HEADER HYDROLASE 23-MAR-18 6G2W TITLE CRYSTAL STRUCTURE OF THE P97 D2 DOMAIN IN A HELICAL SPLIT-WASHER TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TER ATPASE,15S MG(2+)-ATPASE P97 SUBUNIT,VALOSIN-CONTAINING COMPND 5 PROTEIN,VCP; COMPND 6 EC: 3.6.4.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VCP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPASE, P97, PROTEIN DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.STACH,R.M.L.MORGAN,P.S.FREEMONT REVDAT 3 17-JAN-24 6G2W 1 REMARK REVDAT 2 22-APR-20 6G2W 1 JRNL REVDAT 1 10-APR-19 6G2W 0 JRNL AUTH L.STACH,R.M.MORGAN,L.MAKHLOUF,A.DOUANGAMATH,F.VON DELFT, JRNL AUTH 2 X.ZHANG,P.S.FREEMONT JRNL TITL CRYSTAL STRUCTURE OF THE CATALYTIC D2 DOMAIN OF THE AAA+ JRNL TITL 2 ATPASE P97 REVEALS A PUTATIVE HELICAL SPLIT-WASHER-TYPE JRNL TITL 3 MECHANISM FOR SUBSTRATE UNFOLDING. JRNL REF FEBS LETT. V. 594 933 2020 JRNL REFN ISSN 0014-5793 JRNL PMID 31701538 JRNL DOI 10.1002/1873-3468.13667 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 8766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.620 REMARK 3 FREE R VALUE TEST SET COUNT : 405 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0581 - 3.8625 0.98 2859 144 0.2085 0.2829 REMARK 3 2 3.8625 - 3.0659 0.97 2791 128 0.2689 0.3898 REMARK 3 3 3.0659 - 2.6784 0.95 2711 133 0.2868 0.3734 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2227 REMARK 3 ANGLE : 1.259 3007 REMARK 3 CHIRALITY : 0.060 335 REMARK 3 PLANARITY : 0.008 383 REMARK 3 DIHEDRAL : 8.270 1916 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6G2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9040 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.678 REMARK 200 RESOLUTION RANGE LOW (A) : 26.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 9.890 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 51.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FTJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08M L-NA-GLUTAMATE; 0.08M ALANINE REMARK 280 (RACEMIC); 0.08M GLYCINE; 0.08M LYSINE HCL (RACEMIC); 0.08M REMARK 280 SERINE (RACEMIC), 0.08M TRIS, 0.08M BICINE, 10% V/V MPD; 10% PEG REMARK 280 1000; 10% W/V PEG 3350 AT PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.95433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.90867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.93150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.88583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 10.97717 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 459 REMARK 465 PRO A 460 REMARK 465 GLY A 461 REMARK 465 SER A 462 REMARK 465 ALA A 463 REMARK 465 LEU A 464 REMARK 465 ARG A 465 REMARK 465 GLU A 466 REMARK 465 THR A 467 REMARK 465 MET A 550 REMARK 465 TRP A 551 REMARK 465 PHE A 552 REMARK 465 GLY A 553 REMARK 465 GLU A 554 REMARK 465 ALA A 585 REMARK 465 ARG A 586 REMARK 465 GLY A 587 REMARK 465 GLY A 588 REMARK 465 ASN A 589 REMARK 465 ILE A 590 REMARK 465 GLY A 591 REMARK 465 ASP A 592 REMARK 465 GLY A 593 REMARK 465 GLY A 594 REMARK 465 GLY A 595 REMARK 465 ARG A 713 REMARK 465 GLN A 714 REMARK 465 THR A 715 REMARK 465 ASN A 716 REMARK 465 PRO A 717 REMARK 465 SER A 718 REMARK 465 ALA A 719 REMARK 465 MET A 720 REMARK 465 GLU A 721 REMARK 465 VAL A 722 REMARK 465 GLU A 723 REMARK 465 GLU A 724 REMARK 465 ASP A 725 REMARK 465 ASP A 726 REMARK 465 GLN A 764 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLU A 607 O HOH A 901 2.14 REMARK 500 OG1 THR A 525 O HOH A 902 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 579 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 LEU A 647 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 493 -37.79 -138.23 REMARK 500 GLU A 546 14.05 -66.89 REMARK 500 LEU A 547 39.73 -95.62 REMARK 500 ARG A 638 -127.29 -113.63 REMARK 500 ASP A 640 -81.37 -17.34 REMARK 500 ASP A 649 -171.97 -68.37 REMARK 500 THR A 679 34.48 -140.44 REMARK 500 ARG A 709 3.89 -65.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 501 LYS A 502 149.48 REMARK 500 LEU A 504 LYS A 505 -148.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 911 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 912 DISTANCE = 7.25 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 808 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 624 OD1 REMARK 620 2 ADP A 807 O3B 141.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AWD A 809 DBREF 6G2W A 462 764 UNP P55072 TERA_HUMAN 462 764 SEQADV 6G2W GLY A 459 UNP P55072 EXPRESSION TAG SEQADV 6G2W PRO A 460 UNP P55072 EXPRESSION TAG SEQADV 6G2W GLY A 461 UNP P55072 EXPRESSION TAG SEQRES 1 A 306 GLY PRO GLY SER ALA LEU ARG GLU THR VAL VAL GLU VAL SEQRES 2 A 306 PRO GLN VAL THR TRP GLU ASP ILE GLY GLY LEU GLU ASP SEQRES 3 A 306 VAL LYS ARG GLU LEU GLN GLU LEU VAL GLN TYR PRO VAL SEQRES 4 A 306 GLU HIS PRO ASP LYS PHE LEU LYS PHE GLY MET THR PRO SEQRES 5 A 306 SER LYS GLY VAL LEU PHE TYR GLY PRO PRO GLY CYS GLY SEQRES 6 A 306 LYS THR LEU LEU ALA LYS ALA ILE ALA ASN GLU CYS GLN SEQRES 7 A 306 ALA ASN PHE ILE SER ILE LYS GLY PRO GLU LEU LEU THR SEQRES 8 A 306 MET TRP PHE GLY GLU SER GLU ALA ASN VAL ARG GLU ILE SEQRES 9 A 306 PHE ASP LYS ALA ARG GLN ALA ALA PRO CYS VAL LEU PHE SEQRES 10 A 306 PHE ASP GLU LEU ASP SER ILE ALA LYS ALA ARG GLY GLY SEQRES 11 A 306 ASN ILE GLY ASP GLY GLY GLY ALA ALA ASP ARG VAL ILE SEQRES 12 A 306 ASN GLN ILE LEU THR GLU MET ASP GLY MET SER THR LYS SEQRES 13 A 306 LYS ASN VAL PHE ILE ILE GLY ALA THR ASN ARG PRO ASP SEQRES 14 A 306 ILE ILE ASP PRO ALA ILE LEU ARG PRO GLY ARG LEU ASP SEQRES 15 A 306 GLN LEU ILE TYR ILE PRO LEU PRO ASP GLU LYS SER ARG SEQRES 16 A 306 VAL ALA ILE LEU LYS ALA ASN LEU ARG LYS SER PRO VAL SEQRES 17 A 306 ALA LYS ASP VAL ASP LEU GLU PHE LEU ALA LYS MET THR SEQRES 18 A 306 ASN GLY PHE SER GLY ALA ASP LEU THR GLU ILE CYS GLN SEQRES 19 A 306 ARG ALA CYS LYS LEU ALA ILE ARG GLU SER ILE GLU SER SEQRES 20 A 306 GLU ILE ARG ARG GLU ARG GLU ARG GLN THR ASN PRO SER SEQRES 21 A 306 ALA MET GLU VAL GLU GLU ASP ASP PRO VAL PRO GLU ILE SEQRES 22 A 306 ARG ARG ASP HIS PHE GLU GLU ALA MET ARG PHE ALA ARG SEQRES 23 A 306 ARG SER VAL SER ASP ASN ASP ILE ARG LYS TYR GLU MET SEQRES 24 A 306 PHE ALA GLN THR LEU GLN GLN HET MPD A 801 8 HET MPD A 802 8 HET MPD A 803 8 HET MPD A 804 8 HET DMS A 805 4 HET DMS A 806 4 HET ADP A 807 27 HET NA A 808 1 HET AWD A 809 17 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM NA SODIUM ION HETNAM AWD ~{N}-(4-FLUOROPHENYL)-4-METHYL-PIPERAZINE-1-CARBOXAMIDE FORMUL 2 MPD 4(C6 H14 O2) FORMUL 6 DMS 2(C2 H6 O S) FORMUL 8 ADP C10 H15 N5 O10 P2 FORMUL 9 NA NA 1+ FORMUL 10 AWD C12 H16 F N3 O FORMUL 11 HOH *12(H2 O) HELIX 1 AA1 THR A 475 ILE A 479 5 5 HELIX 2 AA2 LEU A 482 HIS A 499 1 18 HELIX 3 AA3 HIS A 499 LEU A 504 1 6 HELIX 4 AA4 GLY A 523 CYS A 535 1 13 HELIX 5 AA5 PRO A 545 LEU A 547 5 3 HELIX 6 AA6 GLU A 556 ALA A 569 1 14 HELIX 7 AA7 ALA A 597 GLY A 610 1 14 HELIX 8 AA8 SER A 612 LYS A 615 5 4 HELIX 9 AA9 ARG A 625 ILE A 629 5 5 HELIX 10 AB1 ASP A 630 ARG A 635 5 6 HELIX 11 AB2 ASP A 649 LEU A 661 1 13 HELIX 12 AB3 ASP A 671 MET A 678 1 8 HELIX 13 AB4 SER A 683 ARG A 709 1 27 HELIX 14 AB5 ARG A 732 ARG A 741 1 10 HELIX 15 AB6 SER A 748 THR A 761 1 14 SHEET 1 AA1 5 ASN A 538 LYS A 543 0 SHEET 2 AA1 5 CYS A 572 ASP A 577 1 O VAL A 573 N ASN A 538 SHEET 3 AA1 5 VAL A 617 THR A 623 1 O ILE A 620 N PHE A 576 SHEET 4 AA1 5 GLY A 513 TYR A 517 1 N PHE A 516 O GLY A 621 SHEET 5 AA1 5 GLN A 641 TYR A 644 1 O GLN A 641 N LEU A 515 LINK OD1AASN A 624 NA NA A 808 1555 1555 2.28 LINK O3B ADP A 807 NA NA A 808 1555 1555 2.83 CISPEP 1 ALA A 570 PRO A 571 0 -14.10 SITE 1 AC1 6 PHE A 506 PRO A 665 ILE A 699 VAL A 728 SITE 2 AC1 6 PRO A 729 MET A 757 SITE 1 AC2 6 LEU A 515 LEU A 579 ALA A 583 ILE A 628 SITE 2 AC2 6 ILE A 629 ASP A 630 SITE 1 AC3 3 ASN A 616 ASP A 671 ARG A 733 SITE 1 AC4 4 CYS A 535 PRO A 571 ASN A 616 LYS A 677 SITE 1 AC5 1 CYS A 691 SITE 1 AC6 3 ARG A 662 ASN A 680 GLY A 681 SITE 1 AC7 15 ASP A 478 ILE A 479 GLY A 480 GLY A 521 SITE 2 AC7 15 CYS A 522 GLY A 523 LYS A 524 THR A 525 SITE 3 AC7 15 LEU A 526 ILE A 656 ASN A 660 GLY A 684 SITE 4 AC7 15 ALA A 685 THR A 688 NA A 808 SITE 1 AC8 4 PRO A 520 LYS A 524 ASN A 624 ADP A 807 SITE 1 AC9 4 ARG A 625 ASP A 627 LYS A 754 TYR A 755 CRYST1 92.103 92.103 65.863 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010857 0.006269 0.000000 0.00000 SCALE2 0.000000 0.012537 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015183 0.00000