HEADER IMMUNE SYSTEM 26-MAR-18 6G3K TITLE MHC A02 ALLELE PRESENTING MTSAIGILPV COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: MHC CLASS I ANTIGEN A*2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ILE-THR-SER-GLY-ILE-GLY-VAL-LEU-PRO-VAL; COMPND 12 CHAIN: C, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-A, HLAA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_TAXID: 9606 KEYWDS MHCI, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.RIZKALLAH,A.K.SEWELL REVDAT 2 17-JAN-24 6G3K 1 REMARK REVDAT 1 04-SEP-19 6G3K 0 JRNL AUTH S.A.E.GALLOWAY,G.DOLTON,M.ATTAF,A.WALL,A.FULLER,C.RIUS, JRNL AUTH 2 V.BIANCHI,S.THEAKER,A.LLOYD,M.E.CAILLAUD,I.M.SVANE,M.DONIA, JRNL AUTH 3 D.K.COLE,B.SZOMOLAY,P.RIZKALLAH,A.K.SEWELL JRNL TITL PEPTIDE SUPER-AGONIST ENHANCES T-CELL RESPONSES TO MELANOMA. JRNL REF FRONT IMMUNOL V. 10 319 2019 JRNL REFN ESSN 1664-3224 JRNL PMID 30930889 JRNL DOI 10.3389/FIMMU.2019.00319 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 20791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1074 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1405 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.4600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6316 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.79000 REMARK 3 B22 (A**2) : 3.90000 REMARK 3 B33 (A**2) : 1.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.482 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.405 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 47.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6512 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5686 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8840 ; 1.939 ; 1.922 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13183 ; 1.132 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 768 ; 8.360 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 345 ;34.292 ;23.130 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1055 ;21.130 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;16.337 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 903 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7308 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1460 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3087 ; 1.659 ; 3.315 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3086 ; 1.651 ; 3.314 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3850 ; 2.800 ; 4.964 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3851 ; 2.802 ; 4.965 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3425 ; 1.729 ; 3.497 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3425 ; 1.726 ; 3.497 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4990 ; 2.914 ; 5.180 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7077 ; 4.858 ;37.183 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7078 ; 4.858 ;37.193 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 276 D 1 276 17210 0.06 0.05 REMARK 3 2 B 0 99 E 0 99 6130 0.05 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 180 REMARK 3 RESIDUE RANGE : C 1 C 9 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6647 30.8024 12.1330 REMARK 3 T TENSOR REMARK 3 T11: 0.3677 T22: 0.0475 REMARK 3 T33: 0.2600 T12: 0.0191 REMARK 3 T13: -0.1676 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 3.9592 L22: 5.7762 REMARK 3 L33: 2.8893 L12: -0.2458 REMARK 3 L13: -0.3043 L23: 1.3128 REMARK 3 S TENSOR REMARK 3 S11: 0.0544 S12: 0.3020 S13: -0.7433 REMARK 3 S21: -0.2780 S22: 0.0028 S23: 0.5674 REMARK 3 S31: 0.0908 S32: -0.2473 S33: -0.0572 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 181 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): 42.3176 9.5610 25.7456 REMARK 3 T TENSOR REMARK 3 T11: 0.7895 T22: 0.3488 REMARK 3 T33: 0.5276 T12: 0.0559 REMARK 3 T13: -0.1279 T23: 0.1422 REMARK 3 L TENSOR REMARK 3 L11: 5.8253 L22: 4.2258 REMARK 3 L33: 6.9645 L12: -0.3062 REMARK 3 L13: -0.6762 L23: -1.4585 REMARK 3 S TENSOR REMARK 3 S11: 0.0739 S12: -1.2857 S13: -0.6112 REMARK 3 S21: 0.5770 S22: -0.1760 S23: -0.0091 REMARK 3 S31: 0.6409 S32: 0.7948 S33: 0.1021 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): 43.8195 26.6622 10.9404 REMARK 3 T TENSOR REMARK 3 T11: 0.3105 T22: 0.1359 REMARK 3 T33: 0.1171 T12: 0.0223 REMARK 3 T13: -0.1182 T23: -0.0708 REMARK 3 L TENSOR REMARK 3 L11: 9.1655 L22: 4.6896 REMARK 3 L33: 3.5449 L12: -2.8112 REMARK 3 L13: -1.9781 L23: 0.7820 REMARK 3 S TENSOR REMARK 3 S11: 0.1445 S12: 0.0394 S13: 0.0742 REMARK 3 S21: -0.2494 S22: 0.1640 S23: -0.4068 REMARK 3 S31: 0.1379 S32: 0.6295 S33: -0.3084 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 180 REMARK 3 RESIDUE RANGE : F 1 F 9 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9799 54.7950 37.4068 REMARK 3 T TENSOR REMARK 3 T11: 0.3223 T22: 0.0514 REMARK 3 T33: 0.2680 T12: 0.0218 REMARK 3 T13: 0.1698 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 3.4037 L22: 6.0332 REMARK 3 L33: 3.1056 L12: -0.0539 REMARK 3 L13: 0.2226 L23: -1.6838 REMARK 3 S TENSOR REMARK 3 S11: 0.0757 S12: 0.2486 S13: 0.6288 REMARK 3 S21: -0.2157 S22: 0.0733 S23: -0.5307 REMARK 3 S31: -0.0897 S32: 0.2578 S33: -0.1490 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 181 D 276 REMARK 3 ORIGIN FOR THE GROUP (A): 21.4243 76.3076 50.9902 REMARK 3 T TENSOR REMARK 3 T11: 0.6253 T22: 0.3088 REMARK 3 T33: 0.4139 T12: 0.0530 REMARK 3 T13: 0.0605 T23: -0.1044 REMARK 3 L TENSOR REMARK 3 L11: 8.1313 L22: 4.3891 REMARK 3 L33: 7.1324 L12: -0.6768 REMARK 3 L13: -1.1834 L23: 1.6219 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: -1.3803 S13: 0.5406 REMARK 3 S21: 0.4773 S22: -0.0989 S23: 0.0059 REMARK 3 S31: -0.5338 S32: -0.5113 S33: 0.0301 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 0 E 99 REMARK 3 ORIGIN FOR THE GROUP (A): 19.8158 59.0380 36.1702 REMARK 3 T TENSOR REMARK 3 T11: 0.2949 T22: 0.1068 REMARK 3 T33: 0.0973 T12: 0.0151 REMARK 3 T13: 0.0924 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 8.0901 L22: 4.8384 REMARK 3 L33: 4.0338 L12: -2.6522 REMARK 3 L13: 2.0597 L23: -0.6067 REMARK 3 S TENSOR REMARK 3 S11: 0.1062 S12: 0.0092 S13: -0.0381 REMARK 3 S21: -0.2640 S22: 0.1552 S23: 0.3951 REMARK 3 S31: -0.0881 S32: -0.5883 S33: -0.2614 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6G3K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009350. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96895 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2, XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 50.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 1.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EU5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 59.99000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 85.54500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.99000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 85.54500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 17 O ASP E 59 1554 2.11 REMARK 500 NH2 ARG A 273 OD2 ASP D 220 3547 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP E 53 CB ASP E 53 CG 0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 17 130.45 172.36 REMARK 500 ASP A 29 -109.42 47.28 REMARK 500 ASN A 86 66.28 29.93 REMARK 500 HIS A 114 113.38 -166.43 REMARK 500 GLU A 128 38.72 -86.08 REMARK 500 LEU A 130 103.98 -53.92 REMARK 500 SER A 195 -150.66 -126.38 REMARK 500 SER A 207 70.26 38.66 REMARK 500 ILE A 213 139.55 -171.84 REMARK 500 GLN A 224 76.40 -151.24 REMARK 500 ASP A 227 1.25 84.83 REMARK 500 GLN A 253 37.91 -143.99 REMARK 500 ASN B 17 130.43 -35.98 REMARK 500 SER B 88 -74.81 -53.54 REMARK 500 ASP B 98 35.25 -89.43 REMARK 500 ARG D 17 67.44 178.43 REMARK 500 ASP D 29 -110.25 47.30 REMARK 500 ASN D 86 65.57 28.87 REMARK 500 HIS D 114 112.73 -166.03 REMARK 500 SER D 195 -154.31 -125.50 REMARK 500 SER D 207 70.37 38.71 REMARK 500 ILE D 213 139.25 -172.59 REMARK 500 ASP D 227 -0.52 85.45 REMARK 500 GLN D 253 36.82 -143.87 REMARK 500 ASN E 17 131.24 -38.18 REMARK 500 TRP E 60 -1.42 71.69 REMARK 500 SER E 88 -75.59 -53.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 130 ARG A 131 -125.67 REMARK 500 REMARK 500 REMARK: NULL DBREF 6G3K A 1 276 UNP P01892 1A02_HUMAN 25 300 DBREF 6G3K B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6G3K C 1 10 PDB 6G3K 6G3K 1 10 DBREF 6G3K D 1 276 UNP P01892 1A02_HUMAN 25 300 DBREF 6G3K E 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6G3K F 1 10 PDB 6G3K 6G3K 1 10 SEQADV 6G3K MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 6G3K MET E 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 276 GLY SER HIS SER MET ARG TYR PHE PHE THR SER VAL SER SEQRES 2 A 276 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 276 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 276 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 276 GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR ARG SEQRES 6 A 276 LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL ASP LEU SEQRES 7 A 276 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 276 SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 276 SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 A 276 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 A 276 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 A 276 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN LEU SEQRES 13 A 276 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 A 276 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 A 276 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 A 276 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 A 276 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 276 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 276 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 276 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 276 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 276 TRP GLU PRO SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 10 ILE THR SER GLY ILE GLY VAL LEU PRO VAL SEQRES 1 D 276 GLY SER HIS SER MET ARG TYR PHE PHE THR SER VAL SER SEQRES 2 D 276 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 D 276 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 D 276 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 D 276 GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR ARG SEQRES 6 D 276 LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL ASP LEU SEQRES 7 D 276 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 D 276 SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 D 276 SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 D 276 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 D 276 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 D 276 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN LEU SEQRES 13 D 276 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 D 276 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 D 276 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 D 276 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 D 276 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 D 276 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 D 276 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 D 276 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 D 276 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 D 276 TRP GLU PRO SEQRES 1 E 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 E 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 E 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 E 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 E 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 E 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 E 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 E 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 F 10 ILE THR SER GLY ILE GLY VAL LEU PRO VAL FORMUL 7 HOH *33(H2 O) HELIX 1 AA1 GLY A 56 ASN A 86 1 31 HELIX 2 AA2 ASP A 137 ALA A 150 1 14 HELIX 3 AA3 HIS A 151 GLY A 162 1 12 HELIX 4 AA4 GLY A 162 GLY A 175 1 14 HELIX 5 AA5 GLY A 175 GLN A 180 1 6 HELIX 6 AA6 GLY D 56 ASN D 86 1 31 HELIX 7 AA7 ASP D 137 ALA D 150 1 14 HELIX 8 AA8 HIS D 151 GLY D 162 1 12 HELIX 9 AA9 GLY D 162 GLY D 175 1 14 HELIX 10 AB1 GLY D 175 GLN D 180 1 6 SHEET 1 AA1 8 MET A 45 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N ALA A 24 O PHE A 36 SHEET 4 AA1 8 HIS A 3 VAL A 12 -1 N PHE A 8 O VAL A 25 SHEET 5 AA1 8 THR A 94 VAL A 103 -1 O TYR A 99 N TYR A 7 SHEET 6 AA1 8 PHE A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O TYR A 123 N TYR A 116 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 ALA A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O LYS A 243 N ALA A 205 SHEET 4 AA2 4 THR A 228 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA3 3 THR A 214 ARG A 219 0 SHEET 2 AA3 3 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 3 AA3 3 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA4 4 LYS B 6 SER B 11 0 SHEET 2 AA4 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA4 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA4 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA5 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA6 4 GLU B 44 ARG B 45 0 SHEET 2 AA6 4 ILE B 35 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA6 4 TYR B 78 HIS B 84 -1 O ASN B 83 N GLU B 36 SHEET 4 AA6 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 AA7 8 GLU D 46 PRO D 47 0 SHEET 2 AA7 8 THR D 31 ASP D 37 -1 N ARG D 35 O GLU D 46 SHEET 3 AA7 8 ARG D 21 VAL D 28 -1 N ALA D 24 O PHE D 36 SHEET 4 AA7 8 HIS D 3 VAL D 12 -1 N PHE D 8 O VAL D 25 SHEET 5 AA7 8 THR D 94 VAL D 103 -1 O TYR D 99 N TYR D 7 SHEET 6 AA7 8 PHE D 109 TYR D 118 -1 O LEU D 110 N ASP D 102 SHEET 7 AA7 8 LYS D 121 LEU D 126 -1 O TYR D 123 N TYR D 116 SHEET 8 AA7 8 TRP D 133 ALA D 135 -1 O THR D 134 N ALA D 125 SHEET 1 AA8 4 LYS D 186 ALA D 193 0 SHEET 2 AA8 4 GLU D 198 PHE D 208 -1 O ARG D 202 N THR D 190 SHEET 3 AA8 4 PHE D 241 PRO D 250 -1 O LYS D 243 N ALA D 205 SHEET 4 AA8 4 THR D 228 PRO D 235 -1 N ARG D 234 O GLN D 242 SHEET 1 AA9 3 THR D 214 ARG D 219 0 SHEET 2 AA9 3 TYR D 257 GLN D 262 -1 O HIS D 260 N THR D 216 SHEET 3 AA9 3 LEU D 270 LEU D 272 -1 O LEU D 272 N CYS D 259 SHEET 1 AB1 4 LYS E 6 SER E 11 0 SHEET 2 AB1 4 ASN E 21 PHE E 30 -1 O ASN E 24 N TYR E 10 SHEET 3 AB1 4 PHE E 62 PHE E 70 -1 O PHE E 70 N ASN E 21 SHEET 4 AB1 4 GLU E 50 HIS E 51 -1 N GLU E 50 O TYR E 67 SHEET 1 AB2 4 LYS E 6 SER E 11 0 SHEET 2 AB2 4 ASN E 21 PHE E 30 -1 O ASN E 24 N TYR E 10 SHEET 3 AB2 4 PHE E 62 PHE E 70 -1 O PHE E 70 N ASN E 21 SHEET 4 AB2 4 SER E 55 PHE E 56 -1 N SER E 55 O TYR E 63 SHEET 1 AB3 4 GLU E 44 ARG E 45 0 SHEET 2 AB3 4 ILE E 35 LYS E 41 -1 N LYS E 41 O GLU E 44 SHEET 3 AB3 4 TYR E 78 HIS E 84 -1 O ASN E 83 N GLU E 36 SHEET 4 AB3 4 LYS E 91 LYS E 94 -1 O VAL E 93 N CYS E 80 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.11 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.10 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.05 SSBOND 4 CYS D 101 CYS D 164 1555 1555 2.11 SSBOND 5 CYS D 203 CYS D 259 1555 1555 2.07 SSBOND 6 CYS E 25 CYS E 80 1555 1555 2.06 CISPEP 1 TYR A 209 PRO A 210 0 -4.40 CISPEP 2 HIS B 31 PRO B 32 0 -1.18 CISPEP 3 TYR D 209 PRO D 210 0 -4.19 CISPEP 4 HIS E 31 PRO E 32 0 -0.24 CRYST1 119.980 171.090 50.580 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008335 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005845 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019771 0.00000