HEADER LIGASE 28-MAR-18 6G4Q TITLE STRUCTURE OF HUMAN ADP-FORMING SUCCINYL-COA LIGASE COMPLEX SUCLG1- TITLE 2 SUCLA2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINATE--COA LIGASE [ADP/GDP-FORMING] SUBUNIT ALPHA, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: SUCCINYL-COA SYNTHETASE SUBUNIT ALPHA,SCS-ALPHA; COMPND 6 EC: 6.2.1.4,6.2.1.5; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, COMPND 10 MITOCHONDRIAL; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: ATP-SPECIFIC SUCCINYL-COA SYNTHETASE SUBUNIT BETA,A-SCS, COMPND 13 SUCCINYL-COA SYNTHETASE BETA-A CHAIN,SCS-BETAA; COMPND 14 EC: 6.2.1.5; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUCLG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SUCLA2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, SUCCINYL-COA LIGASE, MITOCHONDRIAL, ATP-SPECIFIC, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.BAILEY,L.SHRESTHA,E.REMBEZA,F.J.SORRELL,J.NEWMAN,C.STRAIN- AUTHOR 2 DAMERELL,N.BURGESS-BROWN,F.VON DELFT,C.ARROWSMITH,A.EDWARDS, AUTHOR 3 C.BOUNTRA,W.W.YUE REVDAT 2 17-JAN-24 6G4Q 1 COMPND HETNAM REVDAT 1 11-APR-18 6G4Q 0 JRNL AUTH H.J.BAILEY,L.SHRESTHA,E.REMBEZA,F.J.SORRELL, JRNL AUTH 2 C.STRAIN-DAMERELL,N.BURGESS-BROWN,C.ARROWSMITH,A.EDWARDS, JRNL AUTH 3 C.BOUNTRA,W.W.YUE JRNL TITL STRUCTURE OF HUMAN ADP-FORMING SUCCINYL-COA LIGASE COMPLEX JRNL TITL 2 SUCLG1-SUCLA2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 36407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.650 REMARK 3 FREE R VALUE TEST SET COUNT : 1693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.1206 - 5.9259 1.00 3080 144 0.1959 0.2447 REMARK 3 2 5.9259 - 4.7040 1.00 2974 153 0.1895 0.2024 REMARK 3 3 4.7040 - 4.1095 1.00 2933 153 0.1484 0.1751 REMARK 3 4 4.1095 - 3.7338 1.00 2929 152 0.1744 0.2362 REMARK 3 5 3.7338 - 3.4662 1.00 2910 149 0.1890 0.2460 REMARK 3 6 3.4662 - 3.2618 0.99 2886 146 0.2123 0.2927 REMARK 3 7 3.2618 - 3.0985 0.99 2895 123 0.2462 0.2901 REMARK 3 8 3.0985 - 2.9636 0.98 2853 148 0.2636 0.3477 REMARK 3 9 2.9636 - 2.8495 0.99 2876 126 0.2984 0.3649 REMARK 3 10 2.8495 - 2.7512 0.97 2838 137 0.3250 0.4010 REMARK 3 11 2.7512 - 2.6651 0.96 2814 126 0.3589 0.4384 REMARK 3 12 2.6651 - 2.5890 0.94 2726 136 0.3943 0.4628 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.0874 -17.0207 30.3693 REMARK 3 T TENSOR REMARK 3 T11: 0.8341 T22: 0.3382 REMARK 3 T33: 0.4224 T12: 0.0212 REMARK 3 T13: -0.1107 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 8.2935 L22: 3.0966 REMARK 3 L33: 3.7525 L12: 0.5253 REMARK 3 L13: -3.5914 L23: -0.0358 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: -0.0990 S13: -0.8638 REMARK 3 S21: -0.2881 S22: 0.1943 S23: -0.0891 REMARK 3 S31: 0.9014 S32: -0.0024 S33: -0.1248 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.3549 -9.5939 33.5097 REMARK 3 T TENSOR REMARK 3 T11: 0.7106 T22: 0.4168 REMARK 3 T33: 0.4374 T12: -0.0709 REMARK 3 T13: -0.0299 T23: 0.0993 REMARK 3 L TENSOR REMARK 3 L11: 5.3561 L22: 2.9361 REMARK 3 L33: 4.7661 L12: 2.0551 REMARK 3 L13: -1.2469 L23: -1.4541 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.3241 S13: -0.2805 REMARK 3 S21: -0.0647 S22: 0.2522 S23: 0.2870 REMARK 3 S31: 0.6177 S32: -0.6601 S33: -0.2330 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -62.0468 -15.6107 17.2162 REMARK 3 T TENSOR REMARK 3 T11: 0.7101 T22: 0.3122 REMARK 3 T33: 0.4981 T12: -0.0634 REMARK 3 T13: -0.0848 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 2.1196 L22: 2.8863 REMARK 3 L33: 5.4541 L12: -0.9867 REMARK 3 L13: 0.4224 L23: 0.1976 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: 0.1159 S13: -0.4193 REMARK 3 S21: -0.0933 S22: -0.0008 S23: 0.4006 REMARK 3 S31: 0.5125 S32: -0.0731 S33: -0.1841 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.3425 -14.8350 14.6169 REMARK 3 T TENSOR REMARK 3 T11: 0.6098 T22: 0.5090 REMARK 3 T33: 0.4107 T12: 0.0558 REMARK 3 T13: -0.0837 T23: -0.1175 REMARK 3 L TENSOR REMARK 3 L11: 3.3272 L22: 3.7281 REMARK 3 L33: 6.5407 L12: -1.2635 REMARK 3 L13: 0.2339 L23: -0.0414 REMARK 3 S TENSOR REMARK 3 S11: 0.2022 S12: 0.2547 S13: -0.2425 REMARK 3 S21: 0.1797 S22: 0.0305 S23: -0.2326 REMARK 3 S31: 0.5245 S32: 0.9629 S33: -0.2265 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 274 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.5536 -4.6374 8.7835 REMARK 3 T TENSOR REMARK 3 T11: 0.5954 T22: 0.4986 REMARK 3 T33: 0.3472 T12: -0.1581 REMARK 3 T13: 0.0142 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 5.8958 L22: 7.4457 REMARK 3 L33: 5.8835 L12: -4.0062 REMARK 3 L13: 2.8013 L23: -5.4394 REMARK 3 S TENSOR REMARK 3 S11: 0.4637 S12: 0.4063 S13: 0.0470 REMARK 3 S21: -0.6668 S22: -0.3858 S23: 0.0083 REMARK 3 S31: -0.4088 S32: 0.4869 S33: -0.1165 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.4450 -9.5482 2.5878 REMARK 3 T TENSOR REMARK 3 T11: 0.7611 T22: 0.6512 REMARK 3 T33: 0.4156 T12: 0.0281 REMARK 3 T13: -0.0327 T23: -0.1637 REMARK 3 L TENSOR REMARK 3 L11: 2.9052 L22: 4.7984 REMARK 3 L33: 4.9671 L12: -2.2750 REMARK 3 L13: -1.4730 L23: -2.4840 REMARK 3 S TENSOR REMARK 3 S11: 0.5000 S12: 0.3831 S13: 0.1758 REMARK 3 S21: -0.5113 S22: -0.1263 S23: -0.1544 REMARK 3 S31: -0.0971 S32: 0.5705 S33: -0.3610 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 332 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): -54.1978 -24.5932 0.8601 REMARK 3 T TENSOR REMARK 3 T11: 1.0593 T22: 0.5709 REMARK 3 T33: 0.7006 T12: 0.0853 REMARK 3 T13: -0.2051 T23: -0.2021 REMARK 3 L TENSOR REMARK 3 L11: 9.8185 L22: 3.6137 REMARK 3 L33: 4.8022 L12: -3.4724 REMARK 3 L13: 2.2130 L23: -3.9586 REMARK 3 S TENSOR REMARK 3 S11: 0.9231 S12: 0.0037 S13: -0.3908 REMARK 3 S21: -0.6251 S22: -0.6057 S23: -0.7118 REMARK 3 S31: 0.4927 S32: 0.4949 S33: -0.4368 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.2350 25.0765 17.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.6226 T22: 0.6236 REMARK 3 T33: 0.5138 T12: -0.1152 REMARK 3 T13: 0.0371 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.3690 L22: 6.2321 REMARK 3 L33: 2.6262 L12: 0.7227 REMARK 3 L13: -1.6505 L23: -3.3287 REMARK 3 S TENSOR REMARK 3 S11: 0.0330 S12: 0.4509 S13: 0.1701 REMARK 3 S21: -0.0295 S22: 0.1259 S23: -0.1982 REMARK 3 S31: -0.0616 S32: -0.2114 S33: -0.1477 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 250 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): -70.0851 4.1090 3.7245 REMARK 3 T TENSOR REMARK 3 T11: 0.6475 T22: 0.5063 REMARK 3 T33: 0.4929 T12: 0.0178 REMARK 3 T13: 0.0372 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 1.2563 L22: 1.7689 REMARK 3 L33: 3.2408 L12: 0.5188 REMARK 3 L13: 1.3678 L23: 1.2300 REMARK 3 S TENSOR REMARK 3 S11: 0.0794 S12: 0.0166 S13: 0.0224 REMARK 3 S21: -0.0614 S22: -0.1687 S23: 0.1465 REMARK 3 S31: -0.0539 S32: -0.4905 S33: 0.1866 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6G4Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36946 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 65.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1EUC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1M DL- MALIC ACID, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.92400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.84800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 79.84800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.92400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 40 REMARK 465 LEU A 346 REMARK 465 MET B 51 REMARK 465 ASN B 52 REMARK 465 ALA B 103 REMARK 465 GLY B 104 REMARK 465 GLY B 105 REMARK 465 ARG B 106 REMARK 465 GLN B 292 REMARK 465 ASP B 293 REMARK 465 TRP B 294 REMARK 465 THR B 295 REMARK 465 GLN B 296 REMARK 465 GLU B 297 REMARK 465 ASP B 298 REMARK 465 GLU B 299 REMARK 465 ARG B 300 REMARK 465 ASP B 301 REMARK 465 GLY B 380 REMARK 465 ILE B 381 REMARK 465 MET B 382 REMARK 465 ARG B 383 REMARK 465 TRP B 464 REMARK 465 GLN B 465 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 57 CE NZ REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 LYS A 90 CE NZ REMARK 470 HIS A 189 ND1 CD2 CE1 NE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 GLN A 272 CG CD OE1 NE2 REMARK 470 LYS A 308 CD CE NZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 GLU A 341 CG CD OE1 OE2 REMARK 470 ARG A 343 CZ NH1 NH2 REMARK 470 LYS A 344 CG CD CE NZ REMARK 470 LEU B 53 CG CD1 CD2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LEU B 102 CG CD1 CD2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 LEU B 115 CD1 CD2 REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 GLN B 134 CG CD OE1 NE2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 LEU B 140 CG CD1 CD2 REMARK 470 THR B 142 OG1 CG2 REMARK 470 LYS B 143 CG CD CE NZ REMARK 470 GLN B 144 CG CD OE1 NE2 REMARK 470 GLU B 147 CG CD OE1 OE2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 ARG B 150 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 164 NE CZ NH1 NH2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 GLU B 217 CG CD OE1 OE2 REMARK 470 LYS B 225 CG CD CE NZ REMARK 470 SER B 264 OG REMARK 470 LYS B 286 CG CD CE NZ REMARK 470 LYS B 302 CG CD CE NZ REMARK 470 ASP B 303 CG OD1 OD2 REMARK 470 LYS B 306 CG CD CE NZ REMARK 470 ASN B 308 CG OD1 ND2 REMARK 470 LYS B 362 CG CD CE NZ REMARK 470 SER B 366 OG REMARK 470 LYS B 368 CG CD CE NZ REMARK 470 LYS B 369 CG CD CE NZ REMARK 470 CYS B 384 SG REMARK 470 GLN B 389 CG CD OE1 NE2 REMARK 470 MET B 393 CG SD CE REMARK 470 LYS B 396 CG CD CE NZ REMARK 470 LEU B 398 CG CD1 CD2 REMARK 470 GLU B 399 CG CD OE1 OE2 REMARK 470 ARG B 412 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 413 CG1 CG2 REMARK 470 ASP B 414 CG OD1 OD2 REMARK 470 ASP B 415 CG OD1 OD2 REMARK 470 LYS B 417 CG CD CE NZ REMARK 470 ILE B 420 CG1 CG2 CD1 REMARK 470 ASP B 422 CG OD1 OD2 REMARK 470 LYS B 426 CG CD CE NZ REMARK 470 LYS B 458 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 235 -169.90 -105.84 REMARK 500 ASN A 274 59.76 -143.65 REMARK 500 LYS B 93 -119.96 -126.71 REMARK 500 ASN B 308 70.61 60.52 REMARK 500 ASN B 310 98.13 -69.21 REMARK 500 SER B 423 57.31 -142.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 501 DBREF 6G4Q A 42 346 UNP P53597 SUCA_HUMAN 42 346 DBREF 6G4Q B 52 463 UNP Q9P2R7 SUCB1_HUMAN 52 463 SEQADV 6G4Q SER A 40 UNP P53597 EXPRESSION TAG SEQADV 6G4Q MET A 41 UNP P53597 EXPRESSION TAG SEQADV 6G4Q MET B 51 UNP Q9P2R7 INITIATING METHIONINE SEQADV 6G4Q TRP B 464 UNP Q9P2R7 EXPRESSION TAG SEQADV 6G4Q GLN B 465 UNP Q9P2R7 EXPRESSION TAG SEQRES 1 A 307 SER MET SER TYR THR ALA SER ARG GLN HIS LEU TYR VAL SEQRES 2 A 307 ASP LYS ASN THR LYS ILE ILE CYS GLN GLY PHE THR GLY SEQRES 3 A 307 LYS GLN GLY THR PHE HIS SER GLN GLN ALA LEU GLU TYR SEQRES 4 A 307 GLY THR LYS LEU VAL GLY GLY THR THR PRO GLY LYS GLY SEQRES 5 A 307 GLY GLN THR HIS LEU GLY LEU PRO VAL PHE ASN THR VAL SEQRES 6 A 307 LYS GLU ALA LYS GLU GLN THR GLY ALA THR ALA SER VAL SEQRES 7 A 307 ILE TYR VAL PRO PRO PRO PHE ALA ALA ALA ALA ILE ASN SEQRES 8 A 307 GLU ALA ILE GLU ALA GLU ILE PRO LEU VAL VAL CYS ILE SEQRES 9 A 307 THR GLU GLY ILE PRO GLN GLN ASP MET VAL ARG VAL LYS SEQRES 10 A 307 HIS LYS LEU LEU ARG GLN GLU LYS THR ARG LEU ILE GLY SEQRES 11 A 307 PRO ASN CYS PRO GLY VAL ILE ASN PRO GLY GLU CYS LYS SEQRES 12 A 307 ILE GLY ILE MET PRO GLY HIS ILE HIS LYS LYS GLY ARG SEQRES 13 A 307 ILE GLY ILE VAL SER ARG SER GLY THR LEU THR TYR GLU SEQRES 14 A 307 ALA VAL HIS GLN THR THR GLN VAL GLY LEU GLY GLN SER SEQRES 15 A 307 LEU CYS VAL GLY ILE GLY GLY ASP PRO PHE ASN GLY THR SEQRES 16 A 307 ASP PHE ILE ASP CYS LEU GLU ILE PHE LEU ASN ASP SER SEQRES 17 A 307 ALA THR GLU GLY ILE ILE LEU ILE GLY GLU ILE GLY GLY SEQRES 18 A 307 ASN ALA GLU GLU ASN ALA ALA GLU PHE LEU LYS GLN HIS SEQRES 19 A 307 ASN SER GLY PRO ASN SER LYS PRO VAL VAL SER PHE ILE SEQRES 20 A 307 ALA GLY LEU THR ALA PRO PRO GLY ARG ARG MET GLY NEP SEQRES 21 A 307 ALA GLY ALA ILE ILE ALA GLY GLY LYS GLY GLY ALA LYS SEQRES 22 A 307 GLU LYS ILE SER ALA LEU GLN SER ALA GLY VAL VAL VAL SEQRES 23 A 307 SER MET SER PRO ALA GLN LEU GLY THR THR ILE TYR LYS SEQRES 24 A 307 GLU PHE GLU LYS ARG LYS MET LEU SEQRES 1 B 415 MET ASN LEU SER LEU HIS GLU TYR MET SER MET GLU LEU SEQRES 2 B 415 LEU GLN GLU ALA GLY VAL SER VAL PRO LYS GLY TYR VAL SEQRES 3 B 415 ALA LYS SER PRO ASP GLU ALA TYR ALA ILE ALA LYS LYS SEQRES 4 B 415 LEU GLY SER LYS ASP VAL VAL ILE LYS ALA GLN VAL LEU SEQRES 5 B 415 ALA GLY GLY ARG GLY LYS GLY THR PHE GLU SER GLY LEU SEQRES 6 B 415 LYS GLY GLY VAL LYS ILE VAL PHE SER PRO GLU GLU ALA SEQRES 7 B 415 LYS ALA VAL SER SER GLN MET ILE GLY LYS LYS LEU PHE SEQRES 8 B 415 THR LYS GLN THR GLY GLU LYS GLY ARG ILE CYS ASN GLN SEQRES 9 B 415 VAL LEU VAL CYS GLU ARG LYS TYR PRO ARG ARG GLU TYR SEQRES 10 B 415 TYR PHE ALA ILE THR MET GLU ARG SER PHE GLN GLY PRO SEQRES 11 B 415 VAL LEU ILE GLY SER SER HIS GLY GLY VAL ASN ILE GLU SEQRES 12 B 415 ASP VAL ALA ALA GLU SER PRO GLU ALA ILE ILE LYS GLU SEQRES 13 B 415 PRO ILE ASP ILE GLU GLU GLY ILE LYS LYS GLU GLN ALA SEQRES 14 B 415 LEU GLN LEU ALA GLN LYS MET GLY PHE PRO PRO ASN ILE SEQRES 15 B 415 VAL GLU SER ALA ALA GLU ASN MET VAL LYS LEU TYR SER SEQRES 16 B 415 LEU PHE LEU LYS TYR ASP ALA THR MET ILE GLU ILE ASN SEQRES 17 B 415 PRO MET VAL GLU ASP SER ASP GLY ALA VAL LEU CYS MET SEQRES 18 B 415 ASP ALA LYS ILE ASN PHE ASP SER ASN SER ALA TYR ARG SEQRES 19 B 415 GLN LYS LYS ILE PHE ASP LEU GLN ASP TRP THR GLN GLU SEQRES 20 B 415 ASP GLU ARG ASP LYS ASP ALA ALA LYS ALA ASN LEU ASN SEQRES 21 B 415 TYR ILE GLY LEU ASP GLY ASN ILE GLY CYS LEU VAL ASN SEQRES 22 B 415 GLY ALA GLY LEU ALA MET ALA THR MET ASP ILE ILE LYS SEQRES 23 B 415 LEU HIS GLY GLY THR PRO ALA ASN PHE LEU ASP VAL GLY SEQRES 24 B 415 GLY GLY ALA THR VAL HIS GLN VAL THR GLU ALA PHE LYS SEQRES 25 B 415 LEU ILE THR SER ASP LYS LYS VAL LEU ALA ILE LEU VAL SEQRES 26 B 415 ASN ILE PHE GLY GLY ILE MET ARG CYS ASP VAL ILE ALA SEQRES 27 B 415 GLN GLY ILE VAL MET ALA VAL LYS ASP LEU GLU ILE LYS SEQRES 28 B 415 ILE PRO VAL VAL VAL ARG LEU GLN GLY THR ARG VAL ASP SEQRES 29 B 415 ASP ALA LYS ALA LEU ILE ALA ASP SER GLY LEU LYS ILE SEQRES 30 B 415 LEU ALA CYS ASP ASP LEU ASP GLU ALA ALA ARG MET VAL SEQRES 31 B 415 VAL LYS LEU SER GLU ILE VAL THR LEU ALA LYS GLN ALA SEQRES 32 B 415 HIS VAL ASP VAL LYS PHE GLN LEU PRO ILE TRP GLN MODRES 6G4Q NEP A 299 HIS MODIFIED RESIDUE HET NEP A 299 14 HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO B 501 4 HETNAM NEP N1-PHOSPHONOHISTIDINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 NEP C6 H10 N3 O5 P FORMUL 3 EDO 8(C2 H6 O2) FORMUL 11 HOH *82(H2 O) HELIX 1 AA1 SER A 42 TYR A 51 5 10 HELIX 2 AA2 GLY A 65 GLY A 79 1 15 HELIX 3 AA3 THR A 103 GLY A 112 1 10 HELIX 4 AA4 PRO A 121 ALA A 135 1 15 HELIX 5 AA5 PRO A 148 LEU A 160 1 13 HELIX 6 AA6 PRO A 187 HIS A 191 5 5 HELIX 7 AA7 GLY A 203 VAL A 216 1 14 HELIX 8 AA8 ASP A 235 ASN A 245 1 11 HELIX 9 AA9 ASN A 261 ASN A 274 1 14 HELIX 10 AB1 GLY A 310 ALA A 321 1 12 HELIX 11 AB2 GLN A 331 LYS A 342 1 12 HELIX 12 AB3 HIS B 56 ALA B 67 1 12 HELIX 13 AB4 SER B 79 LEU B 90 1 12 HELIX 14 AB5 SER B 124 GLN B 134 1 11 HELIX 15 AB6 ASN B 191 SER B 199 1 9 HELIX 16 AB7 LYS B 215 MET B 226 1 12 HELIX 17 AB8 PRO B 229 ASN B 231 5 3 HELIX 18 AB9 ILE B 232 TYR B 250 1 19 HELIX 19 AC1 SER B 279 GLN B 285 5 7 HELIX 20 AC2 LYS B 287 LEU B 291 5 5 HELIX 21 AC3 ASP B 303 ASN B 308 1 6 HELIX 22 AC4 GLY B 324 HIS B 338 1 15 HELIX 23 AC5 THR B 353 SER B 366 1 14 HELIX 24 AC6 ASP B 385 LEU B 398 1 14 HELIX 25 AC7 ARG B 412 ASP B 422 1 11 HELIX 26 AC8 ASP B 432 ALA B 453 1 22 SHEET 1 AA1 7 THR A 94 HIS A 95 0 SHEET 2 AA1 7 LEU A 98 PHE A 101 -1 O LEU A 98 N HIS A 95 SHEET 3 AA1 7 LYS A 81 THR A 86 1 N GLY A 85 O PHE A 101 SHEET 4 AA1 7 LYS A 57 GLN A 61 1 N ILE A 58 O VAL A 83 SHEET 5 AA1 7 ALA A 115 ILE A 118 1 O VAL A 117 N GLN A 61 SHEET 6 AA1 7 LEU A 139 CYS A 142 1 O VAL A 141 N SER A 116 SHEET 7 AA1 7 ARG A 166 ILE A 168 1 O ILE A 168 N CYS A 142 SHEET 1 AA2 7 CYS A 181 GLY A 184 0 SHEET 2 AA2 7 GLY A 174 ASN A 177 -1 N ASN A 177 O CYS A 181 SHEET 3 AA2 7 GLN A 220 GLY A 225 -1 O GLY A 225 N GLY A 174 SHEET 4 AA2 7 LYS A 193 SER A 200 1 N GLY A 194 O GLN A 220 SHEET 5 AA2 7 GLY A 251 GLU A 257 1 O GLY A 251 N GLY A 197 SHEET 6 AA2 7 VAL A 282 ALA A 287 1 O PHE A 285 N GLY A 256 SHEET 7 AA2 7 VAL A 324 VAL A 325 1 O VAL A 324 N SER A 284 SHEET 1 AA3 4 GLY B 74 ALA B 77 0 SHEET 2 AA3 4 VAL B 155 GLU B 159 -1 O VAL B 155 N ALA B 77 SHEET 3 AA3 4 VAL B 95 ALA B 99 -1 N LYS B 98 O LEU B 156 SHEET 4 AA3 4 VAL B 119 VAL B 122 -1 O LYS B 120 N ILE B 97 SHEET 1 AA4 3 THR B 110 PHE B 111 0 SHEET 2 AA4 3 LYS B 138 PHE B 141 -1 O PHE B 141 N THR B 110 SHEET 3 AA4 3 ARG B 150 CYS B 152 -1 O CYS B 152 N LYS B 138 SHEET 1 AA5 5 ILE B 203 PRO B 207 0 SHEET 2 AA5 5 GLY B 179 SER B 185 -1 N LEU B 182 O GLU B 206 SHEET 3 AA5 5 ARG B 165 GLU B 174 -1 N ALA B 170 O ILE B 183 SHEET 4 AA5 5 ALA B 252 GLU B 262 -1 O MET B 260 N TYR B 167 SHEET 5 AA5 5 VAL B 268 CYS B 270 -1 O LEU B 269 N VAL B 261 SHEET 1 AA6 5 ILE B 203 PRO B 207 0 SHEET 2 AA6 5 GLY B 179 SER B 185 -1 N LEU B 182 O GLU B 206 SHEET 3 AA6 5 ARG B 165 GLU B 174 -1 N ALA B 170 O ILE B 183 SHEET 4 AA6 5 ALA B 252 GLU B 262 -1 O MET B 260 N TYR B 167 SHEET 5 AA6 5 LYS B 274 PHE B 277 -1 O LYS B 274 N GLU B 256 SHEET 1 AA7 2 ASN B 310 GLY B 313 0 SHEET 2 AA7 2 ASN B 344 ASP B 347 -1 O PHE B 345 N ILE B 312 SHEET 1 AA8 4 ILE B 318 VAL B 322 0 SHEET 2 AA8 4 ALA B 372 PHE B 378 1 O ALA B 372 N GLY B 319 SHEET 3 AA8 4 VAL B 404 GLN B 409 1 O VAL B 405 N ILE B 373 SHEET 4 AA8 4 ILE B 427 CYS B 430 1 O LEU B 428 N VAL B 406 LINK C GLY A 298 N NEP A 299 1555 1555 1.33 LINK C NEP A 299 N ALA A 300 1555 1555 1.33 CISPEP 1 GLY A 169 PRO A 170 0 4.68 CISPEP 2 ASN B 258 PRO B 259 0 1.07 SITE 1 AC1 5 GLN A 61 GLY A 62 THR A 86 PRO A 88 SITE 2 AC1 5 GLU A 131 SITE 1 AC2 5 LYS A 156 GLY A 233 ASP A 235 ASP A 238 SITE 2 AC2 5 HOH A 530 SITE 1 AC3 5 GLY A 260 ASN A 261 ASN A 265 HOH A 513 SITE 2 AC3 5 ARG B 175 SITE 1 AC4 4 GLN A 212 GLN A 215 HOH A 519 GLU B 127 SITE 1 AC5 4 ALA A 126 ASN A 130 GLU A 134 ARG A 154 SITE 1 AC6 6 HIS A 49 TYR A 51 VAL A 52 THR A 56 SITE 2 AC6 6 THR A 114 PRO A 138 SITE 1 AC7 4 LYS A 105 GLU A 134 ALA A 135 GLN A 150 SITE 1 AC8 4 GLN B 65 VAL B 71 PRO B 72 GLY B 74 CRYST1 130.200 130.200 119.772 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007680 0.004434 0.000000 0.00000 SCALE2 0.000000 0.008869 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008349 0.00000