU ALA SER ILE SEQRES 22 A 1066 ASP SER LYS LEU ASN GLN ALA LYS GLY TRP LEU ARG ASP SEQRES 23 A 1066 PRO SER ALA SER PRO GLY ASP ALA GLY GLU GLN ALA ILE SEQRES 24 A 1066 ARG GLN ILE LEU ASP GLU ALA GLY LYS VAL GLY GLU LEU SEQRES 25 A 1066 CYS ALA GLY LYS GLU ARG ARG GLU ILE LEU GLY THR CYS SEQRES 26 A 1066 LYS MET LEU GLY GLN MET THR ASP GLN VAL ALA ASP LEU SEQRES 27 A 1066 ARG ALA ARG GLY GLN GLY SER SER PRO VAL ALA MET GLN SEQRES 28 A 1066 LYS ALA GLN GLN VAL SER GLN GLY LEU ASP VAL LEU THR SEQRES 29 A 1066 ALA LYS VAL GLU ASN ALA ALA ARG LYS LEU GLU ALA MET SEQRES 30 A 1066 THR ASN SER LYS GLN SER ILE ALA LYS LYS ILE ASP ALA SEQRES 31 A 1066 ALA GLN ASN TRP LEU ALA ASP PRO ASN GLY GLY PRO GLU SEQRES 32 A 1066 GLY GLU GLU GLN ILE ARG GLY ALA LEU ALA GLU ALA ARG SEQRES 33 A 1066 LYS ILE ALA GLU LEU CYS ASP ASP PRO LYS GLU ARG ASP SEQRES 34 A 1066 ASP ILE LEU ARG SER LEU GLY GLU ILE SER ALA LEU THR SEQRES 35 A 1066 SER LYS LEU ALA ASP LEU ARG ARG GLN GLY LYS GLY ASP SEQRES 36 A 1066 SER PRO GLU ALA ARG ALA LEU ALA LYS GLN VAL ALA THR SEQRES 37 A 1066 ALA LEU GLN ASN LEU GLN THR LYS THR ASN ARG ALA VAL SEQRES 38 A 1066 ALA ASN SER ARG PRO ALA LYS ALA ALA VAL HIS LEU GLU SEQRES 39 A 1066 GLY LYS ILE GLU GLN ALA GLN ARG TRP ILE ASP ASN PRO SEQRES 40 A 1066 THR VAL ASP ASP ARG GLY VAL GLY GLN ALA ALA ILE ARG SEQRES 41 A 1066 GLY LEU VAL ALA GLU GLY HIS ARG LEU ALA ASN VAL MET SEQRES 42 A 1066 MET GLY PRO TYR ARG GLN ASP LEU LEU ALA LYS CYS ASP SEQRES 43 A 1066 ARG VAL ASP GLN LEU THR ALA GLN LEU ALA ASP LEU ALA SEQRES 44 A 1066 ALA ARG GLY GLU GLY GLU SER PRO GLN ALA ARG ALA LEU SEQRES 45 A 1066 ALA SER GLN LEU GLN ASP SER LEU LYS ASP LEU LYS ALA SEQRES 46 A 1066 ARG MET GLN GLU ALA MET THR GLN GLU VAL SER ASP VAL SEQRES 47 A 1066 PHE SER ASP THR THR THR PRO ILE LYS LEU LEU ALA VAL SEQRES 48 A 1066 ALA ALA THR ALA PRO PRO ASP ALA PRO ASN ARG GLU GLU SEQRES 49 A 1066 VAL PHE ASP GLU ARG ALA ALA ASN PHE GLU ASN HIS SER SEQRES 50 A 1066 GLY LYS LEU GLY ALA THR ALA GLU LYS ALA ALA ALA VAL SEQRES 51 A 1066 GLY THR ALA ASN LYS SER THR VAL GLU GLY ILE GLN ALA SEQRES 52 A 1066 SER VAL LYS THR ALA ARG GLU LEU THR PRO GLN VAL VAL SEQRES 53 A 1066 SER ALA ALA ARG ILE LEU LEU ARG ASN PRO GLY ASN GLN SEQRES 54 A 1066 ALA ALA TYR GLU HIS PHE GLU THR MET LYS ASN GLN TRP SEQRES 55 A 1066 ILE ASP ASN VAL GLU LYS MET THR GLY LEU VAL ASP GLU SEQRES 56 A 1066 ALA ILE ASP THR LYS SER LEU LEU ASP ALA SER GLU GLU SEQRES 57 A 1066 ALA ILE LYS LYS ASP LEU ASP LYS CYS LYS VAL ALA MET SEQRES 58 A 1066 ALA ASN ILE GLN PRO GLN MET LEU VAL ALA GLY ALA THR SEQRES 59 A 1066 SER ILE ALA ARG ARG ALA ASN ARG ILE LEU LEU VAL ALA SEQRES 60 A 1066 LYS ARG GLU VAL GLU ASN SER GLU ASP PRO LYS PHE ARG SEQRES 61 A 1066 GLU ALA VAL LYS ALA ALA SER ASP GLU LEU SER LYS THR SEQRES 62 A 1066 ILE SER PRO MET VAL MET ASP ALA LYS ALA VAL ALA GLY SEQRES 63 A 1066 ASN ILE SER ASP PRO GLY LEU GLN LYS SER PHE LEU ASP SEQRES 64 A 1066 SER GLY TYR ARG ILE LEU GLY ALA VAL ALA LYS VAL ARG SEQRES 65 A 1066 GLU ALA PHE GLN PRO GLN GLU PRO ASP PHE PRO PRO PRO SEQRES 66 A 1066 PRO PRO ASP LEU GLU GLN LEU ARG LEU THR ASP GLU LEU SEQRES 67 A 1066 ALA PRO PRO LYS PRO PRO LEU PRO GLU GLY GLU VAL PRO SEQRES 68 A 1066 PRO PRO ARG PRO PRO PRO PRO GLU GLU LYS ASP GLU GLU SEQRES 69 A 1066 PHE PRO GLU GLN LYS ALA GLY GLU VAL ILE ASN GLN PRO SEQRES 70 A 1066 MET MET MET ALA ALA ARG GLN LEU HIS ASP GLU ALA ARG SEQRES 71 A 1066 LYS TRP SER SER LYS GLY ASN ASP ILE ILE ALA ALA ALA SEQRES 72 A 1066 LYS ARG MET ALA LEU LEU MET ALA GLU MET SER ARG LEU SEQRES 73 A 1066 VAL ARG GLY GLY SER GLY THR LYS ARG ALA LEU ILE GLN SEQRES 74 A 1066 CYS ALA LYS ASP ILE ALA LYS ALA SER ASP GLU VAL THR SEQRES 75 A 1066 ARG LEU ALA LYS GLU VAL ALA LYS GLN CYS THR LYS ALA SEQRES 76 A 1066 ALA ILE ALA THR ASN LEU LEU GLN VAL CYS GLU ARG ILE SEQRES 77 A 1066 PRO THR ILE SER THR GLN LEU LYS ILE LEU SER THR VAL SEQRES 78 A 1066 LYS ALA THR MET LEU GLY ARG THR ASN ILE SER ASP GLU SEQRES 79 A 1066 GLU SER GLU GLN ALA THR GLU MET LEU VAL HIS ASN ALA SEQRES 80 A 1066 GLN ASN LEU MET GLN SER VAL LYS GLU THR VAL ARG GLU SEQRES 81 A 1066 ALA GLU ALA ALA SER ILE LYS ILE ARG THR ASP ALA GLY SEQRES 82 A 1066 PHE THR LEU ARG TRP VAL ARG LYS THR PRO TRP TYR GLN HET CA A1101 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *5(H2 O) HELIX 1 AA1 THR A 6 VAL A 32 1 27 HELIX 2 AA2 LEU A 40 THR A 64 1 25 HELIX 3 AA3 ASP A 67 MET A 74 1 8 HELIX 4 AA4 MET A 74 ASP A 98 1 25 HELIX 5 AA5 SER A 101 VAL A 147 1 47 HELIX 6 AA6 ALA A 148 VAL A 151 5 4 HELIX 7 AA7 THR A 153 GLU A 181 1 29 HELIX 8 AA8 HIS A 184 SER A 218 1 35 HELIX 9 AA9 GLY A 222 GLN A 249 1 28 HELIX 10 AB1 ASP A 256 ARG A 285 1 30 HELIX 11 AB2 ASP A 293 GLN A 301 1 9 HELIX 12 AB3 GLN A 301 GLU A 311 1 11 HELIX 13 AB4 GLU A 317 ALA A 340 1 24 HELIX 14 AB5 SER A 346 LYS A 386 1 41 HELIX 15 AB6 ILE A 388 LEU A 395 1 8 HELIX 16 AB7 GLY A 404 ALA A 415 1 12 HELIX 17 AB8 LYS A 464 ARG A 485 1 22 HELIX 18 AB9 HIS A 492 ASP A 505 1 14 HELIX 19 AC1 ARG A 512 ASN A 531 1 20 HELIX 20 AC2 GLY A 535 LEU A 542 1 8 HELIX 21 AC3 ALA A 543 ARG A 561 1 19 HELIX 22 AC4 SER A 566 ALA A 571 1 6 HELIX 23 AC5 LEU A 572 PHE A 599 1 28 HELIX 24 AC6 THR A 603 THR A 614 1 12 HELIX 25 AC7 ASN A 621 GLY A 651 1 31 HELIX 26 AC8 ASN A 654 ASN A 685 1 32 HELIX 27 AC9 ASN A 688 ALA A 716 1 29 HELIX 28 AD1 ASP A 718 ASN A 743 1 26 HELIX 29 AD2 GLN A 745 GLU A 772 1 28 HELIX 30 AD3 ASP A 776 GLU A 781 1 6 HELIX 31 AD4 VAL A 783 THR A 793 1 11 HELIX 32 AD5 THR A 793 ALA A 805 1 13 HELIX 33 AD6 ASP A 810 PHE A 835 1 26 HELIX 34 AD7 GLN A 896 ARG A 910 1 15 HELIX 35 AD8 ASN A 917 ARG A 938 1 22 HELIX 36 AD9 THR A 943 LYS A 970 1 28 HELIX 37 AE1 LYS A 974 ARG A 987 1 14 HELIX 38 AE2 ILE A 988 MET A 1005 1 18 HELIX 39 AE3 GLU A 1014 ALA A 1044 1 31 SITE 1 AC1 1 ASP A 800 CRYST1 97.810 97.810 233.770 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010224 0.005903 0.000000 0.00000 SCALE2 0.000000 0.011806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004278 0.00000