HEADER TRANSCRIPTION 14-MAR-18 6FZJ TITLE PPAR GAMMA MUTANT COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA COMPND 9 COACTIVATOR 1-ALPHA; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: PPARGC-1-ALPHA,LIGAND EFFECT MODULATOR 6; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPARG, NR1C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.ROCHEL REVDAT 2 17-JAN-24 6FZJ 1 REMARK REVDAT 1 13-FEB-19 6FZJ 0 JRNL AUTH N.ROCHEL,C.KRUCKER,L.COUTOS-THEVENOT,J.OSZ,R.ZHANG,E.GUYON, JRNL AUTH 2 W.ZITA,S.VANTHONG,O.A.HERNANDEZ,M.BOURGUET,K.A.BADAWY, JRNL AUTH 3 F.DUFOUR,C.PELUSO-ILTIS,S.HECKLER-BEJI,A.DEJAEGERE,A.KAMOUN, JRNL AUTH 4 A.DE REYNIES,Y.NEUZILLET,S.REBOUISSOU,C.BERAUD,H.LANG, JRNL AUTH 5 T.MASSFELDER,Y.ALLORY,S.CIANFERANI,R.H.STOTE,F.RADVANYI, JRNL AUTH 6 I.BERNARD-PIERROT JRNL TITL RECURRENT ACTIVATING MUTATIONS OF PPAR GAMMA ASSOCIATED WITH JRNL TITL 2 LUMINAL BLADDER TUMORS. JRNL REF NAT COMMUN V. 10 253 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30651555 JRNL DOI 10.1038/S41467-018-08157-Y REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 45617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 15.1793 - 5.0087 0.99 2811 148 0.1482 0.1747 REMARK 3 2 5.0087 - 3.9995 0.99 2770 145 0.1213 0.1412 REMARK 3 3 3.9995 - 3.5010 0.99 2774 147 0.1306 0.1919 REMARK 3 4 3.5010 - 3.1841 1.00 2786 146 0.1570 0.2129 REMARK 3 5 3.1841 - 2.9577 1.00 2792 147 0.1674 0.2428 REMARK 3 6 2.9577 - 2.7844 1.00 2742 144 0.1677 0.2441 REMARK 3 7 2.7844 - 2.6458 0.99 2762 146 0.1897 0.2444 REMARK 3 8 2.6458 - 2.5311 0.99 2748 144 0.2130 0.2829 REMARK 3 9 2.5311 - 2.4341 0.98 2745 145 0.2227 0.2948 REMARK 3 10 2.4341 - 2.3504 0.98 2722 143 0.2379 0.3044 REMARK 3 11 2.3504 - 2.2772 0.98 2703 143 0.2292 0.2792 REMARK 3 12 2.2772 - 2.2123 0.98 2756 143 0.2465 0.3195 REMARK 3 13 2.2123 - 2.1542 0.99 2736 144 0.2394 0.3124 REMARK 3 14 2.1542 - 2.1018 0.99 2709 143 0.2588 0.3215 REMARK 3 15 2.1018 - 2.0541 0.99 2774 144 0.2870 0.3450 REMARK 3 16 2.0541 - 2.0105 0.73 2010 106 0.3052 0.3790 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4817 REMARK 3 ANGLE : 0.831 6519 REMARK 3 CHIRALITY : 0.046 752 REMARK 3 PLANARITY : 0.005 882 REMARK 3 DIHEDRAL : 14.842 3057 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8033 38.2053 -9.1792 REMARK 3 T TENSOR REMARK 3 T11: 0.3134 T22: 0.2142 REMARK 3 T33: 0.3039 T12: -0.0067 REMARK 3 T13: 0.0547 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.2701 L22: 1.7614 REMARK 3 L33: 4.7770 L12: 1.2580 REMARK 3 L13: 2.3693 L23: 2.0730 REMARK 3 S TENSOR REMARK 3 S11: -0.1063 S12: -0.1114 S13: 0.4503 REMARK 3 S21: -0.0828 S22: -0.0963 S23: 0.2127 REMARK 3 S31: -0.5201 S32: -0.0699 S33: 0.1474 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7784 23.0112 -10.4758 REMARK 3 T TENSOR REMARK 3 T11: 0.1820 T22: 0.1720 REMARK 3 T33: 0.1726 T12: -0.0064 REMARK 3 T13: 0.0218 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.2540 L22: 1.2651 REMARK 3 L33: 1.6153 L12: 0.1795 REMARK 3 L13: 0.0969 L23: 0.2538 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.0225 S13: -0.0165 REMARK 3 S21: 0.0669 S22: 0.0081 S23: -0.0450 REMARK 3 S31: 0.0724 S32: 0.0775 S33: -0.0161 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1452 24.0009 3.9928 REMARK 3 T TENSOR REMARK 3 T11: 0.2680 T22: 0.3589 REMARK 3 T33: 0.2589 T12: -0.0204 REMARK 3 T13: 0.0847 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 8.0881 L22: 2.7026 REMARK 3 L33: 7.4469 L12: -0.4878 REMARK 3 L13: 3.7005 L23: -3.3658 REMARK 3 S TENSOR REMARK 3 S11: 0.0850 S12: -0.8764 S13: -0.3805 REMARK 3 S21: 0.4197 S22: -0.1291 S23: 0.1135 REMARK 3 S31: 0.0912 S32: -0.4990 S33: 0.0829 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8629 -6.0737 -30.8548 REMARK 3 T TENSOR REMARK 3 T11: 0.5155 T22: 0.3410 REMARK 3 T33: 0.1697 T12: -0.0171 REMARK 3 T13: 0.0434 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 4.8024 L22: 3.1724 REMARK 3 L33: 7.3407 L12: 0.0590 REMARK 3 L13: -0.7746 L23: -3.1317 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: 0.5962 S13: -0.0274 REMARK 3 S21: -1.1825 S22: 0.1421 S23: -0.0761 REMARK 3 S31: 0.2628 S32: 0.0179 S33: -0.0996 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 226 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4409 -16.1038 -17.8417 REMARK 3 T TENSOR REMARK 3 T11: 0.4168 T22: 0.3212 REMARK 3 T33: 0.2466 T12: -0.0627 REMARK 3 T13: -0.0300 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.0406 L22: 7.9458 REMARK 3 L33: 6.7198 L12: 4.9107 REMARK 3 L13: -0.2683 L23: -0.6201 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: 0.1884 S13: -0.4821 REMARK 3 S21: -0.3789 S22: 0.1117 S23: 0.3779 REMARK 3 S31: 1.0644 S32: -0.5507 S33: -0.0480 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 239 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6678 -13.9413 -7.1234 REMARK 3 T TENSOR REMARK 3 T11: 0.2822 T22: 0.2263 REMARK 3 T33: 0.2451 T12: 0.0344 REMARK 3 T13: 0.0065 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 4.2660 L22: 3.0436 REMARK 3 L33: 2.4912 L12: 2.2378 REMARK 3 L13: -2.0292 L23: -1.7481 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: -0.2226 S13: -0.4738 REMARK 3 S21: 0.0943 S22: -0.1074 S23: -0.2466 REMARK 3 S31: 0.2422 S32: 0.0677 S33: 0.1730 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 334 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0059 -9.7118 -3.6451 REMARK 3 T TENSOR REMARK 3 T11: 0.2095 T22: 0.2304 REMARK 3 T33: 0.2817 T12: 0.0074 REMARK 3 T13: 0.0491 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 3.1061 L22: 4.3690 REMARK 3 L33: 6.8101 L12: 0.8089 REMARK 3 L13: -0.0983 L23: -2.5343 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: -0.2566 S13: 0.1790 REMARK 3 S21: 0.4399 S22: 0.1183 S23: 0.4741 REMARK 3 S31: -0.4239 S32: -0.2946 S33: -0.0860 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 378 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3288 2.8108 -23.2891 REMARK 3 T TENSOR REMARK 3 T11: 0.2830 T22: 0.1847 REMARK 3 T33: 0.1939 T12: 0.0121 REMARK 3 T13: -0.0080 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 4.9504 L22: 3.4129 REMARK 3 L33: 4.9805 L12: 1.1480 REMARK 3 L13: 2.2856 L23: -0.0158 REMARK 3 S TENSOR REMARK 3 S11: -0.1392 S12: 0.2987 S13: 0.2825 REMARK 3 S21: -0.4095 S22: 0.0777 S23: 0.2754 REMARK 3 S31: -0.1816 S32: -0.1069 S33: 0.0635 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 431 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6868 2.4456 -5.3274 REMARK 3 T TENSOR REMARK 3 T11: 0.3680 T22: 0.2515 REMARK 3 T33: 0.2946 T12: 0.0029 REMARK 3 T13: 0.0317 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 4.1221 L22: 4.2617 REMARK 3 L33: 4.2068 L12: -1.7973 REMARK 3 L13: 3.6607 L23: -3.4241 REMARK 3 S TENSOR REMARK 3 S11: -0.3932 S12: -0.5969 S13: 0.4850 REMARK 3 S21: 0.6848 S22: 0.0491 S23: 0.0470 REMARK 3 S31: -1.0870 S32: -0.5120 S33: 0.3958 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 460 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7914 -4.4083 2.2125 REMARK 3 T TENSOR REMARK 3 T11: 0.4061 T22: 0.4403 REMARK 3 T33: 0.2420 T12: -0.0198 REMARK 3 T13: -0.0674 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 6.6466 L22: 5.8829 REMARK 3 L33: 6.6394 L12: -1.2694 REMARK 3 L13: -1.5571 L23: 1.9132 REMARK 3 S TENSOR REMARK 3 S11: -0.0981 S12: -1.1016 S13: 0.3236 REMARK 3 S21: 0.8153 S22: -0.3258 S23: -0.1651 REMARK 3 S31: -0.2774 S32: 0.1746 S33: 0.3279 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 141 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.8750 28.8852 -8.5882 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.3740 REMARK 3 T33: 0.4183 T12: 0.0270 REMARK 3 T13: 0.0625 T23: -0.1410 REMARK 3 L TENSOR REMARK 3 L11: 9.5754 L22: 3.9361 REMARK 3 L33: 5.3585 L12: -3.1630 REMARK 3 L13: 3.9049 L23: 1.1759 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: 0.2009 S13: 0.0656 REMARK 3 S21: 0.0921 S22: -0.2977 S23: 0.4971 REMARK 3 S31: -0.1181 S32: -0.7787 S33: -0.0229 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 141 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9034 -9.2917 -10.4590 REMARK 3 T TENSOR REMARK 3 T11: 0.2657 T22: 0.2759 REMARK 3 T33: 0.4189 T12: 0.0407 REMARK 3 T13: -0.0388 T23: 0.1047 REMARK 3 L TENSOR REMARK 3 L11: 8.9417 L22: 9.4540 REMARK 3 L33: 2.6277 L12: -0.1446 REMARK 3 L13: -3.4517 L23: -0.7450 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: -0.3255 S13: -0.7332 REMARK 3 S21: 0.4157 S22: -0.0375 S23: -1.0517 REMARK 3 S31: 0.4589 S32: 0.9554 S33: -0.0317 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FZJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.011 REMARK 200 RESOLUTION RANGE LOW (A) : 15.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.11460 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.72710 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1PRG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 550 MME, 10% PEG 20 000, 30 MM REMARK 280 SODIUM FLUORIDE, 30 MM SODIUM BROMIDE, 30 MM SODIUM IODIDE, 0.1 REMARK 280 M SODIUM HEPES / MOPS PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.21500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 231 REMARK 465 LEU A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLU A 235 REMARK 465 SER A 236 REMARK 465 LEU A 298 REMARK 465 GLN A 299 REMARK 465 GLN B 231 REMARK 465 LEU B 232 REMARK 465 GLU B 300 REMARK 465 GLN B 301 REMARK 465 SER B 302 REMARK 465 GLU C 139 REMARK 465 GLU C 140 REMARK 465 GLU D 139 REMARK 465 GLU D 140 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 235 CG CD OE1 OE2 REMARK 470 GLN B 299 CG CD OE1 NE2 REMARK 470 ALA C 152 CA C O CB REMARK 470 ALA D 152 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 338 128.41 -39.15 REMARK 500 LEU A 421 45.08 -81.87 REMARK 500 SER A 456 75.67 -100.19 REMARK 500 ASP B 279 -169.31 -161.47 REMARK 500 LEU B 421 43.36 -84.70 REMARK 500 LEU B 504 -82.49 -88.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDK A 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 551 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 552 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 553 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 554 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDK B 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 552 DBREF 6FZJ A 231 505 UNP P37231 PPARG_HUMAN 231 505 DBREF 6FZJ B 231 505 UNP P37231 PPARG_HUMAN 231 505 DBREF 6FZJ C 139 152 PDB 6FZJ 6FZJ 139 152 DBREF 6FZJ D 139 152 PDB 6FZJ 6FZJ 139 152 SEQADV 6FZJ ILE A 280 UNP P37231 MET 280 ENGINEERED MUTATION SEQADV 6FZJ ILE B 280 UNP P37231 MET 280 ENGINEERED MUTATION SEQRES 1 A 275 GLN LEU ASN PRO GLU SER ALA ASP LEU ARG ALA LEU ALA SEQRES 2 A 275 LYS HIS LEU TYR ASP SER TYR ILE LYS SER PHE PRO LEU SEQRES 3 A 275 THR LYS ALA LYS ALA ARG ALA ILE LEU THR GLY LYS THR SEQRES 4 A 275 THR ASP LYS SER PRO PHE VAL ILE TYR ASP ILE ASN SER SEQRES 5 A 275 LEU MET MET GLY GLU ASP LYS ILE LYS PHE LYS HIS ILE SEQRES 6 A 275 THR PRO LEU GLN GLU GLN SER LYS GLU VAL ALA ILE ARG SEQRES 7 A 275 ILE PHE GLN GLY CYS GLN PHE ARG SER VAL GLU ALA VAL SEQRES 8 A 275 GLN GLU ILE THR GLU TYR ALA LYS SER ILE PRO GLY PHE SEQRES 9 A 275 VAL ASN LEU ASP LEU ASN ASP GLN VAL THR LEU LEU LYS SEQRES 10 A 275 TYR GLY VAL HIS GLU ILE ILE TYR THR MET LEU ALA SER SEQRES 11 A 275 LEU MET ASN LYS ASP GLY VAL LEU ILE SER GLU GLY GLN SEQRES 12 A 275 GLY PHE MET THR ARG GLU PHE LEU LYS SER LEU ARG LYS SEQRES 13 A 275 PRO PHE GLY ASP PHE MET GLU PRO LYS PHE GLU PHE ALA SEQRES 14 A 275 VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SER ASP LEU SEQRES 15 A 275 ALA ILE PHE ILE ALA VAL ILE ILE LEU SER GLY ASP ARG SEQRES 16 A 275 PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU ASP ILE GLN SEQRES 17 A 275 ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN LEU LYS LEU SEQRES 18 A 275 ASN HIS PRO GLU SER SER GLN LEU PHE ALA LYS LEU LEU SEQRES 19 A 275 GLN LYS MET THR ASP LEU ARG GLN ILE VAL THR GLU HIS SEQRES 20 A 275 VAL GLN LEU LEU GLN VAL ILE LYS LYS THR GLU THR ASP SEQRES 21 A 275 MET SER LEU HIS PRO LEU LEU GLN GLU ILE TYR LYS ASP SEQRES 22 A 275 LEU TYR SEQRES 1 B 275 GLN LEU ASN PRO GLU SER ALA ASP LEU ARG ALA LEU ALA SEQRES 2 B 275 LYS HIS LEU TYR ASP SER TYR ILE LYS SER PHE PRO LEU SEQRES 3 B 275 THR LYS ALA LYS ALA ARG ALA ILE LEU THR GLY LYS THR SEQRES 4 B 275 THR ASP LYS SER PRO PHE VAL ILE TYR ASP ILE ASN SER SEQRES 5 B 275 LEU MET MET GLY GLU ASP LYS ILE LYS PHE LYS HIS ILE SEQRES 6 B 275 THR PRO LEU GLN GLU GLN SER LYS GLU VAL ALA ILE ARG SEQRES 7 B 275 ILE PHE GLN GLY CYS GLN PHE ARG SER VAL GLU ALA VAL SEQRES 8 B 275 GLN GLU ILE THR GLU TYR ALA LYS SER ILE PRO GLY PHE SEQRES 9 B 275 VAL ASN LEU ASP LEU ASN ASP GLN VAL THR LEU LEU LYS SEQRES 10 B 275 TYR GLY VAL HIS GLU ILE ILE TYR THR MET LEU ALA SER SEQRES 11 B 275 LEU MET ASN LYS ASP GLY VAL LEU ILE SER GLU GLY GLN SEQRES 12 B 275 GLY PHE MET THR ARG GLU PHE LEU LYS SER LEU ARG LYS SEQRES 13 B 275 PRO PHE GLY ASP PHE MET GLU PRO LYS PHE GLU PHE ALA SEQRES 14 B 275 VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SER ASP LEU SEQRES 15 B 275 ALA ILE PHE ILE ALA VAL ILE ILE LEU SER GLY ASP ARG SEQRES 16 B 275 PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU ASP ILE GLN SEQRES 17 B 275 ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN LEU LYS LEU SEQRES 18 B 275 ASN HIS PRO GLU SER SER GLN LEU PHE ALA LYS LEU LEU SEQRES 19 B 275 GLN LYS MET THR ASP LEU ARG GLN ILE VAL THR GLU HIS SEQRES 20 B 275 VAL GLN LEU LEU GLN VAL ILE LYS LYS THR GLU THR ASP SEQRES 21 B 275 MET SER LEU HIS PRO LEU LEU GLN GLU ILE TYR LYS ASP SEQRES 22 B 275 LEU TYR SEQRES 1 C 14 GLU GLU PRO SER LEU LEU LYS LYS LEU LEU LEU ALA PRO SEQRES 2 C 14 ALA SEQRES 1 D 14 GLU GLU PRO SER LEU LEU LYS LYS LEU LEU LEU ALA PRO SEQRES 2 D 14 ALA HET EDK A 550 37 HET IOD A 551 1 HET CL A 552 1 HET CL A 553 1 HET CL A 554 1 HET EDK B 550 37 HET IOD B 551 1 HET CL B 552 1 HETNAM EDK (2~{S})-3-[4-[2-[METHYL(PYRIDIN-2-YL) HETNAM 2 EDK AMINO]ETHOXY]PHENYL]-2-[[2-(PHENYLCARBONYL) HETNAM 3 EDK PHENYL]AMINO]PROPANOIC ACID HETNAM IOD IODIDE ION HETNAM CL CHLORIDE ION FORMUL 5 EDK 2(C30 H29 N3 O4) FORMUL 6 IOD 2(I 1-) FORMUL 7 CL 4(CL 1-) FORMUL 13 HOH *404(H2 O) HELIX 1 AA1 ASP A 238 PHE A 254 1 17 HELIX 2 AA2 THR A 257 THR A 266 1 10 HELIX 3 AA3 ASP A 279 GLU A 287 1 9 HELIX 4 AA4 ASP A 288 THR A 296 5 9 HELIX 5 AA5 GLU A 304 ILE A 331 1 28 HELIX 6 AA6 GLY A 333 LEU A 337 5 5 HELIX 7 AA7 ASP A 338 LEU A 361 1 24 HELIX 8 AA8 SER A 370 GLY A 372 5 3 HELIX 9 AA9 ARG A 378 SER A 383 1 6 HELIX 10 AB1 PRO A 387 PHE A 391 5 5 HELIX 11 AB2 MET A 392 ALA A 404 1 13 HELIX 12 AB3 ASP A 408 LEU A 421 1 14 HELIX 13 AB4 ASN A 430 HIS A 453 1 24 HELIX 14 AB5 GLN A 458 GLU A 488 1 31 HELIX 15 AB6 HIS A 494 LYS A 502 1 9 HELIX 16 AB7 PRO B 234 PHE B 254 1 21 HELIX 17 AB8 THR B 257 GLY B 267 1 11 HELIX 18 AB9 ASP B 279 GLU B 287 1 9 HELIX 19 AC1 ASP B 288 GLN B 299 5 12 HELIX 20 AC2 GLU B 304 SER B 330 1 27 HELIX 21 AC3 GLY B 333 LEU B 337 5 5 HELIX 22 AC4 ASP B 338 LEU B 361 1 24 HELIX 23 AC5 SER B 370 GLY B 372 5 3 HELIX 24 AC6 ARG B 378 SER B 383 1 6 HELIX 25 AC7 PRO B 387 PHE B 391 5 5 HELIX 26 AC8 MET B 392 ALA B 404 1 13 HELIX 27 AC9 ASP B 408 LEU B 421 1 14 HELIX 28 AD1 ASN B 430 HIS B 453 1 24 HELIX 29 AD2 GLN B 458 GLU B 488 1 31 HELIX 30 AD3 HIS B 494 LYS B 502 1 9 HELIX 31 AD4 SER C 142 ALA C 150 1 9 HELIX 32 AD5 SER D 142 ALA D 150 1 9 SHEET 1 AA1 4 PHE A 275 ILE A 277 0 SHEET 2 AA1 4 GLY A 374 THR A 377 1 O PHE A 375 N PHE A 275 SHEET 3 AA1 4 GLY A 366 ILE A 369 -1 N VAL A 367 O MET A 376 SHEET 4 AA1 4 MET A 362 ASN A 363 -1 N ASN A 363 O GLY A 366 SHEET 1 AA2 4 PHE B 275 ILE B 277 0 SHEET 2 AA2 4 GLY B 374 THR B 377 1 O PHE B 375 N ILE B 277 SHEET 3 AA2 4 GLY B 366 ILE B 369 -1 N VAL B 367 O MET B 376 SHEET 4 AA2 4 MET B 362 ASN B 363 -1 N ASN B 363 O GLY B 366 CISPEP 1 LYS A 386 PRO A 387 0 1.81 CISPEP 2 LYS B 386 PRO B 387 0 -2.22 SITE 1 AC1 15 PHE A 310 GLY A 312 CYS A 313 GLN A 314 SITE 2 AC1 15 SER A 317 HIS A 351 ILE A 369 PHE A 388 SITE 3 AC1 15 PHE A 391 MET A 392 HIS A 477 LEU A 481 SITE 4 AC1 15 LEU A 497 TYR A 501 HOH A 688 SITE 1 AC2 1 SER A 370 SITE 1 AC3 3 ASN A 403 HOH A 628 HOH A 729 SITE 1 AC4 1 GLN A 311 SITE 1 AC5 3 HIS A 453 PRO A 454 GLU A 455 SITE 1 AC6 14 PHE B 310 GLY B 312 CYS B 313 GLN B 314 SITE 2 AC6 14 SER B 317 HIS B 351 TYR B 355 ILE B 369 SITE 3 AC6 14 PHE B 388 PHE B 391 HIS B 477 TYR B 501 SITE 4 AC6 14 HOH B 622 HOH B 644 SITE 1 AC7 2 ASN B 403 HOH B 726 CRYST1 52.270 126.430 54.720 90.00 94.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019131 0.000000 0.001644 0.00000 SCALE2 0.000000 0.007910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018342 0.00000