HEADER TRANSFERASE 27-MAR-18 6G4F TITLE CRYSTAL STRUCTURE OF THE OMEGA TRANSAMINASE FROM PSEUDOMONAS JESSENII TITLE 2 IN COMPLEX WITH PMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE AMINOTRANSFERASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: PROTEIN CONTAINS C-TERMINAL PGG LINKER AND 6-HIS TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SP; SOURCE 3 ORGANISM_TAXID: 306; SOURCE 4 GENE: CMK94_18730; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20B(+) KEYWDS TRANSAMINASE, AMINOTRANSFERASE, PYRIDOXAMINE PHOSPHATE, PLP- KEYWDS 2 DEPENDENT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.ROZEBOOM,D.B.JANSSEN REVDAT 4 01-MAY-24 6G4F 1 REMARK REVDAT 3 30-OCT-19 6G4F 1 JRNL REVDAT 2 19-JUN-19 6G4F 1 JRNL REVDAT 1 10-APR-19 6G4F 0 JRNL AUTH C.M.PALACIO,H.J.ROZEBOOM,E.LANFRANCHI,Q.MENG,M.OTZEN, JRNL AUTH 2 D.B.JANSSEN JRNL TITL BIOCHEMICAL PROPERTIES OF A PSEUDOMONAS AMINOTRANSFERASE JRNL TITL 2 INVOLVED IN CAPROLACTAM METABOLISM. JRNL REF FEBS J. V. 286 4086 2019 JRNL REFN ISSN 1742-464X JRNL PMID 31162815 JRNL DOI 10.1111/FEBS.14950 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1978 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2694 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 288 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.48000 REMARK 3 B22 (A**2) : 0.48000 REMARK 3 B33 (A**2) : -0.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.400 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.230 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.832 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7153 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6849 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9697 ; 1.308 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15756 ; 0.886 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 906 ; 5.983 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 312 ;36.590 ;24.103 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1163 ;13.680 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;14.383 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1054 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8183 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1645 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3624 ; 1.960 ; 3.705 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3623 ; 1.958 ; 3.704 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4530 ; 3.097 ; 5.551 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4531 ; 3.097 ; 5.552 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3529 ; 2.376 ; 3.983 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3529 ; 2.376 ; 3.983 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5168 ; 3.972 ; 5.866 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8345 ; 5.331 ;29.661 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8346 ; 5.330 ;29.665 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 6 455 B 6 455 27847 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6G4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : HELIOS MX MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38677 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: D_1200009303 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SODIUM SUCCINATE PH 7.5, 0.1 MM REMARK 280 PLP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.68600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.52900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.84300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 SER A 4 REMARK 465 VAL A 5 REMARK 465 GLY A 457 REMARK 465 GLY A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 465 HIS A 464 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLN B 3 REMARK 465 SER B 4 REMARK 465 VAL B 5 REMARK 465 HIS B 459 REMARK 465 HIS B 460 REMARK 465 HIS B 461 REMARK 465 HIS B 462 REMARK 465 HIS B 463 REMARK 465 HIS B 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 39.58 -157.60 REMARK 500 THR A 79 -63.92 -91.97 REMARK 500 HIS A 88 -1.42 70.60 REMARK 500 VAL A 181 -165.49 -106.19 REMARK 500 THR A 239 -1.38 72.33 REMARK 500 PHE A 264 49.03 72.87 REMARK 500 GLN A 279 78.65 -119.35 REMARK 500 SER A 286 -154.06 -164.19 REMARK 500 LYS A 287 -98.70 50.63 REMARK 500 SER A 291 28.56 48.27 REMARK 500 SER A 291 28.42 48.27 REMARK 500 HIS A 328 129.16 -38.96 REMARK 500 GLN A 396 -77.45 84.30 REMARK 500 CYS A 426 58.81 -153.69 REMARK 500 SER B 65 40.94 -157.36 REMARK 500 THR B 79 -62.55 -92.52 REMARK 500 HIS B 88 -3.25 73.46 REMARK 500 VAL B 181 -164.91 -107.16 REMARK 500 THR B 239 -1.37 72.27 REMARK 500 PHE B 264 49.74 73.33 REMARK 500 GLN B 279 79.21 -118.15 REMARK 500 SER B 286 -152.47 -163.94 REMARK 500 LYS B 287 -100.53 55.02 REMARK 500 SER B 291 28.02 48.67 REMARK 500 HIS B 328 128.58 -39.87 REMARK 500 GLN B 396 -133.69 50.05 REMARK 500 CYS B 426 58.99 -153.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PMP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6G4B RELATED DB: PDB REMARK 900 SUCCINATE REMARK 900 RELATED ID: 6G4C RELATED DB: PDB REMARK 900 PHOSPHATE REMARK 900 RELATED ID: 6G4D RELATED DB: PDB REMARK 900 PLP REMARK 900 RELATED ID: 6G4E RELATED DB: PDB REMARK 900 PLP-6ACA DBREF1 6G4F A 1 455 UNP A0A2D8IND4_PSESP DBREF2 6G4F A A0A2D8IND4 1 455 DBREF1 6G4F B 1 455 UNP A0A2D8IND4_PSESP DBREF2 6G4F B A0A2D8IND4 1 455 SEQADV 6G4F PRO A 456 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F GLY A 457 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F GLY A 458 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 459 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 460 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 461 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 462 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 463 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS A 464 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F PRO B 456 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F GLY B 457 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F GLY B 458 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 459 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 460 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 461 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 462 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 463 UNP A0A2D8IND EXPRESSION TAG SEQADV 6G4F HIS B 464 UNP A0A2D8IND EXPRESSION TAG SEQRES 1 A 464 MET ASN GLN SER VAL SER SER LEU PRO GLU LYS ASP ILE SEQRES 2 A 464 GLN TYR GLN LEU HIS PRO TYR THR ASN ALA ARG LEU HIS SEQRES 3 A 464 GLN GLU LEU GLY PRO LEU ILE ILE GLU ARG GLY GLU GLY SEQRES 4 A 464 ILE TYR VAL TYR ASP ASP GLN GLY LYS GLY TYR ILE GLU SEQRES 5 A 464 ALA MET ALA GLY LEU TRP SER ALA ALA LEU GLY PHE SER SEQRES 6 A 464 ASN GLN ARG LEU ILE LYS ALA ALA GLU GLN GLN PHE ASN SEQRES 7 A 464 THR LEU PRO PHE TYR HIS LEU PHE SER HIS LYS SER HIS SEQRES 8 A 464 ARG PRO SER ILE GLU LEU ALA GLU LYS LEU ILE GLU MET SEQRES 9 A 464 ALA PRO VAL PRO MET SER LYS VAL PHE PHE THR ASN SER SEQRES 10 A 464 GLY SER GLU ALA ASN ASP THR VAL VAL LYS MET VAL TRP SEQRES 11 A 464 TYR LEU ASN ASN ALA LEU GLY LYS PRO ALA LYS LYS LYS SEQRES 12 A 464 PHE ILE SER ARG VAL ASN GLY TYR HIS GLY ILE THR VAL SEQRES 13 A 464 ALA SER ALA SER LEU THR GLY LEU PRO GLY ASN GLN ARG SEQRES 14 A 464 GLY PHE ASP LEU PRO LEU PRO GLY PHE LEU HIS VAL GLY SEQRES 15 A 464 CYS PRO HIS HIS TYR ARG PHE ALA LEU ALA GLY GLU SER SEQRES 16 A 464 GLU GLU HIS PHE ALA ASP ARG LEU ALA VAL GLU LEU GLU SEQRES 17 A 464 GLN LYS ILE LEU ALA GLU GLY PRO GLU THR ILE ALA ALA SEQRES 18 A 464 PHE ILE GLY GLU PRO LEU MET GLY ALA GLY GLY VAL ILE SEQRES 19 A 464 VAL PRO PRO ARG THR TYR TRP GLU LYS ILE GLN LYS VAL SEQRES 20 A 464 CYS ARG LYS TYR ASP ILE LEU VAL ILE ALA ASP GLU VAL SEQRES 21 A 464 ILE CYS GLY PHE GLY ARG THR GLY GLN MET PHE GLY SER SEQRES 22 A 464 GLN THR PHE GLY ILE GLN PRO ASP ILE MET VAL LEU SER SEQRES 23 A 464 LYS GLN LEU SER SER SER TYR GLN PRO ILE ALA ALA ILE SEQRES 24 A 464 LEU ILE ASN ALA PRO VAL PHE GLU GLY ILE ALA ASP GLN SEQRES 25 A 464 SER GLN ALA LEU GLY ALA LEU GLY HIS GLY PHE THR GLY SEQRES 26 A 464 SER GLY HIS PRO VAL ALA THR ALA VAL ALA LEU GLU ASN SEQRES 27 A 464 LEU LYS ILE ILE GLU GLU GLU SER LEU VAL GLU HIS ALA SEQRES 28 A 464 ALA GLN MET GLY GLN LEU LEU ARG SER GLY LEU GLN HIS SEQRES 29 A 464 PHE ILE ASP HIS PRO LEU VAL GLY GLU ILE ARG GLY CYS SEQRES 30 A 464 GLY LEU ILE ALA ALA VAL GLU LEU VAL GLY ASP ARG VAL SEQRES 31 A 464 SER LYS ALA PRO TYR GLN ALA LEU GLY THR LEU GLY ARG SEQRES 32 A 464 TYR MET ALA GLY ARG ALA GLN GLU HIS GLY MET ILE THR SEQRES 33 A 464 ARG ALA MET GLY ASP ALA VAL ALA PHE CYS PRO PRO LEU SEQRES 34 A 464 ILE VAL ASN GLU GLN GLU VAL GLY MET ILE VAL GLU ARG SEQRES 35 A 464 PHE ALA ARG ALA LEU ASP ASP THR THR GLN TRP VAL GLY SEQRES 36 A 464 PRO GLY GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 464 MET ASN GLN SER VAL SER SER LEU PRO GLU LYS ASP ILE SEQRES 2 B 464 GLN TYR GLN LEU HIS PRO TYR THR ASN ALA ARG LEU HIS SEQRES 3 B 464 GLN GLU LEU GLY PRO LEU ILE ILE GLU ARG GLY GLU GLY SEQRES 4 B 464 ILE TYR VAL TYR ASP ASP GLN GLY LYS GLY TYR ILE GLU SEQRES 5 B 464 ALA MET ALA GLY LEU TRP SER ALA ALA LEU GLY PHE SER SEQRES 6 B 464 ASN GLN ARG LEU ILE LYS ALA ALA GLU GLN GLN PHE ASN SEQRES 7 B 464 THR LEU PRO PHE TYR HIS LEU PHE SER HIS LYS SER HIS SEQRES 8 B 464 ARG PRO SER ILE GLU LEU ALA GLU LYS LEU ILE GLU MET SEQRES 9 B 464 ALA PRO VAL PRO MET SER LYS VAL PHE PHE THR ASN SER SEQRES 10 B 464 GLY SER GLU ALA ASN ASP THR VAL VAL LYS MET VAL TRP SEQRES 11 B 464 TYR LEU ASN ASN ALA LEU GLY LYS PRO ALA LYS LYS LYS SEQRES 12 B 464 PHE ILE SER ARG VAL ASN GLY TYR HIS GLY ILE THR VAL SEQRES 13 B 464 ALA SER ALA SER LEU THR GLY LEU PRO GLY ASN GLN ARG SEQRES 14 B 464 GLY PHE ASP LEU PRO LEU PRO GLY PHE LEU HIS VAL GLY SEQRES 15 B 464 CYS PRO HIS HIS TYR ARG PHE ALA LEU ALA GLY GLU SER SEQRES 16 B 464 GLU GLU HIS PHE ALA ASP ARG LEU ALA VAL GLU LEU GLU SEQRES 17 B 464 GLN LYS ILE LEU ALA GLU GLY PRO GLU THR ILE ALA ALA SEQRES 18 B 464 PHE ILE GLY GLU PRO LEU MET GLY ALA GLY GLY VAL ILE SEQRES 19 B 464 VAL PRO PRO ARG THR TYR TRP GLU LYS ILE GLN LYS VAL SEQRES 20 B 464 CYS ARG LYS TYR ASP ILE LEU VAL ILE ALA ASP GLU VAL SEQRES 21 B 464 ILE CYS GLY PHE GLY ARG THR GLY GLN MET PHE GLY SER SEQRES 22 B 464 GLN THR PHE GLY ILE GLN PRO ASP ILE MET VAL LEU SER SEQRES 23 B 464 LYS GLN LEU SER SER SER TYR GLN PRO ILE ALA ALA ILE SEQRES 24 B 464 LEU ILE ASN ALA PRO VAL PHE GLU GLY ILE ALA ASP GLN SEQRES 25 B 464 SER GLN ALA LEU GLY ALA LEU GLY HIS GLY PHE THR GLY SEQRES 26 B 464 SER GLY HIS PRO VAL ALA THR ALA VAL ALA LEU GLU ASN SEQRES 27 B 464 LEU LYS ILE ILE GLU GLU GLU SER LEU VAL GLU HIS ALA SEQRES 28 B 464 ALA GLN MET GLY GLN LEU LEU ARG SER GLY LEU GLN HIS SEQRES 29 B 464 PHE ILE ASP HIS PRO LEU VAL GLY GLU ILE ARG GLY CYS SEQRES 30 B 464 GLY LEU ILE ALA ALA VAL GLU LEU VAL GLY ASP ARG VAL SEQRES 31 B 464 SER LYS ALA PRO TYR GLN ALA LEU GLY THR LEU GLY ARG SEQRES 32 B 464 TYR MET ALA GLY ARG ALA GLN GLU HIS GLY MET ILE THR SEQRES 33 B 464 ARG ALA MET GLY ASP ALA VAL ALA PHE CYS PRO PRO LEU SEQRES 34 B 464 ILE VAL ASN GLU GLN GLU VAL GLY MET ILE VAL GLU ARG SEQRES 35 B 464 PHE ALA ARG ALA LEU ASP ASP THR THR GLN TRP VAL GLY SEQRES 36 B 464 PRO GLY GLY HIS HIS HIS HIS HIS HIS HET PMP A 501 16 HET GOL A 502 6 HET PLP B 501 15 HETNAM PMP 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE HETNAM GOL GLYCEROL HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PMP PYRIDOXAMINE-5'-PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PMP C8 H13 N2 O5 P FORMUL 4 GOL C3 H8 O3 FORMUL 5 PLP C8 H10 N O6 P FORMUL 6 HOH *288(H2 O) HELIX 1 AA1 SER A 7 GLN A 16 1 10 HELIX 2 AA2 ASN A 22 GLY A 30 1 9 HELIX 3 AA3 MET A 54 SER A 59 1 6 HELIX 4 AA4 ASN A 66 LEU A 80 1 15 HELIX 5 AA5 HIS A 91 MET A 104 1 14 HELIX 6 AA6 SER A 117 LEU A 136 1 20 HELIX 7 AA7 THR A 155 THR A 162 1 8 HELIX 8 AA8 LEU A 164 GLN A 168 5 5 HELIX 9 AA9 HIS A 185 ALA A 190 1 6 HELIX 10 AB1 SER A 195 GLY A 215 1 21 HELIX 11 AB2 THR A 239 TYR A 251 1 13 HELIX 12 AB3 PHE A 271 PHE A 276 1 6 HELIX 13 AB4 SER A 286 SER A 290 5 5 HELIX 14 AB5 ASN A 302 LEU A 316 1 15 HELIX 15 AB6 HIS A 328 GLU A 345 1 18 HELIX 16 AB7 SER A 346 GLN A 363 1 18 HELIX 17 AB8 HIS A 364 ILE A 366 5 3 HELIX 18 AB9 GLY A 399 HIS A 412 1 14 HELIX 19 AC1 ASN A 432 GLY A 455 1 24 HELIX 20 AC2 SER B 7 GLN B 16 1 10 HELIX 21 AC3 ASN B 22 GLY B 30 1 9 HELIX 22 AC4 MET B 54 SER B 59 1 6 HELIX 23 AC5 ASN B 66 LEU B 80 1 15 HELIX 24 AC6 HIS B 91 MET B 104 1 14 HELIX 25 AC7 SER B 117 LEU B 136 1 20 HELIX 26 AC8 THR B 155 THR B 162 1 8 HELIX 27 AC9 LEU B 164 GLN B 168 5 5 HELIX 28 AD1 HIS B 185 ALA B 190 1 6 HELIX 29 AD2 SER B 195 GLY B 215 1 21 HELIX 30 AD3 THR B 239 TYR B 251 1 13 HELIX 31 AD4 PHE B 271 PHE B 276 1 6 HELIX 32 AD5 SER B 286 SER B 290 5 5 HELIX 33 AD6 ASN B 302 LEU B 316 1 15 HELIX 34 AD7 HIS B 328 GLU B 345 1 18 HELIX 35 AD8 SER B 346 GLN B 363 1 18 HELIX 36 AD9 HIS B 364 ILE B 366 5 3 HELIX 37 AE1 GLY B 399 HIS B 412 1 14 HELIX 38 AE2 ASN B 432 GLY B 455 1 24 SHEET 1 AA1 5 MET A 414 ILE A 415 0 SHEET 2 AA1 5 GLY A 49 GLU A 52 1 N ILE A 51 O ILE A 415 SHEET 3 AA1 5 TYR A 41 ASP A 44 -1 N VAL A 42 O TYR A 50 SHEET 4 AA1 5 LEU A 32 GLU A 38 -1 N GLU A 38 O TYR A 41 SHEET 5 AA1 5 LYS B 89 SER B 90 1 O SER B 90 N ILE A 34 SHEET 1 AA2 5 LYS A 89 SER A 90 0 SHEET 2 AA2 5 LEU B 32 GLU B 38 1 O ILE B 34 N SER A 90 SHEET 3 AA2 5 TYR B 41 ASP B 44 -1 O TYR B 41 N GLU B 38 SHEET 4 AA2 5 GLY B 49 GLU B 52 -1 O TYR B 50 N VAL B 42 SHEET 5 AA2 5 MET B 414 ILE B 415 1 O ILE B 415 N ILE B 51 SHEET 1 AA3 7 LYS A 111 THR A 115 0 SHEET 2 AA3 7 ALA A 297 ILE A 301 -1 O ALA A 297 N THR A 115 SHEET 3 AA3 7 ILE A 282 LEU A 285 -1 N LEU A 285 O ALA A 298 SHEET 4 AA3 7 LEU A 254 ASP A 258 1 N ALA A 257 O ILE A 282 SHEET 5 AA3 7 ILE A 219 GLY A 224 1 N PHE A 222 O ILE A 256 SHEET 6 AA3 7 LYS A 143 ARG A 147 1 N ILE A 145 O ALA A 221 SHEET 7 AA3 7 PHE A 178 VAL A 181 1 O LEU A 179 N SER A 146 SHEET 1 AA4 4 VAL A 371 CYS A 377 0 SHEET 2 AA4 4 ILE A 380 LEU A 385 -1 O GLU A 384 N GLU A 373 SHEET 3 AA4 4 ALA A 422 PHE A 425 -1 O PHE A 425 N ALA A 381 SHEET 4 AA4 4 ALA A 418 MET A 419 -1 N MET A 419 O ALA A 422 SHEET 1 AA5 7 LYS B 111 THR B 115 0 SHEET 2 AA5 7 ALA B 297 ILE B 301 -1 O ILE B 299 N PHE B 113 SHEET 3 AA5 7 ILE B 282 LEU B 285 -1 N MET B 283 O LEU B 300 SHEET 4 AA5 7 LEU B 254 ASP B 258 1 N ALA B 257 O ILE B 282 SHEET 5 AA5 7 ILE B 219 GLY B 224 1 N PHE B 222 O ILE B 256 SHEET 6 AA5 7 LYS B 143 ARG B 147 1 N ILE B 145 O ALA B 221 SHEET 7 AA5 7 PHE B 178 VAL B 181 1 O LEU B 179 N SER B 146 SHEET 1 AA6 4 VAL B 371 CYS B 377 0 SHEET 2 AA6 4 ILE B 380 LEU B 385 -1 O GLU B 384 N GLU B 373 SHEET 3 AA6 4 ALA B 422 PHE B 425 -1 O VAL B 423 N VAL B 383 SHEET 4 AA6 4 ALA B 418 MET B 419 -1 N MET B 419 O ALA B 422 LINK NZ LYS B 287 C4A PLP B 501 1555 1555 1.53 CISPEP 1 LEU A 173 PRO A 174 0 6.53 CISPEP 2 LEU B 173 PRO B 174 0 3.83 SITE 1 AC1 16 SER A 117 GLY A 118 SER A 119 TYR A 151 SITE 2 AC1 16 HIS A 152 GLU A 225 ASP A 258 VAL A 260 SITE 3 AC1 16 ILE A 261 LYS A 287 HOH A 610 HOH A 639 SITE 4 AC1 16 HOH A 656 HOH A 661 PHE B 323 THR B 324 SITE 1 AC2 5 ARG A 169 GLU A 433 HOH A 701 ASN B 134 SITE 2 AC2 5 VAL B 390 SITE 1 AC3 15 THR A 324 SER B 117 GLY B 118 SER B 119 SITE 2 AC3 15 TYR B 151 HIS B 152 GLU B 225 ASP B 258 SITE 3 AC3 15 VAL B 260 ILE B 261 LYS B 287 HOH B 624 SITE 4 AC3 15 HOH B 629 HOH B 649 HOH B 681 CRYST1 97.562 97.562 119.372 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008377 0.00000