HEADER HYDROLASE 09-MAR-18 6FXP TITLE CRYSTAL STRUCTURE OF S. AUREUS GLUCOSAMINIDASE B COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 GENE: SAV1775; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LYSOZYME-LIKE FOLD, N-ACETYLGLUCOSAMINIDASE, PEPTIDOGLYCAN HYDROLASE, KEYWDS 2 GH73, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.PINTAR,D.TURK REVDAT 3 08-MAY-24 6FXP 1 REMARK REVDAT 2 30-SEP-20 6FXP 1 JRNL LINK REVDAT 1 20-MAR-19 6FXP 0 JRNL AUTH S.PINTAR,J.BORISEK,A.USENIK,A.PERDIH,D.TURK JRNL TITL DOMAIN SLIDING OF TWO STAPHYLOCOCCUS AUREUS JRNL TITL 2 N-ACETYLGLUCOSAMINIDASES ENABLES THEIR SUBSTRATE-BINDING JRNL TITL 3 PRIOR TO ITS CATALYSIS. JRNL REF COMMUN BIOL V. 3 178 2020 JRNL REFN ESSN 2399-3642 JRNL PMID 32313083 JRNL DOI 10.1038/S42003-020-0911-7 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : MAIN REMARK 3 AUTHORS : TURK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 53814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NONE REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 100.00 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2544 REMARK 3 BIN R VALUE (WORKING SET) : 0.3029 REMARK 3 BIN FREE R VALUE : 0.3159 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4046 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 107 REMARK 3 SOLVENT ATOMS : 548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FXP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200008421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.894290 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 47.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA3 CITRATE, 45 % PEG 200, PH REMARK 280 4.75, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.83667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.67333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.25500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 102.09167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.41833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.83667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.67333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 102.09167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.25500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 20.41833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 749 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 846 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 871 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ASN A -2 REMARK 465 ALA A -1 REMARK 465 ALA A 0 REMARK 465 SER B 248 REMARK 465 ASN B 249 REMARK 465 ALA B 250 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 LYS B 288 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 36 CG OD1 ND2 REMARK 480 LYS A 37 CG CD CE NZ REMARK 480 LYS A 38 CG CD CE NZ REMARK 480 ASN A 39 CG OD1 ND2 REMARK 480 GLU A 63 CG CD OE1 OE2 REMARK 480 LYS A 80 NZ REMARK 480 LYS A 102 NZ REMARK 480 LYS A 162 CG CD CE NZ REMARK 480 LYS A 227 NZ REMARK 480 LYS A 246 CG CD CE NZ REMARK 480 LYS A 250 CG CD CE NZ REMARK 480 ASN B 287 CG OD1 ND2 REMARK 480 LYS B 289 CG CD CE NZ REMARK 480 ASN B 290 CG OD1 ND2 REMARK 480 ASP B 291 CG OD1 OD2 REMARK 480 LYS B 331 NZ REMARK 480 LYS B 406 CE NZ REMARK 480 LYS B 497 CG CD CE NZ REMARK 480 ASN B 500 CG OD1 ND2 REMARK 480 LYS B 501 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 49.00 -81.07 REMARK 500 ASN A 39 176.64 52.13 REMARK 500 ASP A 40 40.74 38.57 REMARK 500 ALA A 41 77.41 -150.56 REMARK 500 ASP A 55 81.92 -68.00 REMARK 500 HIS A 108 68.39 63.33 REMARK 500 ALA A 124 -122.36 40.41 REMARK 500 ILE A 135 119.62 -160.62 REMARK 500 LYS A 138 -174.09 -68.35 REMARK 500 ASN A 199 58.89 36.28 REMARK 500 LYS A 246 -19.89 -48.37 REMARK 500 ASN A 249 -66.64 -99.62 REMARK 500 ASN B 266 42.00 -75.27 REMARK 500 LYS B 288 -62.73 177.99 REMARK 500 ALA B 292 68.70 -177.03 REMARK 500 HIS B 359 65.86 63.01 REMARK 500 ALA B 375 -115.92 21.58 REMARK 500 ASP B 403 64.05 -159.37 REMARK 500 ASN B 450 54.23 30.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 993 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B 994 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B 995 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH B 996 DISTANCE = 6.69 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 26 O REMARK 620 2 TYR A 29 O 107.6 REMARK 620 3 ILE B 277 O 50.0 65.8 REMARK 620 4 TYR B 280 O 48.6 65.6 2.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 604 DBREF1 6FXP A 2 250 UNP A0A0H3JSV1_STAAM DBREF2 6FXP A A0A0H3JSV1 36 284 DBREF1 6FXP B 253 501 UNP A0A0H3JSV1_STAAM DBREF2 6FXP B A0A0H3JSV1 36 284 SEQADV 6FXP SER A -3 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ASN A -2 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA A -1 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA A 0 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA A 1 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP SER B 248 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ASN B 249 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA B 250 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA B 251 UNP A0A0H3JSV EXPRESSION TAG SEQADV 6FXP ALA B 252 UNP A0A0H3JSV EXPRESSION TAG SEQRES 1 A 254 SER ASN ALA ALA ALA PHE LYS HIS VAL LYS SER ASP ILE SEQRES 2 A 254 LYS ILE GLU LYS LEU ASN VAL THR LEU ASN ASP ALA ALA SEQRES 3 A 254 LYS LYS GLN ILE ASN ASN TYR THR SER GLN GLN VAL SER SEQRES 4 A 254 ASN LYS LYS ASN ASP ALA TRP ARG ASP ALA SER ALA THR SEQRES 5 A 254 GLU ILE LYS SER ALA MET ASP SER GLY THR PHE ILE ASP SEQRES 6 A 254 ASN GLU LYS GLN LYS TYR GLN PHE LEU ASP LEU SER LYS SEQRES 7 A 254 TYR GLN GLY ILE ASP LYS ASN ARG ILE LYS CYS MET LEU SEQRES 8 A 254 VAL ASP ARG PRO THR LEU LEU LYS HIS THR ASP ASP PHE SEQRES 9 A 254 LEU LYS ALA ALA LYS ASP LYS HIS VAL ASN GLU VAL TYR SEQRES 10 A 254 LEU ILE SER HIS ALA LEU LEU GLU THR GLY ALA VAL LYS SEQRES 11 A 254 SER GLU LEU ALA ASN GLY VAL GLU ILE ASP GLY LYS LYS SEQRES 12 A 254 TYR TYR ASN PHE TYR GLY VAL GLY ALA LEU ASP LYS ASP SEQRES 13 A 254 PRO ILE LYS THR GLY ALA GLU TYR ALA LYS LYS HIS GLY SEQRES 14 A 254 TRP ASP THR PRO GLU LYS ALA ILE SER GLY GLY ALA ASP SEQRES 15 A 254 PHE ILE HIS LYS HIS PHE LEU SER SER THR ASP GLN ASN SEQRES 16 A 254 THR LEU TYR SER MET ARG TRP ASN PRO LYS ASN PRO GLY SEQRES 17 A 254 GLU HIS GLN TYR ALA THR ASP ILE LYS TRP ALA GLU SER SEQRES 18 A 254 ASN ALA THR ILE ILE ALA ASP PHE TYR LYS ASN MET LYS SEQRES 19 A 254 THR GLU GLY LYS TYR PHE LYS TYR PHE VAL TYR LYS ASP SEQRES 20 A 254 ASP SER LYS HIS LEU ASN LYS SEQRES 1 B 254 SER ASN ALA ALA ALA PHE LYS HIS VAL LYS SER ASP ILE SEQRES 2 B 254 LYS ILE GLU LYS LEU ASN VAL THR LEU ASN ASP ALA ALA SEQRES 3 B 254 LYS LYS GLN ILE ASN ASN TYR THR SER GLN GLN VAL SER SEQRES 4 B 254 ASN LYS LYS ASN ASP ALA TRP ARG ASP ALA SER ALA THR SEQRES 5 B 254 GLU ILE LYS SER ALA MET ASP SER GLY THR PHE ILE ASP SEQRES 6 B 254 ASN GLU LYS GLN LYS TYR GLN PHE LEU ASP LEU SER LYS SEQRES 7 B 254 TYR GLN GLY ILE ASP LYS ASN ARG ILE LYS CYS MET LEU SEQRES 8 B 254 VAL ASP ARG PRO THR LEU LEU LYS HIS THR ASP ASP PHE SEQRES 9 B 254 LEU LYS ALA ALA LYS ASP LYS HIS VAL ASN GLU VAL TYR SEQRES 10 B 254 LEU ILE SER HIS ALA LEU LEU GLU THR GLY ALA VAL LYS SEQRES 11 B 254 SER GLU LEU ALA ASN GLY VAL GLU ILE ASP GLY LYS LYS SEQRES 12 B 254 TYR TYR ASN PHE TYR GLY VAL GLY ALA LEU ASP LYS ASP SEQRES 13 B 254 PRO ILE LYS THR GLY ALA GLU TYR ALA LYS LYS HIS GLY SEQRES 14 B 254 TRP ASP THR PRO GLU LYS ALA ILE SER GLY GLY ALA ASP SEQRES 15 B 254 PHE ILE HIS LYS HIS PHE LEU SER SER THR ASP GLN ASN SEQRES 16 B 254 THR LEU TYR SER MET ARG TRP ASN PRO LYS ASN PRO GLY SEQRES 17 B 254 GLU HIS GLN TYR ALA THR ASP ILE LYS TRP ALA GLU SER SEQRES 18 B 254 ASN ALA THR ILE ILE ALA ASP PHE TYR LYS ASN MET LYS SEQRES 19 B 254 THR GLU GLY LYS TYR PHE LYS TYR PHE VAL TYR LYS ASP SEQRES 20 B 254 ASP SER LYS HIS LEU ASN LYS HET PG4 A 301 13 HET PG4 A 302 13 HET CL A 303 1 HET NA A 304 1 HET PG4 A 305 13 HET PG4 A 306 13 HET PG4 A 307 13 HET PG4 B 601 13 HET CL B 602 1 HET PG4 B 603 13 HET PG4 B 604 13 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 3 PG4 8(C8 H18 O5) FORMUL 5 CL 2(CL 1-) FORMUL 6 NA NA 1+ FORMUL 14 HOH *548(H2 O) HELIX 1 AA1 THR A 17 TYR A 29 1 13 HELIX 2 AA2 SER A 46 MET A 54 1 9 HELIX 3 AA3 ASP A 55 ASP A 61 1 7 HELIX 4 AA4 LYS A 64 LEU A 70 5 7 HELIX 5 AA5 ASP A 79 LYS A 84 1 6 HELIX 6 AA6 ARG A 90 LYS A 95 1 6 HELIX 7 AA7 HIS A 96 HIS A 108 1 13 HELIX 8 AA8 ASN A 110 LEU A 120 1 11 HELIX 9 AA9 GLU A 121 THR A 122 5 2 HELIX 10 AB1 GLY A 123 VAL A 125 5 3 HELIX 11 AB2 LYS A 126 GLY A 132 1 7 HELIX 12 AB3 ASP A 152 HIS A 164 1 13 HELIX 13 AB4 THR A 168 LEU A 185 1 18 HELIX 14 AB5 THR A 192 ASN A 199 1 8 HELIX 15 AB6 LYS A 213 MET A 229 1 17 HELIX 16 AB7 ASP A 244 ASN A 249 1 6 HELIX 17 AB8 THR B 268 TYR B 280 1 13 HELIX 18 AB9 SER B 297 ASP B 306 1 10 HELIX 19 AC1 ASP B 306 ASP B 312 1 7 HELIX 20 AC2 LYS B 315 LEU B 321 5 7 HELIX 21 AC3 ASP B 330 VAL B 339 1 10 HELIX 22 AC4 ARG B 341 LYS B 346 1 6 HELIX 23 AC5 HIS B 347 HIS B 359 1 13 HELIX 24 AC6 ASN B 361 THR B 373 1 13 HELIX 25 AC7 LYS B 377 GLY B 383 1 7 HELIX 26 AC8 ASP B 403 HIS B 415 1 13 HELIX 27 AC9 THR B 419 LEU B 436 1 18 HELIX 28 AD1 THR B 443 ASN B 450 1 8 HELIX 29 AD2 LYS B 464 MET B 480 1 17 HELIX 30 AD3 ASP B 495 ASN B 500 1 6 SHEET 1 AA1 4 TYR A 235 TYR A 241 0 SHEET 2 AA1 4 SER A 7 LEU A 14 1 N GLU A 12 O TYR A 238 SHEET 3 AA1 4 ASP B 259 LYS B 264 -1 O ILE B 260 N ILE A 9 SHEET 4 AA1 4 TYR B 486 VAL B 491 1 O TYR B 489 N GLU B 263 SHEET 1 AA2 2 GLN A 33 SER A 35 0 SHEET 2 AA2 2 TRP A 42 ASP A 44 -1 O ARG A 43 N VAL A 34 SHEET 1 AA3 2 VAL A 133 ILE A 135 0 SHEET 2 AA3 2 LYS A 138 TYR A 140 -1 O TYR A 140 N VAL A 133 SHEET 1 AA4 2 GLN B 284 SER B 286 0 SHEET 2 AA4 2 TRP B 293 ASP B 295 -1 O ARG B 294 N VAL B 285 SHEET 1 AA5 2 VAL B 384 ILE B 386 0 SHEET 2 AA5 2 LYS B 389 TYR B 391 -1 O LYS B 389 N ILE B 386 LINK O ILE A 26 NA NA A 304 1555 1555 2.04 LINK O TYR A 29 NA NA A 304 1555 1555 2.18 LINK NA NA A 304 O ILE B 277 6555 1555 2.23 LINK NA NA A 304 O TYR B 280 6555 1555 2.28 SITE 1 AC1 11 TYR A 160 GLY A 175 ASP A 178 PHE A 179 SITE 2 AC1 11 LYS A 182 GLN A 190 GLU A 205 HIS A 206 SITE 3 AC1 11 TYR A 208 HOH A 450 HOH A 568 SITE 1 AC2 9 ALA A 47 THR A 48 HOH A 417 HOH A 437 SITE 2 AC2 9 HOH A 465 LYS B 274 ALA B 298 THR B 299 SITE 3 AC2 9 HOH B 750 SITE 1 AC3 4 ASP A 189 ASN A 191 SER A 195 LYS A 237 SITE 1 AC4 4 ILE A 26 TYR A 29 ILE B 277 TYR B 280 SITE 1 AC5 9 ASP A 8 LYS A 10 ASP A 71 LYS A 74 SITE 2 AC5 9 TYR A 75 TYR A 235 PHE A 236 ASP B 259 SITE 3 AC5 9 PG4 B 603 SITE 1 AC6 8 THR A 30 HIS A 206 GLN A 207 TYR A 208 SITE 2 AC6 8 HOH A 440 HOH A 456 HOH A 474 PG4 B 601 SITE 1 AC7 5 LEU A 18 ASN A 19 LYS A 51 SER A 52 SITE 2 AC7 5 HOH A 430 SITE 1 AC8 5 SER A 31 PG4 A 306 ASP B 387 LYS B 413 SITE 2 AC8 5 HOH B 724 SITE 1 AC9 6 ASP B 440 GLN B 441 ASN B 442 SER B 446 SITE 2 AC9 6 LYS B 488 PHE B 490 SITE 1 AD1 9 ASP A 8 PG4 A 305 ASP B 259 LYS B 261 SITE 2 AD1 9 ASP B 322 LYS B 325 TYR B 486 PHE B 487 SITE 3 AD1 9 HOH B 841 SITE 1 AD2 4 SER B 286 GLU B 300 LYS B 464 GLU B 467 CRYST1 151.770 151.770 122.510 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006589 0.003804 0.000000 0.00000 SCALE2 0.000000 0.007608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008163 0.00000