data_6G2O # _entry.id 6G2O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6G2O WWPDB D_1200009328 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6G24 unspecified PDB . 6G25 unspecified PDB . 6G27 unspecified PDB . 6G29 unspecified PDB . 6G2B unspecified PDB . 6G2C unspecified PDB . 6G2E unspecified PDB . 6G2F unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6G2O _pdbx_database_status.recvd_initial_deposition_date 2018-03-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Boettcher, J.' 1 ? 'Muellauer, B.J.' 2 ? 'Weiss-Puxbaum, A.' 3 ? 'Zoephel, A.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 822 _citation.page_last 829 _citation.title 'Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-019-0310-x _citation.pdbx_database_id_PubMed 31285596 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bottcher, J.' 1 0000-0003-2189-5926 primary 'Dilworth, D.' 2 0000-0001-5557-9476 primary 'Reiser, U.' 3 ? primary 'Neumuller, R.A.' 4 ? primary 'Schleicher, M.' 5 ? primary 'Petronczki, M.' 6 ? primary 'Zeeb, M.' 7 ? primary 'Mischerikow, N.' 8 ? primary 'Allali-Hassani, A.' 9 ? primary 'Szewczyk, M.M.' 10 ? primary 'Li, F.' 11 ? primary 'Kennedy, S.' 12 ? primary 'Vedadi, M.' 13 0000-0002-0574-0169 primary 'Barsyte-Lovejoy, D.' 14 0000-0002-6560-9621 primary 'Brown, P.J.' 15 0000-0002-8454-0367 primary 'Huber, K.V.M.' 16 0000-0002-1103-5300 primary 'Rogers, C.M.' 17 ? primary 'Wells, C.I.' 18 0000-0003-4799-6792 primary 'Fedorov, O.' 19 ? primary 'Rumpel, K.' 20 ? primary 'Zoephel, A.' 21 ? primary 'Mayer, M.' 22 ? primary 'Wunberg, T.' 23 ? primary 'Bose, D.' 24 ? primary 'Zahn, S.' 25 ? primary 'Arnhof, H.' 26 ? primary 'Berger, H.' 27 ? primary 'Reiser, C.' 28 ? primary 'Hormann, A.' 29 ? primary 'Krammer, T.' 30 ? primary 'Corcokovic, M.' 31 ? primary 'Sharps, B.' 32 ? primary 'Winkler, S.' 33 0000-0003-3747-5133 primary 'Haring, D.' 34 ? primary 'Cockcroft, X.L.' 35 ? primary 'Fuchs, J.E.' 36 ? primary 'Mullauer, B.' 37 ? primary 'Weiss-Puxbaum, A.' 38 ? primary 'Gerstberger, T.' 39 ? primary 'Boehmelt, G.' 40 ? primary 'Vakoc, C.R.' 41 ? primary 'Arrowsmith, C.H.' 42 0000-0002-4971-3250 primary 'Pearson, M.' 43 ? primary 'McConnell, D.B.' 44 0000-0002-2537-3458 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6G2O _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.279 _cell.length_a_esd ? _cell.length_b 47.568 _cell.length_b_esd ? _cell.length_c 61.113 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone-lysine N-methyltransferase NSD3' 16271.401 1 2.1.1.43 ? ? ? 2 non-polymer syn '[4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine' 360.427 1 ? ? ? ? 3 water nat water 18.015 96 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Nuclear SET domain-containing protein 3,Protein whistle,WHSC1-like 1 isoform 9 with methyltransferase activity to lysine,Wolf-Hirschhorn syndrome candidate 1-like protein 1,WHSC1-like protein 1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAE ATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAE ATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 GLY n 1 4 VAL n 1 5 LYS n 1 6 PHE n 1 7 GLN n 1 8 VAL n 1 9 GLY n 1 10 ASP n 1 11 LEU n 1 12 VAL n 1 13 TRP n 1 14 SER n 1 15 LYS n 1 16 VAL n 1 17 GLY n 1 18 THR n 1 19 TYR n 1 20 PRO n 1 21 TRP n 1 22 TRP n 1 23 PRO n 1 24 CYS n 1 25 MET n 1 26 VAL n 1 27 SER n 1 28 SER n 1 29 ASP n 1 30 PRO n 1 31 GLN n 1 32 LEU n 1 33 GLU n 1 34 VAL n 1 35 HIS n 1 36 THR n 1 37 LYS n 1 38 ILE n 1 39 ASN n 1 40 THR n 1 41 ARG n 1 42 GLY n 1 43 ALA n 1 44 ARG n 1 45 GLU n 1 46 TYR n 1 47 HIS n 1 48 VAL n 1 49 GLN n 1 50 PHE n 1 51 PHE n 1 52 SER n 1 53 ASN n 1 54 GLN n 1 55 PRO n 1 56 GLU n 1 57 ARG n 1 58 ALA n 1 59 TRP n 1 60 VAL n 1 61 HIS n 1 62 GLU n 1 63 LYS n 1 64 ARG n 1 65 VAL n 1 66 ARG n 1 67 GLU n 1 68 TYR n 1 69 LYS n 1 70 GLY n 1 71 HIS n 1 72 LYS n 1 73 GLN n 1 74 TYR n 1 75 GLU n 1 76 GLU n 1 77 LEU n 1 78 LEU n 1 79 ALA n 1 80 GLU n 1 81 ALA n 1 82 THR n 1 83 LYS n 1 84 GLN n 1 85 ALA n 1 86 SER n 1 87 ASN n 1 88 HIS n 1 89 SER n 1 90 GLU n 1 91 LYS n 1 92 GLN n 1 93 LYS n 1 94 ILE n 1 95 ARG n 1 96 LYS n 1 97 PRO n 1 98 ARG n 1 99 PRO n 1 100 GLN n 1 101 ARG n 1 102 GLU n 1 103 ARG n 1 104 ALA n 1 105 GLN n 1 106 TRP n 1 107 ASP n 1 108 ILE n 1 109 GLY n 1 110 ILE n 1 111 ALA n 1 112 HIS n 1 113 ALA n 1 114 GLU n 1 115 LYS n 1 116 ALA n 1 117 LEU n 1 118 LYS n 1 119 MET n 1 120 THR n 1 121 ARG n 1 122 GLU n 1 123 GLU n 1 124 ARG n 1 125 ILE n 1 126 GLU n 1 127 GLN n 1 128 TYR n 1 129 THR n 1 130 PHE n 1 131 ILE n 1 132 TYR n 1 133 ILE n 1 134 ASP n 1 135 LYS n 1 136 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 136 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NSD3, WHSC1L1, DC28' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NSD3_HUMAN _struct_ref.pdbx_db_accession Q9BZ95 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAE ATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQ ; _struct_ref.pdbx_align_begin 263 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6G2O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 136 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BZ95 _struct_ref_seq.db_align_beg 263 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 398 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 263 _struct_ref_seq.pdbx_auth_seq_align_end 398 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EJE non-polymer . '[4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine' ? 'C22 H21 F N4' 360.427 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6G2O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Morpheus Buffer 3, 30% P550MME_P20K, 10% Morpheus Ethylene glycols' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-08-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6G2O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.81 _reflns.d_resolution_low 25.71 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12538 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.100 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.81 _reflns_shell.d_res_low 1.91 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.400 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1756 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 5.0836 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 6.8258 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -11.9094 _refine.B_iso_max 120.360 _refine.B_iso_mean 37.4500 _refine.B_iso_min 16.820 _refine.correlation_coeff_Fo_to_Fc 0.9360 _refine.correlation_coeff_Fo_to_Fc_free 0.9180 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6G2O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8100 _refine.ls_d_res_low 25.7100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12236 _refine.ls_number_reflns_R_free 623 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9000 _refine.ls_percent_reflns_R_free 5.0900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1950 _refine.ls_R_factor_R_free 0.2240 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1930 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.1240 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.1280 _refine.pdbx_overall_SU_R_Blow_DPI 0.1450 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.1360 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 6G2O _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.260 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8100 _refine_hist.d_res_low 25.7100 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 1153 _refine_hist.pdbx_number_residues_total 120 _refine_hist.pdbx_B_iso_mean_ligand 29.40 _refine_hist.pdbx_B_iso_mean_solvent 45.22 _refine_hist.pdbx_number_atoms_protein 1030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 383 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 180 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1089 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 127 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1283 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.008 ? 1089 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.870 ? 1472 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.600 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 14.330 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8100 _refine_ls_shell.d_res_low 1.9800 _refine_ls_shell.number_reflns_all 2880 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 141 _refine_ls_shell.number_reflns_R_work 2739 _refine_ls_shell.percent_reflns_obs 99.9700 _refine_ls_shell.percent_reflns_R_free 4.9000 _refine_ls_shell.R_factor_all 0.2231 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2576 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2214 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6G2O _struct.title 'X-ray structure of NSD3-PWWP1 in complex with compound BI-9321' _struct.pdbx_descriptor 'Histone-lysine N-methyltransferase NSD3 (E.C.2.1.1.43)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6G2O _struct_keywords.text 'Inhibitor, PWWP domain, ONCOPROTEIN' _struct_keywords.pdbx_keywords ONCOPROTEIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 70 ? LYS A 72 ? GLY A 332 LYS A 334 5 ? 3 HELX_P HELX_P2 AA2 GLN A 73 ? ALA A 79 ? GLN A 335 ALA A 341 1 ? 7 HELX_P HELX_P3 AA3 PRO A 99 ? LYS A 118 ? PRO A 361 LYS A 380 1 ? 20 HELX_P HELX_P4 AA4 THR A 120 ? THR A 129 ? THR A 382 THR A 391 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 36 ? ILE A 38 ? THR A 298 ILE A 300 AA1 2 ARG A 44 ? PHE A 50 ? ARG A 306 PHE A 312 AA1 3 GLU A 56 ? HIS A 61 ? GLU A 318 HIS A 323 AA2 1 THR A 36 ? ILE A 38 ? THR A 298 ILE A 300 AA2 2 ARG A 44 ? PHE A 50 ? ARG A 306 PHE A 312 AA2 3 TRP A 22 ? VAL A 26 ? TRP A 284 VAL A 288 AA2 4 LEU A 11 ? SER A 14 ? LEU A 273 SER A 276 AA2 5 VAL A 65 ? GLU A 67 ? VAL A 327 GLU A 329 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 37 ? N LYS A 299 O GLU A 45 ? O GLU A 307 AA1 2 3 N TYR A 46 ? N TYR A 308 O VAL A 60 ? O VAL A 322 AA2 1 2 N LYS A 37 ? N LYS A 299 O GLU A 45 ? O GLU A 307 AA2 2 3 O GLN A 49 ? O GLN A 311 N MET A 25 ? N MET A 287 AA2 3 4 O CYS A 24 ? O CYS A 286 N VAL A 12 ? N VAL A 274 AA2 4 5 N TRP A 13 ? N TRP A 275 O ARG A 66 ? O ARG A 328 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EJE _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'binding site for residue EJE A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 TYR A 19 ? TYR A 281 . ? 1_555 ? 2 AC1 10 TRP A 22 ? TRP A 284 . ? 1_555 ? 3 AC1 10 PHE A 50 ? PHE A 312 . ? 1_555 ? 4 AC1 10 SER A 52 ? SER A 314 . ? 1_555 ? 5 AC1 10 GLN A 54 ? GLN A 316 . ? 1_555 ? 6 AC1 10 GLU A 56 ? GLU A 318 . ? 1_555 ? 7 AC1 10 ARG A 57 ? ARG A 319 . ? 1_555 ? 8 AC1 10 GLU A 102 ? GLU A 364 . ? 1_555 ? 9 AC1 10 GLN A 105 ? GLN A 367 . ? 1_555 ? 10 AC1 10 HOH C . ? HOH A 549 . ? 1_555 ? # _atom_sites.entry_id 6G2O _atom_sites.fract_transf_matrix[1][1] 0.022584 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021023 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016363 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 263 ? ? ? A . n A 1 2 THR 2 264 ? ? ? A . n A 1 3 GLY 3 265 ? ? ? A . n A 1 4 VAL 4 266 266 VAL VAL A . n A 1 5 LYS 5 267 267 LYS LYS A . n A 1 6 PHE 6 268 268 PHE PHE A . n A 1 7 GLN 7 269 269 GLN GLN A . n A 1 8 VAL 8 270 270 VAL VAL A . n A 1 9 GLY 9 271 271 GLY GLY A . n A 1 10 ASP 10 272 272 ASP ASP A . n A 1 11 LEU 11 273 273 LEU LEU A . n A 1 12 VAL 12 274 274 VAL VAL A . n A 1 13 TRP 13 275 275 TRP TRP A . n A 1 14 SER 14 276 276 SER SER A . n A 1 15 LYS 15 277 277 LYS LYS A . n A 1 16 VAL 16 278 278 VAL VAL A . n A 1 17 GLY 17 279 279 GLY GLY A . n A 1 18 THR 18 280 280 THR THR A . n A 1 19 TYR 19 281 281 TYR TYR A . n A 1 20 PRO 20 282 282 PRO PRO A . n A 1 21 TRP 21 283 283 TRP TRP A . n A 1 22 TRP 22 284 284 TRP TRP A . n A 1 23 PRO 23 285 285 PRO PRO A . n A 1 24 CYS 24 286 286 CYS CYS A . n A 1 25 MET 25 287 287 MET MET A . n A 1 26 VAL 26 288 288 VAL VAL A . n A 1 27 SER 27 289 289 SER SER A . n A 1 28 SER 28 290 290 SER SER A . n A 1 29 ASP 29 291 291 ASP ASP A . n A 1 30 PRO 30 292 292 PRO PRO A . n A 1 31 GLN 31 293 293 GLN GLN A . n A 1 32 LEU 32 294 294 LEU LEU A . n A 1 33 GLU 33 295 295 GLU GLU A . n A 1 34 VAL 34 296 296 VAL VAL A . n A 1 35 HIS 35 297 297 HIS HIS A . n A 1 36 THR 36 298 298 THR THR A . n A 1 37 LYS 37 299 299 LYS LYS A . n A 1 38 ILE 38 300 300 ILE ILE A . n A 1 39 ASN 39 301 301 ASN ASN A . n A 1 40 THR 40 302 302 THR THR A . n A 1 41 ARG 41 303 303 ARG ARG A . n A 1 42 GLY 42 304 304 GLY GLY A . n A 1 43 ALA 43 305 305 ALA ALA A . n A 1 44 ARG 44 306 306 ARG ARG A . n A 1 45 GLU 45 307 307 GLU GLU A . n A 1 46 TYR 46 308 308 TYR TYR A . n A 1 47 HIS 47 309 309 HIS HIS A . n A 1 48 VAL 48 310 310 VAL VAL A . n A 1 49 GLN 49 311 311 GLN GLN A . n A 1 50 PHE 50 312 312 PHE PHE A . n A 1 51 PHE 51 313 313 PHE PHE A . n A 1 52 SER 52 314 314 SER SER A . n A 1 53 ASN 53 315 315 ASN ASN A . n A 1 54 GLN 54 316 316 GLN GLN A . n A 1 55 PRO 55 317 317 PRO PRO A . n A 1 56 GLU 56 318 318 GLU GLU A . n A 1 57 ARG 57 319 319 ARG ARG A . n A 1 58 ALA 58 320 320 ALA ALA A . n A 1 59 TRP 59 321 321 TRP TRP A . n A 1 60 VAL 60 322 322 VAL VAL A . n A 1 61 HIS 61 323 323 HIS HIS A . n A 1 62 GLU 62 324 324 GLU GLU A . n A 1 63 LYS 63 325 325 LYS LYS A . n A 1 64 ARG 64 326 326 ARG ARG A . n A 1 65 VAL 65 327 327 VAL VAL A . n A 1 66 ARG 66 328 328 ARG ARG A . n A 1 67 GLU 67 329 329 GLU GLU A . n A 1 68 TYR 68 330 330 TYR TYR A . n A 1 69 LYS 69 331 331 LYS LYS A . n A 1 70 GLY 70 332 332 GLY GLY A . n A 1 71 HIS 71 333 333 HIS HIS A . n A 1 72 LYS 72 334 334 LYS LYS A . n A 1 73 GLN 73 335 335 GLN GLN A . n A 1 74 TYR 74 336 336 TYR TYR A . n A 1 75 GLU 75 337 337 GLU GLU A . n A 1 76 GLU 76 338 338 GLU GLU A . n A 1 77 LEU 77 339 339 LEU LEU A . n A 1 78 LEU 78 340 340 LEU LEU A . n A 1 79 ALA 79 341 341 ALA ALA A . n A 1 80 GLU 80 342 342 GLU GLU A . n A 1 81 ALA 81 343 ? ? ? A . n A 1 82 THR 82 344 ? ? ? A . n A 1 83 LYS 83 345 ? ? ? A . n A 1 84 GLN 84 346 ? ? ? A . n A 1 85 ALA 85 347 ? ? ? A . n A 1 86 SER 86 348 ? ? ? A . n A 1 87 ASN 87 349 ? ? ? A . n A 1 88 HIS 88 350 ? ? ? A . n A 1 89 SER 89 351 ? ? ? A . n A 1 90 GLU 90 352 ? ? ? A . n A 1 91 LYS 91 353 ? ? ? A . n A 1 92 GLN 92 354 354 GLN GLN A . n A 1 93 LYS 93 355 355 LYS LYS A . n A 1 94 ILE 94 356 356 ILE ILE A . n A 1 95 ARG 95 357 357 ARG ARG A . n A 1 96 LYS 96 358 358 LYS LYS A . n A 1 97 PRO 97 359 359 PRO PRO A . n A 1 98 ARG 98 360 360 ARG ARG A . n A 1 99 PRO 99 361 361 PRO PRO A . n A 1 100 GLN 100 362 362 GLN GLN A . n A 1 101 ARG 101 363 363 ARG ARG A . n A 1 102 GLU 102 364 364 GLU GLU A . n A 1 103 ARG 103 365 365 ARG ARG A . n A 1 104 ALA 104 366 366 ALA ALA A . n A 1 105 GLN 105 367 367 GLN GLN A . n A 1 106 TRP 106 368 368 TRP TRP A . n A 1 107 ASP 107 369 369 ASP ASP A . n A 1 108 ILE 108 370 370 ILE ILE A . n A 1 109 GLY 109 371 371 GLY GLY A . n A 1 110 ILE 110 372 372 ILE ILE A . n A 1 111 ALA 111 373 373 ALA ALA A . n A 1 112 HIS 112 374 374 HIS HIS A . n A 1 113 ALA 113 375 375 ALA ALA A . n A 1 114 GLU 114 376 376 GLU GLU A . n A 1 115 LYS 115 377 377 LYS LYS A . n A 1 116 ALA 116 378 378 ALA ALA A . n A 1 117 LEU 117 379 379 LEU LEU A . n A 1 118 LYS 118 380 380 LYS LYS A . n A 1 119 MET 119 381 381 MET MET A . n A 1 120 THR 120 382 382 THR THR A . n A 1 121 ARG 121 383 383 ARG ARG A . n A 1 122 GLU 122 384 384 GLU GLU A . n A 1 123 GLU 123 385 385 GLU GLU A . n A 1 124 ARG 124 386 386 ARG ARG A . n A 1 125 ILE 125 387 387 ILE ILE A . n A 1 126 GLU 126 388 388 GLU GLU A . n A 1 127 GLN 127 389 389 GLN GLN A . n A 1 128 TYR 128 390 390 TYR TYR A . n A 1 129 THR 129 391 391 THR THR A . n A 1 130 PHE 130 392 392 PHE PHE A . n A 1 131 ILE 131 393 393 ILE ILE A . n A 1 132 TYR 132 394 394 TYR TYR A . n A 1 133 ILE 133 395 395 ILE ILE A . n A 1 134 ASP 134 396 396 ASP ASP A . n A 1 135 LYS 135 397 ? ? ? A . n A 1 136 GLN 136 398 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EJE 1 401 1 EJE LIG A . C 3 HOH 1 501 11 HOH HOH A . C 3 HOH 2 502 4 HOH HOH A . C 3 HOH 3 503 1 HOH HOH A . C 3 HOH 4 504 25 HOH HOH A . C 3 HOH 5 505 33 HOH HOH A . C 3 HOH 6 506 79 HOH HOH A . C 3 HOH 7 507 26 HOH HOH A . C 3 HOH 8 508 22 HOH HOH A . C 3 HOH 9 509 51 HOH HOH A . C 3 HOH 10 510 28 HOH HOH A . C 3 HOH 11 511 42 HOH HOH A . C 3 HOH 12 512 116 HOH HOH A . C 3 HOH 13 513 45 HOH HOH A . C 3 HOH 14 514 32 HOH HOH A . C 3 HOH 15 515 60 HOH HOH A . C 3 HOH 16 516 48 HOH HOH A . C 3 HOH 17 517 67 HOH HOH A . C 3 HOH 18 518 16 HOH HOH A . C 3 HOH 19 519 94 HOH HOH A . C 3 HOH 20 520 19 HOH HOH A . C 3 HOH 21 521 38 HOH HOH A . C 3 HOH 22 522 23 HOH HOH A . C 3 HOH 23 523 44 HOH HOH A . C 3 HOH 24 524 36 HOH HOH A . C 3 HOH 25 525 66 HOH HOH A . C 3 HOH 26 526 9 HOH HOH A . C 3 HOH 27 527 70 HOH HOH A . C 3 HOH 28 528 81 HOH HOH A . C 3 HOH 29 529 61 HOH HOH A . C 3 HOH 30 530 118 HOH HOH A . C 3 HOH 31 531 24 HOH HOH A . C 3 HOH 32 532 14 HOH HOH A . C 3 HOH 33 533 10 HOH HOH A . C 3 HOH 34 534 62 HOH HOH A . C 3 HOH 35 535 2 HOH HOH A . C 3 HOH 36 536 69 HOH HOH A . C 3 HOH 37 537 34 HOH HOH A . C 3 HOH 38 538 37 HOH HOH A . C 3 HOH 39 539 72 HOH HOH A . C 3 HOH 40 540 39 HOH HOH A . C 3 HOH 41 541 40 HOH HOH A . C 3 HOH 42 542 73 HOH HOH A . C 3 HOH 43 543 30 HOH HOH A . C 3 HOH 44 544 15 HOH HOH A . C 3 HOH 45 545 68 HOH HOH A . C 3 HOH 46 546 21 HOH HOH A . C 3 HOH 47 547 7 HOH HOH A . C 3 HOH 48 548 71 HOH HOH A . C 3 HOH 49 549 88 HOH HOH A . C 3 HOH 50 550 78 HOH HOH A . C 3 HOH 51 551 6 HOH HOH A . C 3 HOH 52 552 56 HOH HOH A . C 3 HOH 53 553 110 HOH HOH A . C 3 HOH 54 554 49 HOH HOH A . C 3 HOH 55 555 58 HOH HOH A . C 3 HOH 56 556 46 HOH HOH A . C 3 HOH 57 557 119 HOH HOH A . C 3 HOH 58 558 54 HOH HOH A . C 3 HOH 59 559 20 HOH HOH A . C 3 HOH 60 560 77 HOH HOH A . C 3 HOH 61 561 35 HOH HOH A . C 3 HOH 62 562 27 HOH HOH A . C 3 HOH 63 563 12 HOH HOH A . C 3 HOH 64 564 47 HOH HOH A . C 3 HOH 65 565 112 HOH HOH A . C 3 HOH 66 566 3 HOH HOH A . C 3 HOH 67 567 101 HOH HOH A . C 3 HOH 68 568 5 HOH HOH A . C 3 HOH 69 569 117 HOH HOH A . C 3 HOH 70 570 13 HOH HOH A . C 3 HOH 71 571 41 HOH HOH A . C 3 HOH 72 572 59 HOH HOH A . C 3 HOH 73 573 75 HOH HOH A . C 3 HOH 74 574 63 HOH HOH A . C 3 HOH 75 575 29 HOH HOH A . C 3 HOH 76 576 80 HOH HOH A . C 3 HOH 77 577 43 HOH HOH A . C 3 HOH 78 578 8 HOH HOH A . C 3 HOH 79 579 111 HOH HOH A . C 3 HOH 80 580 82 HOH HOH A . C 3 HOH 81 581 106 HOH HOH A . C 3 HOH 82 582 52 HOH HOH A . C 3 HOH 83 583 102 HOH HOH A . C 3 HOH 84 584 50 HOH HOH A . C 3 HOH 85 585 76 HOH HOH A . C 3 HOH 86 586 100 HOH HOH A . C 3 HOH 87 587 65 HOH HOH A . C 3 HOH 88 588 64 HOH HOH A . C 3 HOH 89 589 84 HOH HOH A . C 3 HOH 90 590 113 HOH HOH A . C 3 HOH 91 591 98 HOH HOH A . C 3 HOH 92 592 89 HOH HOH A . C 3 HOH 93 593 83 HOH HOH A . C 3 HOH 94 594 114 HOH HOH A . C 3 HOH 95 595 115 HOH HOH A . C 3 HOH 96 596 87 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 8300 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-26 2 'Structure model' 1 1 2020-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -8.2139 _pdbx_refine_tls.origin_y 8.9316 _pdbx_refine_tls.origin_z -11.8621 _pdbx_refine_tls.T[1][1] -0.0711 _pdbx_refine_tls.T[2][2] -0.0710 _pdbx_refine_tls.T[3][3] -0.0702 _pdbx_refine_tls.T[1][2] -0.0155 _pdbx_refine_tls.T[1][3] 0.0037 _pdbx_refine_tls.T[2][3] -0.0014 _pdbx_refine_tls.L[1][1] 2.5976 _pdbx_refine_tls.L[2][2] 4.4394 _pdbx_refine_tls.L[3][3] 1.4814 _pdbx_refine_tls.L[1][2] -0.6569 _pdbx_refine_tls.L[1][3] 0.5228 _pdbx_refine_tls.L[2][3] 0.7167 _pdbx_refine_tls.S[1][1] -0.0131 _pdbx_refine_tls.S[2][2] 0.0051 _pdbx_refine_tls.S[3][3] 0.0080 _pdbx_refine_tls.S[1][2] -0.0248 _pdbx_refine_tls.S[1][3] 0.0072 _pdbx_refine_tls.S[2][3] 0.0194 _pdbx_refine_tls.S[2][1] 0.0568 _pdbx_refine_tls.S[3][1] 0.0132 _pdbx_refine_tls.S[3][2] -0.0035 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 266 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 396 _pdbx_refine_tls_group.selection_details '{ A|* }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.32 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.7 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? BALBES ? ? ? . 5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 263 ? A SER 1 2 1 Y 1 A THR 264 ? A THR 2 3 1 Y 1 A GLY 265 ? A GLY 3 4 1 Y 1 A ALA 343 ? A ALA 81 5 1 Y 1 A THR 344 ? A THR 82 6 1 Y 1 A LYS 345 ? A LYS 83 7 1 Y 1 A GLN 346 ? A GLN 84 8 1 Y 1 A ALA 347 ? A ALA 85 9 1 Y 1 A SER 348 ? A SER 86 10 1 Y 1 A ASN 349 ? A ASN 87 11 1 Y 1 A HIS 350 ? A HIS 88 12 1 Y 1 A SER 351 ? A SER 89 13 1 Y 1 A GLU 352 ? A GLU 90 14 1 Y 1 A LYS 353 ? A LYS 91 15 1 Y 1 A LYS 397 ? A LYS 135 16 1 Y 1 A GLN 398 ? A GLN 136 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine' EJE 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details monomer #