HEADER HYDROLASE 23-MAR-18 6G2Y TITLE CRYSTAL STRUCTURE OF THE P97 D2 DOMAIN IN A HELICAL SPLIT-WASHER TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TER ATPASE,15S MG(2+)-ATPASE P97 SUBUNIT,VALOSIN-CONTAINING COMPND 5 PROTEIN,VCP; COMPND 6 EC: 3.6.4.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VCP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPASE, P97, PROTEIN DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.STACH,R.M.L.MORGAN,P.S.FREEMONT REVDAT 3 17-JAN-24 6G2Y 1 REMARK REVDAT 2 22-APR-20 6G2Y 1 JRNL REVDAT 1 10-APR-19 6G2Y 0 JRNL AUTH L.STACH,R.M.MORGAN,L.MAKHLOUF,A.DOUANGAMATH,F.VON DELFT, JRNL AUTH 2 X.ZHANG,P.S.FREEMONT JRNL TITL CRYSTAL STRUCTURE OF THE CATALYTIC D2 DOMAIN OF THE AAA+ JRNL TITL 2 ATPASE P97 REVEALS A PUTATIVE HELICAL SPLIT-WASHER-TYPE JRNL TITL 3 MECHANISM FOR SUBSTRATE UNFOLDING. JRNL REF FEBS LETT. V. 594 933 2020 JRNL REFN ISSN 0014-5793 JRNL PMID 31701538 JRNL DOI 10.1002/1873-3468.13667 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 18227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.5154 - 3.9115 1.00 2960 157 0.1929 0.2106 REMARK 3 2 3.9115 - 3.1048 1.00 2922 153 0.2342 0.2777 REMARK 3 3 3.1048 - 2.7124 1.00 2876 165 0.2530 0.2791 REMARK 3 4 2.7124 - 2.4644 0.99 2882 140 0.2587 0.2805 REMARK 3 5 2.4644 - 2.2878 0.98 2828 156 0.2511 0.2907 REMARK 3 6 2.2878 - 2.1529 0.98 2850 138 0.2690 0.3024 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2227 REMARK 3 ANGLE : 1.096 3008 REMARK 3 CHIRALITY : 0.059 335 REMARK 3 PLANARITY : 0.006 383 REMARK 3 DIHEDRAL : 7.131 1916 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6G2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18067 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.153 REMARK 200 RESOLUTION RANGE LOW (A) : 51.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FTJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08M L-NA-GLUTAMATE; 0.08M ALANINE REMARK 280 (RACEMIC); 0.08M GLYCINE; 0.08M LYSINE HCL (RACEMIC); 0.08M REMARK 280 SERINE (RACEMIC), 0.08M TRIS, 0.08M BICINE, 10% V/V MPD; 10% PEG REMARK 280 1000; 10% W/V PEG 3350 AT PH 8.5, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.08867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.17733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.13300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.22167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.04433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 462 REMARK 465 ALA A 463 REMARK 465 LEU A 464 REMARK 465 ARG A 465 REMARK 465 GLU A 466 REMARK 465 THR A 467 REMARK 465 MET A 550 REMARK 465 TRP A 551 REMARK 465 PHE A 552 REMARK 465 GLY A 553 REMARK 465 GLU A 554 REMARK 465 ALA A 585 REMARK 465 ARG A 586 REMARK 465 GLY A 587 REMARK 465 GLY A 588 REMARK 465 ASN A 589 REMARK 465 ILE A 590 REMARK 465 GLY A 591 REMARK 465 ASP A 592 REMARK 465 GLY A 593 REMARK 465 GLY A 594 REMARK 465 GLY A 595 REMARK 465 ARG A 713 REMARK 465 GLN A 714 REMARK 465 THR A 715 REMARK 465 ASN A 716 REMARK 465 PRO A 717 REMARK 465 SER A 718 REMARK 465 ALA A 719 REMARK 465 MET A 720 REMARK 465 GLU A 721 REMARK 465 VAL A 722 REMARK 465 GLU A 723 REMARK 465 GLU A 724 REMARK 465 ASP A 725 REMARK 465 ASP A 726 REMARK 465 GLN A 764 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 543 OE1 GLU A 578 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 638 -134.09 -115.22 REMARK 500 PHE A 742 54.80 -101.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 599 VAL A 600 142.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 808 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 624 OD1 REMARK 620 2 ADP A 807 O3B 156.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ELQ A 809 DBREF 6G2Y A 462 764 UNP P55072 TERA_HUMAN 462 764 SEQRES 1 A 303 SER ALA LEU ARG GLU THR VAL VAL GLU VAL PRO GLN VAL SEQRES 2 A 303 THR TRP GLU ASP ILE GLY GLY LEU GLU ASP VAL LYS ARG SEQRES 3 A 303 GLU LEU GLN GLU LEU VAL GLN TYR PRO VAL GLU HIS PRO SEQRES 4 A 303 ASP LYS PHE LEU LYS PHE GLY MET THR PRO SER LYS GLY SEQRES 5 A 303 VAL LEU PHE TYR GLY PRO PRO GLY CYS GLY LYS THR LEU SEQRES 6 A 303 LEU ALA LYS ALA ILE ALA ASN GLU CYS GLN ALA ASN PHE SEQRES 7 A 303 ILE SER ILE LYS GLY PRO GLU LEU LEU THR MET TRP PHE SEQRES 8 A 303 GLY GLU SER GLU ALA ASN VAL ARG GLU ILE PHE ASP LYS SEQRES 9 A 303 ALA ARG GLN ALA ALA PRO CYS VAL LEU PHE PHE ASP GLU SEQRES 10 A 303 LEU ASP SER ILE ALA LYS ALA ARG GLY GLY ASN ILE GLY SEQRES 11 A 303 ASP GLY GLY GLY ALA ALA ASP ARG VAL ILE ASN GLN ILE SEQRES 12 A 303 LEU THR GLU MET ASP GLY MET SER THR LYS LYS ASN VAL SEQRES 13 A 303 PHE ILE ILE GLY ALA THR ASN ARG PRO ASP ILE ILE ASP SEQRES 14 A 303 PRO ALA ILE LEU ARG PRO GLY ARG LEU ASP GLN LEU ILE SEQRES 15 A 303 TYR ILE PRO LEU PRO ASP GLU LYS SER ARG VAL ALA ILE SEQRES 16 A 303 LEU LYS ALA ASN LEU ARG LYS SER PRO VAL ALA LYS ASP SEQRES 17 A 303 VAL ASP LEU GLU PHE LEU ALA LYS MET THR ASN GLY PHE SEQRES 18 A 303 SER GLY ALA ASP LEU THR GLU ILE CYS GLN ARG ALA CYS SEQRES 19 A 303 LYS LEU ALA ILE ARG GLU SER ILE GLU SER GLU ILE ARG SEQRES 20 A 303 ARG GLU ARG GLU ARG GLN THR ASN PRO SER ALA MET GLU SEQRES 21 A 303 VAL GLU GLU ASP ASP PRO VAL PRO GLU ILE ARG ARG ASP SEQRES 22 A 303 HIS PHE GLU GLU ALA MET ARG PHE ALA ARG ARG SER VAL SEQRES 23 A 303 SER ASP ASN ASP ILE ARG LYS TYR GLU MET PHE ALA GLN SEQRES 24 A 303 THR LEU GLN GLN HET MPD A 801 8 HET MPD A 802 8 HET MPD A 803 8 HET MPD A 804 8 HET DMS A 805 4 HET DMS A 806 4 HET ADP A 807 27 HET NA A 808 1 HET ELQ A 809 17 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM NA SODIUM ION HETNAM ELQ [3,4-BIS(FLUORANYL)PHENYL]-(4-METHYLPIPERAZIN-1-YL) HETNAM 2 ELQ METHANONE FORMUL 2 MPD 4(C6 H14 O2) FORMUL 6 DMS 2(C2 H6 O S) FORMUL 8 ADP C10 H15 N5 O10 P2 FORMUL 9 NA NA 1+ FORMUL 10 ELQ C12 H14 F2 N2 O FORMUL 11 HOH *12(H2 O) HELIX 1 AA1 THR A 475 ILE A 479 5 5 HELIX 2 AA2 LEU A 482 HIS A 499 1 18 HELIX 3 AA3 HIS A 499 PHE A 506 1 8 HELIX 4 AA4 GLY A 523 CYS A 535 1 13 HELIX 5 AA5 PRO A 545 LEU A 548 5 4 HELIX 6 AA6 ALA A 557 ALA A 569 1 13 HELIX 7 AA7 ALA A 597 GLY A 610 1 14 HELIX 8 AA8 SER A 612 LYS A 615 5 4 HELIX 9 AA9 ARG A 625 ILE A 629 5 5 HELIX 10 AB1 ASP A 630 ARG A 635 5 6 HELIX 11 AB2 ASP A 649 LEU A 661 1 13 HELIX 12 AB3 ASP A 671 MET A 678 1 8 HELIX 13 AB4 SER A 683 GLU A 710 1 28 HELIX 14 AB5 ARG A 732 MET A 740 1 9 HELIX 15 AB6 ARG A 741 ALA A 743 5 3 HELIX 16 AB7 SER A 748 LEU A 762 1 15 SHEET 1 AA1 5 ASN A 538 LYS A 543 0 SHEET 2 AA1 5 CYS A 572 ASP A 577 1 O VAL A 573 N ASN A 538 SHEET 3 AA1 5 VAL A 617 THR A 623 1 O ILE A 620 N PHE A 576 SHEET 4 AA1 5 GLY A 513 TYR A 517 1 N PHE A 516 O GLY A 621 SHEET 5 AA1 5 LEU A 642 TYR A 644 1 O ILE A 643 N LEU A 515 LINK OD1AASN A 624 NA NA A 808 1555 1555 2.25 LINK O3B ADP A 807 NA NA A 808 1555 1555 3.09 CISPEP 1 ALA A 570 PRO A 571 0 -7.06 SITE 1 AC1 4 PHE A 506 PRO A 665 ILE A 699 PRO A 729 SITE 1 AC2 6 LEU A 579 ALA A 583 ILE A 601 ILE A 628 SITE 2 AC2 6 ILE A 629 ASP A 630 SITE 1 AC3 3 ASN A 616 ASP A 671 ARG A 733 SITE 1 AC4 2 CYS A 535 ASN A 616 SITE 1 AC5 2 ASN A 680 GLY A 681 SITE 1 AC6 13 ASP A 478 GLY A 480 GLY A 521 CYS A 522 SITE 2 AC6 13 GLY A 523 LYS A 524 THR A 525 LEU A 526 SITE 3 AC6 13 ILE A 656 GLY A 684 ALA A 685 THR A 688 SITE 4 AC6 13 NA A 808 SITE 1 AC7 4 PRO A 520 LYS A 524 ASN A 624 ADP A 807 SITE 1 AC8 5 ARG A 625 ASP A 627 ASP A 751 LYS A 754 SITE 2 AC8 5 TYR A 755 CRYST1 94.502 94.502 66.266 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010582 0.006109 0.000000 0.00000 SCALE2 0.000000 0.012219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015091 0.00000