HEADER VIRAL PROTEIN 12-MAR-18 6FYW TITLE STRUCTURE OF B/BRISBANE/60/2008 INFLUENZA HEMAGGLUTININ IN COMPLEX TITLE 2 WITH SD83 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SINGLE DOMAIN ANTIBODY SD83; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: COMPND 14 EVQLVESGGGLVQPGGSLRLSCAATGFTLENKAIGWFRQTPGSEREGVLCISKSGSWTYYTDSMRGRFT COMPND 15 ISRDNAENTVYLQMDSLKPEDTAVYYCATTTAGGGLCWDGTTFSRLASSWGQGTQVTVSS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA B VIRUS (B/BRISBANE/60/2008); SOURCE 3 ORGANISM_TAXID: 604436; SOURCE 4 GENE: HA; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: INFLUENZA B VIRUS (B/BRISBANE/60/2008); SOURCE 9 ORGANISM_TAXID: 604436; SOURCE 10 GENE: HA; SOURCE 11 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 15 ORGANISM_TAXID: 9844; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: EXPI293F KEYWDS INFLUENZA, SINGLE DOMAIN ANTIBODY, HEMAGGLUTININ, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.S.LAURSEN,I.A.WILSON REVDAT 4 17-JAN-24 6FYW 1 HETSYN LINK REVDAT 3 29-JUL-20 6FYW 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 14-NOV-18 6FYW 1 JRNL REVDAT 1 07-NOV-18 6FYW 0 JRNL AUTH N.S.LAURSEN,R.H.E.FRIESEN,X.ZHU,M.JONGENEELEN,S.BLOKLAND, JRNL AUTH 2 J.VERMOND,A.VAN EIJGEN,C.TANG,H.VAN DIEPEN,G.OBMOLOVA, JRNL AUTH 3 M.VAN DER NEUT KOLFSCHOTEN,D.ZUIJDGEEST,R.STRAETEMANS, JRNL AUTH 4 R.M.B.HOFFMAN,T.NIEUSMA,J.PALLESEN,H.L.TURNER,S.M.BERNARD, JRNL AUTH 5 A.B.WARD,J.LUO,L.L.M.POON,A.P.TRETIAKOVA,J.M.WILSON, JRNL AUTH 6 M.P.LIMBERIS,R.VOGELS,B.BRANDENBURG,J.A.KOLKMAN,I.A.WILSON JRNL TITL UNIVERSAL PROTECTION AGAINST INFLUENZA INFECTION BY A JRNL TITL 2 MULTIDOMAIN ANTIBODY TO INFLUENZA HEMAGGLUTININ. JRNL REF SCIENCE V. 362 598 2018 JRNL REFN ESSN 1095-9203 JRNL PMID 30385580 JRNL DOI 10.1126/SCIENCE.AAQ0620 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2614: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 56741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1742 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2709 - 5.0354 0.98 4653 153 0.2078 0.2306 REMARK 3 2 5.0354 - 3.9974 1.00 4628 143 0.1567 0.1754 REMARK 3 3 3.9974 - 3.4923 1.00 4606 142 0.1715 0.1702 REMARK 3 4 3.4923 - 3.1731 1.00 4589 145 0.1782 0.2030 REMARK 3 5 3.1731 - 2.9457 1.00 4603 144 0.1939 0.2554 REMARK 3 6 2.9457 - 2.7720 1.00 4565 144 0.2020 0.2378 REMARK 3 7 2.7720 - 2.6332 1.00 4545 145 0.1981 0.2119 REMARK 3 8 2.6332 - 2.5186 1.00 4522 146 0.2129 0.2652 REMARK 3 9 2.5186 - 2.4216 1.00 4592 148 0.2179 0.2346 REMARK 3 10 2.4216 - 2.3381 1.00 4577 140 0.2382 0.2870 REMARK 3 11 2.3381 - 2.2650 1.00 4570 143 0.2460 0.2864 REMARK 3 12 2.2650 - 2.2002 1.00 4549 149 0.2507 0.2754 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4766 REMARK 3 ANGLE : 0.612 6502 REMARK 3 CHIRALITY : 0.044 793 REMARK 3 PLANARITY : 0.004 798 REMARK 3 DIHEDRAL : 11.571 2874 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FYW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200008983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0331 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56754 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FQM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.5 AND 10% PEG 20,000, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 94.52000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 94.52000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 94.52000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 94.52000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 94.52000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1057 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 748 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ARG A 2 REMARK 465 ILE A 3 REMARK 465 CYS A 4 REMARK 465 ALA A 338 REMARK 465 LYS A 339 REMARK 465 LEU A 340 REMARK 465 LEU A 341 REMARK 465 LYS A 342 REMARK 465 GLU A 343 REMARK 465 ARG A 344 REMARK 465 GLY B 348 REMARK 465 PHE B 349 REMARK 465 PHE B 350 REMARK 465 GLY B 351 REMARK 465 ALA B 352 REMARK 465 ILE B 353 REMARK 465 ALA B 354 REMARK 465 GLY B 355 REMARK 465 PHE B 356 REMARK 465 LEU B 357 REMARK 465 GLU B 358 REMARK 465 GLY B 359 REMARK 465 GLY B 360 REMARK 465 TRP B 361 REMARK 465 GLU B 362 REMARK 465 GLY B 363 REMARK 465 MET B 364 REMARK 465 ILE B 365 REMARK 465 ALA B 366 REMARK 465 GLY B 367 REMARK 465 SER B 373 REMARK 465 HIS B 374 REMARK 465 GLY B 375 REMARK 465 ALA B 376 REMARK 465 HIS B 377 REMARK 465 GLY B 378 REMARK 465 VAL B 379 REMARK 465 ALA B 380 REMARK 465 GLY B 481 REMARK 465 ASN B 482 REMARK 465 GLY B 483 REMARK 465 CYS B 484 REMARK 465 PHE B 485 REMARK 465 GLU B 486 REMARK 465 THR B 487 REMARK 465 LYS B 488 REMARK 465 HIS B 489 REMARK 465 LYS B 490 REMARK 465 CYS B 491 REMARK 465 ASN B 492 REMARK 465 GLN B 493 REMARK 465 THR B 494 REMARK 465 CYS B 495 REMARK 465 LEU B 496 REMARK 465 ASP B 497 REMARK 465 ARG B 498 REMARK 465 ILE B 499 REMARK 465 ALA B 500 REMARK 465 ALA B 501 REMARK 465 GLY B 502 REMARK 465 THR B 503 REMARK 465 PHE B 504 REMARK 465 ASP B 505 REMARK 465 ALA B 506 REMARK 465 GLY B 507 REMARK 465 GLU B 508 REMARK 465 PHE B 509 REMARK 465 SER B 510 REMARK 465 LEU B 511 REMARK 465 PRO B 512 REMARK 465 THR B 513 REMARK 465 PHE B 514 REMARK 465 ASP B 515 REMARK 465 SER B 516 REMARK 465 LEU B 517 REMARK 465 ASN B 518 REMARK 465 ILE B 519 REMARK 465 THR B 520 REMARK 465 ALA B 521 REMARK 465 ALA B 522 REMARK 465 SER B 523 REMARK 465 SER B 524 REMARK 465 GLY B 525 REMARK 465 ARG B 526 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 92 33.01 -145.29 REMARK 500 CYS A 94 -164.02 68.67 REMARK 500 ASP A 234 -167.31 -122.37 REMARK 500 GLN A 261 -135.00 -122.99 REMARK 500 GLN A 268 -90.41 -126.07 REMARK 500 GLU B 419 -44.09 70.89 REMARK 500 VAL C 48 -73.09 -121.54 REMARK 500 TRP C 100C -141.33 59.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1079 DISTANCE = 5.95 ANGSTROMS DBREF 6FYW A 1 344 UNP C0LT35 C0LT35_9INFB 16 362 DBREF 6FYW B 348 526 UNP C0LT35 C0LT35_9INFB 363 541 DBREF 6FYW C 1 113 PDB 6FYW 6FYW 1 113 SEQADV 6FYW SER B 524 UNP C0LT35 LEU 539 CONFLICT SEQADV 6FYW GLY B 525 UNP C0LT35 ASN 540 CONFLICT SEQADV 6FYW ARG B 526 UNP C0LT35 ASP 541 CONFLICT SEQRES 1 A 347 ASP ARG ILE CYS THR GLY ILE THR SER SER ASN SER PRO SEQRES 2 A 347 HIS VAL VAL LYS THR ALA THR GLN GLY GLU VAL ASN VAL SEQRES 3 A 347 THR GLY VAL ILE PRO LEU THR THR THR PRO THR LYS SER SEQRES 4 A 347 HIS PHE ALA ASN LEU LYS GLY THR GLU THR ARG GLY LYS SEQRES 5 A 347 LEU CYS PRO LYS CYS LEU ASN CYS THR ASP LEU ASP VAL SEQRES 6 A 347 ALA LEU GLY ARG PRO LYS CYS THR GLY LYS ILE PRO SER SEQRES 7 A 347 ALA ARG VAL SER ILE LEU HIS GLU VAL ARG PRO VAL THR SEQRES 8 A 347 SER GLY CYS PHE PRO ILE MET HIS ASP ARG THR LYS ILE SEQRES 9 A 347 ARG GLN LEU PRO ASN LEU LEU ARG GLY TYR GLU HIS ILE SEQRES 10 A 347 ARG LEU SER THR HIS ASN VAL ILE ASN ALA GLU ASN ALA SEQRES 11 A 347 PRO GLY GLY PRO TYR LYS ILE GLY THR SER GLY SER CYS SEQRES 12 A 347 PRO ASN ILE THR ASN GLY ASN GLY PHE PHE ALA THR MET SEQRES 13 A 347 ALA TRP ALA VAL PRO LYS ASN ASP LYS ASN LYS THR ALA SEQRES 14 A 347 THR ASN PRO LEU THR ILE GLU VAL PRO TYR ILE CYS THR SEQRES 15 A 347 GLU GLY GLU ASP GLN ILE THR VAL TRP GLY PHE HIS SER SEQRES 16 A 347 ASP ASN GLU THR GLN MET ALA LYS LEU TYR GLY ASP SER SEQRES 17 A 347 LYS PRO GLN LYS PHE THR SER SER ALA ASN GLY VAL THR SEQRES 18 A 347 THR HIS TYR VAL SER GLN ILE GLY GLY PHE PRO ASN GLN SEQRES 19 A 347 THR GLU ASP GLY GLY LEU PRO GLN SER GLY ARG ILE VAL SEQRES 20 A 347 VAL ASP TYR MET VAL GLN LYS SER GLY LYS THR GLY THR SEQRES 21 A 347 ILE THR TYR GLN ARG GLY ILE LEU LEU PRO GLN LYS VAL SEQRES 22 A 347 TRP CYS ALA SER GLY ARG SER LYS VAL ILE LYS GLY SER SEQRES 23 A 347 LEU PRO LEU ILE GLY GLU ALA ASP CYS LEU HIS GLU LYS SEQRES 24 A 347 TYR GLY GLY LEU ASN LYS SER LYS PRO TYR TYR THR GLY SEQRES 25 A 347 GLU HIS ALA LYS ALA ILE GLY ASN CYS PRO ILE TRP VAL SEQRES 26 A 347 LYS THR PRO LEU LYS LEU ALA ASN GLY THR LYS TYR ARG SEQRES 27 A 347 PRO PRO ALA LYS LEU LEU LYS GLU ARG SEQRES 1 B 179 GLY PHE PHE GLY ALA ILE ALA GLY PHE LEU GLU GLY GLY SEQRES 2 B 179 TRP GLU GLY MET ILE ALA GLY TRP HIS GLY TYR THR SER SEQRES 3 B 179 HIS GLY ALA HIS GLY VAL ALA VAL ALA ALA ASP LEU LYS SEQRES 4 B 179 SER THR GLN GLU ALA ILE ASN LYS ILE THR LYS ASN LEU SEQRES 5 B 179 ASN SER LEU SER GLU LEU GLU VAL LYS ASN LEU GLN ARG SEQRES 6 B 179 LEU SER GLY ALA MET ASP GLU LEU HIS ASN GLU ILE LEU SEQRES 7 B 179 GLU LEU ASP GLU LYS VAL ASP ASP LEU ARG ALA ASP THR SEQRES 8 B 179 ILE SER SER GLN ILE GLU LEU ALA VAL LEU LEU SER ASN SEQRES 9 B 179 GLU GLY ILE ILE ASN SER GLU ASP GLU HIS LEU LEU ALA SEQRES 10 B 179 LEU GLU ARG LYS LEU LYS LYS MET LEU GLY PRO SER ALA SEQRES 11 B 179 VAL GLU ILE GLY ASN GLY CYS PHE GLU THR LYS HIS LYS SEQRES 12 B 179 CYS ASN GLN THR CYS LEU ASP ARG ILE ALA ALA GLY THR SEQRES 13 B 179 PHE ASP ALA GLY GLU PHE SER LEU PRO THR PHE ASP SER SEQRES 14 B 179 LEU ASN ILE THR ALA ALA SER SER GLY ARG SEQRES 1 C 129 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 129 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA THR GLY SEQRES 3 C 129 PHE THR LEU GLU ASN LYS ALA ILE GLY TRP PHE ARG GLN SEQRES 4 C 129 THR PRO GLY SER GLU ARG GLU GLY VAL LEU CYS ILE SER SEQRES 5 C 129 LYS SER GLY SER TRP THR TYR TYR THR ASP SER MET ARG SEQRES 6 C 129 GLY ARG PHE THR ILE SER ARG ASP ASN ALA GLU ASN THR SEQRES 7 C 129 VAL TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP THR SEQRES 8 C 129 ALA VAL TYR TYR CYS ALA THR THR THR ALA GLY GLY GLY SEQRES 9 C 129 LEU CYS TRP ASP GLY THR THR PHE SER ARG LEU ALA SER SEQRES 10 C 129 SER TRP GLY GLN GLY THR GLN VAL THR VAL SER SER HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET MAN E 6 11 HET MAN E 7 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET NAG A 701 14 HET GOL A 722 6 HET GOL A 723 6 HET GOL A 724 6 HET GOL B 601 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 NAG 11(C8 H15 N O6) FORMUL 4 BMA 3(C6 H12 O6) FORMUL 4 MAN 7(C6 H12 O6) FORMUL 10 GOL 4(C3 H8 O3) FORMUL 14 HOH *393(H2 O) HELIX 1 AA1 THR A 61 GLY A 68 1 8 HELIX 2 AA2 MET A 98 THR A 102 5 5 HELIX 3 AA3 LYS A 103 ARG A 105 5 3 HELIX 4 AA4 GLN A 106 GLY A 113 1 8 HELIX 5 AA5 ASN A 163 LYS A 164 5 5 HELIX 6 AA6 ASN A 194 GLY A 203 1 10 HELIX 7 AA7 ASP B 384 GLU B 404 1 21 HELIX 8 AA8 HIS B 421 MET B 472 1 52 HELIX 9 AA9 LYS C 83 THR C 87 5 5 HELIX 10 AB1 ASP C 100D ALA C 100L 1 9 SHEET 1 AA1 3 GLY A 6 ILE A 7 0 SHEET 2 AA1 3 HIS B 369 TYR B 371 -1 O GLY B 370 N GLY A 6 SHEET 3 AA1 3 ALA B 382 ALA B 383 -1 O ALA B 382 N TYR B 371 SHEET 1 AA2 2 HIS A 14 LYS A 17 0 SHEET 2 AA2 2 GLU A 23 VAL A 26 -1 O VAL A 26 N HIS A 14 SHEET 1 AA3 2 VAL A 29 PRO A 31 0 SHEET 2 AA3 2 LYS A 327 ALA A 329 -1 O LEU A 328 N ILE A 30 SHEET 1 AA4 3 THR A 33 THR A 34 0 SHEET 2 AA4 3 TYR A 306 TYR A 307 1 O TYR A 306 N THR A 34 SHEET 3 AA4 3 ILE A 320 TRP A 321 1 O ILE A 320 N TYR A 307 SHEET 1 AA5 2 ASN A 43 LEU A 44 0 SHEET 2 AA5 2 GLU A 289 ALA A 290 1 O ALA A 290 N ASN A 43 SHEET 1 AA6 3 THR A 49 ARG A 50 0 SHEET 2 AA6 3 VAL A 81 LEU A 84 1 O VAL A 81 N ARG A 50 SHEET 3 AA6 3 LYS A 278 LYS A 281 1 O ILE A 280 N LEU A 84 SHEET 1 AA7 6 HIS A 116 LEU A 119 0 SHEET 2 AA7 6 TRP A 271 SER A 274 -1 O CYS A 272 N ARG A 118 SHEET 3 AA7 6 ASP A 183 SER A 192 -1 N ASP A 183 O ALA A 273 SHEET 4 AA7 6 ILE A 264 PRO A 267 -1 O LEU A 265 N GLY A 189 SHEET 5 AA7 6 MET A 156 PRO A 161 -1 N ALA A 157 O LEU A 266 SHEET 6 AA7 6 TYR A 135 GLY A 138 -1 N GLY A 138 O TRP A 158 SHEET 1 AA8 4 HIS A 116 LEU A 119 0 SHEET 2 AA8 4 TRP A 271 SER A 274 -1 O CYS A 272 N ARG A 118 SHEET 3 AA8 4 ASP A 183 SER A 192 -1 N ASP A 183 O ALA A 273 SHEET 4 AA8 4 ARG A 242 GLN A 250 -1 O GLN A 250 N GLN A 184 SHEET 1 AA9 2 SER A 140 PRO A 144 0 SHEET 2 AA9 2 ASN A 150 GLY A 151 -1 O GLY A 151 N SER A 140 SHEET 1 AB1 4 LEU A 170 VAL A 174 0 SHEET 2 AB1 4 GLY A 256 TYR A 260 -1 O GLY A 256 N VAL A 174 SHEET 3 AB1 4 LYS A 209 ALA A 214 -1 N THR A 211 O THR A 259 SHEET 4 AB1 4 VAL A 217 VAL A 222 -1 O TYR A 221 N PHE A 210 SHEET 1 AB2 3 GLY A 298 LEU A 300 0 SHEET 2 AB2 3 CYS A 292 HIS A 294 -1 N HIS A 294 O GLY A 298 SHEET 3 AB2 3 ALA A 314 GLY A 316 -1 O ILE A 315 N LEU A 293 SHEET 1 AB3 4 GLN C 3 SER C 7 0 SHEET 2 AB3 4 LEU C 18 THR C 25 -1 O THR C 25 N GLN C 3 SHEET 3 AB3 4 THR C 77 MET C 82 -1 O MET C 82 N LEU C 18 SHEET 4 AB3 4 PHE C 67 ASP C 72 -1 N SER C 70 O TYR C 79 SHEET 1 AB4 6 GLY C 10 VAL C 12 0 SHEET 2 AB4 6 THR C 107 VAL C 111 1 O THR C 110 N VAL C 12 SHEET 3 AB4 6 ALA C 88 THR C 94 -1 N TYR C 90 O THR C 107 SHEET 4 AB4 6 ILE C 34 GLN C 39 -1 N PHE C 37 O TYR C 91 SHEET 5 AB4 6 GLU C 46 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AB4 6 TRP C 56 TYR C 58 -1 O THR C 57 N CYS C 50 SHEET 1 AB5 4 GLY C 10 VAL C 12 0 SHEET 2 AB5 4 THR C 107 VAL C 111 1 O THR C 110 N VAL C 12 SHEET 3 AB5 4 ALA C 88 THR C 94 -1 N TYR C 90 O THR C 107 SHEET 4 AB5 4 SER C 102 TRP C 103 -1 N SER C 102 O THR C 94 SSBOND 1 CYS A 54 CYS A 57 1555 1555 2.04 SSBOND 2 CYS A 60 CYS A 72 1555 1555 2.03 SSBOND 3 CYS A 94 CYS A 143 1555 1555 2.04 SSBOND 4 CYS A 178 CYS A 272 1555 1555 2.04 SSBOND 5 CYS A 292 CYS A 318 1555 1555 2.04 SSBOND 6 CYS C 22 CYS C 92 1555 1555 2.04 SSBOND 7 CYS C 50 CYS C 100B 1555 1555 2.05 LINK ND2 ASN A 25 C1 NAG A 701 1555 1555 1.44 LINK ND2 ASN A 145 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 194 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN A 230 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 301 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 330 C1 NAG H 1 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 4 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 7 1555 1555 1.44 LINK O3 MAN E 4 C1 MAN E 5 1555 1555 1.44 LINK O6 MAN E 4 C1 MAN E 6 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.43 LINK O2 MAN H 4 C1 MAN H 5 1555 1555 1.44 CISPEP 1 GLY A 133 PRO A 134 0 2.16 CISPEP 2 LEU A 284 PRO A 285 0 1.20 CRYST1 189.040 189.040 189.040 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005290 0.00000